View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20480_high_12 (Length: 298)

Name: NF20480_high_12
Description: NF20480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20480_high_12
NF20480_high_12
[»] chr2 (67 HSPs)
chr2 (18-290)||(63328-63601)
chr2 (101-290)||(42192612-42192799)
chr2 (111-290)||(33920981-33921156)
chr2 (111-290)||(42192242-42192416)
chr2 (111-290)||(11539639-11539814)
chr2 (111-288)||(4355757-4355929)
chr2 (111-290)||(20128107-20128281)
chr2 (111-290)||(38008321-38008495)
chr2 (113-290)||(16175719-16175892)
chr2 (102-290)||(11540008-11540191)
chr2 (111-290)||(62959-63133)
chr2 (111-290)||(16952937-16953113)
chr2 (111-290)||(17060908-17061084)
chr2 (111-290)||(38007952-38008127)
chr2 (111-287)||(20127738-20127910)
chr2 (111-290)||(4356126-4356300)
chr2 (112-290)||(13315496-13315673)
chr2 (111-290)||(16953304-16953478)
chr2 (112-290)||(4808882-4809055)
chr2 (112-290)||(9330164-9330338)
chr2 (112-290)||(33920615-33920788)
chr2 (112-288)||(43160012-43160184)
chr2 (111-287)||(6949453-6949625)
chr2 (111-290)||(43216079-43216253)
chr2 (111-290)||(649529-649702)
chr2 (111-290)||(44220013-44220189)
chr2 (111-288)||(43160382-43160555)
chr2 (112-282)||(15550676-15550842)
chr2 (111-290)||(32418161-32418333)
chr2 (111-290)||(4809249-4809423)
chr2 (214-290)||(5560920-5560996)
chr2 (112-290)||(15551044-15551218)
chr2 (111-275)||(24140064-24140218)
chr2 (111-290)||(44219646-44219820)
chr2 (141-282)||(13399454-13399590)
chr2 (111-272)||(31797166-31797321)
chr2 (135-290)||(13399790-13399939)
chr2 (111-290)||(28143400-28143573)
chr2 (111-195)||(25336060-25336144)
chr2 (111-198)||(5560053-5560140)
chr2 (111-198)||(6949901-6949988)
chr2 (112-198)||(20495196-20495282)
chr2 (110-190)||(649802-649882)
chr2 (111-195)||(14942306-14942390)
chr2 (215-290)||(22445741-22445816)
chr2 (218-290)||(9329985-9330056)
chr2 (214-288)||(43215809-43215883)
chr2 (111-256)||(32418550-32418690)
chr2 (111-160)||(20440525-20440574)
chr2 (111-160)||(20444751-20444800)
chr2 (111-160)||(35779710-35779759)
chr2 (119-195)||(2190536-2190612)
chr2 (112-171)||(9329915-9329974)
chr2 (111-162)||(22374817-22374868)
chr2 (255-290)||(25335977-25336012)
chr2 (111-162)||(28616615-28616666)
chr2 (111-162)||(40815347-40815398)
chr2 (112-154)||(3822924-3822966)
chr2 (112-162)||(14432145-14432195)
chr2 (106-160)||(35781157-35781211)
chr2 (111-160)||(11091014-11091063)
chr2 (111-160)||(18450832-18450881)
chr2 (111-160)||(22374322-22374371)
chr2 (111-160)||(26538573-26538622)
chr2 (151-199)||(5037154-5037202)
chr2 (111-159)||(28617109-28617157)
chr2 (112-160)||(40027634-40027682)
[»] chr1 (68 HSPs)
chr1 (99-290)||(17641734-17641925)
chr1 (111-290)||(44954596-44954770)
chr1 (110-290)||(10278549-10278725)
chr1 (110-290)||(34555750-34555927)
chr1 (111-290)||(1837507-1837681)
chr1 (111-290)||(16298684-16298858)
chr1 (112-290)||(21938566-21938739)
chr1 (111-290)||(30786773-30786948)
chr1 (111-290)||(52335880-52336054)
chr1 (111-290)||(29438932-29439107)
chr1 (111-290)||(37505438-37505611)
chr1 (112-290)||(37421163-37421338)
chr1 (111-288)||(2868080-2868252)
chr1 (112-288)||(8230013-8230184)
chr1 (114-288)||(4080026-4080195)
chr1 (101-287)||(1744320-1744500)
chr1 (111-290)||(9992156-9992331)
chr1 (111-290)||(34555381-34555557)
chr1 (111-290)||(443921-444095)
chr1 (110-290)||(44582058-44582233)
chr1 (108-198)||(50304438-50304528)
chr1 (111-290)||(9992525-9992699)
chr1 (111-288)||(10278922-10279091)
chr1 (111-290)||(8229639-8229816)
chr1 (110-280)||(2867912-2868077)
chr1 (111-290)||(23340185-23340359)
chr1 (111-278)||(37505069-37505232)
chr1 (112-290)||(50305152-50305328)
chr1 (106-290)||(50926227-50926408)
chr1 (216-288)||(17641467-17641539)
chr1 (112-290)||(44954229-44954402)
chr1 (215-290)||(6224800-6224875)
chr1 (112-198)||(39485068-39485154)
chr1 (214-287)||(16299055-16299128)
chr1 (111-290)||(50926611-50926785)
chr1 (111-290)||(29021234-29021409)
chr1 (111-198)||(17088596-17088683)
chr1 (110-290)||(44582427-44582604)
chr1 (112-198)||(45048158-45048244)
chr1 (101-198)||(23526650-23526747)
chr1 (113-198)||(25274760-25274845)
chr1 (111-198)||(30787255-30787342)
chr1 (112-198)||(37421401-37421488)
chr1 (111-198)||(44802628-44802715)
chr1 (111-290)||(9833522-9833696)
chr1 (112-198)||(29439379-29439465)
chr1 (112-190)||(45048600-45048678)
chr1 (112-189)||(44291777-44291854)
chr1 (218-290)||(30787142-30787214)
chr1 (110-198)||(44291302-44291390)
chr1 (114-198)||(48174179-48174263)
chr1 (214-290)||(50304882-50304958)
chr1 (111-190)||(17088148-17088227)
chr1 (111-195)||(29020882-29020966)
chr1 (101-160)||(47826955-47827015)
chr1 (111-149)||(9019468-9019506)
chr1 (110-160)||(21856043-21856093)
chr1 (110-160)||(33144413-33144463)
chr1 (111-177)||(50970280-50970345)
chr1 (111-160)||(5539818-5539867)
chr1 (111-160)||(5540312-5540361)
chr1 (111-160)||(8678543-8678592)
chr1 (111-160)||(29307436-29307485)
chr1 (111-160)||(29870113-29870162)
chr1 (111-160)||(39154514-39154563)
chr1 (111-140)||(52268292-52268321)
chr1 (214-274)||(17088526-17088585)
chr1 (110-142)||(52269260-52269292)
[»] chr3 (86 HSPs)
chr3 (111-290)||(330206-330380)
chr3 (111-290)||(51827959-51828133)
chr3 (111-290)||(25534892-25535067)
chr3 (112-287)||(40838655-40838825)
chr3 (112-290)||(40839022-40839195)
chr3 (112-290)||(51473225-51473399)
chr3 (111-290)||(43678297-43678471)
chr3 (111-290)||(47431698-47431873)
chr3 (111-290)||(49951916-49952090)
chr3 (111-290)||(51828541-51828716)
chr3 (111-290)||(51828910-51829084)
chr3 (113-292)||(55389609-55389783)
chr3 (103-290)||(32730759-32730941)
chr3 (111-290)||(40275095-40275271)
chr3 (111-290)||(40275464-40275637)
chr3 (111-290)||(46013424-46013598)
chr3 (111-290)||(46013792-46013967)
chr3 (111-290)||(49720373-49720547)
chr3 (111-290)||(52375701-52375875)
chr3 (111-290)||(55389967-55390141)
chr3 (112-290)||(32730392-32730565)
chr3 (112-290)||(44676842-44677015)
chr3 (112-290)||(49951549-49951722)
chr3 (111-288)||(2044273-2044445)
chr3 (111-288)||(52237189-52237361)
chr3 (111-287)||(43678657-43678828)
chr3 (110-290)||(52236817-52236992)
chr3 (111-290)||(2051297-2051475)
chr3 (111-282)||(38535311-38535477)
chr3 (111-290)||(41998231-41998406)
chr3 (111-288)||(51472857-51473029)
chr3 (103-275)||(22370590-22370758)
chr3 (111-290)||(50662782-50662956)
chr3 (111-290)||(51828327-51828502)
chr3 (111-288)||(38535667-38535839)
chr3 (111-290)||(14654561-14654733)
chr3 (115-290)||(34105018-34105190)
chr3 (111-278)||(44676474-44676636)
chr3 (111-290)||(52375329-52375503)
chr3 (111-198)||(49720818-49720905)
chr3 (110-290)||(30513723-30513898)
chr3 (111-290)||(41998600-41998772)
chr3 (111-281)||(16701168-16701336)
chr3 (110-198)||(36701553-36701641)
chr3 (135-290)||(34104664-34104813)
chr3 (101-284)||(43222765-43222944)
chr3 (111-290)||(37075688-37075864)
chr3 (111-290)||(55192120-55192293)
chr3 (113-290)||(329850-330012)
chr3 (112-290)||(27199705-27199878)
chr3 (112-195)||(16689361-16689444)
chr3 (111-198)||(33412611-33412698)
chr3 (111-198)||(36701108-36701195)
chr3 (111-290)||(43222392-43222566)
chr3 (111-197)||(49407798-49407884)
chr3 (111-198)||(14654201-14654288)
chr3 (111-290)||(39010077-39010250)
chr3 (111-198)||(50900984-50901071)
chr3 (111-184)||(49408252-49408325)
chr3 (232-284)||(14654309-14654361)
chr3 (102-190)||(37076139-37076227)
chr3 (111-160)||(23644464-23644513)
chr3 (111-160)||(30104484-30104533)
chr3 (112-160)||(5136983-5137031)
chr3 (112-160)||(25612471-25612519)
chr3 (111-159)||(27200187-27200235)
chr3 (111-162)||(30098255-30098306)
chr3 (135-190)||(39010486-39010541)
chr3 (112-198)||(8874143-8874229)
chr3 (111-149)||(27393663-27393701)
chr3 (111-149)||(37220559-37220597)
chr3 (111-157)||(43973443-43973489)
chr3 (111-160)||(4275858-4275907)
chr3 (112-189)||(8873694-8873770)
chr3 (111-160)||(20840562-20840611)
chr3 (111-160)||(24301050-24301099)
chr3 (111-160)||(25853236-25853285)
chr3 (111-160)||(29801910-29801959)
chr3 (111-160)||(31779146-31779195)
chr3 (111-160)||(32535457-32535506)
chr3 (111-160)||(39555580-39555629)
chr3 (111-160)||(39556071-39556120)
chr3 (111-159)||(5137476-5137524)
chr3 (110-154)||(25420641-25420685)
chr3 (111-159)||(43973935-43973983)
chr3 (214-274)||(50900633-50900692)
[»] chr4 (74 HSPs)
chr4 (111-289)||(56077695-56077868)
chr4 (110-290)||(34789752-34789928)
chr4 (111-291)||(46737024-46737199)
chr4 (111-290)||(34789384-34789558)
chr4 (111-290)||(34807118-34807293)
chr4 (112-290)||(14439831-14440004)
chr4 (112-290)||(45838917-45839092)
chr4 (111-290)||(55677327-55677502)
chr4 (111-286)||(21034237-21034408)
chr4 (111-290)||(21034606-21034781)
chr4 (110-290)||(24851835-24852011)
chr4 (110-290)||(54440939-54441114)
chr4 (111-290)||(14440198-14440372)
chr4 (111-290)||(28465451-28465625)
chr4 (110-290)||(54440572-54440745)
chr4 (111-287)||(33689831-33690001)
chr4 (99-277)||(19528859-19529033)
chr4 (112-290)||(41114160-41114335)
chr4 (111-290)||(12593393-12593567)
chr4 (111-290)||(26974285-26974460)
chr4 (110-290)||(28465082-28465257)
chr4 (111-290)||(45838549-45838723)
chr4 (112-290)||(6616675-6616849)
chr4 (112-288)||(36168332-36168506)
chr4 (112-290)||(41608377-41608551)
chr4 (111-288)||(12593026-12593198)
chr4 (111-288)||(46736657-46736829)
chr4 (214-288)||(24851565-24851639)
chr4 (112-290)||(229529-229702)
chr4 (112-290)||(28166007-28166180)
chr4 (214-290)||(35643667-35643743)
chr4 (112-290)||(16214865-16215038)
chr4 (123-290)||(35193322-35193483)
chr4 (214-290)||(34807509-34807585)
chr4 (112-290)||(229164-229337)
chr4 (111-290)||(19529063-19529238)
chr4 (217-290)||(36168701-36168774)
chr4 (115-195)||(30597979-30598059)
chr4 (111-198)||(41608872-41608959)
chr4 (99-280)||(18965130-18965306)
chr4 (110-197)||(1397596-1397683)
chr4 (111-198)||(23986522-23986609)
chr4 (111-198)||(24851318-24851405)
chr4 (101-175)||(35644042-35644116)
chr4 (110-175)||(44219376-44219441)
chr4 (110-290)||(33777992-33778157)
chr4 (111-198)||(51309962-51310049)
chr4 (112-198)||(6617119-6617205)
chr4 (233-283)||(18965513-18965563)
chr4 (112-198)||(26974702-26974788)
chr4 (112-198)||(33777635-33777721)
chr4 (112-197)||(10795769-10795854)
chr4 (111-195)||(24336223-24336307)
chr4 (135-198)||(17504416-17504479)
chr4 (111-198)||(40160096-40160183)
chr4 (111-160)||(20958353-20958402)
chr4 (214-290)||(17504074-17504149)
chr4 (111-190)||(35193767-35193846)
chr4 (135-198)||(35643581-35643644)
chr4 (110-160)||(18764014-18764064)
chr4 (111-185)||(36168801-36168875)
chr4 (112-190)||(40160555-40160633)
chr4 (110-160)||(46193899-46193949)
chr4 (111-160)||(11153641-11153690)
chr4 (111-160)||(15523237-15523286)
chr4 (241-290)||(17504329-17504378)
chr4 (111-160)||(23494937-23494986)
chr4 (111-184)||(24335763-24335836)
chr4 (216-273)||(24335864-24335920)
chr4 (111-160)||(25447249-25447298)
chr4 (111-160)||(46193407-46193456)
chr4 (99-160)||(51021289-51021350)
chr4 (111-143)||(22170447-22170479)
chr4 (111-159)||(44892643-44892691)
[»] chr8 (47 HSPs)
chr8 (111-290)||(28254796-28254970)
chr8 (112-290)||(18428131-18428305)
chr8 (114-290)||(18049595-18049767)
chr8 (111-290)||(35427182-35427356)
chr8 (110-290)||(28254426-28254602)
chr8 (111-290)||(9796728-9796902)
chr8 (111-290)||(34799081-34799256)
chr8 (111-290)||(34799453-34799627)
chr8 (111-290)||(41260631-41260805)
chr8 (112-290)||(9797096-9797270)
chr8 (111-285)||(15256203-15256375)
chr8 (111-290)||(42035774-42035948)
chr8 (111-286)||(599534-599704)
chr8 (111-290)||(16578466-16578640)
chr8 (111-289)||(6115481-6115655)
chr8 (112-290)||(18049961-18050134)
chr8 (111-290)||(7910986-7911160)
chr8 (111-291)||(599867-600042)
chr8 (110-290)||(5731182-5731357)
chr8 (111-290)||(35693870-35694046)
chr8 (111-287)||(42036144-42036316)
chr8 (111-282)||(15255855-15256011)
chr8 (112-288)||(35694242-35694421)
chr8 (111-276)||(5730819-5730979)
chr8 (111-252)||(41260273-41260409)
chr8 (111-290)||(16578110-16578285)
chr8 (163-287)||(26252863-26252982)
chr8 (110-290)||(2208715-2208891)
chr8 (233-290)||(35163817-35163874)
chr8 (111-195)||(7910618-7910702)
chr8 (112-194)||(28877350-28877432)
chr8 (218-290)||(35426917-35426989)
chr8 (111-198)||(18674150-18674237)
chr8 (111-162)||(33742924-33742975)
chr8 (111-160)||(9930151-9930200)
chr8 (111-162)||(13225131-13225182)
chr8 (136-198)||(10047093-10047155)
chr8 (235-288)||(7910738-7910791)
chr8 (111-160)||(11656457-11656506)
chr8 (111-160)||(11656951-11657000)
chr8 (111-160)||(31133222-31133271)
chr8 (111-160)||(34541042-34541091)
chr8 (111-160)||(41681136-41681185)
chr8 (112-160)||(9928912-9928960)
chr8 (111-159)||(12571865-12571913)
chr8 (112-184)||(18805167-18805238)
chr8 (112-160)||(35426845-35426893)
[»] chr7 (60 HSPs)
chr7 (111-290)||(24929673-24929852)
chr7 (111-290)||(9181534-9181708)
chr7 (111-290)||(15712367-15712541)
chr7 (99-290)||(25637568-25637754)
chr7 (111-290)||(25637199-25637374)
chr7 (111-290)||(48247961-48248136)
chr7 (112-290)||(787152-787329)
chr7 (112-290)||(28687869-28688041)
chr7 (111-290)||(9181779-9181956)
chr7 (111-290)||(11971336-11971514)
chr7 (111-290)||(48247589-48247767)
chr7 (111-290)||(7732490-7732664)
chr7 (111-290)||(27245205-27245380)
chr7 (112-290)||(5745642-5745815)
chr7 (111-290)||(16081301-16081475)
chr7 (112-290)||(26026320-26026494)
chr7 (111-288)||(16081671-16081843)
chr7 (111-288)||(26048319-26048490)
chr7 (112-290)||(11973772-11973945)
chr7 (111-291)||(2758067-2758242)
chr7 (111-290)||(39388636-39388812)
chr7 (115-290)||(35161171-35161342)
chr7 (101-290)||(27245574-27245758)
chr7 (112-288)||(14311659-14311830)
chr7 (111-288)||(786784-786957)
chr7 (111-271)||(28687595-28687750)
chr7 (111-290)||(34595142-34595316)
chr7 (111-290)||(5746009-5746184)
chr7 (111-290)||(7732857-7733031)
chr7 (110-198)||(5334276-5334364)
chr7 (112-290)||(26026688-26026861)
chr7 (111-198)||(5333882-5333969)
chr7 (215-290)||(14311417-14311492)
chr7 (111-198)||(16917715-16917802)
chr7 (110-290)||(34594584-34594758)
chr7 (111-197)||(39136991-39137077)
chr7 (233-290)||(26048067-26048124)
chr7 (111-198)||(49064036-49064123)
chr7 (118-198)||(18535340-18535419)
chr7 (111-198)||(39136688-39136775)
chr7 (111-198)||(9394187-9394273)
chr7 (218-289)||(35160906-35160976)
chr7 (214-276)||(33880969-33881030)
chr7 (111-198)||(45815346-45815430)
chr7 (110-190)||(9393737-9393817)
chr7 (102-198)||(26047950-26048046)
chr7 (111-195)||(33880622-33880706)
chr7 (111-198)||(4477704-4477791)
chr7 (111-190)||(35579350-35579429)
chr7 (112-162)||(19830423-19830473)
chr7 (216-274)||(32427406-32427463)
chr7 (111-160)||(19590527-19590576)
chr7 (111-160)||(34533793-34533842)
chr7 (111-160)||(35288905-35288954)
chr7 (111-160)||(38859135-38859184)
chr7 (112-160)||(5184431-5184479)
chr7 (214-274)||(9394117-9394176)
chr7 (110-198)||(14311316-14311404)
chr7 (111-143)||(23952732-23952764)
chr7 (116-160)||(35160660-35160704)
[»] chr5 (53 HSPs)
chr5 (111-290)||(4967139-4967315)
chr5 (111-290)||(15029679-15029853)
chr5 (111-290)||(21371066-21371240)
chr5 (111-290)||(28290014-28290188)
chr5 (111-290)||(18150093-18150268)
chr5 (111-288)||(28289686-28289858)
chr5 (113-290)||(38900648-38900818)
chr5 (111-290)||(19291358-19291533)
chr5 (111-290)||(15115465-15115636)
chr5 (112-290)||(4966819-4966991)
chr5 (111-290)||(8418991-8419164)
chr5 (111-290)||(32697593-32697770)
chr5 (98-290)||(22651334-22651521)
chr5 (112-198)||(20266372-20266458)
chr5 (214-290)||(5161683-5161759)
chr5 (111-190)||(10721788-10721867)
chr5 (111-198)||(18149735-18149822)
chr5 (110-290)||(39083360-39083536)
chr5 (214-288)||(14340480-14340554)
chr5 (111-282)||(38901020-38901184)
chr5 (112-282)||(14340785-14340953)
chr5 (112-189)||(14340401-14340478)
chr5 (250-290)||(22651715-22651755)
chr5 (110-198)||(28595181-28595269)
chr5 (111-198)||(17260677-17260764)
chr5 (111-198)||(22651768-22651855)
chr5 (111-190)||(41834524-41834603)
chr5 (218-288)||(21370798-21370870)
chr5 (111-192)||(28495294-28495375)
chr5 (111-195)||(5162029-5162113)
chr5 (122-198)||(32305831-32305907)
chr5 (111-198)||(16752584-16752671)
chr5 (111-186)||(27307063-27307138)
chr5 (112-198)||(21370689-21370775)
chr5 (111-160)||(164193-164242)
chr5 (128-189)||(13557011-13557072)
chr5 (110-159)||(16753066-16753115)
chr5 (111-160)||(24362330-24362379)
chr5 (237-290)||(32697458-32697511)
chr5 (214-274)||(41834445-41834504)
chr5 (101-160)||(2865249-2865308)
chr5 (101-140)||(14215233-14215272)
chr5 (120-195)||(20260936-20261011)
chr5 (111-198)||(27307517-27307604)
chr5 (111-160)||(5819423-5819472)
chr5 (111-160)||(8647440-8647489)
chr5 (111-160)||(18183463-18183512)
chr5 (111-160)||(19359630-19359679)
chr5 (111-160)||(24331561-24331610)
chr5 (112-160)||(5818932-5818980)
chr5 (214-274)||(10721886-10721945)
chr5 (112-160)||(15372367-15372415)
chr5 (214-274)||(27307161-27307220)
[»] chr6 (41 HSPs)
chr6 (111-290)||(25472382-25472557)
chr6 (111-290)||(31073512-31073686)
chr6 (111-290)||(31574095-31574269)
chr6 (112-290)||(25468852-25469027)
chr6 (111-290)||(5114470-5114644)
chr6 (111-281)||(5120848-5121013)
chr6 (112-290)||(24640555-24640728)
chr6 (111-287)||(30251064-30251236)
chr6 (111-290)||(31573722-31573901)
chr6 (214-290)||(28636566-28636642)
chr6 (111-290)||(29891082-29891256)
chr6 (214-287)||(29891453-29891526)
chr6 (111-289)||(35163557-35163731)
chr6 (111-198)||(28636294-28636381)
chr6 (111-160)||(22534219-22534268)
chr6 (111-188)||(31073145-31073222)
chr6 (112-190)||(35163187-35163265)
chr6 (214-290)||(30250791-30250867)
chr6 (111-198)||(33095716-33095803)
chr6 (98-198)||(835383-835483)
chr6 (112-184)||(22534068-22534139)
chr6 (111-197)||(32836454-32836540)
chr6 (111-160)||(10900424-10900473)
chr6 (102-175)||(18297669-18297742)
chr6 (111-160)||(28472639-28472688)
chr6 (111-160)||(29859828-29859877)
chr6 (214-254)||(31073250-31073290)
chr6 (110-140)||(29033435-29033465)
chr6 (112-198)||(31242809-31242895)
chr6 (111-160)||(11445481-11445530)
chr6 (111-160)||(12935159-12935208)
chr6 (111-160)||(15828135-15828184)
chr6 (111-160)||(18257631-18257680)
chr6 (111-160)||(20741102-20741151)
chr6 (111-160)||(22219847-22219896)
chr6 (111-160)||(23074001-23074050)
chr6 (111-160)||(23075622-23075671)
chr6 (111-160)||(29891579-29891628)
chr6 (111-160)||(30250723-30250772)
chr6 (112-160)||(3835220-3835268)
chr6 (112-160)||(18504922-18504970)
[»] scaffold0097 (2 HSPs)
scaffold0097 (111-290)||(46268-46443)
scaffold0097 (111-290)||(46637-46812)
[»] scaffold0712 (2 HSPs)
scaffold0712 (111-290)||(6394-6568)
scaffold0712 (112-290)||(6761-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (111-290)||(6412-6586)
scaffold0709 (112-290)||(6779-6957)
[»] scaffold0007 (4 HSPs)
scaffold0007 (111-198)||(210794-210881)
scaffold0007 (111-198)||(205824-205911)
scaffold0007 (112-198)||(204931-205017)
scaffold0007 (112-198)||(205361-205447)
[»] scaffold0025 (1 HSPs)
scaffold0025 (214-290)||(78417-78493)
[»] scaffold1432 (1 HSPs)
scaffold1432 (111-198)||(522-609)
[»] scaffold0108 (1 HSPs)
scaffold0108 (111-198)||(15555-15642)
[»] scaffold0295 (2 HSPs)
scaffold0295 (111-160)||(4795-4844)
scaffold0295 (110-162)||(5283-5335)


Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 290
Target Start/End: Complemental strand, 63601 - 63328
Alignment:
Q  18 agtgtatgaatgtaaatattaataaagaacatagagtgagtgagtacggagggagggtgggagagatgagatgtaaatgagataaaaaataaacttaatt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||| ||||||||||||||||||||||||   ||||||    
T  63601 agtgtatgaatgtaaatattaataaagaacatagagtgagtgagaacagagggagagtgggagagaggagatgtaaatgagataaaaaataggtttaatt 63502  T
Q  118 acacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatg-nnnnnnnnnnngca 216  Q
    | | |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||            |||    
T  63501 atatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactatatgttttttttttttgca 63402  T
Q  217 gttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  63401 gttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 63328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 101 - 290
Target Start/End: Complemental strand, 42192799 - 42192612
Alignment:
Q  101 aaaaaataaa--cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||    
T  42192799 aaaaaataaaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 42192700  T
Q  199 aatgnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
     |||           |||||||||||| ||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  42192699 gatg----tttttttgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 42192612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 33921156 - 33920981
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||  |||||||||||            
T  33921156 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgttttttt- 33921058  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33921057 ---gcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 33920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 42192242 - 42192416
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||| || |||||||||||| ||||||||||||||||||||| |||            
T  42192242 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-----ttt 42192336  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  42192337 tttgcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 42192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 11539639 - 11539814
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||| | ||||||||| ||||||||||||| ||||||| |||            
T  11539639 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgttttttt- 11539737  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11539738 ---gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 11539814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 111 - 288
Target Start/End: Original strand, 4355757 - 4355929
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||| ||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  4355757 cttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-- 4355854  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4355855 ---gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatg 4355929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 20128281 - 20128107
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||| ||||||||| |||| ||||| || |||||||||||||||||||||||||| ||||||| |||            
T  20128281 cttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatgtttttt-- 20128184  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  20128183 ---gcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 20128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 38008495 - 38008321
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  38008495 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 38008398  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  38008397 ---gcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttagtccaaccacctatgct 38008321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 113 - 290
Target Start/End: Complemental strand, 16175892 - 16175719
Alignment:
Q  113 taattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnn 212  Q
    |||||||||||||||||||   ||||| ||||||||| |||| ||||| || |||||||||||| ||||||||||||| ||||||| |||              
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttt--- 16175796  T
Q  213 ngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
     |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16175795 -gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 16175719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 290
Target Start/End: Complemental strand, 11540191 - 11540008
Alignment:
Q  102 aaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaat 201  Q
    |||||||  |||||||| |||||||||| ||| ||||||||||||||| |||||||||| || |||||||||||| ||||||||||||| ||||||| ||    
T  11540191 aaaaataggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 11540092  T
