View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20479_low_37 (Length: 397)

Name: NF20479_low_37
Description: NF20479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20479_low_37
NF20479_low_37
[»] scaffold0449 (1 HSPs)
scaffold0449 (80-381)||(4004-4286)
[»] chr5 (39 HSPs)
chr5 (1-56)||(37722909-37722964)
chr5 (1-56)||(6634015-6634070)
chr5 (1-56)||(9764338-9764393)
chr5 (1-56)||(15374064-15374119)
chr5 (1-56)||(40643921-40643976)
chr5 (1-54)||(2721575-2721628)
chr5 (1-58)||(15804320-15804377)
chr5 (1-54)||(28828369-28828422)
chr5 (1-54)||(28828451-28828504)
chr5 (1-56)||(2316378-2316433)
chr5 (1-56)||(9764442-9764497)
chr5 (7-54)||(13243514-13243561)
chr5 (1-56)||(16515122-16515177)
chr5 (1-56)||(22303885-22303940)
chr5 (1-56)||(22766952-22767007)
chr5 (1-56)||(26281284-26281339)
chr5 (1-56)||(32390076-32390131)
chr5 (1-56)||(40090429-40090484)
chr5 (1-55)||(3563278-3563332)
chr5 (1-56)||(13243457-13243514)
chr5 (1-55)||(20523237-20523291)
chr5 (1-54)||(32389974-32390027)
chr5 (2-54)||(15804399-15804451)
chr5 (1-56)||(927302-927357)
chr5 (1-56)||(15373960-15374015)
chr5 (1-56)||(23091963-23092017)
chr5 (1-56)||(25935305-25935360)
chr5 (1-56)||(32250113-32250167)
chr5 (1-56)||(35379344-35379398)
chr5 (1-56)||(41762230-41762285)
chr5 (1-54)||(19533922-19533975)
chr5 (1-56)||(20523133-20523188)
chr5 (5-56)||(23092070-23092121)
chr5 (8-55)||(33245394-33245441)
chr5 (1-56)||(34982216-34982270)
chr5 (1-56)||(40809341-40809396)
chr5 (7-48)||(12991333-12991374)
chr5 (1-54)||(37145516-37145569)
chr5 (1-56)||(32470986-32471039)
[»] chr4 (34 HSPs)
chr4 (1-56)||(4896648-4896703)
chr4 (1-56)||(15660287-15660342)
chr4 (1-54)||(26250911-26250964)
chr4 (1-56)||(2125857-2125912)
chr4 (1-56)||(15660183-15660238)
chr4 (1-56)||(49111416-49111471)
chr4 (1-54)||(4896736-4896789)
chr4 (1-56)||(857343-857398)
chr4 (1-56)||(1107156-1107211)
chr4 (1-56)||(1112605-1112660)
chr4 (1-56)||(5715744-5715799)
chr4 (1-56)||(7352916-7352971)
chr4 (1-56)||(11040968-11041022)
chr4 (1-56)||(31473849-31473904)
chr4 (1-56)||(36455907-36455962)
chr4 (1-56)||(41498594-41498649)
chr4 (1-55)||(4441338-4441392)
chr4 (2-56)||(14982280-14982334)
chr4 (4-54)||(42844650-42844700)
chr4 (1-54)||(7352814-7352867)
chr4 (1-54)||(10127976-10128029)
chr4 (1-53)||(10633035-10633087)
chr4 (1-56)||(10128078-10128133)
chr4 (1-56)||(11348341-11348396)
chr4 (1-56)||(28845975-28846030)
chr4 (2-56)||(16516171-16516225)
chr4 (1-54)||(31742778-31742831)
chr4 (7-56)||(31742874-31742923)
chr4 (1-48)||(1539649-1539696)
chr4 (1-56)||(36456030-36456085)
chr4 (1-51)||(28845876-28845926)
chr4 (1-54)||(19461754-19461807)
chr4 (9-54)||(42542979-42543024)
chr4 (1-56)||(1107051-1107107)
[»] chr3 (37 HSPs)
chr3 (1-56)||(9129448-9129503)
chr3 (1-56)||(9137555-9137610)
chr3 (1-56)||(46429500-46429555)
chr3 (1-56)||(47284330-47284385)
chr3 (1-56)||(5415783-5415838)
chr3 (1-56)||(46672820-46672875)
chr3 (1-56)||(49457343-49457398)
chr3 (1-56)||(5415887-5415942)
chr3 (1-56)||(7302346-7302401)
chr3 (1-56)||(27251998-27252053)
chr3 (1-56)||(36398006-36398061)
chr3 (1-56)||(44436258-44436313)
chr3 (1-56)||(44692822-44692877)
chr3 (1-56)||(44692926-44692981)
chr3 (1-56)||(46001364-46001419)
chr3 (1-56)||(47767432-47767487)
chr3 (1-56)||(53129860-53129915)
chr3 (2-56)||(42005971-42006025)
chr3 (1-54)||(42130694-42130747)
chr3 (1-56)||(9129344-9129399)
chr3 (1-56)||(9137451-9137506)
chr3 (1-52)||(21307549-21307600)
chr3 (1-56)||(28092214-28092269)
chr3 (1-56)||(31189414-31189469)
chr3 (1-56)||(37054394-37054449)
chr3 (1-56)||(37321550-37321605)
chr3 (1-56)||(53470446-53470501)
chr3 (2-52)||(35279920-35279970)
chr3 (8-54)||(39215949-39215995)
chr3 (1-37)||(31070510-31070546)
chr3 (1-56)||(671636-671691)
chr3 (1-48)||(31070415-31070461)
chr3 (1-56)||(34088571-34088626)
chr3 (1-56)||(39110394-39110449)
chr3 (1-56)||(46635857-46635912)
chr3 (25-56)||(47284226-47284257)
chr3 (8-52)||(1146969-1147013)
[»] chr2 (30 HSPs)
chr2 (1-56)||(17180297-17180352)
chr2 (1-56)||(784897-784952)
chr2 (1-56)||(14365700-14365755)
chr2 (1-56)||(41461619-41461674)
chr2 (1-54)||(11532271-11532324)
chr2 (1-54)||(11793897-11793950)
chr2 (2-54)||(41461517-41461569)
chr2 (1-52)||(11684603-11684654)
chr2 (1-56)||(14365803-14365858)
chr2 (1-56)||(14537199-14537254)
chr2 (1-56)||(27033490-27033545)
chr2 (2-56)||(45094490-45094544)
chr2 (1-54)||(44256211-44256263)
chr2 (1-56)||(769036-769091)
chr2 (1-56)||(1583827-1583882)
chr2 (1-56)||(10244177-10244232)
chr2 (1-56)||(10480119-10480174)
chr2 (1-56)||(11141305-11141360)
chr2 (1-56)||(11716408-11716463)
chr2 (1-48)||(11716503-11716550)
chr2 (1-56)||(33189275-33189330)
chr2 (1-56)||(35047697-35047752)
chr2 (2-55)||(30751365-30751418)
chr2 (1-53)||(28740599-28740651)
chr2 (1-56)||(13017779-13017834)
chr2 (1-56)||(17905654-17905709)
chr2 (1-48)||(30698289-30698336)
chr2 (2-56)||(7228031-7228085)
chr2 (7-56)||(11981580-11981629)
chr2 (2-50)||(40026070-40026118)
[»] chr1 (38 HSPs)
chr1 (2-56)||(8224768-8224822)
chr1 (1-54)||(40264134-40264187)
chr1 (1-56)||(4038179-4038234)
chr1 (1-56)||(15034763-15034818)
chr1 (1-56)||(23536067-23536122)
chr1 (1-56)||(38277415-38277470)
chr1 (1-55)||(32573026-32573080)
chr1 (1-54)||(38277519-38277571)
chr1 (1-54)||(50005183-50005236)
chr1 (1-53)||(37036967-37037019)
chr1 (1-56)||(4038075-4038130)
chr1 (1-56)||(15034659-15034714)
chr1 (1-56)||(24273238-24273293)
chr1 (1-56)||(26501097-26501152)
chr1 (1-56)||(30190240-30190295)
chr1 (1-56)||(34756427-34756482)
chr1 (1-56)||(44410415-44410470)
chr1 (1-56)||(50005079-50005134)
chr1 (1-54)||(28632603-28632656)
chr1 (1-54)||(28745799-28745852)
chr1 (3-56)||(31166310-31166363)
chr1 (1-54)||(34756531-34756584)
chr1 (1-53)||(45565397-45565449)
chr1 (1-56)||(6470704-6470759)
chr1 (1-52)||(27804269-27804320)
chr1 (1-56)||(27935589-27935644)
chr1 (1-56)||(47165230-47165285)
chr1 (1-51)||(28745900-28745950)
chr1 (2-47)||(37448420-37448465)
chr1 (4-56)||(10166499-10166551)
chr1 (8-56)||(43623003-43623051)
chr1 (1-56)||(25889158-25889212)
chr1 (1-56)||(27804369-27804424)
chr1 (1-56)||(29446750-29446805)
chr1 (1-56)||(32287951-32288006)
chr1 (26-56)||(17502198-17502228)
chr1 (1-54)||(34003379-34003432)
chr1 (1-49)||(37447920-37447968)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-52)||(56378-56429)
[»] chr8 (31 HSPs)
chr8 (1-56)||(14800064-14800119)
chr8 (1-56)||(24044960-24045015)
chr8 (2-56)||(37268112-37268166)
chr8 (1-54)||(4156271-4156324)
chr8 (1-54)||(13404829-13404882)
chr8 (1-56)||(3853616-3853671)
chr8 (1-56)||(3858074-3858129)
chr8 (1-56)||(14991692-14991747)
chr8 (1-56)||(17110869-17110924)
chr8 (1-56)||(31807409-31807463)
chr8 (1-56)||(33902667-33902722)
chr8 (1-56)||(42711384-42711439)
chr8 (1-54)||(3853720-3853773)
chr8 (1-54)||(3858178-3858231)
chr8 (1-56)||(11744747-11744802)
chr8 (1-56)||(17110973-17111028)
chr8 (1-56)||(28324690-28324745)
chr8 (1-56)||(29257379-29257434)
chr8 (1-56)||(33377325-33377380)
chr8 (1-56)||(40046804-40046859)
chr8 (1-56)||(44889354-44889409)
chr8 (1-54)||(29482835-29482888)
chr8 (8-56)||(32626069-32626117)
chr8 (1-56)||(14239-14293)
chr8 (1-56)||(23011734-23011789)
chr8 (1-56)||(33986004-33986059)
chr8 (1-56)||(36103101-36103156)
chr8 (1-52)||(44346706-44346757)
chr8 (1-39)||(13404931-13404969)
chr8 (1-39)||(40046894-40046932)
chr8 (11-56)||(27322687-27322732)
[»] chr7 (34 HSPs)
chr7 (1-56)||(2057499-2057554)
chr7 (1-56)||(35776959-35777014)
chr7 (1-56)||(40110737-40110792)
chr7 (1-56)||(43955517-43955572)
chr7 (1-54)||(43955618-43955671)
chr7 (1-56)||(2057395-2057450)
chr7 (1-56)||(5644781-5644836)
chr7 (1-56)||(6498769-6498824)
chr7 (1-52)||(23455251-23455302)
chr7 (1-56)||(25189230-25189285)
chr7 (1-56)||(26162141-26162196)
chr7 (1-56)||(28539172-28539227)
chr7 (1-56)||(31632722-31632777)
chr7 (7-56)||(34398959-34399008)
chr7 (1-56)||(5644677-5644732)
chr7 (1-56)||(14603266-14603321)
chr7 (1-56)||(21635885-21635940)
chr7 (1-56)||(29065819-29065874)
chr7 (1-56)||(29065923-29065978)
chr7 (9-56)||(29195709-29195756)
chr7 (1-56)||(34388369-34388424)
chr7 (1-56)||(35455804-35455859)
chr7 (1-56)||(39342646-39342701)
chr7 (1-56)||(40110842-40110897)
chr7 (1-56)||(44915195-44915250)
