View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20479_low_80 (Length: 266)

Name: NF20479_low_80
Description: NF20479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20479_low_80
NF20479_low_80
[»] chr3 (55 HSPs)
chr3 (8-248)||(22405435-22405675)
chr3 (120-224)||(10040556-10040659)
chr3 (112-248)||(25294935-25295071)
chr3 (102-241)||(54237430-54237569)
chr3 (117-207)||(19146977-19147067)
chr3 (112-224)||(51060277-51060389)
chr3 (117-248)||(29762156-29762287)
chr3 (117-224)||(34662320-34662427)
chr3 (102-248)||(6462387-6462533)
chr3 (107-248)||(53649702-53649843)
chr3 (117-206)||(7650244-7650333)
chr3 (103-247)||(29127895-29128039)
chr3 (117-205)||(54261244-54261332)
chr3 (102-201)||(3507519-3507618)
chr3 (138-241)||(3755552-3755655)
chr3 (103-242)||(29135894-29136033)
chr3 (103-216)||(28572198-28572311)
chr3 (117-206)||(31072895-31072984)
chr3 (102-201)||(3136680-3136779)
chr3 (146-241)||(3763033-3763127)
chr3 (112-206)||(13893943-13894037)
chr3 (112-199)||(47219168-47219255)
chr3 (139-242)||(47303512-47303615)
chr3 (141-248)||(49543494-49543601)
chr3 (117-247)||(7328820-7328949)
chr3 (103-205)||(15320204-15320306)
chr3 (150-248)||(15795528-15795625)
chr3 (140-201)||(30045843-30045904)
chr3 (152-216)||(4638161-4638225)
chr3 (117-216)||(48342027-48342126)
chr3 (102-186)||(49021189-49021273)
chr3 (148-248)||(52364832-52364932)
chr3 (112-211)||(928612-928711)
chr3 (140-207)||(7648756-7648823)
chr3 (137-224)||(30767268-30767355)
chr3 (102-168)||(36043660-36043726)
chr3 (112-201)||(26361963-26362052)
chr3 (140-201)||(35923647-35923708)
chr3 (137-242)||(49198332-49198437)
chr3 (102-174)||(7310689-7310761)
chr3 (137-201)||(8164575-8164639)
chr3 (102-200)||(15084931-15085029)
chr3 (117-224)||(22909783-22909889)
chr3 (112-174)||(19873421-19873483)
chr3 (150-248)||(42412808-42412906)
chr3 (137-199)||(43330753-43330815)
chr3 (121-199)||(50405608-50405686)
chr3 (150-203)||(39849091-39849144)
chr3 (117-242)||(45877435-45877560)
chr3 (112-200)||(26043835-26043923)
chr3 (117-216)||(26590267-26590366)
chr3 (103-199)||(34374429-34374525)
chr3 (117-201)||(45450448-45450532)
chr3 (117-201)||(47471853-47471937)
chr3 (121-201)||(55069684-55069764)
[»] chr4 (48 HSPs)
chr4 (117-240)||(40780861-40780984)
chr4 (117-248)||(38166007-38166138)
chr4 (117-248)||(42722577-42722708)
chr4 (117-205)||(2559330-2559418)
chr4 (102-206)||(4738640-4738744)
chr4 (119-248)||(1940779-1940905)
chr4 (117-248)||(29895767-29895898)
chr4 (117-201)||(7246646-7246730)
chr4 (146-248)||(1446806-1446908)
chr4 (137-211)||(5472868-5472942)
chr4 (122-240)||(8889010-8889128)
chr4 (117-211)||(43458630-43458724)
chr4 (103-248)||(53599040-53599185)
chr4 (112-201)||(49260660-49260749)
chr4 (137-241)||(7741912-7742016)
chr4 (102-242)||(36145200-36145340)
chr4 (137-216)||(6779223-6779302)
chr4 (117-216)||(16450312-16450411)
chr4 (112-247)||(20128290-20128425)
chr4 (137-224)||(20532429-20532516)
chr4 (112-203)||(38168282-38168372)
chr4 (117-248)||(47078438-47078569)
chr4 (117-224)||(52950086-52950193)
chr4 (117-207)||(14859312-14859402)
chr4 (112-206)||(18531541-18531635)
chr4 (118-248)||(21429281-21429411)
chr4 (117-247)||(38075414-38075544)
chr4 (117-211)||(47682382-47682475)
chr4 (121-207)||(48317279-48317365)
chr4 (118-203)||(295534-295619)
chr4 (112-224)||(13073542-13073654)
chr4 (117-216)||(14124028-14124127)
chr4 (117-216)||(43468359-43468458)
chr4 (117-216)||(55921046-55921145)
chr4 (141-199)||(55703776-55703834)
chr4 (121-206)||(3159473-3159558)
chr4 (112-200)||(33647749-33647837)
chr4 (137-201)||(3507297-3507361)
chr4 (151-211)||(14077963-14078023)
chr4 (137-201)||(36262787-36262851)
chr4 (117-248)||(49952145-49952277)
chr4 (150-201)||(17080070-17080121)
chr4 (138-248)||(27248408-27248516)
chr4 (137-216)||(30317245-30317324)
chr4 (146-201)||(42722408-42722463)
chr4 (150-224)||(3574479-3574553)
chr4 (152-201)||(48015108-48015157)
chr4 (140-248)||(41162905-41163013)
[»] chr8 (30 HSPs)
chr8 (102-248)||(2467103-2467249)
chr8 (138-242)||(22958755-22958859)
chr8 (117-226)||(43032902-43033011)
chr8 (117-201)||(4479296-4479380)
chr8 (101-201)||(15884540-15884640)
chr8 (102-205)||(10927628-10927731)
chr8 (137-240)||(36914453-36914556)
chr8 (112-241)||(6100458-6100587)
chr8 (137-216)||(18374021-18374100)
chr8 (117-216)||(43027316-43027415)
chr8 (102-208)||(13357941-13358047)
chr8 (156-225)||(13359024-13359093)
chr8 (104-216)||(14846587-14846698)
chr8 (112-203)||(2964100-2964191)
chr8 (117-248)||(3418513-3418644)
chr8 (117-200)||(23895595-23895678)
chr8 (102-200)||(24837269-24837367)
chr8 (156-212)||(8586978-8587034)
chr8 (144-248)||(13085503-13085607)
chr8 (117-201)||(45521194-45521278)
chr8 (117-248)||(17981420-17981551)
chr8 (99-226)||(26570925-26571052)
chr8 (103-185)||(8803096-8803178)
chr8 (112-201)||(583838-583927)
chr8 (137-242)||(8141087-8141192)
chr8 (117-242)||(14666071-14666196)
chr8 (112-249)||(16893915-16894050)
chr8 (121-221)||(68102-68202)
chr8 (117-201)||(8997544-8997628)
chr8 (152-200)||(21174167-21174215)
[»] chr6 (34 HSPs)
chr6 (102-248)||(21898627-21898773)
chr6 (103-206)||(12606451-12606554)
chr6 (117-211)||(3601100-3601194)
chr6 (102-248)||(6606082-6606228)
chr6 (112-200)||(9633620-9633708)
chr6 (117-248)||(13036004-13036135)
chr6 (103-201)||(30788839-30788937)
chr6 (140-248)||(2271326-2271432)
chr6 (112-248)||(13468912-13469048)
chr6 (103-211)||(19089514-19089622)
chr6 (117-248)||(5253223-5253354)
chr6 (112-201)||(29444760-29444849)
chr6 (102-226)||(5029818-5029942)
chr6 (112-248)||(14107353-14107489)
chr6 (137-201)||(19230579-19230643)
chr6 (103-219)||(30410453-30410569)
chr6 (140-216)||(34954642-34954718)
chr6 (112-247)||(8932641-8932776)
chr6 (112-247)||(8944107-8944242)
chr6 (151-201)||(10396499-10396549)
chr6 (102-163)||(8149782-8149843)
chr6 (112-248)||(8611969-8612105)
chr6 (112-248)||(12635793-12635929)
chr6 (137-201)||(32157187-32157251)
chr6 (140-199)||(8888910-8888969)
chr6 (117-216)||(8938722-8938821)
chr6 (140-211)||(33940027-33940098)
chr6 (162-248)||(10311514-10311600)
chr6 (112-174)||(14783415-14783477)
chr6 (117-211)||(31129193-31129287)
chr6 (148-201)||(3587976-3588029)
chr6 (153-201)||(9366459-9366507)
chr6 (102-226)||(11142604-11142728)
chr6 (145-201)||(13391312-13391368)
[»] chr2 (56 HSPs)
chr2 (137-248)||(42770671-42770782)
chr2 (102-248)||(10823035-10823181)
chr2 (117-241)||(2550850-2550974)
chr2 (117-201)||(25540404-25540488)
chr2 (102-248)||(41220610-41220756)
chr2 (117-242)||(14169609-14169734)
chr2 (137-241)||(38962745-38962849)
chr2 (102-248)||(7747249-7747395)
chr2 (112-224)||(8410130-8410242)
chr2 (117-249)||(28616379-28616511)
chr2 (140-216)||(34722687-34722763)
chr2 (104-203)||(44945613-44945712)
chr2 (137-248)||(10026636-10026747)
chr2 (117-248)||(18902530-18902661)
chr2 (117-224)||(27725939-27726046)
chr2 (117-203)||(3643887-3643973)
chr2 (102-200)||(10669615-10669713)
chr2 (112-216)||(20612529-20612635)
chr2 (102-216)||(24179576-24179689)
chr2 (117-201)||(16813165-16813249)
chr2 (117-201)||(16852444-16852528)
chr2 (112-248)||(22593110-22593244)
chr2 (140-216)||(37560180-37560256)
chr2 (102-249)||(3811676-3811823)
chr2 (121-248)||(21286419-21286546)
chr2 (117-240)||(35946722-35946844)
chr2 (117-216)||(44139491-44139590)
chr2 (151-249)||(13026445-13026543)
chr2 (122-248)||(39201513-39201639)
chr2 (102-199)||(12455334-12455431)
chr2 (117-206)||(12864241-12864330)
chr2 (112-205)||(20116607-20116700)
chr2 (126-242)||(331482-331598)
chr2 (117-201)||(11069900-11069984)
chr2 (102-201)||(38005424-38005523)
chr2 (137-201)||(45263687-45263751)
chr2 (117-216)||(16325602-16325701)
chr2 (117-216)||(41031906-41032005)
chr2 (102-216)||(2528326-2528440)
chr2 (117-199)||(9360748-9360830)
chr2 (112-199)||(29653651-29653733)
chr2 (137-206)||(6358171-6358240)
chr2 (137-206)||(7787073-7787142)
chr2 (149-206)||(34356223-34356280)
chr2 (117-241)||(2784915-2785038)
chr2 (117-249)||(16034911-16035043)
chr2 (117-157)||(44023361-44023401)
chr2 (117-211)||(18649026-18649120)
chr2 (140-242)||(19976830-19976932)
chr2 (140-174)||(25549777-25549811)
chr2 (141-199)||(28525479-28525537)
chr2 (150-248)||(41187824-41187922)
chr2 (140-201)||(29422237-29422298)
chr2 (140-216)||(3848937-3849013)
chr2 (141-237)||(10106574-10106670)
chr2 (144-224)||(43303319-43303399)
[»] chr7 (40 HSPs)
chr7 (117-242)||(38578867-38578992)
chr7 (140-248)||(1797438-1797546)
chr7 (112-242)||(17748377-17748507)
chr7 (117-248)||(48804661-48804792)
chr7 (102-248)||(22993352-22993498)
chr7 (141-201)||(39474965-39475025)
chr7 (117-201)||(41945498-41945582)
chr7 (117-248)||(4195202-4195333)
chr7 (102-241)||(13095843-13095982)
chr7 (137-224)||(23658181-23658268)
chr7 (117-216)||(34659236-34659335)
chr7 (102-248)||(10047861-10048007)
chr7 (112-248)||(22973945-22974081)
chr7 (137-224)||(5039438-5039525)
chr7 (123-241)||(28396166-28396284)
chr7 (103-201)||(28744187-28744285)
chr7 (117-242)||(47341860-47341985)
chr7 (112-240)||(5069810-5069938)
chr7 (117-201)||(8734686-8734770)
chr7 (149-201)||(37514946-37514998)
chr7 (101-201)||(39420862-39420962)
chr7 (112-206)||(1605961-1606055)
chr7 (117-216)||(43346779-43346878)
chr7 (150-248)||(16802101-16802199)
chr7 (102-211)||(21530763-21530872)
chr7 (112-216)||(43861967-43862071)
chr7 (140-224)||(3353427-3353510)
chr7 (117-249)||(26423288-26423419)
chr7 (152-248)||(43925490-43925586)
chr7 (117-248)||(21190780-21190911)
chr7 (118-248)||(18785647-18785777)
chr7 (103-200)||(48551883-48551980)
chr7 (117-206)||(27028299-27028388)
chr7 (152-216)||(365150-365214)
chr7 (117-189)||(3603394-3603466)
chr7 (112-224)||(14650319-14650431)
chr7 (102-185)||(24983403-24983487)
chr7 (117-201)||(29805440-29805524)
chr7 (148-200)||(30827318-30827370)
chr7 (137-241)||(36619274-36619378)
[»] scaffold0029 (1 HSPs)
scaffold0029 (112-224)||(41046-41158)
[»] chr5 (53 HSPs)
chr5 (112-248)||(42086303-42086439)
chr5 (112-216)||(9805012-9805116)
chr5 (117-241)||(14588617-14588741)
chr5 (102-248)||(5731905-5732051)
chr5 (117-206)||(20682617-20682706)
chr5 (112-248)||(1538407-1538543)
chr5 (112-248)||(19572700-19572836)
chr5 (117-224)||(37263241-37263347)
chr5 (140-224)||(41800977-41801061)
chr5 (117-248)||(7866557-7866688)
chr5 (137-216)||(12081916-12081995)
chr5 (141-203)||(9168277-9168339)
chr5 (117-241)||(20525821-20525945)
chr5 (140-224)||(23247374-23247458)
chr5 (102-201)||(38897704-38897803)
chr5 (117-200)||(42291505-42291588)
chr5 (117-248)||(8513495-8513626)
chr5 (117-216)||(23383665-23383764)
chr5 (146-249)||(35638062-35638165)
chr5 (150-216)||(18262651-18262717)
chr5 (117-207)||(43399145-43399235)
chr5 (101-242)||(4016239-4016380)
chr5 (151-248)||(25417217-25417314)
chr5 (117-237)||(40117402-40117522)
chr5 (150-242)||(7308397-7308489)
chr5 (117-240)||(7336604-7336726)
chr5 (112-248)||(9812848-9812984)
chr5 (112-248)||(12766107-12766243)
chr5 (137-201)||(18294504-18294568)
chr5 (112-196)||(24499010-24499094)
chr5 (102-206)||(39099764-39099868)
chr5 (137-200)||(3653934-3653997)
chr5 (112-207)||(13664277-13664372)
chr5 (117-208)||(20255385-20255476)
chr5 (141-200)||(24463910-24463969)
chr5 (137-216)||(30995129-30995208)
chr5 (170-224)||(7736871-7736925)
chr5 (103-201)||(30349602-30349700)
chr5 (137-206)||(5079349-5079418)
chr5 (117-198)||(14728109-14728190)
chr5 (141-224)||(21487617-21487697)
chr5 (163-248)||(35403558-35403643)
chr5 (112-201)||(41163455-41163544)
chr5 (102-199)||(42861203-42861300)
chr5 (112-248)||(12704990-12705126)
chr5 (137-241)||(24653832-24653935)
chr5 (140-200)||(24875369-24875429)
chr5 (117-248)||(11845801-11845932)
chr5 (137-224)||(14974344-14974431)
chr5 (151-201)||(35006769-35006819)
chr5 (112-166)||(40773331-40773385)
chr5 (103-164)||(36783303-36783364)
chr5 (117-164)||(27648425-27648472)
[»] chr1 (47 HSPs)
chr1 (112-248)||(8763967-8764103)
chr1 (117-241)||(26325795-26325919)
chr1 (102-240)||(41663842-41663980)
chr1 (112-224)||(43959817-43959929)
chr1 (112-216)||(17642000-17642104)
chr1 (102-198)||(37339846-37339942)
chr1 (117-248)||(5855498-5855629)
chr1 (140-225)||(33498863-33498948)
chr1 (117-205)||(10422807-10422895)
chr1 (138-238)||(17092499-17092599)
chr1 (102-242)||(18915849-18915989)
chr1 (138-198)||(33418137-33418197)
chr1 (117-216)||(45361883-45361982)
chr1 (140-242)||(14254292-14254394)
chr1 (117-225)||(50371835-50371943)
chr1 (117-192)||(4581683-4581758)
chr1 (102-240)||(49078098-49078236)
chr1 (112-216)||(44969673-44969776)
chr1 (148-224)||(32871-32947)
chr1 (138-198)||(5063866-5063926)
chr1 (117-185)||(9659180-9659248)
chr1 (140-224)||(10336516-10336600)
chr1 (146-206)||(10507716-10507776)
chr1 (117-241)||(50503362-50503486)
chr1 (117-200)||(10172972-10173055)
chr1 (117-224)||(18649353-18649460)
chr1 (137-216)||(45726454-45726533)
chr1 (117-199)||(2567301-2567383)
chr1 (117-206)||(16263563-16263652)
chr1 (151-248)||(33004050-33004147)
chr1 (138-203)||(48761197-48761262)
chr1 (117-201)||(2980932-2981016)
chr1 (121-225)||(31576552-31576656)
chr1 (117-216)||(5504039-5504138)
chr1 (117-248)||(16956442-16956573)
chr1 (144-199)||(17988688-17988743)
chr1 (150-201)||(21849239-21849290)
chr1 (149-248)||(25178609-25178707)
chr1 (121-248)||(30927732-30927859)
chr1 (146-200)||(13262107-13262161)
chr1 (152-201)||(6563464-6563513)
chr1 (151-224)||(28324615-28324688)
chr1 (146-191)||(35908791-35908836)
chr1 (151-248)||(48798105-48798202)
chr1 (117-201)||(11397890-11397974)
chr1 (117-201)||(26660161-26660244)
chr1 (112-216)||(34697343-34697447)
[»] scaffold0011 (2 HSPs)
scaffold0011 (117-224)||(224319-224426)
scaffold0011 (117-191)||(186552-186626)
[»] scaffold0002 (3 HSPs)
scaffold0002 (103-201)||(319447-319545)
scaffold0002 (182-248)||(412091-412157)
scaffold0002 (117-248)||(548-679)
[»] scaffold0223 (1 HSPs)
scaffold0223 (117-216)||(16889-16988)
[»] scaffold0006 (1 HSPs)
scaffold0006 (119-248)||(68495-68621)
[»] scaffold0005 (1 HSPs)
scaffold0005 (150-224)||(271107-271181)
[»] scaffold0170 (1 HSPs)
scaffold0170 (137-206)||(9865-9934)
[»] scaffold0010 (1 HSPs)
scaffold0010 (112-211)||(155706-155805)
[»] scaffold0291 (1 HSPs)
scaffold0291 (117-216)||(6865-6964)
[»] scaffold0016 (1 HSPs)
scaffold0016 (117-216)||(8701-8800)
[»] scaffold0009 (1 HSPs)
scaffold0009 (117-200)||(42832-42915)
[»] scaffold0376 (1 HSPs)
scaffold0376 (117-205)||(12691-12779)
[»] scaffold0086 (1 HSPs)
scaffold0086 (146-206)||(26203-26263)
[»] scaffold0001 (1 HSPs)
scaffold0001 (150-201)||(65185-65236)
[»] scaffold0341 (1 HSPs)
scaffold0341 (152-201)||(18657-18706)
[»] scaffold0209 (1 HSPs)
scaffold0209 (112-201)||(12598-12687)
[»] scaffold0155 (1 HSPs)
scaffold0155 (117-201)||(19280-19364)
[»] scaffold0635 (1 HSPs)
scaffold0635 (141-237)||(2114-2210)


Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 22405435 - 22405675
Alignment:
Q  8 gagcagagatacaaagtaaaaggataatcaaacagttactatttgttggatgatcaaaacatgaagacattaaaagctagcatgaattccttcgtttttt 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22405435 gagcaaagatacaaagtaaaaggataatcaaacagttactatttgttggatgatgaaaacatgaagacattaaaagctagcatgaattccttcgtttttt 22405534  T
Q  108 attcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctga 207  Q
    |||||||||||| |||| |||||||  | |||||||||||||||| |||||||||||||||||| ||  || |||| ||   ||||||||||||||||||    
T  22405535 attcttgggttttgcactggtttccgacgcaccaaagatggacgattaatccggctcgtgcataaaggcattcgcattggttaagcgttgttcctcctga 22405634  T
Q  208 gaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||||||  || ||||||||| ||||||| ||||||||||    
T  22405635 gaatagaatccggtatttcacggatacgtcattggtaggag 22405675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 10040659 - 10040556
Alignment:
Q  120 cgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcg 219  Q
    |||||||||||||| | |||||||| |||||||| | |||||||||||| |||||  |||||||||| |||||||||||||| ||||||||| |||| ||    
T  10040659 cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc-cctgagaatcgaacccg 10040561  T
Q  220 atatt 224  Q
    |||||    
T  10040560 atatt 10040556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 25295071 - 25294935
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||| | |||||| | ||||||||||||||||||| |||||||||  |||||||||| ||||| |||||| | || ||||||    
T  25295071 ttggctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaat 25294972  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
      ||| || |||| | || |||||||||||| |||||    
T  25294971 caaacccggtattccccggatacgtccttggaaggag 25294935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 54237569 - 54237430
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | ||| || | ||||||||| ||||||||| ||| |||||| |||||||||||||||| |||||||     
T  54237569 ttttttctttttggctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttct 54237470  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttg 241  Q
     ||||| ||| || | ||||||||| || |||||||||||    
T  54237469 ccctgaaaatcgaccccgatatttcccggatacgtccttg 54237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 19147067 - 19146977
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctga 207  Q
    ||||||||||||||||  | |||||||| |||||||||||||| ||||||||||||||  || | ||||| ||||||||||||||||||||    
T  19147067 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttcctcctga 19146977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 51060277 - 51060389
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | |||||| | |||||||||||||| | || ||| |||||  |||||||||||||||| |||||||| |||||||||    
T  51060277 ttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaat 51060376  T
Q  212 agaactcgatatt 224  Q
     |||| |||||||    
T  51060377 cgaacccgatatt 51060389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 29762156 - 29762287
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||| | |||||||||||||| |||| |||||||||  |||||||||| ||||| |||||| | ||||||||| | ||    
T  29762156 tttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggac 29762255  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     ||||||| | || |||| ||||||| |||||    
T  29762256 ccgatattccccgaatacatccttggaaggag 29762287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 34662320 - 34662427
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||| |||||||||   ||| |||| |||||||||||| |||||| |||||||||| ||||| ||||||||| |||| |||||||||| ||| ||||    
T  34662320 tttcgcatcggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaac 34662419  T
Q  217 tcgatatt 224  Q
     |||||||    
T  34662420 ccgatatt 34662427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 248
Target Start/End: Complemental strand, 6462533 - 6462387
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||| | ||| ||  |||| ||||||||||||||| ||| |||||  |||||||||| |||||||||||||     
T  6462533 ttttttttttttggttttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttct 6462434  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| |||| |||| || |||| | |  |||||||||||| |||||    
T  6462433 ccctgtgaatcgaacccggtattccccagatacgtccttggaaggag 6462387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 53649843 - 53649702
Alignment:
Q  107 tattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcct 205  Q
    |||| |||| |||||||||||||||| ||| || ||||| || |||||||||||||||| ||| |||||| | |||||||| ||||| |||||||  |||    
T  53649843 tatttttggttttcgcaccggtttccgatc-catcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccct 53649745  T
Q  206 gagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    |||||| |||| || |||| | || |||||||||||| |||||    
T  53649744 gagaatcgaacccggtattccccgaatacgtccttggaaggag 53649702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 7650333 - 7650244
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    ||||||||||||||||| | |||||||| ||| ||||||||||||||||||| |||||| || || |||| ||||| |||||||| ||||    
T  7650333 tttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctg 7650244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 29128039 - 29127895
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcct 202  Q
    ||||| || |||| ||||||| ||||||||  | |||||||| ||| ||||||||||||||| ||| |||||  |||||||||||||||| |||||||      
T  29128039 tttttttttttggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctc 29127940  T
Q  203 cctgagaatagaactcgatatttcacgcatacgtccttggtagga 247  Q
    ||||  ||| |||| ||||||| | |  |||||||||||| ||||    
T  29127939 cctggaaatcgaacccgatattccccagatacgtccttggaagga 29127895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 54261332 - 54261244
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcct 205  Q
    ||||||||||||||||  | ||| |||| || |||||||||||||||| ||| |||||  |||||||||| ||||||||||||||||||    
T  54261332 tttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcct 54261244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 3507519 - 3507618
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | |||||||| ||  ||||||||||||||||||| |||||  |||||||||| ||||| ||||||||    
T  3507519 tttttttttgttggttttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttcc 3507618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 3755655 - 3755552
Alignment:
Q  138 accaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtc 237  Q
    ||||||| | ||||||||||||||||| ||| |||||| ||||||||||  ||| |||||||||||||| |||| ||| ||| |||| | || |||||||    
T  3755655 accaaaggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtc 3755556  T
Q  238 cttg 241  Q
    ||||    
T  3755555 cttg 3755552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 29136033 - 29135894
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcct 202  Q
    ||||| || |||| ||||| ||||||||||| | |||||| | |||| |||||||||||||| ||| |||||  |||||||||| ||||| ||||||||     
T  29136033 tttttttttttggctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccc 29135934  T
Q  203 cctgagaatagaactcgatatttcacgcatacgtccttgg 242  Q
    |||| |||| |||  || |||| | || ||||||||||||    
T  29135933 cctgggaatcgaatccggtattccccggatacgtccttgg 29135894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 28572198 - 28572311
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcct 202  Q
    ||||| || |||| ||||||||||||||||  | |||||||| ||| ||||||||||||||||||| |||||  ||||  |||| |||||||||||| |     
T  28572198 tttttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcc 28572297  T
Q  203 cctgagaatagaac 216  Q
    |||| |||| ||||    
T  28572298 cctgggaatcgaac 28572311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 31072984 - 31072895
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    ||||||||||||||||| |  ||||||| ||||||| ||||| || |||||| |||||  ||| ||||||||||||||||||||| ||||    
T  31072984 tttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctg 31072895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 3136680 - 3136779
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  |  ||||||| ||||||||||||||| ||| ||| |||||  |||||||||| ||||| ||||||||    
T  3136680 ttttttttttttggctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcc 3136779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 3763127 - 3763033
Alignment:
Q  146 tggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttg 241  Q
    |||||||||||||| | |||||| |||||| |||| ||||||||||||||||||||| ||| |||| |||  || |||||| || |||||||||||    
T  3763127 tggacgactaatccagttcgtgcgtagagacatgcacactgaccaagcgttgttcct-ctgtgaatcgaatccggtatttcccggatacgtccttg 3763033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 13894037 - 13893943
Alignment:
Q  112 ttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    |||| |||||||||||||| | ||| |||||||| ||| ||||||||||||||||||  |||||  ||||||| ||||||||||||||||| ||||    
T  13894037 ttggctttcgcaccggttttcgatc-caccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctg 13893943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 47219255 - 47219168
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    |||| ||||||||||||||||  | || ||||| ||||||||||||||||||| ||| |||||  |||||||||  ||||||||||||    
T  47219255 ttggctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtt 47219168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 47303512 - 47303615
Alignment:
Q  139 ccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtcc 238  Q
    |||||| | ||||||||||||||||| ||  |||||  ||| |||||||||||| ||||||||||||| ||||  ||| ||||||||  || ||||||||    
T  47303512 ccaaaggttgacgactaatccggctcatgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaacccgatattttccggatacgtcc 47303611  T
Q  239 ttgg 242  Q
    ||||    
T  47303612 ttgg 47303615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 248
Target Start/End: Complemental strand, 49543601 - 49543494
Alignment:
Q  141 aaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtcctt 240  Q
    |||| ||| |||||||| |||||||||| |||||  |||| |||||||||| ||||||||| | ||||||| |||| ||||||| |  | ||||||||||    
T  49543601 aaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattcccgggatacgtcctt 49543502  T
Q  241 ggtaggag 248  Q
    || |||||    
T  49543501 ggaaggag 49543494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 7328949 - 7328820
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||| |  | |||||||| ||| ||||||||||||||| ||| || ||  |||||||||| ||||| |||||||| |||| |||| ||||    
T  7328949 tttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaac 7328851  T
Q  217 tcgatatttcacgcatacgtccttggtagga 247  Q
     || |||||| ||  ||||||||||| ||||    
T  7328850 ccggtatttcccgggtacgtccttggaagga 7328820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 15320306 - 15320204
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcct 202  Q
    ||||| || |||| |||||||||||||||   | |||||||| ||| ||||||||||||||||||| |||||  |||| ||||| |||| | ||||||||    
T  15320306 tttttttttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcct 15320207  T
Q  203 cct 205  Q
    |||    
T  15320206 cct 15320204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 15795528 - 15795625
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    |||||||| | |||||||| |||||  ||||||||||||||||||||||||| |||| |||| ||||||| |||| | ||  ||||||||||| |||||    
T  15795528 cgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttcc-cctgggaatcgaactcggtattccccgggtacgtccttggaaggag 15795625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 30045904 - 30045843
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||| ||||||||||||| | ||||||| |||||| |||||||||| ||||||||||||||    
T  30045904 caaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttcc 30045843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 4638225 - 4638161
Alignment:
Q  152 actaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||| ||||| |||||||||||  ||||||||||| |||||| |||| ||||    
T  4638225 actaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaac 4638161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 48342126 - 48342027
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaa 215  Q
    ||||||||| |||||| ||| |||||||||||||||||||||| || || ||| |||||  |||||||||  |||||||||||||| |||  ||||||||    
T  48342126 tttcgcacctgtttccgatc-caccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaa 48342028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 49021189 - 49021273
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg 186  Q
    |||||| || |||| ||||||||||||||||  | |||||| | ||||||||||||||||||| ||| |||||  ||||||||||    
T  49021189 ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactg 49021273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 52364832 - 52364932
Alignment:
Q  148 gacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtagga 247  Q
    ||||| |||||| |||||||| |||||  ||||||||||  |||||||||||||| ||| |||| ||||||| |||| | ||  ||||||||||| ||||    
T  52364832 gacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgggtacgtccttggaagga 52364931  T
Q  248 g 248  Q
    |    
T  52364932 g 52364932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 928711 - 928612
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| |||||||||| ||| |  | |||||||| |||| |||||||||||||||||| ||| |  ||||||||||  |||| |||||||| |||||||||    
T  928711 ttggctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaat 928612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 7648823 - 7648756
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctga 207  Q
    ||||| ||| ||||||||||||||||||| ||||| |||||||||||  ||| ||||||||| |||||    
T  7648823 caaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgttccccctga 7648756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 30767268 - 30767355
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||||||| ||| ||||||||||||||||||| |||||  |||| ||||| ||||| |||||||| ||||  ||| |||| |||||||    
T  30767268 caccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatatt 30767355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 36043660 - 36043726
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgc 168  Q
    |||||| || |||| ||||||||||||||||  | |||||||| ||| |||||||||||||||||||    
T  36043660 ttttttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgc 36043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 26361963 - 26362052
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||| |||| |||||||||||  | || ||||| ||  ||||||||||||||||||| |||||  |||| |||||||||| |||||||||    
T  26361963 ttggctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttcc 26362052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 35923647 - 35923708
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||||||||||| || ||||||| |||||  |||||||||| |||| |||||||||    
T  35923647 caaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttcc 35923708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 49198437 - 49198332
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgt 236  Q
    |||||| | ||||||||||||||||||| ||| |||||  |||||||||| ||||| |||||||| |||  |||| |||| || |||| | || ||| ||    
T  49198437 caccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccggatatgt 49198338  T
Q  237 ccttgg 242  Q
    ||||||    
T  49198337 ccttgg 49198332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 7310689 - 7310761
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag 174  Q
    |||||| || |||| ||||||| ||||||||  | |||||||||||  ||||||||||||||||||| |||||    
T  7310689 ttttttttttttggctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagag 7310761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 8164639 - 8164575
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||| ||| ||||||||||| ||||||| || ||  |||||||||| ||||||||||||||    
T  8164639 caccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttcc 8164575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 15084931 - 15085029
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||||| || |||| |||| ||||||||||| ||| |||||||||| |||||||||||  |||||| | ||||| ||||| ||||| |||| ||||||||    
T  15084931 ttttttttttttggctttcacaccggtttccgatc-caccaaagatagacgactaatctagctcgtacgtagaggtatgcacactggccaaccgttgttc 15085029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 22909889 - 22909783
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| |||||||  | || ||||| || ||||||||| |||||| ||| ||||  ||||||||||  || |||||||||||| |||||||| ||||    
T  22909889 tttcgcactggtttccgacccatcaaaggtgcacgactaattcggctcatgcgtagaagtatgcgcactagcctagcgttgttcct-ctgagaatcgaac 22909791  T
Q  217 tcgatatt 224  Q
     |||||||    
T  22909790 ccgatatt 22909783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 19873483 - 19873421
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag 174  Q
    |||| ||| ||||| ||||||  | ||| |||||||||||||||||||||||||||| |||||    
T  19873483 ttggcttttgcaccagtttccgacccacaaaagatggacgactaatccggctcgtgcgtagag 19873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 42412808 - 42412906
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||||||||||||| ||| |||||  ||| |||||  |||||||||||||| || | |||| |||| || |||| | || |||||||||||| |||||    
T  42412808 cgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggag 42412906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 43330753 - 43330815
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    |||||||| ||| ||||||||||||||||||| |||||  ||||||||||  |||| ||||||    
T  43330753 caccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtt 43330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 50405608 - 50405686
Alignment:
Q  121 gcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    ||||||||||||  | |||||| | ||| ||||||||||| ||||||| |||||  ||||||||||  |||||||||||    
T  50405608 gcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtt 50405686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 39849144 - 39849091
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctc 203  Q
    ||||||||||||||| ||| |||||  |||| ||||| ||||||||||||||||    
T  39849144 cgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttcctc 39849091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 45877560 - 45877435
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | || ||| | || |||||||||||||||| ||| |||||  ||| |||||| ||||| |||||| | ||||  ||| ||||    
T  45877560 tttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaac 45877461  T
Q  217 tcgatatttcacgcatacgtccttgg 242  Q
     || |||| | || ||||||||||||    
T  45877460 ccggtattccccggatacgtccttgg 45877435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 26043923 - 26043835
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||| |||||| ||||||||   | |||||||| ||  ||||||||||||||| ||| |||||  |||||||||| ||||| |||||||    
T  26043923 ttggctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttc 26043835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 26590267 - 26590366
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaa 215  Q
    |||||||||||||||| ||| ||||||| | |  ||| |||||  |||||||  |||||  |||| |||||||||||||||||||| ||||||||| |||    
T  26590267 tttcgcaccggtttccgatc-caccaaatacgatcgattaatctagctcgtgtgtagaggcatgcacactgaccaagcgttgttccccctgagaatcgaa 26590365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 34374429 - 34374525
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    ||||| || |||| |||| |||||||||||  | ||||||||| || ||||||||||| ||  ||| | |||  |||||||||||||||| ||||||    
T  34374429 tttttttttttggctttcacaccggtttccgacccaccaaagaagggcgactaatccgacttatgcgttgaggcatgcgcactgaccaagtgttgtt 34374525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 45450448 - 45450532
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||| | || ||||| |||||||||||||  |||  ||| |||||  ||||||||||  ||||| |||||||    
T  45450448 tttcgcaccggtttccaactcatcaaaggtggacgactaatctagcttatgcgtagaggcatgcgcactggtcaagcattgttcc 45450532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 47471937 - 47471853
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||| ||||||||  | |||||||| |||||||||||| |||||| ||| ||||   |||||||||  |||||| |||||||    
T  47471937 tttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttcc 47471853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 55069684 - 55069764
Alignment:
Q  121 gcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||  | |||||||| ||  ||| ||||||||||||||| |||||  ||| |||||| |||| |||||||||    
T  55069684 gcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttcc 55069764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 5e-28; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 40780861 - 40780984
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||||||||||||||||||| ||| |||||  ||||||||||||||||||||||||| | ||||||| ||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaac 40780960  T
Q  217 tcgatatttcacgcatacgtcctt 240  Q
     ||||||||  || ||||||||||    
T  40780961 ccgatattttccgaatacgtcctt 40780984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 38166138 - 38166007
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||| ||||||||||||||||||| |||||  |||||||||| |||||||||||||| |||| ||||  |||    
T  38166138 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaac 38166039  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     |  |||| | || |||||||||||| |||||    
T  38166038 ccagtattccccggatacgtccttggaaggag 38166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 42722577 - 42722708
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||| |  | ||| |||| || |||||||||||||||| ||| |||||  |||||||||| ||||||||||||||||||| |||| ||||    
T  42722577 tttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaac 42722676  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||||| ||  ||||||||||| |||||    
T  42722677 ccggtatttcccgggtacgtccttggaaggag 42722708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 2559418 - 2559330
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcct 205  Q
    ||||||||||||||||  | |||||||| ||||||| |||||||||| |||| |||||  |||||||||| ||||||||||||||||||    
T  2559418 tttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcct 2559330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 4738744 - 4738640
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | |||||||| |||||||||||| | |||| ||| |||||| |||||||||| | ||||||||||||    
T  4738744 ttttttttttttggctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgttcc 4738645  T
Q  202 tcctg 206  Q
    |||||    
T  4738644 tcctg 4738640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 248
Target Start/End: Original strand, 1940779 - 1940905
Alignment:
Q  119 tcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactc 218  Q
    |||||||||||| |  | |||||||| ||| ||||||||||||||||||| |||||  ||||||||   |||||||||||||| |||| |||| |||| |    
T  1940779 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 1940875  T
Q  219 gatatttcacgcatacgtccttggtaggag 248  Q
    |||||||| ||  ||||||||||| |||||    
T  1940876 gatatttcccgggtacgtccttggaaggag 1940905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 29895898 - 29895767
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||    |||||| | ||||||||||||||||||| ||| |||||  |||||||||| ||||| |||||||| |||| |||| ||||    
T  29895898 tttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaac 29895799  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | || |||||||||||| |||||    
T  29895798 ccggtattccccggatacgtccttggaaggag 29895767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 7246646 - 7246730
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||  | |||||||| ||| ||||||||||||||| ||| |||||  |||||||||| ||||||||||||||    
T  7246646 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 7246730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 1446908 - 1446806
Alignment:
Q  146 tggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtag 245  Q
    ||||||||||||||||||| ||| |||||  |||||||||| ||||| |||||||| |||| |||| |||| || |||| | || |||||||||||| ||    
T  1446908 tggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaag 1446809  T
Q  246 gag 248  Q
    |||    
T  1446808 gag 1446806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 5472868 - 5472942
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||||||| ||| ||||||||||||||||||| |||||  |||||||||| |||||||||||| | |||||||||    
T  5472868 caccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaat 5472942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 8889128 - 8889010
Alignment:
Q  122 caccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgat 221  Q
    |||||||||||  | |||||||| ||||||||||||||||||| ||| |||||  |||||||||| ||||| |||||||| |||  |||| |||| || |    
T  8889128 caccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggt 8889029  T
Q  222 atttcacgcatacgtcctt 240  Q
    ||| | || ||||||||||    
T  8889028 attccccggatacgtcctt 8889010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 43458724 - 43458630
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    ||||||| ||||||||  | || ||||| ||||||||||||||||||||| | |||||  |||||||||| ||||||||| ||||||||| ||||    
T  43458724 tttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaat 43458630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 248
Target Start/End: Complemental strand, 53599185 - 53599040
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||| || |||| |||||||||||||||| ||| ||| |||| || |||| ||||||||||| ||| |||||  |||||||||| |||| |||||||||    