Q  202 gnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |           |||||||||||| ||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  11540091 gtttttt-----gcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 11540008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 62959 - 63133
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||| |||||||   ||||||||||||||| |||||||||| || || ||| ||||| ||||||||||||| ||||||| |||            
T  62959 cttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgtttttt-- 63056  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  63057 ---gcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttagtccaaccacctatgct 63133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 16952937 - 16953113
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| ||||||||||||   ||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||| ||||||| |||            
T  16952937 cttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttt 16953036  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       || ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  16953037 ---gcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 16953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 17060908 - 17061084
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| ||||||||||||   ||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||| ||||||| |||            
T  17060908 cttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttt 17061007  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       || ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  17061008 ---gcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 17061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 38007952 - 38008127
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  38007952 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg----tttt 38008047  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| |||||||||||||| | ||||||||| |||||||||||||| ||||||| ||||||||    
T  38008048 tttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttaatccaaccgcctatgct 38008127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 287
Target Start/End: Original strand, 20127738 - 20127910
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||| ||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  20127738 cttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt- 20127836  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
       |||||||||||||||||| |||||||||||| | ||||||||||| |||||||| |||||||||||||||||||    
T  20127837 ---gcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttagtccaaccacctat 20127910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 4356300 - 4356126
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| || ||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  4356300 cttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 4356203  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||| | |||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  4356202 ---gcagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4356126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 13315496 - 13315673
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||| |||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||             
T  13315496 ttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 13315595  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaac-gcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| |||||||||||||| |||||  ||||| |||||||||||||||||||||||||||||||    
T  13315596 --gcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaaccacctatgct 13315673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 16953478 - 16953304
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| |||||||  ||||||||| || |||            
T  16953478 cttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgtttttt-- 16953381  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||    
T  16953380 ---gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccaactatgct 16953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 4808882 - 4809055
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| |||| || || | ||||||||||||||| |||| || || || |||||||||||| ||||||||||||| ||||||| |||             
T  4808882 ttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt--- 4808978  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  4808979 --gtagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 9330338 - 9330164
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||||||||| | ||||||||||||||| |||| | ||| || |||||||||||| |||||||||||||| |||||| |||             
T  9330338 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgttttttt-- 9330241  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| ||||||| ||||| ||||||| || | |||||||||||||||||||||||||||||||    
T  9330240 --gcagttttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtccaaccacctatgct 9330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 33920615 - 33920788
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| |||||||||| | ||||||||||||||| |||| || || || |||||||||||| ||||||||||||||||||||| |||             
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgattttt--- 33920711  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| ||||||| |||||| ||||||||| | ||||||||||||||||||| |||||||||||    
T  33920712 --gcagttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttagtccagccacctatgct 33920788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 112 - 288
Target Start/End: Original strand, 43160012 - 43160184
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| |||||||||| | ||||||| ||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |               
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactata----cattttt 43160107  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
      |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  43160108 ttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatg 43160184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 287
Target Start/End: Original strand, 6949453 - 6949625
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| ||||||||||   |||||||| |||||| |||||||||| ||||| ||||||||| ||||||||||||| | ||||| |||            
T  6949453 cttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgttttttt- 6949551  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
       |||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||    
T  6949552 ---gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctat 6949625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 43216253 - 43216079
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||| ||||| |  |||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| ||             
T  43216253 cttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-----attt 43216159  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||||||||  ||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||    
T  43216158 tttgcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaaccacctatgct 43216079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 649529 - 649702
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | || |||||||||| | |||| ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  649529 cttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-----ttt 649623  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||| || ||| |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  649624 tttgcagttttagttctgtctccctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 649702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 44220189 - 44220013
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||| || || ||||||||||||||||||||||||||||||| |||            
T  44220189 cttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatg-----ttt 44220095  T
Q  211 nnngcagttttagtcctatct--tcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       | |||||||||| |||||   |||||||||||||| ||||||| ||| |||||| | ||||||||||||||||||||||    
T  44220094 tttgtagttttagtcatatctccccctatttccaactccagaaacgtacaaaaatgataattttagtccaaccacctatgct 44220013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 111 - 288
Target Start/End: Complemental strand, 43160555 - 43160382
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||| ||||||   |||||||| |||||| |||||||||| ||||| ||||||||| ||| ||||||||| ||||||| |||            
T  43160555 cttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgttttttt- 43160457  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||    
T  43160456 ---gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccatctatg 43160382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 112 - 282
Target Start/End: Original strand, 15550676 - 15550842
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||| |||| | ||| ||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |||             
T  15550676 ttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg----ttttt 15550771  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaacca 282  Q
      |||||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||| ||||||    
T  15550772 ttgcagttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagttttagttcaacca 15550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 32418161 - 32418333
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||| ||||| || ||||||  |||| ||||||||||||||||||||| ||             
T  32418161 cttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatat-----attt 32418253  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| | |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  32418254 tttgcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaaccacctatgct 32418333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 4809423 - 4809249
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   |||||||| |||||| |||||||||| ||| | ||||||||  |||||| |||||| ||||||| |||            
T  4809423 cttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatgtttttt-- 4809326  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||  | ||| ||||| |||||||||||||||||||||||||||||||    
T  4809325 ---gcagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaaccacctatgct 4809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 5560996 - 5560920
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  5560996 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 5560920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 15551218 - 15551044
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||||| |||   |||||||||||||||  ||||||||| ||| | ||||||||| ||||||||||||| |||  || |||             
T  15551218 ttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgttttttt-- 15551121  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| |||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||    
T  15551120 --gcagttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaaccacatatgct 15551044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 275
Target Start/End: Complemental strand, 24140218 - 24140064
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||||| || |||||||||||| |||||||||| || || ||||||||||||||||||||||| ||||||| ||             
T  24140218 cttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactatat--------- 24140128  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagt 275  Q
       ||||||||||| |||| | |||||||||||||| ||||||||||| |||||||| |||||||    
T  24140127 -ttgcagttttagttctatatccctatttccaactccagaaacgcacagaaatgacatttttagt 24140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 44219646 - 44219820
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||| |||||||  |||||| || || || ||||||||| |||||||| |||| |||| || |||            
T  44219646 cttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgtttttt-- 44219743  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  44219744 ---gcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 44219820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 282
Target Start/End: Original strand, 13399454 - 13399590
Alignment:
Q  141 accaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnnngcagttttagtcctatcttcctatttc 240  Q
    ||||| ||| |||| ||||| || |||||||||||  ||||||||||||||||||||| |||           |||||||||||||||||| ||||||||    
T  13399454 accaattcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatgtttttt-----gcagttttagtcctatctccctatttc 13399548  T
Q  241 caactctagaaacgcacataaatgacagttttagtccaacca 282  Q
    |||||| ||||||||||| ||||||||||||||||| |||||    
T  13399549 caactccagaaacgcacagaaatgacagttttagtctaacca 13399590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 272
Target Start/End: Complemental strand, 31797321 - 31797166
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||  |||||||||| |||| |||||||||| |  |||||| ||||| ||||||| ||||||||||||| |||            
T  31797321 cttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatg-----ttt 31797227  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagtttt 272  Q
       ||||||||||||||| | |||||||| |||||||||||||||| | |||||||||||||    
T  31797226 tttgcagttttagtccta-cctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 290
Target Start/End: Complemental strand, 13399939 - 13399790
Alignment:
Q  135 attttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnnngcagttttagtcctatcttcc 234  Q
    ||||||||||||||| ||||||||||| || ||||||||||| |||||||| |||| ||||||| ||            |||||||||||| ||||| ||    
T  13399939 attttgaccaactcacgaaaatggtct-atttcttttaaatcgaacaaaattgtccttaaactatat-----attttttgcagttttagtcatatctccc 13399846  T
Q  235 tatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||| | ||||||| | |||||||||||||| ||||||||||||||||    
T  13399845 tatttccaactccataaacgcatagaaatgacagttttaatccaaccacctatgct 13399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 28143573 - 28143400
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta-aatgnnnnnnn 209  Q
    ||||||| ||||||||||||||| |||||||||| |||| |||||||||| |  |||||| ||||| |||||||||||||||||||||  |||           
T  28143573 cttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg------t 28143480  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||||||| | |||||||| |||||| ||||||||| | ||||||||||||||| || ||| ||||||||    
T  28143479 ttttgcagttttagtccta-cgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 25336144 - 25336060
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| ||  ||||||||||| ||||||||||||||||||    
T  25336144 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaa 25336060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 5560053 - 5560140
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||  ||||||||||||| |||||||    
T  5560053 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaacta 5560140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 6949988 - 6949901
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| ||  ||||||||||  |||||||||||||||||||||    
T  6949988 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaacta 6949901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 20495196 - 20495282
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||| |||||||||| |||| ||||||||||||||| ||||||| || |  |||||||||||| |||||||||||||||||||||    
T  20495196 ttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaacta 20495282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 649882 - 649802
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    ||||||||||||||||||||||   ||||||||||||||| |||||||||| ||| | ||||||||| |||||||||||||    
T  649882 acttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcc 649802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 14942390 - 14942306
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    ||||||||||||||||||| ||| |||||||||| |||| |||||||||||| ||||||| ||||| |||||||| |||| ||||    
T  14942390 cttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaa 14942306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 22445741 - 22445816
Alignment:
Q  215 cagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||| |||||| ||||||| |||||  |||||| |||||||||||||||||||||| |||||||||||||    
T  22445741 cagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaaccacctatgct 22445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 9329985 - 9330056
Alignment:
Q  218 ttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||||| | |||||||||||||||||||||||| |||||||||||| ||| ||||||| ||||||    
T  9329985 ttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcagt-caaccacttatgct 9330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 43215809 - 43215883
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
    |||||||||||| ||||| ||||||| |||||| | ||||| | | |||||||||||||||||||||||||||||    
T  43215809 gcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccacctatg 43215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 32418690 - 32418550
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| ||||||||||||   ||||||||||| ||| |||| || |  || |||||||||||| ||||||||||||| ||||||| ||             
T  32418690 cttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactatat-----attt 32418596  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgca 256  Q
       ||||||||| || ||||| ||||||||||||||||||||||||    
T  32418595 tttgcagttttaatcttatctccctatttccaactctagaaacgca 32418550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 20440574 - 20440525
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  20440574 cttaattacacttttggtcctcgtgttttggccaactcacgaaactggtc 20440525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 20444751 - 20444800
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  20444751 cttaattacacttttggtcctcgtgttttggccaactcacgaaactggtc 20444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 35779710 - 35779759
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| |||||||  ||||| ||||||||||    
T  35779710 cttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtc 35779759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 2190612 - 2190536
Alignment:
Q  119 cacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    ||||||||||| ||| |||||||||| |||| |||| ||||| |  || ||| ||||| ||||||||||||||||||    
T  2190612 cacttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaa 2190536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 9329915 - 9329974
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctctttt 171  Q
    ||||||||||||||||||||   |||||||||||||||  ||||||||| ||||| ||||    
T  9329915 ttaattacacttttggtcctacaattttgaccaactcacaaaaatggtcctatctttttt 9329974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 22374868 - 22374817
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtctt 162  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||||    
T  22374868 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtctt 22374817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 290
Target Start/End: Complemental strand, 25336012 - 25335977
Alignment:
Q  255 cacataaatgacagttttagtccaaccacctatgct 290  Q
    ||||||||||||| ||||||||||||||||||||||    
T  25336012 cacataaatgacacttttagtccaaccacctatgct 25335977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 28616615 - 28616666
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtctt 162  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||||    
T  28616615 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtctt 28616666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 40815347 - 40815398
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtctt 162  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtctt 40815398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 3822924 - 3822966
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaa 154  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaa 3822966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 14432145 - 14432195
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtctt 162  Q
    ||||||||||||||||||||||| ||||| || ||||| |||| |||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtctt 14432195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 35781211 - 35781157
Alignment:
Q  106 ataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||| |||||||||||||||| ||||||| ||||| || ||||| ||||||||||    
T  35781211 ataagcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtc 35781157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 11091063 - 11091014
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  11091063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 11091014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 18450832 - 18450881
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  18450832 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 18450881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 22374322 - 22374371
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  22374322 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 22374371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 26538622 - 26538573
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  26538622 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 26538573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 5037202 - 5037154
Alignment:
Q  151 gaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaa 199  Q
    |||||||||| |  |||||||||||  ||||||||||||||||||||||    
T  5037202 gaaaatggtcatgcctcttttaaattgaacaaaatcgtccctaaactaa 5037154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 28617157 - 28617109
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggt 159  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| ||||    
T  28617157 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 28617109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 40027682 - 40027634
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 40027634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 7e-49; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 99 - 290
Target Start/End: Complemental strand, 17641925 - 17641734
Alignment:
Q  99 ataaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||| | | |||||||||||||||||||||| ||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||    
T  17641925 ataaaaaaaagatttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaacta 17641826  T
Q  199 aatgnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |            |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  17641825 tttttatttttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgct 17641734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 44954770 - 44954596
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| || || || ||||||||||||||||||| ||| ||||||| |||            
T  44954770 cttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatgtttttt-- 44954673  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  44954672 ---gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaaccacctatgct 44954596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 10278549 - 10278725
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| || || || |||||||||||| ||||||||||||||||||||| |||           
T  10278549 acttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatg----ttt 10278644  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||||||||| || |||| |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10278645 ttttgcagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 10278725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 110 - 290
Target Start/End: Complemental strand, 34555927 - 34555750
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||||||||||| |||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||           