chr7 (1-55)||(9784935-9784989)
chr7 (1-56)||(18789250-18789305)
chr7 (1-56)||(23548615-23548670)
chr7 (1-56)||(34388265-34388320)
chr7 (1-56)||(49052786-49052840)
chr7 (5-54)||(18926812-18926861)
chr7 (25-58)||(19865564-19865597)
chr7 (2-50)||(21635990-21636038)
chr7 (2-54)||(22391592-22391644)
[»] chr6 (13 HSPs)
chr6 (1-56)||(9285647-9285702)
chr6 (1-56)||(9763116-9763171)
chr6 (1-56)||(6919811-6919866)
chr6 (1-56)||(34244998-34245053)
chr6 (1-56)||(8574695-8574750)
chr6 (1-56)||(8574769-8574824)
chr6 (1-56)||(29889452-29889507)
chr6 (1-54)||(6919710-6919763)
chr6 (1-54)||(9763014-9763067)
chr6 (1-56)||(13487275-13487330)
chr6 (1-52)||(15299529-15299579)
chr6 (1-56)||(28918165-28918220)
chr6 (16-56)||(33733432-33733472)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-54)||(509-562)
scaffold1562 (1-56)||(405-460)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-54)||(2031-2084)
scaffold1158 (1-56)||(2133-2188)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-55)||(4516-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-55)||(5160-5214)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-54)||(82945-82998)
[»] scaffold0169 (1 HSPs)
scaffold0169 (1-56)||(4075-4130)
[»] scaffold0129 (1 HSPs)
scaffold0129 (7-54)||(19200-19247)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-56)||(41997-42052)
scaffold0009 (1-56)||(42082-42137)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-56)||(2867-2922)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-54)||(7153-7206)


Alignment Details
Target: scaffold0449 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 80 - 381
Target Start/End: Complemental strand, 4286 - 4004
Alignment:
Q  80 aaaagaaatggtatatataaat---ctcattactcccattatgatcgactacagctaccacatttctcatttcttctcctccctcaccatggctatctga 176  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||           
T  4286 aaaaaaaatggtatatataaattccctcattactcccattatgatcgactacagctaccacatttctcatttcttctcttccctcaccatggc------- 4194  T
Q  177 tacaaatgatatcactatcacaatccaaaaggtatgcattcttggcctttctgaggacttgaaagatgacattgagaaaatttcagtatacattcttggc 276  Q
                   |||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  4193 ---------------tatcacaacccaaaaggtatgcattcttggcctttctcaggacttgaaagatcacattgagaaaatttcagtatgcattcttggc 4109  T
Q  277 ctttgcatgagtttcttctcatatgaccctcccacatcagagatagtgaaagagtttacgatatttgctgcgtcgtcatttgtatgttacattctctcaa 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4108 ctttgcatgagtttcttctcatatgaccctcccacatcagagatagtgaaagagtttacgatatttgctgcgtcgtcatttgtatgttacattctctcaa 4009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37722909 - 37722964
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37722909 gaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6634070 - 6634015
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  6634070 gaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactct 6634015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9764393 - 9764338
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  9764393 gaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 9764338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15374064 - 15374119
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  15374064 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40643921 - 40643976
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  40643921 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 40643976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2721575 - 2721628
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  2721575 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15804377 - 15804320
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactctca 58  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||    
T  15804377 gaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactctca 15804320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28828422 - 28828369
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28828451 - 28828504
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  28828451 gaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2316433 - 2316378
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||| |||||||| |||||||| |||||| ||||||||||||||||    
T  2316433 gaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactct 2316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9764442 - 9764497
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||    
T  9764442 gaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 13243514 - 13243561
Alignment:
Q  7 cctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaacacact 13243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16515122 - 16515177
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||    
T  16515122 gaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactct 16515177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22303885 - 22303940
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  22303885 gaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22767007 - 22766952
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  22767007 gaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26281284 - 26281339
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  26281284 gaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32390076 - 32390131
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||| || |||||||||||||||    
T  32390076 gaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactct 32390131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40090429 - 40090484
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  40090429 gaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactct 40090484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3563332 - 3563278
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 55  Q
    ||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||    
T  3563332 gaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13243514 - 13243457
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatc--caaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactct 13243457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20523237 - 20523291
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 55  Q
    |||||||||||||||||||||||  ||||||| |||||| |||||||||||||||    
T  20523237 gaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32390027 - 32389974
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||||||||||| |||||||| | |||||| |||||||||||||||||||||    
T  32390027 gaattccctcaaaatattacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 15804399 - 15804451
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||||||||||||||||||| |||||||| ||| || ||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 927357 - 927302
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| |||||| |||||||| ||| || ||||||||||||||||    
T  927357 gaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactct 927302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15374015 - 15373960
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  15374015 gaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23092017 - 23091963
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  23092017 gaattccttcaaaacattacattccctcaaaatattccc-catcaaaacacactct 23091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25935305 - 25935360
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  25935305 gaatttcctcataacattacattccctcaaaacattcccccatccaaacacactct 25935360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32250113 - 32250167
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||| || |||||||| |||||| ||||||||||||||||    
T  32250113 gaattccctcaaaacattactttccctcaaaacattccc-catccaaacacactct 32250167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35379398 - 35379344
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  35379398 gaattccctcaaaacattacattatctcaaaacattccc-catccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41762230 - 41762285
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  41762230 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 41762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19533922 - 19533975