T  53599185 tttttttttttggctttcgcaccggtttccgatc-cactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcc 53599087  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||| |||| |||| || |||| | ||  ||||||||||| |||||    
T  53599086 tcctgggaatcgaacccggtattccccgggtacgtccttggaaggag 53599040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 49260660 - 49260749
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||| ||| |||||| |||||  | |||||||| ||| ||||||||||||||||||| |||||  |||||||||| ||||||||||||||    
T  49260660 ttggcttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc 49260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 7742016 - 7741912
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgt 236  Q
    |||||||||||||||||||||| || |||||| |||||  ||| |||||| |||||||||||| | ||||||| | |||| ||||||| | || ||||||    
T  7742016 caccaaagatggacgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgttacccctgagattggaacccgatattcctcgaatacgt 7741917  T
Q  237 ccttg 241  Q
     ||||    
T  7741916 acttg 7741912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 36145200 - 36145340
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||    || ||||| ||||||||||||||||||| ||  |||||  ||||||||||| ||||||||||| |    
T  36145200 ttttttttttttggctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttc 36145299  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttgg 242  Q
     |||| |||| |||| || |||| | ||  |||||||||||    
T  36145300 ccctgggaatcgaacccggtattccccgggtacgtccttgg 36145340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 6779302 - 6779223
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| ||||||||||||||||||| |||||||||  |||||||||| ||| | |||||||| |||| |||| ||||    
T  6779302 caccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaac 6779223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 16450411 - 16450312
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  |  ||||||| ||||||||||||| ||||| ||| |||||  ||| |||||| |||||||||||||| |||| |||| ||||    
T  16450411 tttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaac 16450312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 247
Target Start/End: Complemental strand, 20128425 - 20128290
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| |||||||||||||||   | |||||| | |||||||||||||  |||||||| || ||  |||||||||| |||||| ||||||| |||||||||    
T  20128425 ttggctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaat 20128326  T
Q  212 agaactcgatatttcacgcatacgtccttggtagga 247  Q
     |||| |  |||| | || |||||||||||| ||||    
T  20128325 cgaacccagtattccccggatacgtccttggaagga 20128290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 20532429 - 20532516
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||||||| ||| ||||| ||||||||| ||| |||||  |||||||||| |||||||||||||||||||  ||| ||||||| ||||    
T  20532429 caccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtatt 20532516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 38168372 - 38168282
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctc 203  Q
    |||| ||||||||||||||||| | ||| |||| || |||||||||||||||| ||| |||||  ||| |||||| ||||||||||||||||    
T  38168372 ttggctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg-gcactggccaagcgttgttcctc 38168282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 47078569 - 47078438
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| |||||||  | |||||| | ||  ||||||||||||||||||| |||||  ||| |||||| |||||||||||||| |||| |||| ||||    
T  47078569 tttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaac 47078470  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | ||  ||||||||||| |||||    
T  47078469 ccggtattccccgggtacgtccttggaaggag 47078438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 52950193 - 52950086
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||| ||||||||  | |||||||| ||||||||||||| || || ||  |||||  |||||||||| |||||||||||||| |||| |||| ||||    
T  52950193 tttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaac 52950094  T
Q  217 tcgatatt 224  Q
     |||||||    
T  52950093 ccgatatt 52950086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 14859402 - 14859312
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctga 207  Q
    ||||||||| ||||||  |||| ||||| |||| |||||||| ||||||||| |||||| ||||||||||  ||| | |||||||||||||    
T  14859402 tttcgcaccagtttccgacacatcaaaggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaaacattgttcctcctga 14859312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 18531635 - 18531541
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    |||| ||||||||||||||||  | ||| |||| ||||||| ||||| || |||||||| |||  |||||||||||||||| |||||||| ||||    
T  18531635 ttggctttcgcaccggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactgaccaagtgttgttccccctg 18531541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 21429411 - 21429281
Alignment:
Q  118 ttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaact 217  Q
    |||||||||||||||  | |||||||| |||||||||| || | ||||||| |||||  |||||||||| | || ||||||||| ||| | ||| ||||     
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacc 21429312  T
Q  218 cgatatttcacgcatacgtccttggtaggag 248  Q
    ||||||| | || ||||||| |||| |||||    
T  21429311 cgatattcctcggatacgtctttggaaggag 21429281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 38075544 - 38075414
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||| ||||||||  | |||||||| ||||| | |||| |||||| ||| |||||  |||||||||| |||||||||||| | ||||||||| ||||    
T  38075544 tttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaac 38075445  T
Q  217 tcgatatttcacgcatacgtccttggtagga 247  Q
     || ||||   || |||||||||||| ||||    
T  38075444 ccggtattctccgaatacgtccttggaagga 38075414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 47682382 - 47682475
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    ||||||||||||||||  | |||||||| ||| ||||||| ||||||||||| |||||| ||| |||||| |||| |||| |||| |||||||||    
T  47682382 tttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgttattcc-cctgagaat 47682475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 48317279 - 48317365
Alignment:
Q  121 gcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctga 207  Q
    |||| |||||||| | || ||| | ||| ||||||||||||||||||| |||||  || | ||||||||||||||||||||||||||    
T  48317279 gcactggtttccaacccatcaacggtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctga 48317365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 295534 - 295619
Alignment:
Q  118 ttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctc 203  Q
    |||||||||||||| | | |||||| | ||||||||||||| || |||||| |||||  |||||||||| |||| |||||||||||    
T  295534 ttcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttcctc 295619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 13073654 - 13073542
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||||||||||||||||||||  | |||||||| |  |||||||||| || || ||| ||||| ||||||||||| |||| | ||||||| | || ||||    
T  13073654 ttgggtttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaat 13073555  T
Q  212 agaactcgatatt 224  Q
     ||||||| ||||    
T  13073554 cgaactcggtatt 13073542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 14124127 - 14124028
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||| | |||||| | ||  ||||||||||||||||||  |||||  |||||||||| ||||  |||||||| |||| |||| ||||    
T  14124127 tttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaac 14124028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 43468458 - 43468359
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||| |||  | |||||  | ||| ||||||||||||||| ||| |||||| ||| |||||| |||||||||||||| |||| |||| ||||    
T  43468458 tttcgcaccggtctccgacccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaac 43468359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 55921145 - 55921046
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||  ||| ||||||||||| | | |||||  |||||||||||||||| |||||||| |||| |||| ||||    
T  55921145 tttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaac 55921046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 55703776 - 55703834
Alignment:
Q  141 aaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    |||||||||| ||||||||||||||||  | |||| ||||||||||||||| |||||||    
T  55703776 aaagatggacaactaatccggctcgtgggttgagacatgcgcactgaccaaacgttgtt 55703834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 3159473 - 3159558
Alignment:
Q  121 gcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    ||||||||||||  | |||||| | ||  ||||||||| ||||||||| |||||  |||||||||| |||||||||||||| ||||    
T  3159473 gcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctg 3159558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 33647837 - 33647749
Alignment:
Q  112 ttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||| |||||||||||||||| ||| ||||||||||| |||||||||| || |||||| |||||  ||| ||||||  ||||||||||||    
T  33647837 ttggttttcgcaccggtttccgatc-caccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttc 33647749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 3507361 - 3507297
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||| ||||||||||||||||||||||  |||||  | |||||||  ||||||||||||||    
T  3507361 caccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgttcc 3507297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 14078023 - 14077963
Alignment:
Q  151 gactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||||||||| ||||||| |||||| |||||||||||||||| | |||| |||||| ||||    
T  14078023 gactaatccgactcgtgcgtagagacatgcgcactgaccaagtgatgtttctcctgtgaat 14077963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 36262787 - 36262851
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||| ||| ||||||||||| ||||||| |||||  ||| |||||| ||||||||||||||    
T  36262787 caccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgttcc 36262851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 49952145 - 49952277
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatgga-cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaa 215  Q
    ||||||||||||||||| | || ||||| ||   ||||||||||||||| ||| |||||   |||||||||||||| ||||||| || |||| |||  ||    
T  49952145 tttcgcaccggtttccaacccatcaaaggtgacgcgactaatccggctcatgcgtagaggcgtgcgcactgaccaaacgttgtttcttctgaaaatcaaa 49952244  T
Q  216 ctcgatatttcacgcatacgtccttggtaggag 248  Q
    |   ||||||| || |||||||||||| |||||    
T  49952245 cctaatatttcccgaatacgtccttggaaggag 49952277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 17080121 - 17080070
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||| ||| |||||  |||||||||| ||||||||||||||    
T  17080121 cgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 17080070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 27248516 - 27248408
Alignment:
Q  138 accaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtc 237  Q
    ||||||| ||| ||||||||| ||||| ||| |||||  ||||||  || ||||||||||||||||||| || | |||| || |||| | || |||||||    
T  27248516 accaaaggtgggcgactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaacccggtattccccggatacgtc 27248419  T
Q  238 cttggtaggag 248  Q
    ||||| |||||    
T  27248418 cttggaaggag 27248408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 30317324 - 30317245
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| ||| |||||||| |||||||||| |||||  || || |||| ||||||||||||||  |||||||| ||||    
T  30317324 caccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaac 30317245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 42722408 - 42722463
Alignment:
Q  146 tggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||| ||| ||||||||| |||||||||||  |||| ||||||||    
T  42722408 tggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgttcc 42722463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 3574479 - 3574553
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    ||||||||||| ||||||| |||||  |||||||||| ||||| |||||||  |||| |||| ||||||| ||||    
T  3574479 cgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtatt 3574553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 48015108 - 48015157
Alignment:
Q  152 actaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||| |||||   ||||||||| ||||||||||||||    
T  48015108 actaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcc 48015157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 41162905 - 41163013
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtcct 239  Q
    ||||| ||| |||||||| |||||| ||||||||   |||  ||||| ||||| ||||||||  |||  ||| ||||||| |||||| || |||||||||    
T  41162905 caaaggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgtcct 41163004  T
Q  240 tggtaggag 248  Q
    ||| |||||    
T  41163005 tggaaggag 41163013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 2467103 - 2467249
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  ||||||||   ||||||||||||||||||| |||||||||| |||||||||| ||||| ||||||||    
T  2467103 ttttttttttttggctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttcc 2467202  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
     ||||  ||| |||| || |||| | || |||||||||||| |||||    
T  2467203 ccctggaaatcgaacccggtattccccggatacgtccttggaaggag 2467249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 22958859 - 22958755
Alignment:
Q  138 accaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtc 237  Q
    ||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||| |||||||  |||| ||| ||| |||||||| |||   ||||||    
T  22958859 accaaaggtggacgactaatccggctcatgcatagagacatgcacactgaccaagcattgttccctctgaaaatcgaattcgatattccacaggtacgtc 22958760  T
Q  238 cttgg 242  Q
    |||||    
T  22958759 cttgg 22958755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 43033011 - 43032902
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||||   | |||||||| ||| ||||||||||||||||||  |||||  |||||||||| |||||||||||||| |||| |||| |||     
T  43033011 tttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaat 43032912  T
Q  217 tcgatatttc 226  Q
     |||||||||    
T  43032911 ccgatatttc 43032902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 4479296 - 4479380
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||  | |||||||| |||||||||||||| |||| ||| |||||  |||||||||| ||||||||||||||    
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcc 4479380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 15884540 - 15884640
Alignment:
Q  101 gttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||||| || |||| ||||||||||||||||  | |||||||| ||| ||||||||||||||||||| |||||  |||||||||  ||||| |||||||    
T  15884540 gttttttttttttggttttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttc 15884639  T
Q  201 c 201  Q
    |    
T  15884640 c 15884640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 10927731 - 10927628
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||| ||||||||  | ||| |||| || |||||||||||||||| ||| |||||  |||||||||| ||||||||||||||    
T  10927731 ttttttttttttggctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 10927632  T
Q  202 tcct 205  Q
    ||||    
T  10927631 tcct 10927628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 36914453 - 36914556
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgt 236  Q
    |||||| | |||| |||||||||  ||| ||||||| |||||| ||||||| ||||||||||||||||||| ||| ||| |||||||||| ||  |||||    
T  36914453 caccaatggtggatgactaatccaactcatgcatagtgatatgtgcactgatcaagcgttgttcctcctgaaaatcgaattcgatatttcccgagtacgt 36914552  T
Q  237 cctt 240  Q
    ||||    
T  36914553 cctt 36914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 6100587 - 6100458
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||| |||||| |  | ||| |||| || |||||||||||||||| ||| ||| |  |||||||||| ||||||||||||||||||| ||||    
T  6100587 ttggctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaat 6100488  T
Q  212 agaactcgatatttcacgcatacgtccttg 241  Q
     |||| || |||| | || |||||||||||    
T  6100487 cgaacccggtattccccggatacgtccttg 6100458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 18374100 - 18374021
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| ||||||||||||||||||| ||| |||||  ||||||||||  ||||||||||||  ||||||||| ||||    
T  18374100 caccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaac 18374021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 43027415 - 43027316
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||| ||||||||  | || ||||||||||||||||||||||||| ||| |||||  ||||||| ||  ||| |||||||||||||| |||| ||||    
T  43027415 tttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaac 43027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 13357941 - 13358047
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||| ||||||||||||  | ||| ||||  ||||||||||||||||||||||||||||  |||| || || |||| |||||||||    
T  13357941 ttttttttttttggtttttgcaccggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcacattggccaaacgttgttcc 13358040  T
Q  202 tcctgag 208  Q
     ||||||    
T  13358041 ccctgag 13358047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 13359093 - 13359024
Alignment:
Q  156 atccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatattt 225  Q
    ||||| ||||||| ||||| ||||||||||| ||||||||||||||| |||||||| |||| || |||||    
T  13359093 atccgactcgtgcgtagaggtatgcgcactgtccaagcgttgttccttctgagaatcgaacccggtattt 13359024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 14846698 - 14846587
Alignment:
Q  104 ttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctc 203  Q
    ||||||| |||| |||||||||| |||||  | |||||||| ||||||||| ||| | ||| ||| |||||  ||||||||||||||| | ||||||| |    
T  14846698 ttttatttttggctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgttcc-c 14846600  T
Q  204 ctgagaatagaac 216  Q
    |||||||| ||||    
T  14846599 ctgagaatcgaac 14846587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 2964191 - 2964100
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctc 203  Q
    |||| |||||||||||||||   | |||||||| ||| |||||||||||| |||||| |||||  |||| || || ||||||||||||||||    
T  2964191 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctc 2964100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 3418513 - 3418644
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||||   | ||| |||| ||||||||||||| | ||| ||| ||||   |||||||||| ||||| |||||||||||| | ||| ||||    
T  3418513 tttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaac 3418612  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     ||||||| | |  |||||||||||| |||||    
T  3418613 ccgatattccccagatacgtccttggaaggag 3418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 23895678 - 23895595
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||||||| ||||||  | || ||||| ||||||| ||||||  ||||||| ||||| ||||||||||| |||||||||||||    
T  23895678 tttcgcacccgtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgttc 23895595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 24837367 - 24837269
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||||| || |||| ||||||||| |||||| ||| |||||||| |||||||||||||| |||||||| |||||  |||  ||||| |||||||||||||    
T  24837367 ttttttttttttggctttcgcaccagtttccgatc-caccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttc 24837269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 8586978 - 8587034
Alignment:
Q  156 atccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaata 212  Q
    ||||||||| ||| ||||| ||||||||||| |||||||||||||| |||| |||||    
T  8586978 atccggctcatgcgtagaggtatgcgcactggccaagcgttgttccccctgggaata 8587034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 13085607 - 13085503
Alignment:
Q  144 gatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggt 243  Q
    ||||| ||| ||||| ||||||||| ||||| ||||| ||||| | || |||||||||  |||||||| |||| || |||| | || ||||||||||||     
T  13085607 gatgggcgattaatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttgga 13085508  T
Q  244 aggag 248  Q
    |||||    
T  13085507 aggag 13085503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 45521278 - 45521194
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||  | || ||||| ||  ||||||||||||||| ||| |||||  ||||||||||| |||| ||||||||    
T  45521278 tttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcc 45521194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 17981551 - 17981420
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||| | |||||| || ||||||| |||||  |||| |||||  |||| |||||||| |||| |||| ||||    
T  17981551 tttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaac 17981452  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||||| ||  ||| ||||||| |||||    
T  17981451 ccggtatttcccgggtacatccttggaaggag 17981420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 26571052 - 26570925
Alignment:
Q  99 tcgttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgt 198  Q
    ||||| ||| || |||| |||| || ||||||||  | || ||||| ||||||||||||||||||| ||| ||||   || | ||||| |||||||||||    
T  26571052 tcgttatttttttttggctttcacatcggtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgt 26570953  T
Q  199 tcctcctgagaatagaactcgatatttc 226  Q
    ||| |||  |||| |||| |||||||||    
T  26570952 tccccctaggaattgaacccgatatttc 26570925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 8803178 - 8803096
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact 185  Q
    ||||| || |||| ||||||| ||||||||  | |||||  ||||| ||||||||||||||||||| ||||| | ||||||||    
T  8803178 tttttttttttggctttcgcatcggtttccgacccaccattgatgggcgactaatccggctcgtgcgtagaggtctgcgcact 8803096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 583927 - 583838
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||| ||||||||||||||| |   || ||||| ||| ||||||||||| ||| ||| |||||  ||||||||||  |||||||||||||    
T  583927 ttggctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttcc 583838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 8141192 - 8141087
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgt 236  Q
    |||||||  |||||||||||| | |||| ||| |||||  |||||||||| |||||||||||| | ||||  ||| |||| || |||| | || ||||||    
T  8141192 caccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgt 8141093  T
Q  237 ccttgg 242  Q
    ||||||    
T  8141092 ccttgg 8141087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 14666071 - 14666196
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||| |  | ||||||   ||| ||||||||| |||| |||| |||||  |||||||||| ||||| |||||| | |||| |||| ||||    
T  14666071 tttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaac 14666170  T
Q  217 tcgatatttcacgcatacgtccttgg 242  Q
     || |||| | || ||||||||||||    
T  14666171 ccggtattccccggatacgtccttgg 14666196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 249
Target Start/End: Complemental strand, 16894050 - 16893915
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | |||||||| ||| |||| |||||||||| ||| || ||  ||| | |||| ||||||||| |||| |||| ||||    
T  16894050 ttggctttcgcaccggtttccgac-caccaaaggtgggcgac-aatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaat 16893953  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggagt 249  Q
     |||| ||||||| | || ||||||| |||| ||||||    
T  16893952 cgaacccgatattccccggatacgtcattggaaggagt 16893915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 68102 - 68202
Alignment:
Q  121 gcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcga 220  Q
    ||||||||||||  | || ||||| || |||| ||||||||||||||  || ||  ||||  |||| |||| ||||||||||||||||||| |||| |||    
T  68102 gcaccggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaacccga 68201  T
Q  221 t 221  Q
    |    
T  68202 t 68202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 8997544 - 8997628
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||  | ||||||||||| |||||||||| ||||| ||| || ||  ||||| |||| | || |||||||||    
T  8997544 tttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttcc 8997628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 21174215 - 21174167
Alignment:
Q  152 actaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||||||||||  ||| |||||  ||||||||||||||||||||||||    
T  21174215 actaatccggctgatgcgtagagccatgcgcactgaccaagcgttgttc 21174167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 248
Target Start/End: Complemental strand, 21898773 - 21898627
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | ||| |||| || |||||||||||||||| ||| |||||  |||||||||| ||||||||||||||    
T  21898773 ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 21898674  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||| |||| |||| || |||| | || |||||||||||| |||||    
T  21898673 tcctgggaatcgaacccggtattccccggatacgtccttggaaggag 21898627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 103 - 206
Target Start/End: Complemental strand, 12606554 - 12606451
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcct 202  Q
    ||||| || |||| ||||||||||||||||| | |||||||| ||| ||||||||||||||||||| |||||  |||||||||| |||| |||||||||     
T  12606554 tttttttttttggctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccc 12606455  T
Q  203 cctg 206  Q
    ||||    
T  12606454 cctg 12606451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 3601194 - 3601100
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    ||||||||||||||||  | |||||||| ||||||||||||||||||||||  || ||  |||||||||| |||||||||||||| |||||||||    