T  34555927 acttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt 34555828  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  34555827 t---gcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 34555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 1837507 - 1837681
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||| ||||||| |||| || || ||||||||||||||| |||||||| |||||||||||| |||            
T  1837507 cttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatgtttttt-- 1837604  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1837605 ---gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 1837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 16298684 - 16298858
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| |||||| ||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  16298684 cttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-- 16298781  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  16298782 ---gcagttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagttttagtccaaccacctatgct 16298858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 21938566 - 21938739
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||||||| |   ||||||| ||||||| ||||||| |||||||| ||||||||| ||||||||||||| ||||||| |||             
T  21938566 ttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatgtttttt--- 21938662  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  21938663 --gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 21938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 30786773 - 30786948
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaat-ggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||||||||||||| || | ||||||||||||||| |||||| |||| || |||||||||||| ||||||||||||||||||||| |||           
T  30786773 cttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-----tt 30786867  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||||||||| |||||||||||||| | ||||||||| ||||||| |||||||||||||||| ||||||    
T  30786868 ttttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttagtccaaccacttatgct 30786948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 52336054 - 52335880
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||| |||||||| ||   ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| ||             
T  52336054 cttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-----tttt 52335960  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  52335959 tttgcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 52335880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 29438932 - 29439107
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| |||||||||||||||||||||||||            
T  29438932 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatg----tttt 29439027  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||||||||  |||||| ||| || | |||| |||| |||| ||||||||||||||||||||||||||    
T  29439028 tttgcagttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacagttttagtccaaccacctatgct 29439107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 37505611 - 37505438
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| | ||||||||||  |||||||||||||||| |||| || || ||||||||||||| ||||||||||||||| ||||||| |||            
T  37505611 cttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatgttttt--- 37505515  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| ||||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  37505514 ---gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgct 37505438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 37421163 - 37421338
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||||||| | | ||||||||||| ||| |||| |||||||| |||||||||||| ||||||||||||||||||||| |||             
T  37421163 ttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg---tttttt 37421259  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||| ||| | |||||||||||||| | ||||||||| ||||||||||||||||| |||||||||||||    
T  37421260 ttgcagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagttttagtctaaccacctatgct 37421338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 111 - 288
Target Start/End: Complemental strand, 2868252 - 2868080
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||||  |||||||||||| || |||||||||| || |||||||||||| |||||||||||||||| |||| |||            
T  2868252 cttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatg-----ttt 2868158  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||||||||||| ||||  |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  2868157 tttgcagttttagtcatatccccctatttccaactccagaaacgcacataagtgacagttttagtccaaccacatatg 2868080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 288
Target Start/End: Complemental strand, 8230184 - 8230013
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| ||||||| |||| ||||||||| | ||| |||||||||  || |||||||||||| ||||||||||||||||||||| |||             
T  8230184 ttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--- 8230088  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
      |||||||||||| ||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  8230087 --gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatg 8230013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 114 - 288
Target Start/End: Original strand, 4080026 - 4080195
Alignment:
Q  114 aattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnnn 213  Q
    |||||||||||||||||| | || |||||||||||| |||| || || || || ||||||||| ||||||||||||||||||||| |||               
T  4080026 aattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatgtttttta---- 4080121  T
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
     ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  4080122 -cagttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccatctatg 4080195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 287
Target Start/End: Original strand, 1744320 - 1744500
Alignment:
Q  101 aaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaa 200  Q
    |||||| || ||||||||||||||||||| |||||||||||| |||||| | ||||| || || || |||  | ||||| |||||||||||||||||| |    
T  1744320 aaaaaaaaaccttaattacacttttggtcttcgtattttgacaaactcacgtaaatgatcctaccttttt--agtcaaataaaatcgtccctaaactata 1744417  T
Q  201 tgnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
    |            |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1744418 t----atttttttgcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctat 1744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 9992156 - 9992331
Alignment:
Q  111 cttaattacacttttggtcctcgtatttt-gaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||||||||||||||||   ||||| |||||||||| | |||||||| ||||| ||||||||| |||||||| |||| ||||||| |||           
T  9992156 cttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatgtttttt- 9992254  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||||| ||||||||||||    
T  9992255 ----gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccgaccacctatgct 9992331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 34555381 - 34555557
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | |||||||| |||||  |||| ||||  || |||||||||||| ||||||||||||||||||||| |||            
T  34555381 cttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttt 34555480  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||| ||||||| ||||||    
T  34555481 a---cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagttcaaccacatatgct 34555557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 444095 - 443921
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| ||||||| || | | ||||||||||||||| |||| | ||| || |||||||||||| ||||||||||| ||||||||| |||            
T  444095 cttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatgtttttt-- 443998  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| ||||||||||| || | |||||| ||||||||||||||||||||||||||||||||||    
T  443997 ---gcagttttagtcctatctccctatttccaattccataaacgcgcataaatgacagttttagtccaaccacctatgct 443921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 44582058 - 44582233
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||||||||||||||||   ||||||||||||| | |||| ||||| || |||||||||||| |||||||||||| ||||| || |||           
T  44582058 acttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatgtttttt- 44582156  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||||||||||   | |||||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  44582157 ----gcagttttagtcctatctctttgtttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 44582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 50304438 - 50304528
Alignment:
Q  108 aaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||| || |||||||||||| |||||||||||| ||||||||    
T  50304438 aaacttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaacta 50304528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 9992699 - 9992525
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | |||||||| |||||| |||||||||| ||||| ||||||||| ||||||||||| | ||||||| |||            
T  9992699 cttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatg-----ttt 9992605  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||| |||||||||||| ||||||| |||||| ||||||||  | |||||||||||||| |||||||| |||||||    
T  9992604 tttgcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaaccatctatgct 9992525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 288
Target Start/End: Complemental strand, 10279091 - 10278922
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| ||||    |||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  10279091 cttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt---- 10278996  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
        ||||||||||||||||| | ||| |||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  10278995 ----cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttagtccaaccacatatg 10278922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 8229639 - 8229816
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||||  ||||||| ||||||| ||||||| |  ||  ||||||||||| || ||||||||| |||||||| |||            
T  8229639 cttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatgtttttttt 8229738  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||| || ||||||    
T  8229739 t--gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgct 8229816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 280
Target Start/End: Original strand, 2867912 - 2868077
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||||| |||||||| ||| ||||||||||||||| ||||||| || ||||||||||||||| |||||||| |||  ||||||| |||           
T  2867912 acttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatg-----tt 2868006  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaac 280  Q
        |||||||||||| ||| | ||||| || ||||| | |||||||||||||||||||||||||||||||    
T  2868007 ttttgcagttttagtcatatttccctatctctaactccaaaaacgcacataaatgacagttttagtccaac 2868077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 23340185 - 23340359
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| || | | ||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||  | ||||||| ||             
T  23340185 cttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatat-----attt 23340279  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| | |||||||||||| |||||||| || |||||||||||||||| ||||||| ||||||    
T  23340280 tttgcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttagttcaaccacatatgct 23340359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 278
Target Start/End: Original strand, 37505069 - 37505232
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||  ||||| ||||||||| ||||||||||||| ||||||| |||            
T  37505069 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatg----tttt 37505164  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtcca 278  Q
       |||||||||||||||| | ||||||| |||||| | ||| | ||| |||||||||||||||||||    
T  37505165 tttgcagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagttttagtcca 37505232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 50305328 - 50305152
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||| ||   ||||| ||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| ||              
T  50305328 ttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat--attttttt 50305231  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||| ||||| ||||||| |||||| | |||| ||||||||||||||||||| |||||| || ||||||    
T  50305230 ttgcagttttagtcatatctccctattttcaactccataaacacacataaatgacagttttaatccaactacttatgct 50305152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 290
Target Start/End: Original strand, 50926227 - 50926408
Alignment:
Q  106 ataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnn 205  Q
    ||||||||||||||| |||||||||||  |||||||||| |||| ||||||  || || |||||| ||||| |||||||||||||||||||||           
T  50926227 ataaacttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaacta---tcat 50926323  T
Q  206 nnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
            ||||||||||||||  | |||||||| |||||| |||||| ||||||||||  ||||||||||||||||||||||||    
T  50926324 ttttttttgcagttttagtccttacctcctattttcaactccagaaacacacataaatggtagttttagtccaaccacctatgct 50926408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 17641467 - 17641539
Alignment:
Q  216 agttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  17641467 agttttagttctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatg 17641539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 44954229 - 44954402
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| |||| |||| |  ||||||||||||||| |||||||||| || || ||||||||| ||||||||||||  |||| || |||             
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatgtttttt--- 44954325  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||| |||||  || |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  44954326 --gcagttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 44954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 6224800 - 6224875
Alignment:
Q  215 cagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    ||||||||||| |||||  ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  6224800 cagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaaccacctatgct 6224875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 39485068 - 39485154
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||| |||||||| | |||| |||||||||| || |||||| ||||| |||||||||||||||||||||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaacta 39485154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 16299128 - 16299055
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
    |||||||||||||||||| | |||||||||||| ||||||||||| |||||||| ||||||| |||||||||||    
T  16299128 gcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaaccacctat 16299055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 50926785 - 50926611
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||| ||| |||||||||| |||| ||||||||||   ||||||| ||||| ||||||| |||||||||||||                
T  50926785 cttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaacta-----tcatttt 50926691  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||||  |  ||||||| |||||| | |||| ||||||||||  ||||||||||||||||||||||||    
T  50926690 tttgcagttttagtccttaccccctattttcaactccataaacacacataaatggtagttttagtccaaccacctatgct 50926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 29021409 - 29021234
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||| ||||||||||||||  |||||||||| |||| ||||||| || |  |||||| ||||| |||||||||||||||||| ||                
T  29021409 cttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattat---cacggttt 29021313  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| || |  ||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  29021312 tttgcagttttagtcttaccc-cctattttcaactccagaaacgcacataaatgacagtttttgtccaaccacctatgct 29021234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 17088683 - 17088596
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||||||  ||||||| || |||| |||||||||| |  |||||| ||||||||||||| |||||||||||||    
T  17088683 cttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaacta 17088596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 290
Target Start/End: Complemental strand, 44582604 - 44582427
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||||||||||||| ||   ||||||| ||||||| |||||||||| ||||  ||| ||||| ||||||||||||  ||||||| |||           
T  44582604 acttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactatatgttttttt 44582505  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaa-cgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||| | ||| ||||||| || ||| | ||| |||||| |||||||||||||||||||||||||||||||    
T  44582504 ----gcagttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagtccaaccacctatgct 44582427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 45048158 - 45048244
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||| | ||||||||||||| | |||||||||  || |||||||||||  ||||||||||||| |||||||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaacta 45048244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 23526650 - 23526747
Alignment:
Q  101 aaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||| || |||| |||||||||||||||||  |||||||||| |||| |||||||||| |  |||||||||||| ||||||||| |||||| ||||    
T  23526650 aaaaaaaaagcttagttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagacta 23526747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 25274760 - 25274845
Alignment:
Q  113 taattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||| ||||||||||||||| |||||||||| |||| |||||||||| |  |||||| ||||| ||||||| ||| |||||||||    
T  25274760 taattgcacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaacta 25274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 30787342 - 30787255
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||| ||||   |||| || ||||||| |||||||||| ||||| ||| ||||| ||||||||||||| |||||||    
T  30787342 cttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaacta 30787255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 37421488 - 37421401
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatc-tcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||| ||| |   ||||||||||||||| |||||||||| |||| | ||||||||| ||||||||||||| |||||||    
T  37421488 ttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaacta 37421401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 44802715 - 44802628
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||||| | |||||||||| |||| |||| ||||| |  |||||| |||   |||||||||||||||||||||    
T  44802715 cttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaacta 44802628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 9833696 - 9833522
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaa-atgnnnnnnn 209  Q
    |||||||  ||||||| |||| ||| ||||||||||||| |||||| ||| |  |||||| ||||| |||||||||||||||||| ||  |||           
T  9833696 cttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgtttttt- 9833598  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||||||| |  ||||||| |||||| ||||||||||| |||| ||| ||||||||| ||||||||||||    
T  9833597 ----gcagttttagtcctaccc-cctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 29439465 - 29439379
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||| ||||||||||||    ||||||| ||||||| ||||||| || ||||| ||||||||| ||||||||||||| |||||||    
T  29439465 ttaattgcacttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaacta 29439379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 45048678 - 45048600
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    |||||||||||||||||||||| ||||||||||  ||| |||||||||| || ||||||  |||| ||||||| |||||    
T  45048678 ttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtcc 45048600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 44291854 - 44291777
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtc 189  Q
    |||||| || |||| ||||| |||||||||||| |||| |||||||||| | ||||||||||||| || |||||||||    
T  44291854 ttaattgcatttttagtccttgtattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtc 44291777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 30787214 - 30787142
Alignment:
Q  218 ttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||| | ||||||| |||||| | ||| ||| | ||||||||||||||||||||| |||||||||    
T  30787214 ttttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaactacctatgct 30787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 44291302 - 44291390
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||| ||||||||||||||  |||||||||| |||| |||||||||  |  |||||| ||||  ||||||||||||| |||||||    
T  44291302 acttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaacta 44291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 48174263 - 48174179
Alignment:
Q  114 aattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||| ||| |  ||||||||||| || |||| ||||| |||  | ||||||||||||||||||||| |||||||||||||    
T  48174263 aattacactattgattttcgtattttgatcagctcacgaaaacggttctgtctcttttaaatcaaacaaaaccgtccctaaacta 48174179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 50304882 - 50304958
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||| ||||| |||||||| ||||| | |||| |||| ||||| || ||||| ||||||||||||||||    
T  50304882 gcagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccacctatgct 50304958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 17088148 - 17088227
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    |||||||||||| |||||| ||| |||||||||| |||| ||||||||| ||  |||||| ||||| ||||||| |||||    
T  17088148 cttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgtcc 17088227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 29020882 - 29020966
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    ||||||| ||| | ||||| ||||||||||| || ||||  ||||||||| | ||||||||||||| ||||||||| ||| ||||    
T  29020882 cttaattgcacatatggtcttcgtattttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaa 29020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 47826955 - 47827015
Alignment:
Q  101 aaaaaataa-acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||| ||||||||||||||||||||||||| |||||  | ||||| ||||||||||    
T  47826955 aaaaaataatacttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtc 47827015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 9019506 - 9019468
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactca 149  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  9019506 cttaattacacttttggtcctcgtgttttgacctactca 9019468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 21856043 - 21856093
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||||| |||||| | ||||| |||| |||||    
T  21856043 acttaattacacttttggtcctcgtgttttgatctactcacgaaactggtc 21856093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 33144463 - 33144413
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  33144463 acttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 33144413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 50970280 - 50970345
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatca 177  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| ||||| |  |||||||||||||    
T  50970280 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct-gctcttttaaatca 50970345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 5539818 - 5539867
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  5539818 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 5539867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 5540361 - 5540312
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  5540361 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 5540312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 8678543 - 8678592