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||| ||||||||||| |||||||| |||||  ||||||||||||||    
T  19533922 gaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20523188 - 20523133
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||| || |||||||| |||||||| |||| | ||||||||||||||||    
T  20523188 gaattccctcagaatattacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 23092070 - 23092121
Alignment:
Q  5 tccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||   |||||| |||||| ||||||||||||||||    
T  23092070 tccctcaaaacattacattcgttcaaaacattcccccatccaaacacactct 23092121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 33245394 - 33245441
Alignment:
Q  8 ctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 55  Q
    |||||||||||||||| | |||||| |||||| |||||||||||||||    
T  33245394 ctcaaaacattacattccatcaaaacattcccccatccaaacacactc 33245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34982270 - 34982216
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||| ||||| |||||||| ||||||  |||||||||||||||    
T  34982270 gaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactct 34982216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40809396 - 40809341
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||| |||  ||||||| ||| || ||||||||||||||||    
T  40809396 gaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactct 40809341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 12991333 - 12991374
Alignment:
Q  7 cctcaaaacattacattgcctcaaaatattccctcatccaaa 48  Q
    |||||||||||||| || |||||||| |||||||||||||||    
T  12991333 cctcaaaacattactttacctcaaaacattccctcatccaaa 12991374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37145516 - 37145569
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||| |||| ||||||||||| |||||||| |||||| ||||||||| ||||    
T  37145516 gaattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32470986 - 32471039
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||||  || ||| || ||||||||||||||||    
T  32470986 gaattccctcaaaacattacattccctc--aagatttccacatccaaacacactct 32471039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4896703 - 4896648
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  4896703 gaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15660287 - 15660342
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  15660287 gaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26250964 - 26250911
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26250964 gaatttcctcaaaacattacattacctcaaaatattccctcatccaaacacact 26250911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2125912 - 2125857
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||    
T  2125912 gaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15660238 - 15660183
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  15660238 gaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 15660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49111416 - 49111471
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  49111416 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4896736 - 4896789
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  4896736 gaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 4896789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 857343 - 857398
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||| || ||||||||||||||||    
T  857343 gaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1107156 - 1107211
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  1107156 gaattccctcaaaacattatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1112660 - 1112605
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||    
T  1112660 gaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactct 1112605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5715799 - 5715744
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  5715799 gaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactct 5715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7352916 - 7352971
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||| || ||||||||||||||||    
T  7352916 gaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 7352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11041022 - 11040968
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  11041022 gaattctctcaaaacattacattccctcaaaatattccc-catccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31473904 - 31473849
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  31473904 gaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36455962 - 36455907
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  36455962 gaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41498594 - 41498649
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  41498594 gaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactct 41498649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4441392 - 4441338
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 55  Q
    ||||||||||||||||||||||| |||||||| |||||  |||||||||||||||    
T  4441392 gaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 14982334 - 14982280
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  14982334 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 42844650 - 42844700
Alignment:
Q  4 ttccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  42844650 ttccctcaaaacattacattacctcaaaatatttccccatccaaacacact 42844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7352867 - 7352814
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||    
T  7352867 gaattccatcaaaacattacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10128029 - 10127976
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||| ||||||||||||||| | ||||||||||||| ||||||||||||||    
T  10128029 gaattccttcaaaacattacattacttcaaaatattcccccatccaaacacact 10127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10633087 - 10633035
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 53  Q
    ||||||||||| ||||||||||| |||||||| |||||| |||||||||||||    
T  10633087 gaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10128078 - 10128133
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||  ||||||| |||||| |||||||| |||||||    
T  10128078 gaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactct 10128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11348341 - 11348396
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||||| |||||||    
T  11348341 gaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28845975 - 28846030
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||| ||| |||||||| ||| || ||||||||||||||||    
T  28845975 gaattccctcaaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 16516225 - 16516171
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| ||||||||||||||| | |||||| |||||| ||||||||||||||||    
T  16516225 aattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31742831 - 31742778
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||| | ||| ||||||||||  ||||||||||||||    
T  31742831 gaattccctcaaaacattacactaccttaaaatattcctccatccaaacacact 31742778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 31742874 - 31742923
Alignment:
Q  7 cctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacactct 31742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1539696 - 1539649
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 48  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||    
T  1539696 gaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36456030 - 36456085
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| |||||||| |||||||| |||||||| |||||  ||||||||||||||||    
T  36456030 gaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactct 36456085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28845926 - 28845876
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacac 51  Q
    |||||||||| |||||||||||| |||||||| |||||  |||||||||||    
T  28845926 gaattccctcgaaacattacattccctcaaaacattcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19461754 - 19461807