T  3601194 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaat 3601100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 6606082 - 6606228
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | |||||| | ||||||||||||||||||| ||| |||||  |||  ||||| ||||| ||||||||    
T  6606082 ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttcc 6606181  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
     ||||||||| |||| || |||| | || |||||||||||| |||||    
T  6606182 ccctgagaatcgaacccggtattccccggatacgtccttggaaggag 6606228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 9633620 - 9633708
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||| ||||||||||||||||  | |||||||| ||| ||||||||||||||||||| |||||  |||||||||| |||||||||||||    
T  9633620 ttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 13036004 - 13036135
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | ||||||   ||||||||||||| ||||| ||| |||||  |||||||||| ||||| |||||||| ||||| ||| ||||    
T  13036004 tttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaac 13036103  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     ||||||| | || |||||||||||| |||||    
T  13036104 ccgatattccccgaatacgtccttggaaggag 13036135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 30788839 - 30788937
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||| || |||| ||||||||||||||||  | |||||||| ||| ||||||||||||||||||| |||||  |||||||||| |||| |||||||||    
T  30788839 tttttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgttcc 30788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 2271326 - 2271432
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtcct 239  Q
    ||||| ||||||||||||||||||||||| |||||| |||||||||| | |||||||||||   |||||||| |||| || |||| | || |||||||||    
T  2271326 caaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgttc--tctgagaatcgaacccggtattccccgaatacgtcct 2271423  T
Q  240 tggtaggag 248  Q
    ||| |||||    
T  2271424 tggaaggag 2271432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 13469048 - 13468912
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||| | |||||| | ||| ||||||||| ||||||||| |||||  ||| ||||||||||| ||||||||| |||  ||||    
T  13469048 ttggctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaat 13468949  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     ||||  | |||| | || |||||||||||| |||||    
T  13468948 tgaacctggtattccccggatacgtccttggaaggag 13468912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 19089622 - 19089514
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcct 202  Q
    ||||| || |||| ||||||||||||||||  | |||||||| | ||||||||||||||||||||| |||||  |||| ||||| ||||| ||||||||     
T  19089622 tttttttttttggctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccc 19089523  T
Q  203 cctgagaat 211  Q
    |||| ||||    
T  19089522 cctgggaat 19089514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 5253223 - 5253354
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||| ||| ||||||||||| ||| |||||  |||||||||| ||||| |||||||| |||| |||| ||||    
T  5253223 tttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaac 5253322  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | ||  ||||||||||| |||||    
T  5253323 ccggtattccccgggtacgtccttggaaggag 5253354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 29444760 - 29444849
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||| ||||||||  ||||||  | |||||||||||||| ||||||||||||| ||| |||||  |||||||||| ||||||||||||||    
T  29444760 ttggctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 29444849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 5029942 - 5029818
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||| ||||||  | || ||||||||| ||||||||||  ||| ||| |||||  ||||||||||||||| ||||||||     
T  5029942 ttttttttttttggctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttct 5029843  T
Q  202 tcctgagaatagaactcgatatttc 226  Q
     ||||||||| |||| |||| ||||    
T  5029842 ccctgagaatcgaacccgatgtttc 5029818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 14107353 - 14107489
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | ||| ||  |||| ||||||||||||||| ||| |||||  ||| ||||||  |||||||||||||||||| ||||    
T  14107353 ttggctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaat 14107452  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| || |||| | || ||||||| |||| |||||    
T  14107453 cgaacccggtattccccgaatacgtctttggaaggag 14107489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 19230579 - 19230643
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| |||| |||||||||||||||||||| |||||  ||||  |||||||||||||||||||    
T  19230579 caccaatgatgaacgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgttcc 19230643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 219
Target Start/End: Complemental strand, 30410569 - 30410453
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcct 202  Q
    |||||||| || | ||||||| ||||||||  | |||||||||||  ||| |||||| |||| ||| |||||  ||||||||||   ||| |||||||||    
T  30410569 tttttattttttgctttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactggttaagtgttgttcct 30410470  T
Q  203 cctgagaatagaactcg 219  Q
    ||||||||| |||||||    
T  30410469 cctgagaatcgaactcg 30410453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 34954642 - 34954718
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||| ||||||||||||| ||||| ||| ||||| |||| |||||| |||| ||||||||| ||||||||| ||||    
T  34954642 caaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaac 34954718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 247
Target Start/End: Complemental strand, 8932776 - 8932641
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | || ||||| |||  || ||||||||||| ||| |||||  |||||||||  ||||| |||||||| |||| ||||    
T  8932776 ttggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaat 8932677  T
Q  212 agaactcgatatttcacgcatacgtccttggtagga 247  Q
     |||| ||||||| | || |||| ||||||| ||||    
T  8932676 cgaacccgatattccccggatacatccttggaagga 8932641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 247
Target Start/End: Complemental strand, 8944242 - 8944107
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | || ||||| |||  || ||||||||||| ||| |||||  |||||||||  ||||| |||||||| |||| ||||    
T  8944242 ttggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaat 8944143  T
Q  212 agaactcgatatttcacgcatacgtccttggtagga 247  Q
     |||| ||||||| | || |||| ||||||| ||||    
T  8944142 cgaacccgatattccccggatacatccttggaagga 8944107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 10396549 - 10396499
Alignment:
Q  151 gactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||| ||| ||||||||||||||||||||| |||| |||||||||    
T  10396549 gactaatccgactcatgcatagagatatgcgcactggccaaacgttgttcc 10396499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 8149782 - 8149843
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggct 163  Q
    |||||| || |||| ||||||||||||||||| | |||||||| |||||||||||| |||||    
T  8149782 ttttttttttttggttttcgcaccggtttccaacccaccaaaggtggacgactaattcggct 8149843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 8611969 - 8612105
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| |||||||||||||||   | |||||||| ||| |||||||||||| || ||| ||||   |||| |||||  |||||||||||||||||  ||||    
T  8611969 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaat 8612068  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| || |||| | ||  ||||||||||| |||||    
T  8612069 cgaacccggtattccccgggtacgtccttggaaggag 8612105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 12635929 - 12635793
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | ||||||   ||| |||||||||||||| |||| |||||  |||||||||  |||||||||||| | |||| ||||    
T  12635929 ttggctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaat 12635830  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
      |||  | |||| | || |||||||||||| |||||    
T  12635829 caaacctggtattccccggatacgtccttggaaggag 12635793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 32157187 - 32157251
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||| |||||||| ||||| ||| ||||| |||||||||||  |||| ||||||||    
T  32157187 caccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaagtgttgttcc 32157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 8888969 - 8888910
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    ||||| ||||||||||||||| ||| ||| ||||| ||||||||||| |||| |||||||    
T  8888969 caaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtt 8888910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 8938821 - 8938722
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | || ||||| |||||||||||| |||||| ||| ||||    |||||||||  |||| ||||||||||||| |||| ||||    
T  8938821 tttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaac 8938722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 33940098 - 33940027
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    ||||||||||||||||||||||||||||  |||||  ||||||| ||   |||  |||||||||||||||||    
T  33940098 caaagatggacgactaatccggctcgtgtgtagaggcatgcgcaatggttaagtattgttcctcctgagaat 33940027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 10311514 - 10311600
Alignment:
Q  162 ctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||||| |||||| |||||||||| |||||||||||||| | |||| || |||| || |||| | || |||||| ||||| |||||    
T  10311514 ctcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttcttggaaggag 10311600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 14783415 - 14783477
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag 174  Q
    |||| ||||||||||||||||  | |||||| | ||||||||||||||||||| ||| |||||    
T  14783415 ttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagag 14783477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 31129287 - 31129193
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    ||||||||||||||||  | |||||||| || || ||||||| ||||| ||| |||||  |||||||||  |||||||||| ||| |||| ||||    
T  31129287 tttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcactagccaagcgttgctccccctgtgaat 31129193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 3587976 - 3588029
Alignment:
Q  148 gacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||||||| || ||| ||||| |||| |||||| ||||||||||||||    
T  3587976 gacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttcc 3588029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 9366459 - 9366507
Alignment:
Q  153 ctaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||||||||| |||||  |||||||||| ||||||||| ||||    
T  9366459 ctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattcc 9366507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 11142728 - 11142604
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| |||||||||||| |||  | |||||||| ||||| ||||||| | ||| ||| |||||  ||||||||||  ||| ||||||| |    
T  11142728 ttttttttttttggttttcgcaccggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttc 11142629  T
Q  202 tcctgagaatagaactcgatatttc 226  Q
      ||| |||| ||||||| ||||||    
T  11142628 cactgcgaatcgaactcggtatttc 11142604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 13391368 - 13391312
Alignment:
Q  145 atggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||| ||||||||||||||||||| |||||  |||||||||| |||| | |||||||    
T  13391368 atgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttcc 13391312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 42770671 - 42770782
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgt 236  Q
    |||||||| ||||||| |||||||||||||||  ||||  |||||||||| |||||||||||||| ||||||||| |||| || |||||| || ||||||    
T  42770671 caccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgt 42770770  T
Q  237 ccttggtaggag 248  Q
    |||||| |||||    
T  42770771 ccttggaaggag 42770782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 248
Target Start/End: Complemental strand, 10823181 - 10823035
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | ||| |||| ||| ||||||||||||||||||| |||||  |||||||||| ||||||||||||||    
T  10823181 ttttttttttttggctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc 10823082  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||| ||||  ||| || |||| | ||  ||||||||||| |||||    
T  10823081 tcctgggaatcaaacccggtattccccgggtacgtccttggaaggag 10823035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 2550974 - 2550850
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||| || | |||||||  ||| ||||||||||||||| ||| |||||| |||||||||| | ||| ||||||||||||| |||| ||||    
T  2550974 tttcgcaccggttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaac 2550875  T
Q  217 tcgatatttcacgcatacgtccttg 241  Q
     ||||||| | || |||||||||||    
T  2550874 ccgatattccccggatacgtccttg 2550850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 25540404 - 25540488
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||  | |||||||| ||||||||||||||||||||||| |||||  |||||||||| ||||||||||||||    
T  25540404 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc 25540488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 248
Target Start/End: Complemental strand, 41220756 - 41220610
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | ||| |||| || ||||||||| |||||| ||| |||||  |||||||||| ||||||||||||||    
T  41220756 ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 41220657  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||| |||| |||| || |||| | ||  ||||||||||| |||||    
T  41220656 tcctgggaatcgaacccggtattccccgggtacgtccttggaaggag 41220610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 14169609 - 14169734
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||| | | ||||||||||||||||| ||| |||||| ||||||||||  |||| |||||||| || |||||| ||||    
T  14169609 tttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaac 14169708  T
Q  217 tcgatatttcacgcatacgtccttgg 242  Q
     ||||||| | || ||||||||||||    
T  14169709 ccgatattccccgaatacgtccttgg 14169734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 38962849 - 38962745
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgt 236  Q
    |||||||| |||||||||||||||| || ||| |||||  |||||||||| |||||||||||||||||||| ||| |||| || |||| | || ||||||    
T  38962849 caccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgt 38962750  T
Q  237 ccttg 241  Q
    |||||    
T  38962749 ccttg 38962745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 248
Target Start/End: Complemental strand, 7747395 - 7747249
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | ||| |||| || |||||||||||||||| ||| |||||  |||| ||||| |||| |||||||||    
T  7747395 ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcc 7747296  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||  |||| |||| || |||| | || |||||||||||| |||||    
T  7747295 tcctaggaatcgaacccggtattccccggatacgtccttggaaggag 7747249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 8410242 - 8410130
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | | |||||  ||| ||||||||||||||||||| |||||  |||||||||| ||||| |||||||| |||| ||||    
T  8410242 ttggctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaat 8410143  T
Q  212 agaactcgatatt 224  Q
     |||| |||||||    
T  8410142 cgaacccgatatt 8410130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 249
Target Start/End: Original strand, 28616379 - 28616511
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||||   | ||| |||||||| ||||||||| ||||||||| |||||  |||||||||| ||||| ||| |||| ||||| ||| ||||    
T  28616379 tttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaac 28616478  T
Q  217 tcgatatttcacgcatacgtccttggtaggagt 249  Q
     ||||||| | || ||| |||||||| ||||||    
T  28616479 ccgatattccgcggatatgtccttggaaggagt 28616511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 34722763 - 34722687
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||| ||| ||||||||||||||||||| |||||| ||| ||||||||||||||||||||  ||||||||| ||||    
T  34722763 caaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaac 34722687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 44945712 - 44945613
Alignment:
Q  104 ttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcct 202  Q
    |||| ||||||| |||||||||||||||| ||| ||| |||| ||| ||||||||||||||||||| |||||  |||||||||  |||||||||||||||    
T  44945712 tttttttcttggctttcgcaccggtttccgatc-cactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttcct 44945614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 10026636 - 10026747
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgt 236  Q
    |||||||| ||| ||||||||||||||| ||| |||||  |||||||||| |||| ||||||||| ||||||||| |||| || |||||  ||  |||||    
T  10026636 caccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtattttccgagtacgt 10026735  T
Q  237 ccttggtaggag 248  Q
    |||||| |||||    
T  10026736 ccttggaaggag 10026747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 18902530 - 18902661
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||| ||||||||| ||||||||| |||||| | ||||||||  ||||||||||||| | || |||| ||||    
T  18902530 tttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaac 18902629  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | ||  ||||||||||| |||||    
T  18902630 ccggtattccccgagtacgtccttggaaggag 18902661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 27726046 - 27725939
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||| |||||||||||  | |||||  | ||| |||||||||||||| |||| |||||  |||||||||| |||||| |||||||||||||||||  |||    
T  27726046 tttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttcctcctgagaatcaaac 27725947  T
Q  217 tcgatatt 224  Q
    ||||||||    
T  27725946 tcgatatt 27725939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 3643887 - 3643973
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctc 203  Q
    ||||||| ||||||||  | |||||||| |||||||||||||| |||| ||| |||||  |||||||||| ||||||||||||||||    
T  3643887 tttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctc 3643973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 10669713 - 10669615
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||||| || |||| ||| ||||||||||||  | |||||||| || |||| ||||||| ||||||| |||||| |||||||||| |||||||||||||    
T  10669713 ttttttttttttggatttagcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttc 10669615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 20612529 - 20612635
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaat-ccggctcgtgcatagagatatgcgcactgaccaagcgttgtt-cctcctgaga 209  Q
    |||| ||||||||||||||||  | |||||| | |||||||||||| ||||||| |||||||||  |||||||||| ||||| |||||| ||||||||||    
T  20612529 ttggttttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgaga 20612628  T
Q  210 atagaac 216  Q
    || ||||    
T  20612629 atcgaac 20612635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 24179689 - 24179576
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||| ||||||||||  | | |||||||||||||||||||||||||||| ||| |||||  ||| |||||| |||| |||||||||    
T  24179689 ttttttttttttggcttttgcaccggtttttaacccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttcc 24179590  T
Q  202 tcctgagaatagaac 216  Q
     ||||||||| ||||    
T  24179589 -cctgagaatcgaac 24179576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 16813165 - 16813249
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||| | |||||| |  |||||||||||||||||||||||||||||||||||||  ||||| ||||  ||| |||||||||    
T  16813165 tttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcc 16813249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 16852444 - 16852528
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||| | |||||| |  |||||||||||||||||||||||||||||||||||||  ||||| ||||  ||| |||||||||    
T  16852444 tttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcc 16852528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 22593244 - 22593110
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||| | | | |||||||| ||||||||||||||||||| ||| |||||  |||||||||| |||| ||||||||| |||| ||||    
T  22593244 ttggctttcgcaccggttccgacc-caccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaat 22593147  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     ||||||  |||| | ||  ||||||||||| |||||    
T  22593146 cgaactcagtattccccgggtacgtccttggaaggag 22593110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 37560256 - 37560180
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||| ||||||| ||||||||||||||| |||||  ||||||||||||||| ||||||||| | ||||||| ||||    
T  37560256 caaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaac 37560180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 249
Target Start/End: Original strand, 3811676 - 3811823
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||| |||||||   | |||||||| ||| ||| ||||||||||| ||| |||||  ||||||| |||||||| ||||||||    
T  3811676 ttttttttttttggctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttcc 3811775  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggagt 249  Q
      ||| |||| |||| ||||||| | ||  ||||||||||| ||||||    
T  3811776 ctctgggaatcgaacccgatattcctcgagtacgtccttggaaggagt 3811823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 21286546 - 21286419
Alignment:
Q  121 gcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcga 220  Q
    ||||||||||||| | |||||| ||||   ||||||||| |||||||| |||||  ||||||||||  ||||||||||| | |||| |||| |||| ||     
T  21286546 gcaccggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccgg 21286447  T
Q  221 tatttcacgcatacgtccttggtaggag 248  Q
    |||| | || |||||||||||| |||||    
T  21286446 tattccccggatacgtccttggaaggag 21286419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 35946844 - 35946722
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||| ||||||  | |||||| | ||||||||||||||||||||||| |||||  |||| || || |||||||||||||| |||  |||| ||||    
T  35946844 tttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttcc-cctaggaatcgaac 35946746  T
Q  217 tcgatatttcacgcatacgtcctt 240  Q
    ||| |||| | || ||||||||||    
T  35946745 tcggtattccccggatacgtcctt 35946722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 44139590 - 44139491
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||  | ||| ||||||||||||||||||| |||||  | |||||||| |||||||||||||| |||| |||| ||||    
T  44139590 tttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaac 44139491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 13026445 - 13026543
Alignment:
Q  151 gactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggagt 249  Q
    |||||||||||||| ||| |||||  |||||||||| |||| | ||||||||||||| ||| |||| ||||||| |  | |||||||||||| ||||||    
T  13026445 gactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattccctggatacgtccttggaaggagt 13026543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 39201513 - 39201639
Alignment:
Q  122 caccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgat 221  Q
    |||||||||||  | |||||||| || |||||||||||||||| ||| |||||  |||| ||||| |||| | ||||||| ||||||||| ||| ||| |    
T  39201513 caccggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggt 39201612  T
Q  222 atttcacgcatacgtccttggtaggag 248  Q
    ||| | ||  ||||||||||| |||||    
T  39201613 attcctcgagtacgtccttggaaggag 39201639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 12455431 - 12455334
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    |||||| || |||| ||||||||||||||||  | |||||| | ||  ||||||||||||||||||| |||||  |||||||||| | ||||||||||    
T  12455431 ttttttttttttggctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtt 12455334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 12864330 - 12864241
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    ||||||||||||||||  | |||||| | ||||||||||||| ||||| |||  ||||  |||||||||||||||| |||||||| ||||    
T  12864330 tttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctg 12864241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 20116607 - 20116700
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcct 205  Q
    |||| ||||||||||||||||  | || ||||| |||||| |||||||||||| ||| |||||  ||||||| || ||| ||||||||||||||    
T  20116607 ttggctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgttcctcct 20116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 331598 - 331482
Alignment:
Q  126 ggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatattt 225  Q
    |||||||| | |||||||| ||| ||||||||||||||| ||| ||||   |||||||||| ||||| |||||||| |||| |||| |||| || ||||     
T  331598 ggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattc 331499  T
Q  226 cacgcatacgtccttgg 242  Q
    | ||  |||||||||||    
T  331498 cccgggtacgtccttgg 331482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 11069984 - 11069900
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||| ||||||||  | |||||| | |||||||||||| | |||||||| ||||| ||||||||||| |||| |||||||||    
T  11069984 tttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttcc 11069900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 38005523 - 38005424
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||||| || |||| ||||||||| |||||| ||| |||||||| ||| ||||||||||||||| ||  |||||  |||||||||| |||||||||||||    
T  38005523 ttttttttttttggctttcgcaccagtttccgatc-caccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttc 38005425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 45263687 - 45263751
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||||  ||| ||||||||||||||| |||||  |||||||||| ||||||||||||||    