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  8678543 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 8678592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 29307485 - 29307436
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||| |||||||||||||||| |||||||| ||||| |||| |||||    
T  29307485 cttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtc 29307436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 29870162 - 29870113
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  29870162 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggtc 29870113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 39154563 - 39154514
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  39154563 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 39154514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 52268292 - 52268321
Alignment:
Q  111 cttaattacacttttggtcctcgtattttg 140  Q
    ||||||||||||||||||||||||||||||    
T  52268292 cttaattacacttttggtcctcgtattttg 52268321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 17088585 - 17088526
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttag 274  Q
    ||||||||||| ||| || ||||||| ||| |||||||||||| | |||||||||||||||    
T  17088585 gcagttttagttctacct-cctattttcaaatctagaaacgcagagaaatgacagttttag 17088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 142
Target Start/End: Complemental strand, 52269292 - 52269260
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgac 142  Q
    ||||||||||||||||||||||||| |||||||    
T  52269292 acttaattacacttttggtcctcgtgttttgac 52269260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 3e-48; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 330380 - 330206
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||||| || || ||||||||||||||||||||||||||||||| |||            
T  330380 cttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatg-----ttt 330286  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  330285 tttgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaaccacctatgct 330206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 51827959 - 51828133
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  51827959 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-- 51828056  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||| |||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51828057 ---gcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 51828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 25534892 - 25535067
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccc-taaactaaatgnnnnnnn 209  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||||||| || |||||||||||| |||||||||||||| |||| || |||           
T  25534892 cttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattatatgtttttt- 25534990  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25534991 ----gcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 25535067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 112 - 287
Target Start/End: Original strand, 40838655 - 40838825
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||| |||||| ||||||||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||| |||             
T  40838655 ttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatg-----tttt 40838749  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
      |||||||||||| ||||  |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  40838750 ttgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctat 40838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 40839195 - 40839022
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||||||||||  |||||||| |||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |||             
T  40839195 ttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg-----tttt 40839101  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||| || ||||||    
T  40839100 ttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgct 40839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 51473399 - 51473225
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||| ||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||             
T  51473399 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-- 51473302  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  51473301 --gcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 51473225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 43678297 - 43678471
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  43678297 cttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 43678394  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  43678395 ---gcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaaccacctatgct 43678471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 47431698 - 47431873
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| || |||||||||||| ||||||||||||  ||||||| |||            
T  47431698 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgttttttt- 47431796  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  47431797 ---gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 47431873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 49952090 - 49951916
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| |||||||||| | ||||||||||||||| |||| |||||||| |||||||||||| ||||||||||||  ||||||| |||            
T  49952090 cttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatgtttttt-- 49951993  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49951992 ---gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49951916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 51828541 - 51828716
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||| | | |||| |||||||| |||||||||||| ||||||||||||| ||||||| |||            
T  51828541 cttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgttttttt- 51828639  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  51828640 ---gcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 51828716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 51829084 - 51828910
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||| |  |||||||| ||||||| |||||||||| ||||| |||||| |||||||||||||||| ||||||| |||            
T  51829084 cttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgtttttt-- 51828987  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  51828986 ---gcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttagtccaaccacctatgct 51828910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 113 - 292
Target Start/End: Original strand, 55389609 - 55389783
Alignment:
Q  113 taattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnn 212  Q
    ||||||||||||||||||||  |||| |||||||||| |||||||||| || || ||||||||| ||||||||||||| ||||||| |||              
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatgtttttt---- 55389704  T
Q  213 ngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgctac 292  Q
     |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  55389705 -gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgctac 55389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 103 - 290
Target Start/End: Complemental strand, 32730941 - 32730759
Alignment:
Q  103 aaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatg 202  Q
    |||||| |||||||||||||||||||| |   ||||| |||||||||||||||||||| ||||| ||||||||  ||||||||||||| ||||||| |||    
T  32730941 aaaatagacttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatg 32730842  T
Q  203 nnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
               ||||||||| |||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  32730841 tttttt-----gcagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 32730759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 40275095 - 40275271
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||| || |||||||||||| |||||||| |||||||||||  |||            
T  40275095 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatg---ttttt 40275191  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| | |||||| ||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  40275192 tttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 40275271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 40275637 - 40275464
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||  ||||||||||||||| |||| ||||| || |||||||||||| |||||||||||| |||||||| |||            
T  40275637 cttaattacacttttggtcctcacattttgaccaactcacgaaa-tggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttt-- 40275541  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  40275540 ---gcagttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 40275464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 46013424 - 46013598
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||| | ||||||||||||||| |||| ||||| || |||||||||||| |||||||||||||||||| || |||            
T  46013424 cttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttttt-- 46013521  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  46013522 ---gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacggttttagtccaaccacctatgct 46013598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 46013967 - 46013792
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||| ||   ||||||||||||||   ||||||||  ||||| ||||||||| ||||||||||||| ||||||| |||            
T  46013967 cttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt- 46013869  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46013868 ---gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 46013792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 49720373 - 49720547
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||| | ||||||||||||||| |||| ||||| || |||||||||||| |||||||||||||||||| || | |            
T  49720373 cttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacgtttttt-- 49720470  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49720471 ---gcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49720547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 52375875 - 52375701
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||| || |||||||||||  ||||||||||||| ||||||| |||            
T  52375875 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatg-----ttt 52375781  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| |||   |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  52375780 tttgcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacttatgct 52375701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 55390141 - 55389967
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||| ||||| ||||| ||| |||||||||| || || |||||||||||||||||||||| |||||||| |||            
T  55390141 cttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatg-----ttt 55390047  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       | ||||||||||||| || |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  55390046 tttgtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 55389967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 32730392 - 32730565
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||||||||| | ||||||||||||||  |||| ||||| || |||||||||||  ||||||||||||||||||||| |||             
T  32730392 ttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatgtttttt--- 32730488  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  32730489 --gcagttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagttttagttcaatcacctatgct 32730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 44677015 - 44676842
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||             
T  44677015 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-----tttt 44676921  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||| ||||||||||||||  |||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  44676920 ttgcaattttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgct 44676842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 49951549 - 49951722
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||             
T  49951549 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-----tttt 49951643  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||| |||||||||||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||| ||||||    
T  49951644 ttgcaattttagtcctatctccctatttccaactccataaacgcacataaataacagttttagtccaaccacatatgct 49951722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 288
Target Start/End: Original strand, 2044273 - 2044445
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||||||| || |||||||||||| ||||||||||||| |||| || |||            
T  2044273 cttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgtttttt-- 2044370  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       | |||||||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2044371 ---ggagttttagtcatatctccctatttccaactcaagaaacgcacataaataacagttttagtccaaccacctatg 2044445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 288
Target Start/End: Complemental strand, 52237361 - 52237189
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||| || |||            
T  52237361 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-----ttt 52237267  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||||||||||||||||| |||||||| |||||  |||||||||| ||||||||||||||||| |||||| ||||    
T  52237266 tttgcagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttagtcaaaccacatatg 52237189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 287
Target Start/End: Complemental strand, 43678828 - 43678657
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||| ||||||| |||  |||||  | |||||||||||| ||||||||||||| ||||||| |||            
T  43678828 cttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt-- 43678731  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
       ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43678730 ---gcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagttttagttcaaccacctat 43678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 52236817 - 52236992
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||||||||||| ||||||| ||||||| ||| ||| |||||||||| || |||||||||||| ||||||||||||||||||||| |||           
T  52236817 acttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-----tt 52236911  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||| ||||  ||||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  52236912 ttttgcagttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 52236992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 2051297 - 2051475
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||| | ||||||| |||            
T  2051297 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatgtttttttt 2051396  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||| |||||| | |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  2051397 tt-gcagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 2051475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 282
Target Start/End: Original strand, 38535311 - 38535477
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  38535311 cttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-----ttt 38535405  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaacca 282  Q
       ||||||| |||||||||| |||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  38535406 tttgcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagttcaacca 38535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 41998231 - 41998406
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||  |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  41998231 cttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt- 41998329  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| |||||||||||||| | ||||| ||| |||||||||||||||||||||||||||||||    
T  41998330 ---gcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttagtccaaccacctatgct 41998406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 111 - 288
Target Start/End: Original strand, 51472857 - 51473029
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| |||||||||||| | ||||||||||||||| |||| |  || || ||||||||||||||||||||| ||||||||| || |||            
T  51472857 cttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatgtttttt-- 51472954  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  51472955 ---gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatg 51473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 103 - 275
Target Start/End: Original strand, 22370590 - 22370758
Alignment:
Q  103 aaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatg 202  Q
    |||||| | |||||||||||||||||||||| ||||||||||||||| |||||||||| || || ||||||| ||||||||||||||||||||||| |||    
T  22370590 aaaatacatttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatg 22370689  T
Q  203 nnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagt 275  Q
               |||||||||||||||||| | ||| |||||||| ||||||||||| |||| |||||||||||    
T  22370690 ----tttttttgcagttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttagt 22370758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 50662956 - 50662782
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| ||||||||||||   |||||||| |||||| |||||| ||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  50662956 cttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 50662859  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||||| || ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  50662858 ---gcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 50662782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 51828502 - 51828327
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   | ||||||||||||| |||||||||| ||| | ||||||||| |||||||| |||| ||||||| |||            
T  51828502 cttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgttttttt- 51828404  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||    
T  51828403 ---gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaactacctatgct 51828327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 111 - 288
Target Start/End: Complemental strand, 38535839 - 38535667
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| |||||||||||  | ||||||||||||| | |||| | |||  |||||||||||||| || |||||||||||||||||| |||            
T  38535839 cttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgtttttt-- 38535742  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  38535741 ---gcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagttttagtccaaccacatatg 38535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 14654733 - 14654561
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| |||   || |||||||||||| ||||||||||||| |||||||  |             
T  14654733 cttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactatgt-------tt 14654641  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||| |||||||    
T  14654640 tttgcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttagttcaaccatctatgct 14654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 290
Target Start/End: Complemental strand, 34105190 - 34105018
Alignment:
Q  115 attacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnnng 214  Q
    ||||||||||||||||| | ||||||||||||| | |||  ||||| |  |||||||||||| ||||||||||||||||||||| |||           |    
T  34105190 attacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttt---g 34105094  T
Q  215 cagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||| |||| | |||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  34105093 cagttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 34105018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 278
Target Start/End: Original strand, 44676474 - 44676636
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | |||||||| |||||| |||| || || || |||||||||||| ||||||| ||||||||||||| |||            
T  44676474 cttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatgtttttt-- 44676571  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtcca 278  Q
       |||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||    
T  44676572 ---gcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagttttagtcca 44676636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 52375329 - 52375503
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||  ||||| ||||| ||| |||||||||| || |||||||||||  ||||||||||||||||||||| |||            
T  52375329 cttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatg-----ttt 52375423  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||| |||||| |||||||| ||||| ||||||||| | ||||||||||||||||| |||||| ||||||    
T  52375424 tttgcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagttttagtctaaccacatatgct 52375503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 49720905 - 49720818
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| |||||||    
T  49720905 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaacta 49720818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 30513723 - 30513898
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||||| |||||||||| | |||||||| |||||| |||||||||| ||||| ||||||||| || |||||||||  ||||||| |||           
T  30513723 acttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgtct-taaactatatgtttttct 30513821  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||| ||||| | |||||| ||||  ||||||||||| ||||||||||||||||||| |||||||||||    
T  30513822 ----gcagttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagttttagtccagccacctatgct 30513898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 41998772 - 41998600
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||| | |||| ||||| || |||||||||||| ||||||||||||||| ||||| |||            
T  41998772 cttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactatatg----tttt 41998678  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||||| || ||||||| |||||||||||||| |||| ||||| || |||||| ||||||||||||||    
T  41998677 tttgcagttttagtccta-ctccctattttcaactctagaaacgtacat-aatgatagatttagttcaaccacctatgct 41998600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 111 - 281
Target Start/End: Complemental strand, 16701336 - 16701168
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| ||||||||||   ||||||||||||||| |||||||||| ||||| |||||| || ||||||||||||| ||||||| |||            
T  16701336 cttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatg--tttttt 16701239  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaacc 281  Q
       |||||||||||| ||||| |||||||||||||| | |||||||   |||| |||||||||||||||||    
T  16701238 tttgcagttttagtcatatctccctatttccaactccataaacgcatcgaaattacagttttagtccaacc 16701168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 36701641 - 36701553
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||| | ||||||| ||||| ||||||||| |||||||||||    
T  36701641 acttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaacta 36701553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 34104664 - 34104813
Alignment:
Q  135 attttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnnngcagttttagtcctatcttcc 234  Q
    ||||||||||||||| |||||||||  ||||| ||||||||  ||||||||||||  ||||||| |||           |||||||||||| ||||| ||    
T  34104664 attttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatgtttttt-----gcagttttagtcatatct-cc 34104757  T
Q  235 tatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  34104758 tatttccagctccagaaacgcacaaaaatgacatttttagtccaaccacctatgct 34104813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 284
Target Start/End: Complemental strand, 43222944 - 43222765
Alignment:
Q  101 aaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaa 200  Q
    |||||| || |||||| |||||||||||||||| |||||||| | | || |||||||||| |  |||||||||||| ||||||||||||||||||||  |    
T  43222944 aaaaaaaaagcttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaacttta 43222845  T
