View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2047_high_10 (Length: 282)
Name: NF2047_high_10
Description: NF2047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2047_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 2311106 - 2311392
Alignment:
| Q |
1 |
tcacaattttatgctccctacagcctcaagtatacaatacacagtagtgcacacactata--tagacaaaaacctttaactgg--------agattgaag |
90 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| |
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| T |
2311106 |
tcacaattttatgcttcctacagcctcaagtatacaatacacagtagtgcacacactatagatagacacaaacctttaactggttacacaaagattgaag |
2311205 |
T |
|
| Q |
91 |
ctcataattgtgtatattttatttataatctttccttctctatcttccttatgctatataagccccacccccatcctctcttatcaattgaatcgtgact |
190 |
Q |
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||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
2311206 |
ctcataattgtgtatatttgatttataatcatcccttctctatcttccttatgctatataagccccacgcccatcctctcttatcaattgaatcgtgact |
2311305 |
T |
|
| Q |
191 |
acaattccttcaacttctattataacacatagaattccttcaatttctactatgccactattgaaaccctctttgtcctttgctact |
277 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| |||| |
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| T |
2311306 |
acaattccttcaacttctattatatcacatagaattccttcaatttatactatgccactattgaggccctctttgtccattgttact |
2311392 |
T |
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