T  45263687 caccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc 45263751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 16325701 - 16325602
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||| | ||||||||||||| ||||| ||| |||||  |||| ||||| ||||| |||||||| |||| |||| ||||    
T  16325701 tttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 41031906 - 41032005
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| |||||||  | |||||||| |||  |||||||||||||||||| |||||  |||| ||||| ||||| |||||||| |||| |||| ||||    
T  41031906 tttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaac 41032005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 216
Target Start/End: Original strand, 2528326 - 2528440
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||| ||||||  | ||| |||||||  ||||||||||||||  ||  |||||  |||| ||||||||||||||||||||    
T  2528326 ttttttttttttggctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgttcc 2528425  T
Q  202 tcctgagaatagaac 216  Q
     |||| |||| ||||    
T  2528426 ccctgggaatcgaac 2528440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 9360748 - 9360830
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    ||||||||||||||||  | ||| |||| ||| |||||||| |||||||||| |||||  |||||||||| |||| |||||||    
T  9360748 tttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 9360830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 29653733 - 29653651
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    |||| ||||||||||||||||    |||||||| ||| |||||||| |||||||||| |||||  |||||||||| ||||||||||||    
T  29653733 ttggctttcgcaccggtttcc----caccaaaggtgg-cgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgtt 29653651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 6358171 - 6358240
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    |||||| | ||||||||||||||||||| ||| |||||  |||||||||| ||||| |||||||| ||||    
T  6358171 caccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctg 6358240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 7787142 - 7787073
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    |||||||||||| ||||||||||||||||||| |||||  ||||| |||| |||||  ||||||| ||||    
T  7787142 caccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctg 7787073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 34356280 - 34356223
Alignment:
Q  149 acgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    |||| ||||||||||| |||||||||  |||||||||||||||| |||||||| ||||    
T  34356280 acgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctg 34356223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 2785038 - 2784915
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | || ||| ||||||||||||||| | ||| ||| |||||  |||||||||||||||   ||||| | ||||| ||| ||||    
T  2785038 tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactgaccaaatcttgtttc-cctgaaaatcgaac 2784940  T
Q  217 tcgatatttcacgcatacgtccttg 241  Q
    ||| |||| | || |||||||||||    
T  2784939 tcggtattcctcggatacgtccttg 2784915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 249
Target Start/End: Complemental strand, 16035043 - 16034911
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | || ||| | ||  ||||||||||||||||| | || ||  |||| |||||  ||||||||||||| ||||| ||| ||||    
T  16035043 tttcgcaccggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaac 16034944  T
Q  217 tcgatatttcacgcatacgtccttggtaggagt 249  Q
     || |||| | || |||||||||||| ||||||    
T  16034943 ccggtattcctcggatacgtccttggaaggagt 16034911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 44023401 - 44023361
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaat 157  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  44023401 tttcgcaccggtttccaacccaccaaagatggacgactaat 44023361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 18649026 - 18649120
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    ||||||| ||||||||| | |||||||  ||  ||||||||||| ||| ||| |||||  |||||||||| ||||   |||||||||||||||||    
T  18649026 tttcgcaacggtttccaacccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaat 18649120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 19976830 - 19976932
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtcct 239  Q
    ||||| ||| |||||||| || ||  ||| |||||| ||||||||||||||| |||| |||| ||||| ||| |||| || |||| | || |||||||||    
T  19976830 caaaggtgggcgactaattcgacttatgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgtcct 19976929  T
Q  240 tgg 242  Q
    |||    
T  19976930 tgg 19976932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 174
Target Start/End: Complemental strand, 25549811 - 25549777
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagag 174  Q
    ||||||||||||||||||||||||||||| |||||    
T  25549811 caaagatggacgactaatccggctcgtgcgtagag 25549777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 28525479 - 28525537
Alignment:
Q  141 aaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    |||| |||| |||||||||||||||||| |||||  |||||||||| ||||| ||||||    
T  28525479 aaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtt 28525537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 41187922 - 41187824
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||||||||| ||| ||| |||||  ||||||||||  |||||||||||  |||| ||||| ||| ||| |||| | || |||||||||||| |||||    
T  41187922 cgactaatccgtctcatgcgtagaggcatgcgcactggtcaagcgttgtttttcctaagaattgaattcggtattcctcggatacgtccttggaaggag 41187824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 29422298 - 29422237
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||| ||||||||||||||||||||||| || || ||||| || || ||||| ||||||||    
T  29422298 caaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttcc 29422237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 3848937 - 3849013
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||| || |||||||||||| ||||||| |||||| |||||| ||| |||| ||||||| | ||||| ||| ||||    
T  3848937 caaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaac 3849013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 10106670 - 10106574
Alignment:
Q  141 aaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtc 237  Q
    |||| ||||||||||||||| ||  ||||||||   |||||| || | |||||||||||||| |||||||| |||  || |||||| || |||||||    
T  10106670 aaaggtggacgactaatccgacttatgcatagaagcatgcgcgctaatcaagcgttgttccttctgagaatcgaatccggtatttctcggatacgtc 10106574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 43303319 - 43303399
Alignment:
Q  144 gatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    ||||| ||| |||||| ||||||||||||||  ||||| ||||  ||||||||||||| | ||| ||| |||| |||||||    
T  43303319 gatgggcgattaatccagctcgtgcatagaggcatgcgtactggtcaagcgttgttccccttgaaaatcgaacccgatatt 43303399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 38578867 - 38578992
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||| ||||||||||||||| ||| |||||  |||||||||| |||||||||||||| |||| |||| ||||    
T  38578867 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaac 38578966  T
Q  217 tcgatatttcacgcatacgtccttgg 242  Q
     ||||||| | ||  |||||||||||    
T  38578967 ccgatattccccgggtacgtccttgg 38578992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 1797546 - 1797438
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtcct 239  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||| |||||||||||| | |||| |||| |||| || |||| | || |||||||||    
T  1797546 caaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtcct 1797447  T
Q  240 tggtaggag 248  Q
    ||| |||||    
T  1797446 tggaaggag 1797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 17748377 - 17748507
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||| ||||||||  | || ||||| ||||||||||||||||||||| | |||||  |||||||||| |||||||||||||| |||| ||||    
T  17748377 ttggctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaat 17748476  T
Q  212 agaactcgatatttcacgcatacgtccttgg 242  Q
     |||| || |||| | || ||||||||||||    
T  17748477 cgaacccggtattccccgaatacgtccttgg 17748507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 48804792 - 48804661
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||| | ||||||||||||||||||| ||| |||||  |||||||||| ||||| |||||||| | || |||| ||||    
T  48804792 tttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaac 48804693  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | || |||||||||||| |||||    
T  48804692 ccggtattccccggatacgtccttggaaggag 48804661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 22993352 - 22993498
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| |||||||||||||||   | |||||||| ||  |||||||||||| |||||| |||||  |||| ||||| ||||||||||||||    
T  22993352 ttttttttttttggctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcc 22993451  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||  |||| |||| ||||||| | ||  ||||||||||| |||||    
T  22993452 tcctcggaatcgaacccgatattccccgggtacgtccttggaaggag 22993498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 39475025 - 39474965
Alignment:
Q  141 aaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  39475025 aaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttcc 39474965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 41945582 - 41945498
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||| |||||  | |||||||| ||||||||||||||||||||||| |||||  |||||||||| ||||||||| ||||    
T  41945582 tttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattcc 41945498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 4195202 - 4195333
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||| ||||||||| | |||||| | |||||| |||||||||||| ||| |||||  |||||||||  ||||  |||||||||||||  ||| ||||    
T  4195202 tttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaac 4195301  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
    ||| |||| | || |||||||||||| |||||    
T  4195302 tcggtattccccggatacgtccttggcaggag 4195333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 13095982 - 13095843
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||| ||||||||||||  | |||||||| ||  ||||||||||||||| ||| |||||  |||||||||| ||||| ||||||||    
T  13095982 ttttttttttttggcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcc 13095883  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttg 241  Q
     |||| ||||||||| || |||| | ||  ||||||||||    
T  13095882 ccctgggaatagaacccggtattccccgggtacgtccttg 13095843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 23658268 - 23658181
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||||||||||||||||||||||||||||||  |||||  |||| ||||| |||||||||||||| ||||  ||| ||||| ||||||    
T  23658268 caccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaactggatatt 23658181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 34659335 - 34659236
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||| |  |||||||| | ||| ||||||||||||||||||| |||||  ||||||||||  ||||||||||||| | ||||||| ||||    
T  34659335 tttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaac 34659236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 10047861 - 10048007
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | |||||| | |||||||||||| | |||| ||| |||||   ||||||||| ||||| ||||||||    
T  10047861 ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttcc 10047960  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| |||| |||| || |||| | || |||||||||||| |||||    
T  10047961 ccctgggaatcgaacccggtattccccggatacgtccttggaaggag 10048007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 22974081 - 22973945
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| |||||| ||||||||   | |||||||| ||||||||||||| ||||| ||| ||||   |||| ||||| |||||||||||||| |||||||||    
T  22974081 ttggctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaat 22973982  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| || |||| | ||  ||||||||||| |||||    
T  22973981 cgaacccggtattccccgagtacgtccttggaaggag 22973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 5039438 - 5039525
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||||||| ||  ||||||||||||||| ||| ||||| |||| |||||||||||| ||||||||||||  |||| ||||||| ||||    
T  5039438 caccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggtatt 5039525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 241
Target Start/End: Original strand, 28396166 - 28396284
Alignment:
Q  123 accggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgata 222  Q
    ||||||||||  | |||||||| | ||||||||||||||||| ||| || ||  ||||||||   | |||||||||||| ||||||||| |||| |||||    
T  28396166 accggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgttccccctgagaattgaacccgata 28396265  T
Q  223 tttcacgcatacgtccttg 241  Q
    |||| || |||||| ||||    
T  28396266 tttcccggatacgttcttg 28396284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 28744285 - 28744187
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||| || |||| ||||||||| ||||||  | |||||||| |||||||||||||||||||||   ||||| |||||| |||| |||||| |||||||    
T  28744285 tttttttttttggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagcattgttcc 28744187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 47341985 - 47341860
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||| |||||  | |||||| | || ||||| ||||| |||||||| |||||  |||||||||| ||||| |||||||| |||| |||| ||||    
T  47341985 tttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaac 47341886  T
Q  217 tcgatatttcacgcatacgtccttgg 242  Q
    ||| |||| | ||  |||||||||||    
T  47341885 tcggtattccccgggtacgtccttgg 47341860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 240
Target Start/End: Original strand, 5069810 - 5069938
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||| ||||||||  | |||||||| ||| |||||||||||||| |||| |||||  |||| ||||  | |||||||||||||||||  |||    
T  5069810 ttggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaat 5069909  T
Q  212 agaactcgatatttcacgcatacgtcctt 240  Q
     |||| || |||||| ||  |||||||||    
T  5069910 cgaacccggtatttcccgggtacgtcctt 5069938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 8734686 - 8734770
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||  | |||||||| ||| ||||||||| ||||||||| | |||  |||||||||| |||||| |||||||    
T  8734686 tttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcc 8734770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 37514998 - 37514946
Alignment:
Q  149 acgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||| ||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  37514998 acgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcc 37514946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 39420962 - 39420862
Alignment:
Q  101 gttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||||| || |||| ||| ||||||||||||  | || ||||| | ||||||||||||||||| ||| |||||  | |||||||| |||||||||||||    
T  39420962 gttttttttttttggcttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttc 39420863  T
Q  201 c 201  Q
    |    
T  39420862 c 39420862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 1606055 - 1605961
Alignment:
Q  112 ttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    |||| |||||||||||||||| ||| |||||||| ||| |||||||||||||||  || |||||  ||| |||||| |||||||||||||| ||||    
T  1606055 ttggctttcgcaccggtttccgatc-caccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctg 1605961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 43346779 - 43346878
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| |||||||  | |||||||||||  ||||||||||||||||| | |||||  |||||||| | ||||| |||||||| | ||||||| ||||    
T  43346779 tttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaac 43346878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 16802199 - 16802101
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||||||||||||||||| |||||  || ||||||| |||| ||||||||||||| ||||| |||  || |||| | ||  ||||||||||| |||||    
T  16802199 cgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtattccccgggtacgtccttggaaggag 16802101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 21530872 - 21530763
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||| ||||||||||  | |||||||| ||  ||| |||| |||||||||| |||||  ||| |||||||||||| ||||||||    
T  21530872 ttttttttttttggctttcgaaccggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttcc 21530773  T
Q  202 tcctgagaat 211  Q
     |||| ||||    
T  21530772 ccctgggaat 21530763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 43861967 - 43862071
Alignment:
Q  112 ttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaa 210  Q
    |||| |||||||||||||| | ||| |||||||| || | |||||||||||||| ||| |||||  |||||||||| |||| ||||||||| |||| |||    
T  43861967 ttggctttcgcaccggttttcgatc-caccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaa 43862065  T
Q  211 tagaac 216  Q
    | ||||    
T  43862066 tcgaac 43862071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 3353510 - 3353427
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    ||||| ||||||||||||||||||||||| |||||  |||||||||| ||||  |||||| | ||||||||| || | |||||||    
T  3353510 caaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttc-cctgagaatcgatcccgatatt 3353427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 249
Target Start/End: Original strand, 26423288 - 26423419
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| || |||||||||| ||||||||| |||||  | | |||||| |||||||||||| | |||| |||| ||||    
T  26423288 tttcgcaccggtttccgac-caccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaac 26423386  T
Q  217 tcgatatttcacgcatacgtccttggtaggagt 249  Q
     || |||| |  |  ||||||||||| ||||||    
T  26423387 ccggtattccttgggtacgtccttggaaggagt 26423419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 43925586 - 43925490
Alignment:
Q  152 actaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    |||||||| |||| ||| |||||  |||||||||||||||| |||||||| |||| |||| |||| || |||| | ||  ||||||||||| |||||    
T  43925586 actaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggag 43925490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 21190780 - 21190911
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||| |  | |||||  ||||| ||||||||| | ||||||| |||||  |||||||||  |||||||||| |||||||  |||| ||||    
T  21190780 tttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaac 21190879  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | || ||| |||||||| |||||    
T  21190880 ccggtattccccggataagtccttggaaggag 21190911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 18785777 - 18785647
Alignment:
Q  118 ttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaact 217  Q
    |||||||||||||||  | ||||| || || ||||||||||| | || ||| |||||  |||||||||| ||||| |||||||| |||  |||| ||||     
T  18785777 ttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacc 18785678  T
Q  218 cgatatttcacgcatacgtccttggtaggag 248  Q
    || |||| | ||  ||||||||||| |||||    
T  18785677 cggtattccccgggtacgtccttggaaggag 18785647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 48551980 - 48551883
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||| || |||| |||||||||||||||| ||| || ||||| ||||||||||||||||||| | | |||||  ||||||| || |||| ||||||||    
T  48551980 tttttgtttttggctttcgcaccggtttccgatc-catcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgttgttc 48551883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 27028388 - 27028299
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    ||||||||||||||||  | |||||||| ||  |||||||||| |||| ||  |||||  |||||||||| ||||| |||||||| ||||    
T  27028388 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctg 27028299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 365214 - 365150
Alignment:
Q  152 actaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||| ||||| ||| |||||  |||||||||||  ||||||||||||||||| |||| ||||    
T  365214 actaatcaggctcatgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaac 365150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 3603466 - 3603394
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacc 189  Q
    |||||||||| |||||  | |||||||  || |||| ||||||||||||||| |||||  |||||||||||||    
T  3603466 tttcgcaccgatttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactgacc 3603394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 14650431 - 14650319
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| |||||||||||||| || | |||||||| ||  ||||||| ||||||| ||| |||||  ||  ||||||  ||||| ||||||||||||  |||    
T  14650431 ttggctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaat 14650332  T
Q  212 agaactcgatatt 224  Q
     |||| |||||||    
T  14650331 cgaacccgatatt 14650319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 24983403 - 24983487
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccat-cacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact 185  Q
    |||||| || |||| ||||||| |||||||||  | |||||| | ||||||||||||||||||| ||| |||||  |||||||||    
T  24983403 ttttttttttttggctttcgcatcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 29805440 - 29805524
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||| |||||||  | ||| |||| | ||||| ||||  ||||| ||| |||||| ||||||||||||||| |||||||||    
T  29805440 tttcgcactggtttccgactcactaaaggtagacgattaatttggctcatgcgtagagacatgcgcactgaccaaacgttgttcc 29805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 30827370 - 30827318
Alignment:
Q  148 gacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||||||||||||||||||| |||||  ||||| |||| ||||| |||||||    
T  30827370 gacgactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttc 30827318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 36619274 - 36619378
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgt 236  Q
    |||||| | ||||||||||||||||||| ||| |||||  |||| |||||  |||| |||||||| |||| |||| |||| || |||| | |  ||||||    
T  36619274 caccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacgt 36619373  T
Q  237 ccttg 241  Q
    |||||    
T  36619374 ccttg 36619378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 41158 - 41046
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||| ||||||||||  | |||||||||||| ||||||||||||||||||| |||||  |||| ||||||||||| |||||||| | |||||||    
T  41158 ttggctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaat 41059  T
Q  212 agaactcgatatt 224  Q
     |||| |||||||    
T  41058 cgaacccgatatt 41046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 42086439 - 42086303
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | |||||||| ||||||||||||||||||| ||| |||||  ||||||||||  ||||||||||||| |||| ||||    
T  42086439 ttggctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaat 42086340  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| || |||| | ||  ||||||||||| |||||    
T  42086339 cgaacccggtattcctcgggtacgtccttggaaggag 42086303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 216
Target Start/End: Complemental strand, 9805116 - 9805012
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||| ||||||  | |||||||| ||||||||||||||||||| ||| |||||  |||||||||| |||||||||||||| |||| ||||    
T  9805116 ttggctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaat 9805017  T
Q  212 agaac 216  Q
     ||||    
T  9805016 cgaac 9805012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 14588617 - 14588741
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||| |  | |||||||| ||||||||||||||||||| ||| |||||  ||||||||||  |||||||| |||||||||| ||| ||||    
T  14588617 tttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaac 14588716  T
Q  217 tcgatatttcacgcatacgtccttg 241  Q
     ||||||| | |  |||||||||||    
T  14588717 ccgatattccccagatacgtccttg 14588741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 5731905 - 5732051
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | ||| |||| || |||||||||| ||||| | | |||||  |||||||||| ||||||||||||||    
T  5731905 ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcc 5732004  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||| |||| |||| || |||| | ||  ||||||||||| |||||    
T  5732005 tcctgggaatcgaacccggtattccccgggtacgtccttggaaggag 5732051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 20682617 - 20682706
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    ||||||||||||||||| | ||| |||| ||| ||| ||||||||||||||| |||||  |||||||||| |||||||||||||| ||||    
T  20682617 tttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctg 20682706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 1538543 - 1538407
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | |||||| | ||||||| ||||||||||| ||| |||||  |||||||||| ||||| |||||||| |||| ||||    
T  1538543 ttggctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaat 1538444  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| || |||| | || ||||||||| || |||||    
T  1538443 cgaacccggtattccccgaatacgtcctcggaaggag 1538407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 19572836 - 19572700
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| |||||||| |||||||| | |||||| | || |||||||||||||||| ||| |||||  |||||||||| ||||| |||||||| |||| ||||    
T  19572836 ttggctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaat 19572737  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
      ||| || |||| | || |||||||||||| |||||    
T  19572736 ctaacccggtattccccggatacgtccttggaaggag 19572700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 37263347 - 37263241
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaa 215  Q