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||| |||||||||||||||| | |||||||||| || |||||||| |||||    
T  19461754 gaattcgctcaaaacattacattacttcaaaatatttccccatccaaaaacact 19461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 42542979 - 42543024
Alignment:
Q  9 tcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||| |||||||| |||||  ||||||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1107107 - 1107051
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaata-ttccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| ||| |||| | || |||||||||||||||||||    
T  1107107 gaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacactct 1107051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9129448 - 9129503
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  9129448 gaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 9129503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9137555 - 9137610
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  9137555 gaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 9137610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46429500 - 46429555
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46429500 gaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47284330 - 47284385
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  47284330 gaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5415838 - 5415783
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  5415838 gaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactct 5415783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46672820 - 46672875
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  46672820 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49457398 - 49457343
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  49457398 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49457343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5415887 - 5415942
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||    
T  5415887 gaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7302401 - 7302346
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| |||||||||||||||  ||||||| |||||||||||||||||||||||    
T  7302401 gaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactct 7302346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27251998 - 27252053
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||    
T  27251998 gaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactct 27252053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36398006 - 36398061
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  36398006 gaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44436313 - 44436258
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  44436313 gaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 44436258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44692877 - 44692822
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||| || |||||||| |||||| ||||||||||||||||    
T  44692877 gaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44692926 - 44692981
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  44692926 gaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 44692981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46001419 - 46001364
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||    
T  46001419 gaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactct 46001364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47767487 - 47767432
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  47767487 gaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53129860 - 53129915
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||    
T  53129860 gaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactct 53129915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 42005971 - 42006025
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  42005971 aattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 42006025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42130747 - 42130694
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||  ||||||||||||||| || |||||||||||    
T  42130747 gaattccctcaaaacattacatcacctcaaaatattcccccacccaaacacact 42130694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9129399 - 9129344
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| |||||||||| || | ||||||||||||||||    
T  9129399 gaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactct 9129344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9137506 - 9137451
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| |||||||||| || | ||||||||||||||||    
T  9137506 gaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactct 9137451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21307549 - 21307600
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 52  Q
    ||||||||||||||||||||||| || ||||| |||||| ||||||||||||    
T  21307549 gaattccctcaaaacattacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28092269 - 28092214
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||| ||||| |||||||| |||||| |||||||||| |||||    
T  28092269 gaattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31189414 - 31189469
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| |||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  31189414 gaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactct 31189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37054449 - 37054394
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  37054449 gaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37321605 - 37321550
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| |||||||||||||| || ||||||||||||||| |||||||| |||||||    
T  37321605 gaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactct 37321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53470446 - 53470501
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| || ||| |||||||| ||| |||||||||||||||||||    
T  53470446 gaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactct 53470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 35279920 - 35279970
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 52  Q
    ||||| |||||||||||||||| |||||||| |||||| ||||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacaca 35279970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 39215949 - 39215995
Alignment:
Q  8 ctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  39215949 ctcaaaacattatattacctcaaaatattctctcatccaaacacact 39215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31070510 - 31070546
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattc 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31070510 gaattccctcaaaacattacattacctcaaaatattc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 671636 - 671691
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| |||||| |||||||| ||||||  ||||||| |||||||    
T  671636 gaattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactct 671691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31070461 - 31070415
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 48  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  31070461 gaattccctcaaaacattacattccctcaaaacattccc-catccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34088626 - 34088571
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| |||||| |||||||| ||| |  ||||||||||||||||    
T  34088626 gaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactct 34088571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39110449 - 39110394
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||| ||||||||||||||  ||||||| ||| | |||||||||||||||||    
T  39110449 gaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46635912 - 46635857
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| |||||||||||||||||  ||||||| |||  ||||||||||||||||||    
T  46635912 gaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacactct 46635857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 47284226 - 47284257
Alignment:
Q  25 cctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||||||||||||    