Q  201 tgnnnnnnnnnnngcagttttagtcctatcttccta-tttccaactctagaaacgcacataaatgacagttttagtccaaccacc 284  Q
    ||           ||||||||||||| | |  |||| ||| |||||| ||||||||||| |||||||||||||||||||||||||    
T  43222844 tg----tttttttgcagttttagtccca-ccccctatttttcaactccagaaacgcacaaaaatgacagttttagtccaaccacc 43222765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 37075688 - 37075864
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||  || ||||||||||||||| |||||||||| |  |||||| ||||||||||||  ||||||||||||| |||            
T  37075688 cttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatg--tttttt 37075785  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||||| | || ||||| |||||| ||||||||| | ||||||| ||||||| || ||| ||||||||    
T  37075786 tttgcagttttagtccta-cctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 55192120 - 55192293
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||| |||| || |||||||||| |||| |||||||||||   |||||| ||||||||||||| ||||| ||||||| |||            
T  55192120 cttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactatatg-----ttt 55192214  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       | ||||||||||||| | |||||||| |||||| ||||||||| | ||||||||||||||| || ||| ||||||||    
T  55192215 tttgtagttttagtccta-cctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 329850 - 330012
Alignment:
Q  113 taattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnn 212  Q
    |||||||||||||||| ||   ||||||||||||||| |||||||||| || || ||||||||| ||||||||||||| ||||||| |||              
T  329850 taattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatg-----ttttt 329944  T
Q  213 ngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
     |||||||||||||||||| ||| ||||||||||          ||||||||||||||||||||||||||| ||||||    
T  329945 tgcagttttagtcctatctccctgtttccaactc----------cataaatgacagttttagtccaaccacttatgct 330012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 27199705 - 27199878
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| |||||||||||| |||||||||| |||| |||||||||| |  |||||| ||||| ||||||| |||| |||||||| |||             
T  27199705 ttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatg----ttttt 27199800  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||||||||||| ||| | |||||||| |||||||||||||||| ||||||  ||||||||| || ||| ||||||||    
T  27199801 ttgcagttttagtgcta-catcctattttcaactctagaaacgcagataaatatcagttttagacctaccccctatgct 27199878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 195
Target Start/End: Original strand, 16689361 - 16689444
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    ||||||||| |||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||| ||||    
T  16689361 ttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaa 16689444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 33412698 - 33412611
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||||||| ||||||| || |||| |||||||||  | |||||||  |||| |||||||||||||||||||||    
T  33412698 cttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaacta 33412611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 36701108 - 36701195
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||| || |  |||||| ||||| ||||||||||||| |||||||    
T  36701108 cttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaacta 36701195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 43222392 - 43222566
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||  |||||||| ||  ||||||||||||||| |||||| ||  | ||||||||||||| ||||||||||||||||||||| |||            
T  43222392 cttaattacgtttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatg-----ttt 43222486  T
Q  211 nnngcagttttagtcctatcttccta-tttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||| ||||| ||||| |  |||| ||| |||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  43222487 tttgcatttttaatccta-ccccctatttttcaactccagaaacgtacaaaaatgacagttttagtccaaccacctatgct 43222566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 49407798 - 49407884
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaact 197  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||||| |  |||||| ||||  ||||||| ||||||||||||    
T  49407798 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaact 49407884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 14654201 - 14654288
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||| | ||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||  |||||||    
T  14654201 cttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaacta 14654288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 39010077 - 39010250
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| |||||||||| | |||||||||||||||  ||| || || || |||||||||||| |||||||| || | ||||||  |||            
T  39010077 cttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatgtttttt-- 39010174  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||  |||| ||||||| |||||| | ||| |||||||||||| ||||||||||||||||| ||||||    
T  39010175 ---gcagttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaaccacatatgct 39010250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 50901071 - 50900984
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||||||| |||||||||| ||||  ||||||| | |  |||||  ||||| ||||||| |||||||||||||    
T  50901071 cttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaacta 50900984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 49408325 - 49408252
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaa 184  Q
    |||||||||||||||||| |||| |||||||||| |||| |||||||||  | ||||||| ||||| |||||||    
T  49408325 cttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaa 49408252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 14654309 - 14654361
Alignment:
Q  232 tcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacc 284  Q
    |||||||||||||||   ||||||||| |||||||||||||||||||||||||    
T  14654309 tcctatttccaactccgtaaacgcacagaaatgacagttttagtccaaccacc 14654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 37076227 - 37076139
Alignment:
Q  102 aaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    ||||| || |||||||||| |||||||||||| ||||||| || |||| ||||||||||    |||||| ||||| |||||||||||||    
T  37076227 aaaaaaaagcttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtcc 37076139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 23644464 - 23644513
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||||||||| || ||||| |||| |||||    
T  23644464 cttaattacacttttggtcctcgtattttggcctactcacgaaattggtc 23644513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 30104484 - 30104533
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| |||||    
T  30104484 cttaattacacttttggtcctcgtgttttgacctactcacgaaattggtc 30104533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 5136983 - 5137031
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtc 5137031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 25612519 - 25612471
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||| |||||||| ||||| |||| |||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtc 25612471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 27200235 - 27200187
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggt 159  Q
    ||||||||||||||||||||| | |||||||||| |||| |||||||||    
T  27200235 cttaattacacttttggtccttgcattttgaccagctcacgaaaatggt 27200187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 30098306 - 30098255
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtctt 162  Q
    |||||||||||||||||||||||| |||||||  ||||| |||| |||||||    
T  30098306 cttaattacacttttggtcctcgtgttttgacatactcacgaaactggtctt 30098255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 39010541 - 39010486
Alignment:
Q  135 attttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    |||||||||| |||| ||||||| || ||||| ||||||||| |||||||||||||    
T  39010541 attttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtcc 39010486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 8874229 - 8874143
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||  ||| ||  ||||||||| |||| |||||||||| |   ||||||||||| ||||||| | |||||||||||    
T  8874229 ttaattacacttttcatccccgcgttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaacta 8874143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 27393663 - 27393701
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactca 149  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  27393663 cttaattacacttttggtcctcgtgttttgacctactca 27393701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 37220559 - 37220597
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactca 149  Q
    |||||||||||||||||||||||||||||| || |||||    
T  37220559 cttaattacacttttggtcctcgtattttggcctactca 37220597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 43973443 - 43973489
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatg 157  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||    
T  43973443 cttaattacacttttggtcctcgtgttttgtcctactcacgaaaatg 43973489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 4275907 - 4275858
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  4275907 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 4275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 8873694 - 8873770
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtc 189  Q
    ||||||||| |||||||||||| ||||||| ||  | | |||||||||| | ||||||||||||| ||||||| ||||    
T  8873694 ttaattaca-ttttggtcctcgcattttgatcagtttacgaaaatggtcatgtctcttttaaatcgaacaaaaccgtc 8873770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 20840562 - 20840611
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  20840562 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 20840611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 24301099 - 24301050
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  24301099 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 24301050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 25853236 - 25853285
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  25853236 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 25853285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 29801959 - 29801910
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||| ||||||||||||| || ||||| |||| |||||    
T  29801959 cttaattacacttttgatcctcgtattttggcctactcacgaaactggtc 29801910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 31779195 - 31779146
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  31779195 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 31779146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 32535506 - 32535457
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  32535506 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 32535457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 39555580 - 39555629
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  39555580 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 39555629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 39556120 - 39556071
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  39556120 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 39556071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 5137524 - 5137476
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggt 159  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| ||||    
T  5137524 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggt 5137476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 25420685 - 25420641
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaa 154  Q
    ||||||||||||||||| || ||||||||||||| ||||| ||||    
T  25420685 acttaattacacttttgatcatcgtattttgacctactcacgaaa 25420641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 43973983 - 43973935
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggt 159  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| ||||    
T  43973983 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 43973935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 50900633 - 50900692
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttag 274  Q
    ||||||||||||||| |||| ||||| |||||||||||||  | | |||||||||||||||    
T  50900633 gcagttttagtcctaccttc-tattttcaactctagaaacatagagaaatgacagttttag 50900692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 111 - 289
Target Start/End: Complemental strand, 56077868 - 56077695
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| ||||||||||   ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||| |||            
T  56077868 cttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 56077771  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgc 289  Q
       |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  56077770 ---gcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccacctatgc 56077695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 110 - 290
Target Start/End: Complemental strand, 34789928 - 34789752
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| |||||||| |||||||||||| |||           
T  34789928 acttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgttttttt 34789829  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  34789828 ----gcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 46737199 - 46737024
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  46737199 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-- 46737102  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgcta 291  Q
       |||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  46737101 ---gcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgcta 46737024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 34789384 - 34789558
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  34789384 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 34789481  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  34789482 ---gcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 34789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 34807118 - 34807293
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||| ||||||| |||| ||||| || |||||||||||| |||||||||||||||||| || |||            
T  34807118 cttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgttttttt- 34807216  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34807217 ---gcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 34807293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 14439831 - 14440004
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| |||||||||| | ||||||||||||||| |||| ||||| || || |||||||| |||||||||||||||||||||| |||             
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgtttttt--- 14439927  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  14439928 --gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 45839092 - 45838917
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||||||  |||||||||||||||| |||| ||||| ||||| ||||||||| ||||||||||||| ||||||| |||             
T  45839092 ttaattacacttttggtcctactattttgaccaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 45838994  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  45838993 --gcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 45838917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 55677502 - 55677327
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| ||||| || |||||||||||| |||||||||||| |||||||| |||            
T  55677502 cttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttta 55677403  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        || |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||    
T  55677402 ----caattttagtcctatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgct 55677327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 286
Target Start/End: Original strand, 21034237 - 21034408
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  21034237 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttta 21034336  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccaccta 286  Q
        ||||||||||| ||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  21034337 ----cagttttagtcatatctccctatttccaactccataaacgcacataaatgacagttttagtccaaccaccta 21034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 21034781 - 21034606
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| |||||||||| | ||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||| ||||| ||             
T  21034781 cttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatat----ttttt 21034686  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||| |||||| |||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  21034685 tttgcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttagtccaaccacctatgct 21034606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 110 - 290
Target Start/End: Complemental strand, 24852011 - 24851835
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||| |||||||||||| | ||||||||||||||| |||| || || || |||||||||||| ||||||||||||||||||||| |||           
T  24852011 acttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt 24851912  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||||| ||||||||||||||    
T  24851911 ----gcagttttagtcctatctttctatttccaactccagaaacgcacagaaatgaaagttttagtacaaccacctatgct 24851835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 110 - 290
Target Start/End: Complemental strand, 54441114 - 54440939
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||||||||||||||||   ||||||| || |||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||           
T  54441114 acttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt- 54441016  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||||||||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  54441015 ----gcagttttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttagtccaaccacctatgct 54440939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 14440372 - 14440198
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| ||||||||||||   ||||||||||||| | |||||||||| ||||| ||||||||| ||||||||| ||| ||||||| |||            
T  14440372 cttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgtttttt-- 14440275  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14440274 ---gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 28465625 - 28465451
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  28465625 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-----ttt 28465531  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||| |||||||||||||| |||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||    
T  28465530 tttgcaattttagtcctatctccctatttccaactccataaacgcacataaatagcagttttagtccaaccacctatgct 28465451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 54440572 - 54440745
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||  |||           
T  54440572 acttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact--atg-----tt 54440664  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||||||||| ||||||| |||||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  54440665 ttttgcagttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccacctatgct 54440745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 287
Target Start/End: Original strand, 33689831 - 33690001
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | |||||||||||||||  ||| ||||| || |||||||||||| ||||||||||||| ||||||| |||            
T  33689831 cttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttt--- 33689927  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
       |||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  33689928 ---gcagttttagtcatatctccctatttacaactccagaaacgcacataaatgacagtgttagtccaaccacctat 33690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 99 - 277
Target Start/End: Original strand, 19528859 - 19529033
Alignment:
Q  99 ataaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||  ||||||||||||||||||||| | ||||||||||| ||| |||| ||||| || |||||||||||| || ||||||||||||||||||    
T  19528859 ataaaaaataggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaacta 19528958  T
Q  199 aatgnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtcc 277  Q
     |||           |||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||||||||||    
T  19528959 tatg----tttttttgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 41114160 - 41114335
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||| ||||||||||||||   ||||||||||||||| ||||| |||| ||||| ||||||||| ||||||| ||||| ||||||| |||             
T  41114160 ttaatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatgtttttttt- 41114258  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  41114259 --gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgct 41114335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 12593567 - 12593393
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||  ||||||| ||             
T  12593567 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatat-----attt 12593473  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| ||||||| |||||| |||||||||||  ||||||||||||||||||||||| ||||||    
T  12593472 tttgcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttagtccaaccacatatgct 12593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 26974285 - 26974460
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||| || |||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  26974285 cttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttta 26974384  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||    
T  26974385 ----cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccaactatgct 26974460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 28465082 - 28465257
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||||||||||| |||||   ||||||||||||| | |||| || || || |||||||||||| ||||||||||||| ||||||| |||           
T  28465082 acttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttt- 28465180  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28465181 ----gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 28465257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 45838549 - 45838723
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||| |||||||||||||||| ||||||||||||||||| | || ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  45838549 cttatttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-----ttt 45838643  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| ||||||||| |||  | ||||||||| |||||| |||||| |||||||||||||||||    
T  45838644 tttgcagttttagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagtttttgtccaaccacctatgct 45838723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 6616675 - 6616849
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||| ||   ||||||| ||||||| |||||||||||||| | ||||||||| ||||||||||||| ||||||| |||             
T  6616675 ttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-- 6616772  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      || || ||||||||| ||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6616773 --gctgtgttagtcctacctctctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 6616849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 288
Target Start/End: Original strand, 36168332 - 36168506
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||| |||| | |||||||||||| || |||| |||||||| |||||||||||| ||||||||||||| |||| || |||             
T  36168332 ttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatgttttttttt 36168431  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
      |||||||||||| ||||| |||||||| ||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  36168432 --gcagttttagtcttatctccctatttctaactccagaaacgcatataaatgacagttatagtccaaccacctatg 36168506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 41608377 - 41608551