    |||||||||||||||| ||| ||  |||| ||||||||||||||||||||||| |||||  ||||||| || |||||||||||||| ||||||||| |||    
T  37263347 tttcgcaccggtttccgatc-caataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcc-cctgagaatcgaa 37263250  T
Q  216 ctcgatatt 224  Q
    | |||||||    
T  37263249 cccgatatt 37263241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 41801061 - 41800977
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||||||| |||||||||||||||||||| |||||| ||||||| ||  ||||||||||||| | ||||||| |||| |||||||    
T  41801061 caaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaacccgatatt 41800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 7866688 - 7866557
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| |||||| | | |||||||| ||| |||||||||||| |||||| |||||  |||| ||||| ||||||||||||||||||  |||| ||||    
T  7866688 tttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaac 7866589  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | ||  ||||||||||| |||||    
T  7866588 ccggtattcctcgggtacgtccttggaaggag 7866557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 12081995 - 12081916
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| |||||||||||| |||||||||| ||||   |||||||||| |||||||||||||| ||||||||| ||||    
T  12081995 caccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaac 12081916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 9168277 - 9168339
Alignment:
Q  141 aaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctc 203  Q
    |||| ||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||    
T  9168277 aaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcctc 9168339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 20525945 - 20525821
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaa 215  Q
    |||||||||||||||| ||| |||||| | ||||||||||||||||||| ||| |||||  |||||||||| | ||| |||||||| |||| |||| |||    
T  20525945 tttcgcaccggtttccgatc-caccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaa 20525847  T
Q  216 ctcgatatttcacgcatacgtccttg 241  Q
    | ||||||| | || |||| ||||||    
T  20525846 cccgatattccccggatacatccttg 20525821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 23247374 - 23247458
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    ||||| ||||||||||||| ||||||||| |||||  ||||  ||||| |||||||||||||||||| |||| |||| |||||||    
T  23247374 caaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaacccgatatt 23247458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 38897704 - 38897803
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||||| || |||| |||||||| ||||||| ||| |||||||| ||| | ||||||||||||||||| |||||  |||||||||| |||||||||||||    
T  38897704 ttttttttttttggctttcgcactggtttccgatc-caccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 38897802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 42291505 - 42291588
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||||||||||||||| ||| || ||||| ||||||||||||||||||||||| |||||  ||| |||||| |||||||||||||    
T  42291505 tttcgcaccggtttccgatc-catcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttc 42291588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 8513626 - 8513495
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||||||||||||| ||||||||| |||||  ||| |||||| |||||| ||||| | |||  |||| ||||    
T  8513626 tttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaac 8513527  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | ||  ||||||||||| |||||    
T  8513526 ccggtattccccgggtacgtccttggaaggag 8513495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 23383764 - 23383665
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||| ||||||  | |||||||| |||||||||||||| |||| ||| |||||  | |||||||| |||||||||||||| |||| |||| ||||    
T  23383764 tttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaac 23383665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 249
Target Start/End: Original strand, 35638062 - 35638165
Alignment:
Q  146 tggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtag 245  Q
    ||||||||||||| | ||||||| ||||| ||||| |||||||||| ||||||||||||||| ||| ||| || ||||| | |  |||||||| ||| ||    
T  35638062 tggacgactaatctgactcgtgcgtagaggtatgcacactgaccaaacgttgttcctcctgaaaatcgaattcaatattccccaaatacgtccctggaag 35638161  T
Q  246 gagt 249  Q
    ||||    
T  35638162 gagt 35638165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 18262651 - 18262717
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||||||||||| ||||| ||||||||    
T  18262651 cgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttccccctgaaaatagaac 18262717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 43399235 - 43399145
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctga 207  Q
    ||||||||||||||||  |  ||||||  |||||||||||||| |||||||| |||||  |||||||||| ||||||||| |||| |||||    
T  43399235 tttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattccccctga 43399145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 242
Target Start/End: Original strand, 4016239 - 4016380
Alignment:
Q  101 gttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||||| || |||| |||||||| |||||||  | |||||| | ||  | ||||||||||||||||  |||||  |||||||||| ||||| |||||||    
T  4016239 gttttttttttttggctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttc 4016338  T
Q  201 ctcctgagaatagaactcgatatttcacgcatacgtccttgg 242  Q
    | ||||| ||| |||| ||||||||| |   |||||||||||    
T  4016339 cccctgataatcgaacccgatatttctcaggtacgtccttgg 4016380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 25417217 - 25417314
Alignment:
Q  151 gactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    |||||||||||||||| | |||||  |||||||||| |||||||||||||| |||| |||| |||| || |||| | ||  ||||||||||| |||||    
T  25417217 gactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggag 25417314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 40117522 - 40117402
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaa 215  Q
    |||||||||||||| | ||| |||||||| || |||| ||||||||||| ||| |||||  |||||||||| |||||||||||||| ||||  ||| |||    
T  40117522 tttcgcaccggttttcgatc-caccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 40117424  T
Q  216 ctcgatatttcacgcatacgtc 237  Q
     |||||||| | || |||||||    
T  40117423 ttcgatattccccgaatacgtc 40117402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 7308397 - 7308489
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttgg 242  Q
    ||||||||||||||| ||| |||||  ||| |||||| |||||||||||||| |||| |||| |||| ||||||| | |  ||||||||||||    
T  7308397 cgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttgg 7308489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 7336726 - 7336604
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgag-aatagaa 215  Q
    ||||||||||||||  ||| |||||||| | ||||| ||||||||||||||| |||||  |||||||||||  |||||||||| ||||| || ||| |||    
T  7336726 tttcgcaccggtttttatc-caccaaaggtagacgattaatccggctcgtgcgtagaggcatgcgcactgataaagcgttgtt-ctccttagaaatcgaa 7336629  T
Q  216 ctcgatatttcacgcatacgtcctt 240  Q
    | ||||||| | || ||||||||||    
T  7336628 cccgatattcctcggatacgtcctt 7336604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 9812984 - 9812848
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| |||||||||||||||   | |||||||| ||| |||||||||||| || ||| ||||   |||| ||||| ||||||||||||||||||  ||||    
T  9812984 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaat 9812885  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| || |||| | ||  ||||||||||| |||||    
T  9812884 cgaacccggtattccccgggtacgtccttggaaggag 9812848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 12766243 - 12766107
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| |||||||||||||||   | |||||||| ||| ||||||||| || || ||| |||||  |||| ||||| |||||| ||||||||||| |||||    
T  12766243 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaat 12766144  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| || |||| | ||  ||||||||||| |||||    
T  12766143 cgaacccggtattccccgggtacgtccttggaaggag 12766107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 18294504 - 18294568
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||||| ||| |||||||| || ||  ||||| ||||||||||||||||||||||||||    
T  18294504 caccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgttcc 18294568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 24499094 - 24499010
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgtt 196  Q
    |||| |||||||||  |||||| | |||||||||||||| | ||||||||||||| | |||||  ||||||||||| ||||||||    
T  24499094 ttggctttcgcaccaatttccaacccaccaaagatggactattaatccggctcgtacgtagaggcatgcgcactgatcaagcgtt 24499010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 39099764 - 39099868
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||| ||||||||||||  | |||||||| ||| ||||||||||||||| ||| |||||  ||| |||||| ||||| ||||||||    
T  39099764 ttttttttttttggcttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttcc 39099863  T
Q  202 tcctg 206  Q
     ||||    
T  39099864 ccctg 39099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 3653934 - 3653997
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||||||| ||||||||||||||| ||||||| |||||  ||||||||||  ||||||||||||    
T  3653934 caccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgttc 3653997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 13664372 - 13664277
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctga 207  Q
    |||| ||||||||||||||||  |||||||||| ||  ||| ||||| ||||| ||| |||||  |||||||||| ||||| |||||||| |||||    
T  13664372 ttggctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctga 13664277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 20255476 - 20255385
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgag 208  Q
    ||||||||| ||||||  | |||||||| ||||||||||||||| ||| ||| |||||  ||||||||||  |||| ||||||| |||||||    
T  20255476 tttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttcgtcctgag 20255385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 24463910 - 24463969
Alignment:
Q  141 aaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    |||| ||| |||||||||||||||||||||||||  |||||||||| |||| ||||||||    
T  24463910 aaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttc 24463969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 30995208 - 30995129
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||  ||||||||||||||||||| |||||  |||||| ||| ||||| |||||||| |||| |||| ||||    
T  30995208 caccaaagatgagcgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaac 30995129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 7736925 - 7736871
Alignment:
Q  170 tagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||||||||| ||||||||||| |||||||  |||||||||| ||||||||||||    
T  7736925 tagagatatgtgcactgaccaaacgttgtttgtcctgagaatcgaactcgatatt 7736871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 30349700 - 30349602
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||| || |||| ||||||||||||||||  | |||| ||| |||||||||||| | |||| |||||||||  |||||||||| |||| | |||||||    
T  30349700 tttttttttttggctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttcc 30349602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 5079418 - 5079349
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    |||||||| ||| ||||||||||||||||||| ||||   ||||||| |||||||||| |||||| ||||    
T  5079418 caccaaaggtgggcgactaatccggctcgtgcgtagaagcatgcgcattgaccaagcgctgttccccctg 5079349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 14728190 - 14728109
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgt 198  Q
    ||||||||||||||||  | || ||||| ||  | ||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  14728190 tttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgt 14728109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 21487697 - 21487617
Alignment:
Q  141 aaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||| ||| ||||||||||||||||||   ||||  |||||||||  |||| ||||||||||||||| ||| ||||||||||||    
T  21487697 aaaggtgggcgactaatccggctcgtg---agaggcatgcgcactagccaaacgttgttcctcctgaaaatcgaactcgatatt 21487617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 35403558 - 35403643
Alignment:
Q  163 tcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    |||||| |||||| ||||||| || |||||||||||||| ||| ||||| |||| || |||||| ||  ||||||||||| |||||    
T  35403558 tcgtgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggag 35403643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 41163455 - 41163544
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||| ||||||||| ||||||  | ||| |||| |||||||||||||| |||| ||| |||||| ||| |||||| |||| |||||||||    
T  41163455 ttggctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttcc 41163544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 42861203 - 42861300
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    |||||| || |||| |||||||||||| |||  | |||||| | ||||||| ||||||||||| ||| |||||  |||||||||| ||||| ||||||    
T  42861203 ttttttttttttggctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 42861300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 12705126 - 12704990
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| |||||||||||||||   | |||||||| ||| |||||||||||| || ||| ||||   |||| |||||  |||||||||||||||||  ||||    
T  12705126 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaat 12705027  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| || |||| | ||  ||||||||||| |||||    
T  12705026 cgaacccggtattccccgggtacgtccttggaaggag 12704990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 24653832 - 24653935
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgt 236  Q
    |||||| | ||||||| ||||||||||  ||| ||||| ||||||||||||||||| |||||||  ||||| ||| |||| | ||||| | || ||||||    
T  24653832 caccaatggtggacgattaatccggcta-tgcgtagaggtatgcgcactgaccaagtgttgttctccctgaaaatcgaaccctatattccccggatacgt 24653930  T
Q  237 ccttg 241  Q
    |||||    
T  24653931 ccttg 24653935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 24875429 - 24875369
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||| ||||||| ||||||||||||||| |||||| ||||||||||  ||| ||||||||    
T  24875429 caaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttc 24875369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 11845801 - 11845932
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||| |||||||||||| | || ||||| ||| ||| |||| |||||| | | |||||  |||||||||| |||| ||||||||| |||   ||| ||||    
T  11845801 tttcacaccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaac 11845900  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     ||||||||| ||  ||||||||||| |||||    
T  11845901 ccgatatttctcgggtacgtccttggaaggag 11845932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 14974344 - 14974431
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||||||| ||||||||||||||||||| ||| |||||  ||| |||||| ||||  |||||||| | | ||||| |||| |||||||    
T  14974344 caccaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatatt 14974431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 35006769 - 35006819
Alignment:
Q  151 gactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||| ||||||||| |||||  |||| ||||||||||||||||||||    
T  35006769 gactaatctggctcgtgcgtagaggcatgcacactgaccaagcgttgttcc 35006819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 40773385 - 40773331
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgt 166  Q
    |||| ||||||||||||||||  | ||||||||||| |||||||||||| |||||    
T  40773385 ttggctttcgcaccggtttccgacgcaccaaagatgaacgactaatccgactcgt 40773331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 36783364 - 36783303
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctc 164  Q
    ||||| || |||| ||| ||||||||||||| | |||||| | |||||||||||||||||||    
T  36783364 tttttttttttggcttttgcaccggtttccaacccaccaatggtggacgactaatccggctc 36783303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 27648425 - 27648472
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctc 164  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  27648425 tttcgcatcggtttccgatc-caccaaagatggacgactaatccggctc 27648472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 8764103 - 8763967
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||||||||  | |||||| | ||||||||||||||||||||||| |||||  |||||||||| ||||| |||||||| |||| |||     
T  8764103 ttggctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaa 8764004  T
Q  212 agaactcgatatttcacgcatacgtccttggtaggag 248  Q
     |||| ||||||| | ||  ||||||||||| |||||    
T  8764003 cgaacccgatattccccgggtacgtccttggaaggag 8763967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 26325919 - 26325795
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||| | ||||||||||||||||||| ||| |||||  |||||||||||||||| ||||||||  ||| |||| ||||    
T  26325919 tttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaac 26325820  T
Q  217 tcgatatttcacgcatacgtccttg 241  Q
     ||||||| | || |||||||||||    
T  26325819 ccgatattcctcggatacgtccttg 26325795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 240
Target Start/End: Original strand, 41663842 - 41663980
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  | |||||| | |||||||||||||| |||| ||| |||||  |||||||||||||||| ||||||||    
T  41663842 ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttcc 41663941  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtcctt 240  Q
     |||| |||| |||| || |||| | || ||||||||||    
T  41663942 ccctgggaatcgaacccggtattccccggatacgtcctt 41663980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 43959817 - 43959929
Alignment:
Q  112 ttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaa 210  Q
    |||| |||||||||||||||| ||| ||| |||| ||| ||||||||||||||||||| |||||  |||||||||| |||||||||||||| |||| |||    
T  43959817 ttggctttcgcaccggtttccgatc-cactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaa 43959915  T
Q  211 tagaactcgatatt 224  Q
    | |||| |||||||    
T  43959916 ttgaacccgatatt 43959929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 17642000 - 17642104
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||| ||||||  | |||||||| ||||||||||||||||||||||| |||||  |||||||||| ||||| |||||||| |||| ||||    
T  17642000 ttggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaat 17642099  T
Q  212 agaac 216  Q
     ||||    
T  17642100 cgaac 17642104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 37339942 - 37339846
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgt 198  Q
    |||||| || |||| ||||||||||||||||| | |||||||| ||| ||||||||||||||||||| | |||  |||||||||| |||||||||||    
T  37339942 ttttttttttttggctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgt 37339846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 5855629 - 5855498
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||| ||||||||  | ||| |||| || |||||||||||| ||| ||| |||||  |||||||||| ||||||||||||||||||| |||| ||||    
T  5855629 tttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaac 5855530  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | || |||||||||||| |||||    
T  5855529 ccggtattccccgaatacgtccttggaaggag 5855498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 33498863 - 33498948
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatattt 225  Q
    ||||| ||||||||||||||||||| ||| |||||  |||||||||| |||||||||| ||||||||||||| |||| || |||||    
T  33498863 caaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtattt 33498948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 10422895 - 10422807
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcct 205  Q
    ||||||||||||||||  |  ||||||| ||||||||||||||||||| ||| |||||  |||||||||| ||||| ||||||||||||    
T  10422895 tttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcct 10422807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 17092499 - 17092599
Alignment:
Q  138 accaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtc 237  Q
    ||||||| ||||||||||||||||||||||| |||||  || | ||||| |||| ||||||| | ||||| ||| |||||||||||||| || |||||||    
T  17092499 accaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactcgatatttcccgaatacgtc 17092598  T
Q  238 c 238  Q
    |    
T  17092599 c 17092599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 18915989 - 18915849
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||| | |||||| | ||  ||||||||||||||||||| |||||  |||| ||||| ||||| ||||||||    
T  18915989 ttttttttttttggctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttcc 18915890  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtccttgg 242  Q
     |||| |||| |||| || |||| | ||  |||||||||||    
T  18915889 ccctgggaatcgaacccggtattccccgggtacgtccttgg 18915849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 33418137 - 33418197
Alignment:
Q  138 accaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgt 198  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  33418137 accaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgt 33418197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 45361883 - 45361982
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | ||| |||| || |||||||||||||||  ||| ||| |  |||||||||| |||||||||||||||||||||||| ||||    
T  45361883 tttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaac 45361982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 14254292 - 14254394
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtcct 239  Q
    ||||| ||||||||||||||||||| ||| || ||  ||||| |||| |||||||||||||| ||||| ||| ||||||| |||| | || |||||||||    
T  14254292 caaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattccccgaatacgtcct 14254391  T
Q  240 tgg 242  Q
    |||    
T  14254392 tgg 14254394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 50371835 - 50371943
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaa 215  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||||| |||| ||||   ||||| |||| ||||||||||||| |||||| ||| |||    
T  50371835 tttcgcaccggtttccgatc-caccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatcgaa 50371933  T
Q  216 ctcgatattt 225  Q
    | || |||||    
T  50371934 cacgctattt 50371943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 4581683 - 4581758
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaag 192  Q
    ||||||||||||||||  | |||||||| |||||||||| |||||||||||| |||||  |||||||||| |||||    
T  4581683 tttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaag 4581758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 240
Target Start/End: Complemental strand, 49078236 - 49078098
Alignment:
Q  102 ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||| || |||| ||||||||||||||||  |  ||||| | || |||||||||||||||| ||| |||||  |||||||||| ||||| |||||| |    
T  49078236 ttttttttttttggctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttc 49078137  T
Q  202 tcctgagaatagaactcgatatttcacgcatacgtcctt 240  Q
     |||| |||| |||| || |||| | || ||||||||||    
T  49078136 ccctgggaatcgaacccggtattccccggatacgtcctt 49078098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 216
Target Start/End: Complemental strand, 44969776 - 44969673
Alignment:
Q  112 ttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaa 210  Q
    |||| |||| ||||||||||| ||| |||||| ||||||||||||||||||||| ||| ||| |  |||| ||||| |||||||||||| ||||||||||    
T  44969776 ttggctttcacaccggtttccgatc-caccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgtt-ctcctgagaa 44969679  T
Q  211 tagaac 216  Q
    | ||||    
T  44969678 tcgaac 44969673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 32947 - 32871
Alignment:
Q  148 gacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||||||||| |||||| ||| |||||  ||| |||||||||||||||||||||||||| |||| | || |||||||    
T  32947 gacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgatatt 32871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 5063866 - 5063926
Alignment:
Q  138 accaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgt 198  Q
    ||||||| ||| |||||||||| ||||||||||||||| || ||||||| |||||||||||    
T  5063866 accaaaggtgggcgactaatccagctcgtgcatagagacatacgcactggccaagcgttgt 5063926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 9659180 - 9659248
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact 185  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||| ||| || ||  |||||||||    
T  9659180 tttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcact 9659248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 10336600 - 10336516
Alignment:
Q  140 caaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    ||||| ||||||| ||||||||||| ||| |||||  ||||||||||  ||||||||||||| ||||| ||| |||| |||||||    
T  10336600 caaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatatt 10336516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 10507776 - 10507716
Alignment:
Q  146 tggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||| |||| ||||||||||||||    
T  10507776 tggacgactaatccggctcatgcgtagaggtatgcacactggccaaacgttgttcctcctg 10507716  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 50503362 - 50503486
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||| ||||||||  | |||||  | ||| |||| |||||||||||||| |||||  ||||||||||  |||| |||||||| |||| |||| ||||    
T  50503362 tttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaac 50503461  T
Q  217 tcgatatttcacgcatacgtccttg 241  Q
     ||||||| | || |||||||||||    
T  50503462 ccgatattccccggatacgtccttg 50503486  T