T  47284226 cctcaaaatattccctcatccaaacacactct 47284257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 1146969 - 1147013
Alignment:
Q  8 ctcaaaacattacattgcctcaaaatattccctcatccaaacaca 52  Q
    ||||||| ||||||||  |||||||||||||||||| ||||||||    
T  1146969 ctcaaaaaattacattagctcaaaatattccctcattcaaacaca 1147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17180352 - 17180297
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  17180352 gaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 17180297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 784897 - 784952
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  784897 gaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14365755 - 14365700
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  14365755 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 14365700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41461619 - 41461674
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  41461619 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11532271 - 11532324
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  11532271 gaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11793950 - 11793897
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  11793950 gaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 41461569 - 41461517
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  41461569 aattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 41461517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11684654 - 11684603
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 52  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  11684654 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacaca 11684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14365803 - 14365858
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  14365803 gaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14537254 - 14537199
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  14537254 gaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 14537199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27033545 - 27033490
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  27033545 gaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactct 27033490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 45094490 - 45094544
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||    
T  45094490 aattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44256211 - 44256263
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  44256211 gaattccctcaaaacattacattacctc-aaatattcccccatccaaacacact 44256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 769091 - 769036
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  769091 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1583827 - 1583882
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  1583827 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10244232 - 10244177
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||| || ||||| ||||||| | ||||||||||||||||    
T  10244232 gaattccctcaaaacattactttccctcagaatattctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10480174 - 10480119
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||  ||||||||||| |||||||| |||||| ||||||||||||||||    
T  10480174 gaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 10480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11141360 - 11141305
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  11141360 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 11141305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11716463 - 11716408
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  11716463 gaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11716503 - 11716550
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 48  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  11716503 gaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33189275 - 33189330
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  33189275 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 33189330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35047697 - 35047752
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  35047697 gaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 30751365 - 30751418
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 55  Q
    ||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  30751365 aattcactcaaaacattacattatctcaaaacattctctcatccaaacacactc 30751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28740651 - 28740599
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 53  Q
    ||||||||||||||||||||||| |||||||| ||| || ||| |||||||||    
T  28740651 gaattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13017834 - 13017779
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||| |||||||| |||||||| ||| || ||||||||||||||||    
T  13017834 gaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17905709 - 17905654
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| | |||||||||||||  ||||||| |||||||||||| ||||||||||    
T  17905709 gaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactct 17905654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30698336 - 30698289
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 48  Q
    ||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  30698336 gaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 7228031 - 7228085
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| |||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  7228031 aattccttcaaaacattacattctctcaaaacatttccccatccaaacacactct 7228085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 11981580 - 11981629
Alignment:
Q  7 cctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||| ||  |||||||||  |||||||||||||||||    
T  11981580 cctcaaaacattacattaccctaaaatattctttcatccaaacacactct 11981629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 40026118 - 40026070
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaaca 50  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  40026118 aatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 8224822 - 8224768
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  8224822 aattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 8224768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40264134 - 40264187
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  40264134 gaattccctcaaaacattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4038179 - 4038234
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  4038179 gaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15034763 - 15034818
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  15034763 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23536122 - 23536067
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  23536122 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 23536067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38277470 - 38277415
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  38277470 gaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactct 38277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32573026 - 32573080
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 55  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  32573026 gaattccctcaaaacattacattacctcaaaatattcccccatccaatcacactc 32573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38277519 - 38277571
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  38277519 gaattccctcaaaacattacattacctcaaaatattccc-catccaaacacact 38277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50005183 - 50005236
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  50005183 gaattccctcaaaacattacattacctcaaaatattcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37036967 - 37037019
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 53  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  37036967 gaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4038130 - 4038075
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| || |||||||||||||    
T  4038130 gaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactct 4038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15034714 - 15034659