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||||||||| | ||||||| ||||||| |||| ||||| || |||||||||||| |||||||||||||  |||||| |||             
T  41608377 ttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatgttttttttt 41608474  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| | |||||||||||  | ||||||||| |||||||||||||||||||||||||||||||    
T  41608475 --gcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaaccacctatgct 41608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 288
Target Start/End: Original strand, 12593026 - 12593198
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   | ||||||||||||| |||||||||| || || ||||||||| ||||||||||||| ||||||| |||            
T  12593026 cttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatg-----ttt 12593120  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       ||| ||||| |||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  12593121 tttgcaattttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacaacctatg 12593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 288
Target Start/End: Original strand, 46736657 - 46736829
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| ||||||||| ||  |||||||||||||||| |||||||||||||| | ||||||||| |||||||| |||| ||||||| |||            
T  46736657 cttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatg-----ttt 46736751  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||| |||| |||||||| ||||||| |||||| ||||||||||| |||||||||||||||| ||||||| ||||    
T  46736752 tttgcagatttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacttatg 46736829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 24851565 - 24851639
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  24851565 gcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatg 24851639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 229702 - 229529
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta-aatgnnnnnnnn 210  Q
    |||||||||||||||||| ||| |||||||||| |||| ||||||||||||  |||||| ||||||||||||||||||| |||||||  |||            
T  229702 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatg------tt 229609  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||| ||||| || | ||||| |||||| ||||||||||| || ||||| ||||||| ||||||||||||||    
T  229608 tttgcagttttaatcctacctccttattttcaactccagaaacgcacagaagtgacaattttagtacaaccacctatgct 229529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 28166007 - 28166180
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||| | ||||||||||  |||||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||| ||||||| ||              
T  28166007 ttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat-----ttttt 28166101  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| ||||||| |||||  | ||||||||| |||||| ||||||| | ||||||||||||||    
T  28166102 ttgcagttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagttttaattcaaccacctatgct 28166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 35643667 - 35643743
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  35643667 gcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 16215038 - 16214865
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||| ||||||||||||   ||||||| ||||| | ||||||| || ||||| ||||||||  || |||||||||| ||||||| ||              
T  16215038 ttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatat-----atttt 16214944  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||||||||| | |||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  16214943 ttgcagttttaattctatcttcctattttcaactccagaaacacacataaatgatagttttagtccaaccacctatgct 16214865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 290
Target Start/End: Original strand, 35193322 - 35193483
Alignment:
Q  123 tttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnnngcagtttta 222  Q
    ||||||||||| ||||||| || |||| |||||||||| || |||||| ||||| ||||||||||||||||||||| |||           |||||||||    
T  35193322 tttggtcctcgcattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg-----ttttttgcagtttta 35193416  T
Q  223 gtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||| |||||||| |||||  ||||||||| | ||||||||||||||| || ||| ||||||||    
T  35193417 gtcctatc-tcctattttcaacttcagaaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 34807585 - 34807509
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||||||||| |||||||||||||| | ||||||| | |||||||||||||||||||||||| ||||||    
T  34807585 gcagttttagtcctatctccctatttccaactccataaacgcatagaaatgacagttttagtccaaccacatatgct 34807509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 229164 - 229337
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaa-atgnnnnnnnn 210  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||||||||  |||||| ||||  ||||||||||||| |||||||  |||            
T  229164 ttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatgttttt--- 229260  T
Q  211 nnngcagttttagtcctatcttcct-atttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||| ||| || ||| |||| |||||| | ||||||||| || ||||||||||||||||||||||||||||    
T  229261 ---gcagttttagttcta-ctcccttattttcaactccataaacgcacaaaagtgacagttttagtccaaccacctatgct 229337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 19529238 - 19529063
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| ||||   ||||||||||||| |  |||||| |  ||||||||||||||  ||||||||||||  ||||||| |||            
T  19529238 cttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactatatgttttttt- 19529140  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||| |||||| | |||||||||||  | ||||||||| ||||||||||||||||||||||| |||||||    
T  19529139 ---gcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagttttagtccaaccatctatgct 19529063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 36168774 - 36168701
Alignment:
Q  217 gttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    ||||||||||||||| ||||||| |||||| | ||| |||||||||| ||||||||||||||||||||||||||    
T  36168774 gttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaaccacctatgct 36168701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 30598059 - 30597979
Alignment:
Q  115 attacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    |||||||||||||||||||| |||||||||||||| | || ||||  | ||||||||||||| ||||||||||||||||||    
T  30598059 attacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaa 30597979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 41608959 - 41608872
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||   ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||| | |||||||    
T  41608959 cttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaacta 41608872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 280
Target Start/End: Original strand, 18965130 - 18965306
Alignment:
Q  99 ataaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||| |||| |||||||||| ||||| |||||  ||||| ||  ||||| ||||| ||||||  |||||| ||||| ||||||||||||| |||||||    
T  18965130 ataaaatataagcttaattacatttttgatcctcacattttaacttactcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaacta 18965229  T
Q  199 a-atgnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaac 280  Q
      |||           ||||||||||| ||| || | ||||| |||||||||||||||| |||||||||||||||||||||||    
T  18965230 tcatgttttt------gcagttttagttctacctccttattttcaactctagaaacgcatataaatgacagttttagtccaac 18965306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 1397596 - 1397683
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaact 197  Q
    ||||||||||||||||| |||    |||||||||||||||  ||||||||| ||||| ||||||||| ||||||||||||| ||||||    
T  1397596 acttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 23986522 - 23986609
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||| ||||||||||||||  |||||||||| |||| |||||||||| | ||||||| ||||| |||||||  ||||||||||||    
T  23986522 cttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaacta 23986609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 24851318 - 24851405
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||| ||||   ||||||||||||||| |||||||||  ||||| ||||||||  ||||||||||||| |||||||    
T  24851318 cttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaacta 24851405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 35644116 - 35644042
Alignment:
Q  101 aaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaat 175  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||| ||||  |||| || |||||||||||    
T  35644116 aaaaaaaaaacttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 44219376 - 44219441
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaat 175  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||| | ||| ||||||||    
T  44219376 acttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcctctcttttttaaat 44219441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 290
Target Start/End: Complemental strand, 33778157 - 33777992
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||||||||||| || ||   |||||||| |||||| ||||||| |  || |||||||||||||||||||||||| |||||| || |||           
T  33778157 acttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatg-----tt 33778063  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||| |||||| ||||||||||||||          ||||||||||||||||||||||||||| ||||||    
T  33778062 ttttgcagttttagttctatctccctatttccaactc----------cataaatgacagttttagtccaaccacatatgct 33777992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 51310049 - 51309962
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||| ||||||||||||||| ||||| |||| |||| |||||||||| |  |||||| ||||| |||||||  ||||||||||||    
T  51310049 cttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaacta 51309962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 6617205 - 6617119
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||| ||||| | || | |||||||| |||||| |||| ||||| || |||||||||||| || ||||||||||||||||||    
T  6617205 ttaattacatttttgctacttgcattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaacta 6617119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 18965563 - 18965513
Alignment:
Q  233 cctatttccaactctagaaacgcacataaatgacagttttagtccaaccac 283  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  18965563 cctattttcaactccataaacgcacataaatgacagttttagtccaaccac 18965513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 26974788 - 26974702
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||| |||||||||| | |||||||  || ||| |||| ||||| || |||||||||||| |||||||| ||||||||||||    
T  26974788 ttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaacta 26974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 33777635 - 33777721
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||| ||||   ||||||||||||||| ||||||| || ||| | ||| ||||| ||||||||||||| |||||||    
T  33777635 ttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaacta 33777721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 10795854 - 10795769
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaact 197  Q
    ||||||||||||||| ||| || ||||||| || |||| |||| ||||| | ||||||| ||||| |||||||||||| |||||||    
T  10795854 ttaattacacttttgatccccgcattttgaacagctcacgaaattggtcctctctctttcaaatcgaacaaaatcgtctctaaact 10795769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 24336307 - 24336223
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    |||||||||||||||| |||||| |||||||| | |||| |||||||||| |  |||||| ||||| ||||||| ||| ||||||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaa 24336223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 17504479 - 17504416
Alignment:
Q  135 attttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||| || |||| |||||||||| ||||||||||||||| ||||||| ||||| |||||||    
T  17504479 attttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaacta 17504416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 40160096 - 40160183
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||| ||||| ||| || ||||| |||| |||| |||||| ||| |  |||||||||||| ||||||| |||||||||||||    
T  40160096 cttaattacatttttgatccccgcattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaacta 40160183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 20958402 - 20958353
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||| |||||||||||||| || ||||| ||||||||||    
T  20958402 cttaattacacttttagtcctcgtattttggcctactcacgaaaatggtc 20958353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 17504074 - 17504149
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    ||||||||||||||| || ||||||| |||||| ||||||| | | ||||||||||||||| || ||| ||||||||    
T  17504074 gcagttttagtcctacct-cctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 35193846 - 35193767
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    ||||||||||||||||||||| | |||||||  | |||| |||||||||| |  |||||| ||||| ||||||| |||||    
T  35193846 cttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcc 35193767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 35643581 - 35643644
Alignment:
Q  135 attttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||| |||||||||| ||||| ||| ||||  || |||||||||| |||||||    
T  35643581 attttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaacta 35643644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 18764064 - 18764014
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  18764064 acttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 18764014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 36168875 - 36168801
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaat 185  Q
    |||||||||||| ||||||||   ||||||||||||||| ||||||| || ||| | ||||||||  ||||||||    
T  36168875 cttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaat 36168801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 40160633 - 40160555
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    ||||||||| |||||||||| | ||||||||||||||| |||||| ||| |  |||||| ||||  ||||||| |||||    
T  40160633 ttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtcc 40160555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 46193949 - 46193899
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  46193949 acttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 46193899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 11153690 - 11153641
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  11153690 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 11153641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 15523237 - 15523286
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  15523237 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 15523286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 17504378 - 17504329
Alignment:
Q  241 caactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||||||| | ||||||||||||||| || ||| ||||||||    
T  17504378 caactctagaaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 23494986 - 23494937
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  23494986 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 23494937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 24335763 - 24335836
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaa 184  Q
    |||||||||||||| | |||| | |||||||||| |||| |||||||||| |  |||||| ||||| |||||||    
T  24335763 cttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 24335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 24335864 - 24335920
Alignment:
Q  216 agttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagtttta 273  Q
    ||||||||||||| |  ||||||| |||||| | ||||||||||||||||||||||||    
T  24335864 agttttagtccta-caccctattttcaactccaaaaacgcacataaatgacagtttta 24335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 25447249 - 25447298
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  25447249 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggtc 25447298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 46193407 - 46193456
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  46193407 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 46193456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 51021350 - 51021289
Alignment:
Q  99 ataaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||  |||||||||||||||| ||||||| ||||| || ||||| |||| |||||    
T  51021350 ataaaaaataggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtc 51021289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 22170479 - 22170447
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgacc 143  Q
    |||||||||||||||||||||||| ||||||||    
T  22170479 cttaattacacttttggtcctcgtgttttgacc 22170447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 44892691 - 44892643
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggt 159  Q
    |||||||| | ||||||||||||| |||||||| ||||| |||||||||    
T  44892691 cttaattatatttttggtcctcgtgttttgacctactcacgaaaatggt 44892643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 28254970 - 28254796
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| ||             
T  28254970 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-----aatt 28254876  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  28254875 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 18428305 - 18428131
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||             
T  18428305 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-- 18428208  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  18428207 --gcagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 18428131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 114 - 290
Target Start/End: Original strand, 18049595 - 18049767
Alignment:
Q  114 aattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnnn 213  Q
    ||||||||||||||||||   ||||||||||||||| |||||||||  ||||| ||||||||| ||||||||||||| ||||||| |||               
T  18049595 aattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt---- 18049690  T
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  18049691 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccacctatgct 18049767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 35427356 - 35427182
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||  || |||||||||| | |||||||||||||||||| || ||             
T  35427356 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatat-----attt 35427262  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||| |||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  35427261 tttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 28254426 - 28254602
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||||||||||||||||   ||||||| ||||||| |||||||||| ||||| ||||||||  ||||||||||||| ||||||| |||           
T  28254426 acttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgttttttt 28254525  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||||||||| |||||||||||||| ||||||||| | |||||||| ||||||||||||||||||||||    
T  28254526 ----gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaaccacctatgct 28254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 9796728 - 9796902
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | |||||||||||||||  ||| ||||| || |||||||||||| ||||||||| ||| ||||||| |||            
T  9796728 cttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatgtttttt-- 9796825  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  9796826 ---gcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 9796902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 34799081 - 34799256
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||| |   ||||||||||||||| |||||||||| ||| | ||||||||| |||||| |||||| ||||||| |||            
T  34799081 cttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgttttttt- 34799179  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  34799180 ---gcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 34799256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 34799627 - 34799453
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||| | | |||| ||||| || |||||||||||| |||||||| |||||||||||| |||            
T  34799627 cttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttt-- 34799530  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||    
T  34799529 ---gcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagttttagttcaaccacctatgct 34799453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 41260805 - 41260631
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| |||||||||| | | ||||||| ||||||| |||| || || || |||||||||||| ||||||||||||||||||||| |||            
T  41260805 cttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-- 41260708  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  41260707 ---gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacttatgct 41260631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 9797270 - 9797096
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||||||   ||||||||||||||| |||||||||  ||||| |||||||||||| |||||||||| ||||||| |||             
T  9797270 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgttttttt-- 9797173  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||||||||||| |||||| |||||||||||||| | ||||||||| ||||||||||||||||| |||||||||||||    
T  9797172 --gcagttttagttctatctacctatttccaactccataaacgcacagaaatgacagttttagtctaaccacctatgct 9797096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 111 - 285
Target Start/End: Complemental strand, 15256375 - 15256203
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  15256375 cttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--tttttt 15256278  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacct 285  Q
       |||||| ||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  15256277 tttgcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacct 15256203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 42035774 - 42035948
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||  || |||||||||||| ||||||||||||| ||||||| ||             
T  42035774 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatat-----atat 42035868  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||| |||||||||||||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||| ||||||    
T  42035869 tttgcaattttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttagtccaaccacatatgct 42035948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 286
Target Start/End: Original strand, 599534 - 599704
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| |||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||| |||||||| || |||            
T  599534 cttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatgtttttt-- 599631  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccaccta 286  Q
       |||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  599632 ---gcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttagtccagccaccta 599704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 16578640 - 16578466
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   |||||||| |||||| |||||||||  ||||| ||| ||||| ||||||||| ||  ||||||| |||            
T  16578640 cttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatgtttttt-- 16578543  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  16578542 ---gcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaaccacctatgct 16578466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 289
Target Start/End: Complemental strand, 6115655 - 6115481
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  6115655 cttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg----tttt 6115560  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgc 289  Q
       | ||||||||| |||||| | ||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  6115559 tttgtagttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagttttagtccaaccacttatgc 6115481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 18050134 - 18049961