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Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 10172972 - 10173055
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||||||||||||||  | |||||||| ||| ||| ||||||||||| ||| |||||  ||| |||||| |||||||||||||    
T  10172972 tttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttc 10173055  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 18649353 - 18649460
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||||||||||||   ||| |||| ||| ||| ||||| ||||||| | |||||  ||||||||||  ||||||||||||| ||||| ||| ||||    
T  18649353 tttcgcaccggtttccaatccactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaac 18649452  T
Q  217 tcgatatt 224  Q
     |||||||    
T  18649453 ccgatatt 18649460  T

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Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 45726454 - 45726533
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| || |||||||||||||||| ||| |||||| || ||||||| ||||  ||| |||||||||||||| ||||    
T  45726454 caccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaac 45726533  T

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Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 2567383 - 2567301
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    ||||| ||||||||||  | ||||||||||||||| |||||| | ||||||  |||||  |||||||||| ||||||||||||    
T  2567383 tttcgtaccggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgtt 2567301  T

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Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 16263652 - 16263563
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    |||||||||||||||| ||| || ||||  |||||||||| |||||||  ||| |||||  |||||||||| |||||||||||||||||||    
T  16263652 tttcgcaccggtttccgatc-catcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgttcctcctg 16263563  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 33004050 - 33004147
Alignment:
Q  151 gactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    |||||||||||||||||| |||||  |||||||||| |||||| ||||| | ||||  ||| |||  ||||||| | || |||||||||||| |||||    
T  33004050 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttggaaggag 33004147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 48761262 - 48761197
Alignment:
Q  138 accaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctc 203  Q
    ||||||| |||||||||||||| |||||||| |||||  |||  |||||||||| |||||||||||    
T  48761262 accaaaggtggacgactaatccagctcgtgcgtagaggcatgtccactgaccaaacgttgttcctc 48761197  T