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  15034714 gaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 15034659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24273238 - 24273293
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  24273238 gaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26501097 - 26501152
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  26501097 gaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 26501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30190240 - 30190295
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  30190240 gaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34756482 - 34756427
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||    
T  34756482 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctct 34756427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44410415 - 44410470
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||| ||||||| |||||||||||||||  |||||||||||||||    
T  44410415 gaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactct 44410470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50005134 - 50005079
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  50005134 gaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactct 50005079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28632603 - 28632656
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||| |||||||||||||||| |||| ||| |||||||||||||||||||||    
T  28632603 gaattctctcaaaacattacattccctccaaacattccctcatccaaacacact 28632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28745852 - 28745799
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||    
T  28745852 gaattccctcaaaccattacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 31166363 - 31166310
Alignment:
Q  3 attccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| |||||||||||||||  ||||||| |||||||||||||||||||||||    
T  31166363 attccatcaaaacattacattatctcaaaacattccctcatccaaacacactct 31166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34756531 - 34756584
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||| ||| |||||||||||| || ||||||||||||||    
T  34756531 gaattccctcaaaacattatattacctcaaaatatttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45565449 - 45565397
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 53  Q
    |||||||||||||||||||||||  ||||||| |||||| |||||||||||||    
T  45565449 gaattccctcaaaacattacattctctcaaaacattcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6470704 - 6470759
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||  ||||||| |||||  ||||||||||||||||    
T  6470704 gaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27804320 - 27804269
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 52  Q
    |||||||||||||| |||||||| |||||||| |||||| ||||||||||||    
T  27804320 gaattccctcaaaatattacattccctcaaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27935589 - 27935644
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||||||||||||||||| |||||||||||| |  ||||||||||||||||    
T  27935589 gaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactct 27935644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47165230 - 47165285
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||| |  ||||||||||||||||    
T  47165230 gaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28745900 - 28745950
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacac 51  Q
    |||||||||||||| |||||||| ||| ||||||||| |||||||||||||    
T  28745900 gaattccctcaaaatattacattcccttaaaatattctctcatccaaacac 28745950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 37448420 - 37448465
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaa 47  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  37448420 aattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 10166551 - 10166499
Alignment:
Q  4 ttccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||| ||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  10166551 ttccttcaaaacattacattaccacaaaacattctctcatccaaacacactct 10166499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 43623003 - 43623051
Alignment:
Q  8 ctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| | |||||| |||||| ||||||||||||||||    
T  43623003 ctcaaaacattacattccatcaaaacattcccccatccaaacacactct 43623051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25889212 - 25889158
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||| || |||||||    
T  25889212 gaattccttcaaaacatta-attacctcaaaatattccctcatcccaatacactct 25889158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27804369 - 27804424
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| || |||||||||||| |||||||| |||||  ||||||||||||||||    
T  27804369 gaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactct 27804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29446805 - 29446750
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| | |||||| |||||| | | ||||||||||||    
T  29446805 gaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactct 29446750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32287951 - 32288006
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||||||||||||||||| ||||||||  ||||  ||||||||||||||||    
T  32287951 gaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactct 32288006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 56
Target Start/End: Complemental strand, 17502228 - 17502198
Alignment:
Q  26 ctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||||||||||    
T  17502228 ctcaaaatattccctcatccaaacacactct 17502198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34003432 - 34003379
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||| ||||||||| |||| ||||| | ||||||||| ||||||||||||||||    
T  34003432 gaatgccctcaaaatattatattgctttaaaatattcactcatccaaacacact 34003379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37447920 - 37447968
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaac 49  Q
    ||||||| ||||||||||||||| |||| ||||||||||  ||||||||    
T  37447920 gaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 56378 - 56429
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 52  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  56378 gaattccctcaaaacattactttccctcaaaatattccctcatccaaacaca 56429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14800064 - 14800119
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  14800064 gaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24045015 - 24044960
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||    
T  24045015 gaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 37268112 - 37268166
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  37268112 aattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4156271 - 4156324
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  4156271 gaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13404882 - 13404829
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  13404882 gaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3853671 - 3853616
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  3853671 gaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3858129 - 3858074
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  3858129 gaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14991747 - 14991692
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  14991747 gaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactct 14991692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17110924 - 17110869
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||| || ||||||||||||||||    
T  17110924 gaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 17110869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31807463 - 31807409
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  31807463 gaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33902722 - 33902667
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  33902722 gaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42711384 - 42711439