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| |||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |||             
T  18050134 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-----tttt 18050040  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      || |||||| |||||||| ||||||| |||||| ||||||||||| |||| ||||||||| ||||||||||||||||    
T  18050039 ttgctgttttaatcctatctccctattttcaactccagaaacgcacagaaataacagttttactccaaccacctatgct 18049961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 7911160 - 7910986
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||  |||||| ||||||||||||||| |||||||||  || |||||||||||| ||||||||||||||||||||| ||             
T  7911160 cttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatat-----attt 7911066  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||   |||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  7911065 tttgcagttttagtcatatccctctattttcaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 7910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 600042 - 599867
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||| | |||||||||| ||||| ||||||||  ||||||||||||| ||||||| |||            
T  600042 cttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatg-----ttt 599948  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgcta 291  Q
       |||||||||||| |||||  |||||||||| || ||||||||| | |||||||||||||||||||||||| |||||||    
T  599947 tttgcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaaccacttatgcta 599867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 110 - 290
Target Start/End: Complemental strand, 5731357 - 5731182
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||| |||||| ||| | | ||||||||||||||| |||| ||||  || || || |||||| ||||||||||||| ||||||| |||           
T  5731357 acttaattatactttttgtcattgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgtttttt- 5731259  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||| |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5731258 ----gcagttttagttctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5731182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 35693870 - 35694046
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||| | ||||||||||| | | ||||||| |  || |||||||||||| || |||||||||| ||||||| ||             
T  35693870 cttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatatttttt 35693969  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  35693970 t---cagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctttgct 35694046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 111 - 287
Target Start/End: Complemental strand, 42036316 - 42036144
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| ||||||  || ||| ||||||||||||| | ||||||| ||||| |||||||||||| ||||||||||||||||||||| |||            
T  42036316 cttaattatacttttcatcttcgcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatg----tttt 42036221  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
       |||||||||||| |||  || |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  42036220 tttgcagttttagtcgtattctcatatttccaactccagaaatgcacaaaaatgacagttttagtccaaccacctat 42036144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 282
Target Start/End: Original strand, 15255855 - 15256011
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  15255855 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-----ttt 15255949  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaacca 282  Q
       |||||||||||||||||| ||||||||||||||          ||||||||||||||||||||||||||    
T  15255950 tttgcagttttagtcctatctccctatttccaactc----------cataaatgacagttttagtccaacca 15256011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 288
Target Start/End: Complemental strand, 35694421 - 35694242
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||||||   |||||||| ||||||  ||||||||| ||  | ||||||||| ||||||||||||| ||||||| ||              
T  35694421 ttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatattttttttttt 35694322  T
Q  212 nn---gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
         || ||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35694321 tttttgctgttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatg 35694242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 276
Target Start/End: Original strand, 5730819 - 5730979
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||| ||| ||||| ||||||||||||||||||||||| ||||||| |||            
T  5730819 cttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatg-----ttt 5730913  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtc 276  Q
       || |||||||||||| || |||||||  ||||| ||||||| ||| |||||||||||||||||    
T  5730914 tttgctgttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttagtc 5730979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 41260273 - 41260409
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  41260273 cttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-----ttt 41260367  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaa 252  Q
       |||||||||||| ||||| ||||||||||||||||||||    
T  41260368 tttgcagttttagtcttatctccctatttccaactctagaaa 41260409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 16578110 - 16578285
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| ||||||| || | ||||||||||||||| |||| ||||| || |||||||||||| |||||||||||||||||| || |||            
T  16578110 cttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-----ttt 16578204  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgc-acataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||| ||||||||| |||||||||||||| |||||||| | | |||  |||||||||||||||||| |||||||    
T  16578205 tttgcagttttggtcctatctccctatttccaactccagaaacgcaaaaaaaaaaacagttttagtccaaccatctatgct 16578285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 287
Target Start/End: Original strand, 26252863 - 26252982
Alignment:
Q  163 atctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaa 262  Q
    |||||||||||||| ||||||||||||||||||||| |||           |||||||||||||||||| |||||||||||||| |||||||| || |||    
T  26252863 atctcttttaaatcgaacaaaatcgtccctaaactatatgttttgt-----gcagttttagtcctatctccctatttccaactccagaaacgctcagaaa 26252957  T
Q  263 tgacagttttagtccaaccacctat 287  Q
    |||||| ||||||||||||||||||    
T  26252958 tgacagatttagtccaaccacctat 26252982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 2208715 - 2208891
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||||||||||| ||||   ||||||||||||||| |||||| ||| ||||| ||||||||| ||||||||||||| ||||||| ||            
T  2208715 acttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatat----attt 2208810  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
         || |||||||| ||||| ||||||| ||| || ||||||| ||| |||| | ||||||||||||||||||||||||    
T  2208811 ttttacaattttagtcatatctccctattttcaattccagaaacgtacagaaataatagttttagtccaaccacctatgct 2208891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 35163817 - 35163874
Alignment:
Q  233 cctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  35163817 cctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccacctatgct 35163874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 7910618 - 7910702
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    |||||||||| |||||||||||  ||||||| ||||||| |||||||||  || |||||||||||| ||||||||||||||||||    
T  7910618 cttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaa 7910702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 28877432 - 28877350
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaa 194  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||  || |||||| ||||  |||||||| ||||||||    
T  28877432 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccctaa 28877350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 35426917 - 35426989
Alignment:
Q  218 ttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    ||||| |||||||| |||||||||||||| | ||||||||| ||||||||||||||||| |||||| ||||||    
T  35426917 ttttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccacatatgct 35426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 18674150 - 18674237
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||| |||||||| | | ||||||||| ||| |||| ||||  |  | |||||||||| |||||||||||||||||||||    
T  18674150 cttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaacta 18674237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 33742924 - 33742975
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtctt 162  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| |||||||    
T  33742924 cttaattacacttttggtcctcgtgttttgacctactcacgaaactggtctt 33742975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 9930200 - 9930151
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||||||||| || ||||| |||| |||||    
T  9930200 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtc 9930151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 13225182 - 13225131
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtctt 162  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||||    
T  13225182 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtctt 13225131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 10047155 - 10047093
Alignment:
Q  136 ttttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||| ||||||| |||||| ||||| | ||||||||||| |||||||| ||| ||||||||    
T  10047155 ttttgatcaactcacgaaaatagtcttgtttcttttaaatcgaacaaaatggtctctaaacta 10047093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 7910738 - 7910791
Alignment:
Q  235 tatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
    |||||| ||||| ||||| ||||| ||||||||||||||||| |||||| ||||    
T  7910738 tatttctaactcaagaaatgcacagaaatgacagttttagtcaaaccacatatg 7910791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 11656457 - 11656506
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  11656457 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 11656506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 11657000 - 11656951
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  11657000 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 11656951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 31133222 - 31133271
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  31133222 cttaattacacttttggtcctcgtgttttgccctactcacgaaactggtc 31133271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 34541091 - 34541042
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  34541091 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 34541042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 41681136 - 41681185
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  41681136 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 41681185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 9928912 - 9928960
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||| |||||| | ||||| |||| |||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtc 9928960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 12571865 - 12571913
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggt 159  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| ||||    
T  12571865 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 12571913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 18805167 - 18805238
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaa 184  Q
    |||||||||||||||||||  | |||||||| | |||| ||||||||| |  ||||||||||||| |||||||    
T  18805167 ttaattacacttttggtccctgcattttgacaagctcacgaaaatggt-tcttctcttttaaatcgaacaaaa 18805238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 35426845 - 35426893
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||| |||||   ||||||||||||||| ||||||||||    
T  35426845 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtc 35426893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 24929852 - 24929673
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| |||||||||| | ||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||             
T  24929852 cttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatatttttt 24929753  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||    
T  24929752 tttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacgacctatgct 24929673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 9181534 - 9181708
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| ||             
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-----tttt 9181628  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  9181629 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 15712367 - 15712541
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| ||             
T  15712367 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-----attt 15712461  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15712462 tttgtagttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaaccacatatgct 15712541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 99 - 290
Target Start/End: Complemental strand, 25637754 - 25637568
Alignment:
Q  99 ataaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||| ||||| | ||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| |||||||    
T  25637754 ataacaaatagatttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 25637655  T
Q  199 aatgnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
     |||           |||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  25637654 tatgtttttt-----gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccaaccacctatgct 25637568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 25637199 - 25637374
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | || |||||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||||| |||            
T  25637199 cttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt- 25637297  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       | |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  25637298 ---gtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttaagccaaccacctatgct 25637374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 48248136 - 48247961
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   |||||||||||||||  ||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  48248136 cttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt- 48248038  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  48248037 ---gcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 48247961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 787329 - 787152
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||  ||             
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttg-tttttaat 787231  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      | |||||||||| ||||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||    
T  787230 ttgtagttttagtcttatcttcatattttcaactccagaaacgcacataaatgatagttttagtccaaccacatatgct 787152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 28688041 - 28687869
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| |||||||||| | ||||||||||||||| |||| || || || |||||||||||| ||||||||||||||||||||| |||             
T  28688041 ttaattaca-ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--- 28687946  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  28687945 --gcacttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28687869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 9181956 - 9181779
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||| | ||||||||||| ||| |||| || || || |||||||||||| ||||||||||||||||||||| |||            
T  9181956 cttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttt 9181857  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  9181856 tc--cagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 9181779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 11971336 - 11971514
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||| ||||||||||||   ||||||||| ||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  11971336 cttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttt 11971435  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  11971436 tta-cagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaaccacctatgct 11971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 48247589 - 48247767
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||| ||||||| |||| ||||| || ||||||||||||||||||||||||||||||| || ||             
T  48247589 cttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatat-attttttt 48247687  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  48247688 tttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccacctatgct 48247767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 7732490 - 7732664
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| |||||||||| | ||||||| ||||||| |||| ||||| || |||||||||||| ||||||||||||| ||||||| |||            
T  7732490 cttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 7732587  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7732588 ---gcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgct 7732664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 27245205 - 27245380
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| ||||| || |||||||||||| |||||||||||||| |||| | |||            
T  27245205 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgttttttt- 27245303  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| | |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  27245304 ---gcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatgct 27245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 5745642 - 5745815
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||| | | ||||||| |||             
T  5745642 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatgtttttt--- 5745738  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  5745739 --gcagttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5745815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 16081301 - 16081475
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||  |||||||||||||||| | |||||||| ||||| ||||||||| ||||||||||||| |||||||  ||            
T  16081301 cttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttg-----ttt 16081395  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| | |||| |||| |||||||||||||||||||||||| ||||||    
T  16081396 tttgcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaaccacatatgct 16081475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 26026320 - 26026494
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||||| || |||||||||||| ||||||||||||| ||||||| |||             
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatg----ttttt 26026415  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||| ||||| ||||||| |||||| ||||||||||| |||||||||||||||| ||||||| ||||||    
T  26026416 ttgcagttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacatatgct 26026494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 111 - 288
Target Start/End: Complemental strand, 16081843 - 16081671
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||| ||||||||| | ||||||||||||||| |||| || || || |||||||||||| ||||||||| ||||||||||| |||            
T  16081843 cttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt-- 16081746  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||| ||||    
T  16081745 ---gcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttagtccaaccacttatg 16081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 111 - 288
Target Start/End: Complemental strand, 26048490 - 26048319
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||| |  |||||||||||||| |||| ||||| || ||||||||||||||||||||| |||| ||||||| |||            
T  26048490 cttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatgttttt--- 26048394  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||||||||||| ||||| |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||    
T  26048393 ---gcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttagtccaaccacctatg 26048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 11973945 - 11973772
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| |||||||||| | ||||||||||||  | |||| ||||  || |||||||||||  |||||||||||||||||| ||||||             
T  11973945 ttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatggttttt--- 11973849  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      ||||||||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  11973848 --gcagttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 11973772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 2758242 - 2758067
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||| ||||||  ||||||| |||||||||  || |||||||||||| ||||||||||||| ||||||| |||            
T  2758242 cttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatg-----ttt 2758148  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgcta 291  Q
       |||| ||||||| ||||  |||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||    
T  2758147 tttgcaggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagttttagtccaaccacttatgcta 2758067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 39388812 - 39388636
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| | ||| || |||||||||||| |||||||||||| |||||||| |||            
T  39388812 cttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatg----tttt 39388717  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcac-ataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| ||||||| |||||| | |||||||| | |||||||||||||||||||||||| ||||||    
T  39388716 tttgcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaaatgacagttttagtccaaccacatatgct 39388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 290
Target Start/End: Complemental strand, 35161342 - 35161171
Alignment:
Q  115 attacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnnng 214  Q
    ||||||||||||||||| | ||||||||||||||| | || ||||| || |||||||||||| ||||||||||||||||||||| |||           |    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg----tttttttg 35161247  T
Q  215 cagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    ||||||||||| ||||| |||||||||||||| | |||||||||||||||| |||||| | || ||||||||||||    
T  35161246 cagttttagtcatatctccctatttccaactccataaacgcacataaatgatagttttgggccgaccacctatgct 35161171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 290
Target Start/End: Complemental strand, 27245758 - 27245574
Alignment:
Q  101 aaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaa 200  Q
    |||||| ||||||||||| |||||||||| |   ||||||| ||||||| |||||||||| ||||| ||||||||| ||||||||||||| |||| || |    
T  27245758 aaaaaaaaaacttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattata 27245659  T
Q  201 tgnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    ||           ||| |||||||| ||||| |||||||||||||| ||||||||||| |||| | ||||||||||||||||||||||||    
T  27245658 tgtatttt-----gcaattttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttagtccaaccacctatgct 27245574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 112 - 288
Target Start/End: Complemental strand, 14311830 - 14311659
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||| ||| |   | |||||||||||||  ||||||||| ||||| ||||||||| ||||||||||||  ||||||| |||             
T  14311830 ttaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgtttttt--- 14311734  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
      |||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  14311733 --gcagttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatg 14311659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 288
Target Start/End: Original strand, 786784 - 786957