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Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 2980932 - 2981016
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||| |||||  | ||| ||| |||||||||||||||| ||||||| |||||  |||| ||||| ||||| ||||||||    
T  2980932 tttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcc 2981016  T

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Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 31576552 - 31576656
Alignment:
Q  121 gcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcga 220  Q
    ||||||||||||  |||| ||||||||||||||||| ||||||| ||| |||||  |  |||| || |||||| ||||| | ||||||||| |||| ||     
T  31576552 gcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaacccgg 31576651  T
Q  221 tattt 225  Q
    |||||    
T  31576652 tattt 31576656  T

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Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 5504138 - 5504039
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||| ||||||||||  | || ||||| ||||||||||||||||||| ||| |||||  ||| ||||| | |||||||||||   ||||||||| ||||    
T  5504138 tttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaac 5504039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 16956573 - 16956442
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    |||||||| |||||||  | |||||||| ||   |||||||||||||||||| |||||  ||||||||||  ||| ||||||| | ||||||||  ||||    
T  16956573 tttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaac 16956474  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | ||  ||||||||||| |||||    
T  16956473 acggtattccccgggtacgtccttggaaggag 16956442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 17988688 - 17988743
Alignment:
Q  144 gatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgtt 199  Q
    |||||||||||||||||| || ||| ||||| ||||||||||| |||||| |||||    
T  17988688 gatggacgactaatccggttcatgcgtagaggtatgcgcactggccaagcattgtt 17988743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 21849239 - 21849290
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  21849239 cgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcc 21849290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 25178609 - 25178707
Alignment:
Q  149 acgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    ||||||||||||||| ||   ||||| ||||||||||| ||||||||| |||| | |  |||||||||||| |||||| |  |||||||||| |||||||    
T  25178609 acgactaatccggcttgtctgtagaggtatgcgcactggccaagcgttattcc-cttaggaatagaactcggtatttcccaaatacgtccttagtaggag 25178707  T

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Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 30927732 - 30927859
Alignment:
Q  121 gcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcga 220  Q
    |||||||||||   | |||||||  ||||||||||||||||||| ||| |||||  |||| || || ||||||||||||||  |||  ||| |||| |||    
T  30927732 gcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaacccga 30927831  T
Q  221 tatttcacgcatacgtccttggtaggag 248  Q
    |||||| |   ||||||||||| |||||    
T  30927832 tatttcccaggtacgtccttggaaggag 30927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 13262161 - 13262107
Alignment:
Q  146 tggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||||||||||||| ||||||| |||||| ||||| | ||||||| ||||||||    
T  13262161 tggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttc 13262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 6563513 - 6563464
Alignment:
Q  152 actaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||| ||||||||| |||||| ||| |||||| ||||||||||||||    
T  6563513 actaatctggctcgtgcgtagagacatgtgcactggccaagcgttgttcc 6563464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 28324615 - 28324688
Alignment:
Q  151 gactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    |||||||||||||| ||| |||||  |||||||||||||||| |||||| | || | |||| |||| |||||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatatt 28324688  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 35908836 - 35908791
Alignment:
Q  146 tggacgactaatccggctcgtgcatagagatatgcgcactgaccaa 191  Q
    ||||||||||||||||||| ||| |||||  |||||||||||||||    
T  35908836 tggacgactaatccggctcatgcgtagaggcatgcgcactgaccaa 35908791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 48798105 - 48798202
Alignment:
Q  151 gactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    |||||||||||||| ||| |||||  |||||||||   ||||||||||||| ||||  ||| |||| ||||||| | || ||||||| |||| |||||    
T  48798105 gactaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggag 48798202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 11397890 - 11397974
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||| |||||  | |||||||| ||||||||||||||| ||| ||| |||||  || |||| || |||| |||||||||    
T  11397890 tttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcc 11397974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 26660244 - 26660161
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||||||||||||  | |||||||| ||| ||||||||||||||| ||| |||||  ||||| ||||| |||  ||||||||    
T  26660244 tttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttcc 26660161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 216
Target Start/End: Complemental strand, 34697447 - 34697343
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||| ||||||||| | || ||||  ||| ||||||||||||||| ||| |||||  |||| ||||  ||||| |||||||| ||| |||||    
T  34697447 ttggctttcgcatcggtttccaacccatcaaaagtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaat 34697348  T
Q  212 agaac 216  Q
     ||||    
T  34697347 cgaac 34697343  T

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Target: scaffold0011 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 224426 - 224319
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||||||||||||||||||||||||||| ||||| |||| ||||||| ||| |||| |||  ||||||| | ||||    
T  224426 tttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaacgttattctccctgagattcgaac 224327  T
Q  217 tcgatatt 224  Q
     |||||||    
T  224326 ccgatatt 224319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 186626 - 186552
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaa 191  Q
    |||| |||||||||||  | ||| ||||||| |||||||||||||||||||| |||||  ||| |||||||||||    
T  186626 tttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaa 186552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 319545 - 319447
Alignment:
Q  103 tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||| || |||| ||||||||||||||||  | |||||||| |||||||||||||| |||| |||||||||  |||||||||| ||||||||||||||    
T  319545 tttttttttttggctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttcc 319447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 412091 - 412157
Alignment:
Q  182 cactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtccttggtaggag 248  Q
    |||||||||||||||||||| |||| |||| ||||||| |||| | || |||||||||||| |||||    
T  412091 cactgaccaagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggag 412157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 679 - 548
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||  ||||||||| ||||| | | |||||  |||| |||||| |||| |||||||| |||| |||| ||||    
T  679 tttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaac 580  T
Q  217 tcgatatttcacgcatacgtccttggtaggag 248  Q
     || |||| | ||  ||||||||||| |||||    
T  579 ccggtattccccgggtacgtccttggaaggag 548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 16988 - 16889
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||| ||||||||| | |||||||| ||  ||||||||| ||||||||| |||||| || |||||||||||||||||||| | ||||||||| ||||    
T  16988 tttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtttcccctgagaattgaac 16889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 248
Target Start/End: Complemental strand, 68621 - 68495
Alignment:
Q  119 tcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactc 218  Q
    |||||||||||| |  | |||||||| ||| ||||||||||||||||||| |||||  ||||||||   |||||||||||||| |||| |||| |||| |    
T  68621 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 68525  T
Q  219 gatatttcacgcatacgtccttggtaggag 248  Q
    |||||||| ||  ||||||||||| |||||    
T  68524 gatatttcccgggtacgtccttggaaggag 68495  T

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Target: scaffold0005 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 271107 - 271181
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatt 224  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||||||| |||| |||| |||| |||||||    
T  271107 cgactaacccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatatt 271181  T

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Target: scaffold0170 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 9934 - 9865
Alignment:
Q  137 caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    |||||||| ||||||||||||||||||||||| |||||  |||||||||| |||||||||||||| ||||    
T  9934 caccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctg 9865  T

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Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 155706 - 155805
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaat 211  Q
    |||| ||||||||||| ||||  | |||||||| ||| ||||||||||||||||||| |||||  |||||||||  |||||||||||||| |||| ||||    
T  155706 ttggctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctgggaat 155805  T

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Target: scaffold0291 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 6964 - 6865
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||||||||||  | |||||||| ||  ||||||||||||||| ||| |||||  |||||||||| ||||| |||||||| |||| |||| ||||    
T  6964 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaac 6865  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 8701 - 8800
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaac 216  Q
    ||||||||| ||||||  | |||||||| |||||||||||||| |||| ||| |||||  | |||||||| |||||||||||||| |||| |||| ||||    
T  8701 tttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaac 8800  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 42832 - 42915
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttc 200  Q
    ||||||||||||||||  | |||||||| ||| ||||||||||||||| ||  |||||  ||||||||||||||||| ||||||    
T  42832 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttc 42915  T

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Target: scaffold0376 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 12779 - 12691
Alignment:
Q  117 tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcct 205  Q
    |||||||||||||||   | || ||||| ||| |||||||||||| |||||| |||||  |||| ||||| ||||||||||||||||||    
T  12779 tttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcct 12691  T

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Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 26263 - 26203
Alignment:
Q  146 tggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctg 206  Q
    ||||||||||||||||||||||| |||||  |||| ||||| |||||||||||||| ||||    
T  26263 tggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctg 26203  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 65185 - 65236
Alignment:
Q  150 cgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||| |||| ||| |||||| |||||||||| ||||||||||||||    
T  65185 cgactaatccagctcatgcgtagagacatgcgcactggccaagcgttgttcc 65236  T

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Target: scaffold0341 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 18706 - 18657
Alignment:
Q  152 actaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    ||||||| ||||||||| |||||| ||| |||||| ||||||||||||||    
T  18706 actaatctggctcgtgcgtagagacatgtgcactggccaagcgttgttcc 18657  T

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Target: scaffold0209 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 12687 - 12598
Alignment:
Q  112 ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||| ||||||||||||||| |   || ||||| ||| ||||||||||| ||| ||| |||||  ||||||||||  |||||||||||||    
T  12687 ttggctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttcc 12598  T

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Target: scaffold0155 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 19364 - 19280
Alignment:
Q  117 tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcc 201  Q
    |||||||||||||||| ||| ||| ||  |||| ||||||||||||||| ||| ||||| | ||||||||  ||||||||||||||    
T  19364 tttcgcaccggtttccgatc-cactaataatggccgactaatccggctcatgcgtagaggtctgcgcactagccaagcgttgttcc 19280  T

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Target: scaffold0635 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 2114 - 2210
Alignment:
Q  141 aaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccaagcgttgttcctcctgagaatagaactcgatatttcacgcatacgtc 237  Q
    |||| ||||||||||||||| ||  ||||||||   |||||| || | |||||||||||||| |||||||| |||  || |||||| || |||||||    
T  2114 aaaggtggacgactaatccgacttatgcatagaagcatgcgcgctaatcaagcgttgttccttctgagaatcgaatccggtatttctcggatacgtc 2210  T

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