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||||||  |||||||||||||||    
T  42711384 gaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactct 42711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3853720 - 3853773
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||||||| |||||||||||| |||||||||||| || ||||||||||||||    
T  3853720 gaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3858178 - 3858231
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||||||| |||||||||||| |||||||||||| || ||||||||||||||    
T  3858178 gaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11744747 - 11744802
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||| ||||||||||| |||| |||||||| ||||||||||||||||||    
T  11744747 gaattccttcacaacattacattccctctaaatattctctcatccaaacacactct 11744802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17110973 - 17111028
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||| |  ||||||||||||||||    
T  17110973 gaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28324690 - 28324745
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| ||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  28324690 gaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29257379 - 29257434
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  29257379 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33377325 - 33377380
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| || ||| |||||||| |||||| ||||||||||||||||    
T  33377325 gaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactct 33377380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40046859 - 40046804
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  40046859 gaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 40046804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44889409 - 44889354
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||| ||| |||||||| |||||  ||||||||||||||||    
T  44889409 gaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29482835 - 29482888
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    |||||||||||||||| ||| || |||||||| |||||| ||||||||||||||    
T  29482835 gaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 32626069 - 32626117
Alignment:
Q  8 ctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| |||||||| |||||| ||||||| ||||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactct 32626117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14293 - 14239
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| ||||||||||||| |||| ||| |||||| ||||||||||||||||    
T  14293 gaattcccttaaaacattacattccctccaaacattccc-catccaaacacactct 14239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23011789 - 23011734
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||| ||||||||||| |||||||| |||| | | ||||||||||||||    
T  23011789 gaattccctcataacattacattccctcaaaacattctcccgtccaaacacactct 23011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33986059 - 33986004
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| |||||||||||||||| | |||| | |||||| ||||||||||||||||    
T  33986059 gaattctctcaaaacattacattacttcaagacattcccccatccaaacacactct 33986004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36103156 - 36103101
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||| ||||||||||||| |||||||| |||||  ||||||||||||||||    
T  36103156 gaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 36103101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44346706 - 44346757
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 52  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||    
T  44346706 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13404931 - 13404969
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccc 39  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  13404931 gaattccctcaaaacattacattccctcaaaacattccc 13404969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40046894 - 40046932
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccc 39  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  40046894 gaattccctcaaaacattacattacctcaaaacattccc 40046932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 27322687 - 27322732
Alignment:
Q  11 aaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||| |||||||| |||| | ||||||||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactct 27322732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2057499 - 2057554
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  2057499 gaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35776959 - 35777014
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  35776959 gaattccctcataacattacattccctcaaaacattccctcatccaaacacactct 35777014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40110792 - 40110737
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  40110792 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 40110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43955572 - 43955517
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  43955572 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 43955517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43955618 - 43955671
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  43955618 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2057450 - 2057395
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  2057450 gaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactct 2057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5644781 - 5644836
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  5644781 gaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6498769 - 6498824
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  6498769 gaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23455251 - 23455302
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 52  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  23455251 gaattccctcaaaacaatacattccctcaaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25189230 - 25189285
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||| |||| |||||||| |||||| ||||||||||||||||    
T  25189230 gaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactct 25189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26162141 - 26162196
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  26162141 gaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28539172 - 28539227
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  28539172 gaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31632777 - 31632722
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  31632777 gaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 34398959 - 34399008
Alignment:
Q  7 cctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  34398959 cctcaaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5644732 - 5644677
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||    
T  5644732 gaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 5644677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14603266 - 14603321
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  14603266 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 14603321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21635940 - 21635885
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||| |||||||||||||||||| ||||||||||||| | ||||||| ||||||||    
T  21635940 gaatcccctcaaaacattacattacctcaaaatattctcccatccaagcacactct 21635885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29065874 - 29065819
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  29065874 gaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 29065819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29065923 - 29065978
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||| |||| |||||  ||||||||||||||||    
T  29065923 gaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 29195756 - 29195709
Alignment:
Q  9 tcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactct 29195709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34388369 - 34388424
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||| |||||||| |||||||| ||||| |||| ||||||||||||    
