View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20479_low_87 (Length: 250)
Name: NF20479_low_87
Description: NF20479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20479_low_87 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 32259760 - 32259999
Alignment:
| Q |
11 |
ttatactattgataattggatttatatagctaataagaagaacaacttactactgtgacaaactaaactggtataactaacttttatatctgataatagt |
110 |
Q |
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| T |
32259760 |
ttatactattgataattggatttatatagctaataagaagaacaacttactactgtgacaaactaaactggtataactaacttttatatctgataatagt |
32259859 |
T |
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| Q |
111 |
ctttaaatttatatttaagtgaaaaatgtgtgcagggtggaattatgttggggccatcacttctagggaggaacgagatttattggaaggccttgtttcc |
210 |
Q |
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| T |
32259860 |
ctttaaatttatatttaagtgaaaaatgtgtgcagggtggaattattttggggccatcacttctagggaggaacgagatttattggaaggccttgtttcc |
32259959 |
T |
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| Q |
211 |
cccaagacaatctgatgttttatcagcgttgtcattactc |
250 |
Q |
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| T |
32259960 |
cccaagacaatctgatgttttatcagtgttgtcattactc |
32259999 |
T |
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