T  34388369 gaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35455859 - 35455804
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  35455859 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39342646 - 39342701
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  39342646 gaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 39342701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40110842 - 40110897
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||| ||| ||| || ||||||||||||||||    
T  40110842 gaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactct 40110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44915250 - 44915195
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||| |||||||||||| || |||||||| |||| ||||||||||||||||||    
T  44915250 gaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactct 44915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9784935 - 9784989
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 55  Q
    |||||||||||||||| |||||| |||||||| |||||  |||||||||||||||    
T  9784935 gaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18789250 - 18789305
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||| ||||||| |||  |||||||||||||  ||||||||||||||||    
T  18789250 gaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23548615 - 23548670
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| |||||||||| |||||| |||||||| |||||  ||||||||||||||||    
T  23548615 gaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34388320 - 34388265
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| |||| |||||||| || |||||||||||| || ||||||||||||||||    
T  34388320 gaattctctcagaacattacttttcctcaaaatatttccccatccaaacacactct 34388265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49052840 - 49052786
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| |||||||||||||||| |||||||| |||  ||||||||||||||||||    
T  49052840 gaattcactcaaaacattacatt-cctcaaaacattttctcatccaaacacactct 49052786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 18926812 - 18926861
Alignment:
Q  5 tccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||| ||||||||| | ||| |||| |||||||||    
T  18926812 tccctcaaaacattacattacctcaaaatgtccccccatcaaaacacact 18926861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 19865564 - 19865597
Alignment:
Q  25 cctcaaaatattccctcatccaaacacactctca 58  Q
    |||||||| |||||||||||||||||||||||||    
T  19865564 cctcaaaacattccctcatccaaacacactctca 19865597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 21635990 - 21636038
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaaca 50  Q
    |||||| ||||||||||||||| |||||||| ||| || ||||||||||    
T  21635990 aattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 22391592 - 22391644
Alignment:
Q  2 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||| |||||||||||||||| |||||||| |||  ||||| ||||||||||    
T  22391592 aattctctcaaaacattacattccctcaaaacattatctcattcaaacacact 22391644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9285702 - 9285647
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  9285702 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9763116 - 9763171
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  9763116 gaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactct 9763171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6919811 - 6919866
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||| || |||||||| |||||| ||||||||||||||||    
T  6919811 gaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 6919866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34244998 - 34245053
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  34244998 gaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 34245053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8574750 - 8574695
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  8574750 gaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8574769 - 8574824
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  8574769 gaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29889452 - 29889507
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| | |||||| |||||  ||||||||||||||||    
T  29889452 gaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6919763 - 6919710
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||  |||||  ||||||||||||||    
T  6919763 gaattccctcaaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9763067 - 9763014
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||| ||| || | ||||||||||||    
T  9763067 gaattccctcaaaacattacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13487330 - 13487275
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||| |||| |||||| |||||||| |||||| |||| |||||||||||    
T  13487330 gaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15299529 - 15299579
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 52  Q
    ||||||| ||||||||||||||| |||||||| |||||| ||||||||||||    
T  15299529 gaattccttcaaaacattacattccctcaaaacattccc-catccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28918220 - 28918165
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||| ||| ||||||||||||| |||||||| |||||  ||||||||||||||||    
T  28918220 gaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 28918165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  16 attacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||| |||||||| |||||| ||||||||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 509 - 562
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  509 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 460 - 405
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||  || ||||||||||||||| ||||||||||||||||    
T  460 gaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2084 - 2031
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  2084 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2133 - 2188
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||  || ||||||||||||||| ||||||||||||||||    
T  2133 gaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 2188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4516 - 4570
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 55  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  4516 gaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5160 - 5214
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 55  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  5160 gaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 82998 - 82945
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||||||||| |||||||| |||| | ||||||||||||||    
T  82998 gaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4130 - 4075
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||  ||||||| ||||| | |||||||||||||||    
T  4130 gaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactct 4075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 19247 - 19200
Alignment:
Q  7 cctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  19247 cctcaaaacattacattccctcaaaatactcccccatccaaacacact 19200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42052 - 41997
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    ||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||    
T  42052 gaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42082 - 42137
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||| |||||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  42082 gaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 42137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2922 - 2867
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 56  Q
    |||||||||||||||||||||||  ||| ||| |||||| |||| |||||||||||    
T  2922 gaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

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Target: scaffold0301 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7206 - 7153
Alignment:
Q  1 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 54  Q
    ||||||||| |||||| |||||| |||||||| |||||  ||||||||||||||    
T  7206 gaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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