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| ||||   ||||||||||||||| |||||||||| || || ||||||||| ||||||||  ||| ||||||| |||            
T  786784 cttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgttttttt- 786882  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
       |||||||||||||||||| |||||||||||||| | ||||||||| || ||||||||||||| ||||||||||||    
T  786883 ---gcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaaccacctatg 786957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 271
Target Start/End: Original strand, 28687595 - 28687750
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||| |   ||||||||||||||| |||||||||  ||||| || |||||| ||||||||||||| ||||||| ||             
T  28687595 cttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatat-----tttt 28687689  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttt 271  Q
       |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28687690 tttgcagttctagtcctatcttcctatttccaactccagaaacgcacataaatgacagttt 28687750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 34595316 - 34595142
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta-aatgnnnnnnn 209  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||| |   ||||||||||| |||||||||||||||||||||  |||           
T  34595316 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatg------t 34595223  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        ||||||||||| ||| |  | ||||| |||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  34595222 ttttgcagttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagttttagtccaaccacccatgct 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 5746184 - 5746009
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | |||||||| |||||| |||| || |||   |||||||||||| ||||||| ||||| ||||||| |||            
T  5746184 cttaattacacttttggtccttgcattttgactaactcacgaaattgatctgc-ctcttttaaatcgaacaaaaccgtccataaactatatgtttttttt 5746086  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||| |||||||| ||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||    
T  5746085 ---gcaattttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgct 5746009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 7733031 - 7732857
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| ||||||| || ||||| ||||||||| ||||||||||||| ||||||| |||            
T  7733031 cttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-----ttt 7732937  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||| |||||||||||||| ||||||| |||||| | ||| ||||| |||| ||| || |||||||||||||||||||    
T  7732936 tttgcaattttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaaccacctatgct 7732857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 5334364 - 5334276
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||| ||| || |||||||||||| |||||||||||||||||||||    
T  5334364 acttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaacta 5334276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 26026861 - 26026688
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||||||  ||||||||| || ||| |||||||||| ||||| || |||||| ||||||| | ||| ||||||| |||             
T  26026861 ttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatgtttttt--- 26026765  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||  ||||| |||||||||||||| | ||||||| | |||||||||||||||||||||||||||||||    
T  26026764 --gcagttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaaccacctatgct 26026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 5333882 - 5333969
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||| |||| | ||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||    
T  5333882 cttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaacta 5333969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 14311417 - 14311492
Alignment:
Q  215 cagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||| |||||||| |||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||    
T  14311417 cagttttaatcctatctccctatttccaactccataaacacacataaatgacagttttagtccaaccacctatgct 14311492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 16917715 - 16917802
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||| ||| |||||||    
T  16917715 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 16917802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 34594584 - 34594758
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta-aatgnnnnnn 208  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||  |||    |||||| |||||||||||||| |||||||||||  |||          
T  34594584 acttaattacacttttggtcctcgcattttgactaactcacgaaaattatctcgcatcttttcaatcaaacaaaatcatccctaaactatcatg------ 34594677  T
Q  209 nnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
         ||||||||||||||| |  ||||||| |||||| ||||||  |||||||||| ||||||||||||||||||||||||    
T  34594678 tttttgcagttttagtccta-ccccctattttcaactcgagaaacaaacataaatgatagttttagtccaaccacctatgct 34594758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 39137077 - 39136991
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaact 197  Q
    |||||||||||||||| ||||||||||||||||  |||| |||||||||| |  |||||||||||| ||||||||||||| ||||||    
T  39137077 cttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 26048067 - 26048124
Alignment:
Q  233 cctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  26048067 cctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 26048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 49064036 - 49064123
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| ||  |||||| ||||  ||||||||| ||| |||||||    
T  49064036 cttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaacta 49064123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 18535419 - 18535340
Alignment:
Q  118 acacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||||||||   ||||||||||||||| || |||||| ||||| ||||||| |||||||||||||    
T  18535419 acacttttggtcctcgtattttgacatgctcaagaaaatggtc-tacctctttcaaatcgaacaaaaccgtccctaaacta 18535340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 39136688 - 39136775
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||| |||| | |||||||||| |||| |||||||||  |  |||||| ||||| |||||||||||||||||||||    
T  39136688 cttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaacta 39136775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 9394273 - 9394187
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||| ||| |||||||||| ||||  ||||||||| || || ||| ||||| ||||||| |||||||||||||    
T  9394273 cttaattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaacta 9394187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 35160906 - 35160976
Alignment:
Q  218 ttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgc 289  Q
    |||||||||||||| ||||||| |||||| |||  |||||| |||||| |||||||||||||||||||||||    
T  35160906 ttttagtcctatctccctattttcaactccagag-cgcacagaaatgatagttttagtccaaccacctatgc 35160976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 33881030 - 33880969
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtc 276  Q
    |||||||||||| ||||  ||||||| |||||| |||||||||||||||||||||||||||||    
T  33881030 gcagttttagtcttatcc-cctattttcaactccagaaacgcacataaatgacagttttagtc 33880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 45815346 - 45815430
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||||| | |||||||||| ||   |||||||||| |  |||||| ||||| ||||||| |||||||||||||    
T  45815346 cttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaacta 45815430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 9393737 - 9393817
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    ||||||||||||||||| |||||| ||||||| || |||| |||||| |||||  |||||| ||||| ||||||| |||||    
T  9393737 acttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcc 9393817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 26047950 - 26048046
Alignment:
Q  102 aaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||| | ||||||||||||||| | ||   |||| |||||||||| |||||||||| ||||| ||||||||| || ||||| |||| |||||||    
T  26047950 aaaaatagaattaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaacta 26048046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 33880622 - 33880706
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    ||||||| || ||||||||||||||||||||||| ||||  ||||| ||  |  |||||| ||||| ||||||| ||||||||||    
T  33880622 cttaattgcatttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaa 33880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 4477704 - 4477791
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||| ||| ||||   ||||||||||| ||| ||||||||||    |||||||||||  || ||||||||||||||||||    
T  4477704 cttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaacta 4477791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 35579429 - 35579350
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    |||||||||||||||| |||||| ||||||| || |||| ||||||| |  |  |||||| ||||||||||||| |||||    
T  35579429 cttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgtcc 35579350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 19830423 - 19830473
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtctt 162  Q
    ||||||||||||||||||||||| ||||| || ||||| |||| |||||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtctt 19830473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 274
Target Start/End: Complemental strand, 32427463 - 32427406
Alignment:
Q  216 agttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttag 274  Q
    |||||||||||| || |||||||| |||||||| ||||||| | |||||||||||||||    
T  32427463 agttttagtcct-tcctcctattttcaactctaaaaacgcagagaaatgacagttttag 32427406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 19590527 - 19590576
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  19590527 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 19590576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 34533793 - 34533842
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  34533793 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 34533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 35288905 - 35288954
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||| |||||||||| || ||||| |||| |||||    
T  35288905 cttaattacacttttggtcatcgtattttggcctactcacgaaactggtc 35288954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 38859184 - 38859135
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  38859184 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 38859135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 5184431 - 5184479
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||| |||||||||| | ||||||||||||||| |||| |||||    
T  5184431 ttaattacatttttggtccttggattttgaccaactcacgaaattggtc 5184479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 9394176 - 9394117
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttag 274  Q
    |||||||||||||||||| |||||||||||||  | |||| || | |||||||||||||||    
T  9394176 gcagttttagtcctatct-cctatttccaacttcaaaaacacaaagaaatgacagttttag 9394117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 14311316 - 14311404
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||| | ||||||| || | ||||| |||||||||  ||| ||||  || |||||||||||  || ||||||||||||||||||    
T  14311316 acttaattatatttttggtacttgcattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaacta 14311404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 23952732 - 23952764
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgacc 143  Q
    |||||||||||||||||||||||| ||||||||    
T  23952732 cttaattacacttttggtcctcgtgttttgacc 23952764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 35160660 - 35160704
Alignment:
Q  116 ttacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||   ||||||||||||||| ||||||||||    
T  35160660 ttacacttttggtcctaccattttgaccaactcacgaaaatggtc 35160704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 7e-46; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 4967315 - 4967139
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||  |||||||||||||||  |||||||||||| |||||||||||| ||||||||||||||||||||| |||            
T  4967315 cttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg---ttttt 4967219  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||| | |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  4967218 tttgcagttttagtcctatatccctatttctaactctagaaacgcacataaatgatagttttagtccaaccacatatgct 4967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 15029853 - 15029679
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||| ||||||| |||            
T  15029853 cttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatg-----ttt 15029759  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||| | |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15029758 tttgcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 15029679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 21371240 - 21371066
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||| | |||||||||||||||  ||| ||||| || |||||||||||||||||||||||||||||||||| |||            
T  21371240 cttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatgtttttt-- 21371143  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  21371142 ---gcaattttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgct 21371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 28290188 - 28290014
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||||  ||||||||| ||||||||||||| ||||||| |||            
T  28290188 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 28290091  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  28290090 ---gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccatctatgct 28290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 18150268 - 18150093
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||| || |||| |||||||||| |||||| |||| ||||| || |||||||||||| ||||||||| ||||||||||| |||            
T  18150268 cttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgttttttt- 18150170  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  18150169 ---gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttagttcaaccacctatgct 18150093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 111 - 288
Target Start/End: Original strand, 28289686 - 28289858
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||| | ||||||||||||||| |||| | ||| || |||||||||||| |||||||||||||||||| || |||            
T  28289686 cttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttc- 28289784  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
        ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  28289785 ----cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatg 28289858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 38900648 - 38900818
Alignment:
Q  113 taattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnnn 212  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| || || |||||||||||| |||||||||||||||||| || |||              
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-----ttttt 38900742  T
Q  213 ngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
     |||||||||||||||||| |||||||||||||| | ||||| |||||||||||||  ||||||||||||||||||||    
T  38900743 tgcagttttagtcctatctccctatttccaactccataaacgtacataaatgacag--ttagtccaaccacctatgct 38900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 19291358 - 19291533
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||  |||||||| |||||||  ||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  19291358 cttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt- 19291456  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| | |||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  19291457 ---gcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 19291533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 15115636 - 15115465
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| |||||  ||||||||||||||| |||||||||| || |||||||||||| ||||||||||||| ||||||| ||             
T  15115636 cttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactatat--------t 15115545  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||  |||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||||    
T  15115544 tttgcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagttttagttcaaccacatatgct 15115465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 4966819 - 4966991
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| ||  |  |||||||||||| ||||||||||||||||||||| |||             
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatg-----tttt 4966913  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||| ||||  |||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||||    
T  4966914 tagcagttttagtcatatc-ccctatttccaactctagaaatgcacagaaatgacagttttgggccaaccacctatgct 4966991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 8419164 - 8418991
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| ||| |||||| ||||| ||||||||  ||||||||||||| ||||||| ||             
T  8419164 cttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatat------ttt 8419071  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||||||||    
T  8419070 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttaatccaaacacctatgct 8418991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 32697770 - 32697593
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||| | | ||||||||||||||| |||| ||||| || |||||||||||| |||| |||||||||||||||| |||            
T  32697770 cttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatg--ttttat 32697673  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||  || || |||||||||||||| |||||| |||| ||||||||  |||||||||||||||||||||    
T  32697672 tttgcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 98 - 290
Target Start/End: Original strand, 22651334 - 22651521
Alignment:
Q  98 gataaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaact 197  Q
    |||| ||| |||||||||||||| ||||||| ||||||||||||||| |||| | |||||||| |  |||||||||||||||||||| | ||| ||||||    
T  22651334 gatagaaattaaacttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaact 22651433  T
Q  198 a-aatgnnnnnnnnnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |  |||           ||||||||||||||| || | ||||| |||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  22651434 atcatg------tttttgcagttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagttttagtccaaccacctatgct 22651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 20266458 - 20266372
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||| |||||||||||||||||||||||||| || | |||||||||| | ||||||| ||||| |||||||||||||||||||||    
T  20266458 ttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaacta 20266372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 5161683 - 5161759
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||| |||||||||||||||||||  | ||||||| | |||||||||||||||| ||||||||||||||    
T  5161683 gcagttttagtcttatcttcctatttccaacttcaaaaacgcatagaaatgacagttttagttcaaccacctatgct 5161759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 10721788 - 10721867
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    |||||||||| |||||||||||  |||||||||| |||| |||||||||||| ||||||| ||||| |||||||||||||    
T  10721788 cttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcc 10721867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 18149735 - 18149822
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||| ||||   |||| |||||||||| |||||||||| ||||| ||||||||| ||||||||||||| |||||||    
T  18149735 cttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 18149822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 290
Target Start/End: Original strand, 39083360 - 39083536
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    ||||||||||||||| | ||||   ||||||||||||||| |||||||||| ||| | ||||||||| |||||||| || | ||||||| ||            
T  39083360 acttaattacacttt-gatcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatat---atatt 39083455  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||| ||||| | |||||||||||| |||||| |||| |||||||||||||||||||| ||| ||||||    
T  39083456 ttttgcagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttagtccaatcacatatgct 39083536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 14340480 - 14340554
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatg 288  Q
    ||||||||| ||||||||  ||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||    
T  14340480 gcagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaaccacttatg 14340554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 282
Target Start/End: Complemental strand, 38901184 - 38901020
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   |||||||| ||  || |||||||||| || |  ||||||||| ||||||||||||| ||||||| |||            
T  38901184 cttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 38901087  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaacca 282  Q
       |||||||||||  ||||| | ||||||||||   |||||||||||||||||||||||||||||||||||    
T  38901086 ---gcagttttagttatatctccttatttccaacc--agaaacgcacataaatgacagttttagtccaacca 38901020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 282
Target Start/End: Complemental strand, 14340953 - 14340785
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||| ||||||| || | ||||||||||||||| |||| ||||| ||  ||||||||||| ||||||||||||| ||||||| ||              
T  14340953 ttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatat--attttttt 14340856  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaacca 282  Q
      | |||||||||||||||| | |||||||||||| | ||||| | | ||||||||||||||||| |||||    
T  14340855 ttgtagttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttagtcaaacca 14340785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 14340401 - 14340478
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtc 189  Q
    ||||||||| ||||||||||   ||||||| ||||||| |||||||||| ||||| ||||||||| ||||||||||||    
T  14340401 ttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14340478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 22651755 - 22651715
Alignment:
Q  250 aaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22651755 aaacgcacataaatgacagttttagtccaaccacctatgct 22651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 28595181 - 28595269
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||| |||||||||||||||||||||||||| || |  ||||||||| |   ||||| ||| | |||||||||||||||||||||    
T  28595181 acttaattgcacttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaacta 28595269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 17260764 - 17260677
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||| ||||||||||||||| ||||||||||| ||| ||||||| |  || |||||| ||||| ||||||| | |||||||||||    
T  17260764 cttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaaccatccctaaacta 17260677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 22651855 - 22651768
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||| ||||||| |||||||||| |||| |||||||||  |  || ||| ||||| ||||||||||||| |||||||    
T  22651855 cttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaacta 22651768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 41834603 - 41834524
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||||| |  |||||| | ||| ||||||| |||||    
T  41834603 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc 41834524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 21370798 - 21370870
Alignment:
Q  218 ttttagtcctatcttcctatttccaactctagaaacgc--acataaatgacagttttagtccaaccacctatg 288  Q
    |||||||||||||| |||||||||||||| ||||||||  | | ||||| |||||||||||| ||||||||||    
T  21370798 ttttagtcctatctccctatttccaactccagaaacgcaaaaaaaaatgtcagttttagtccgaccacctatg 21370870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 192
Target Start/End: Complemental strand, 28495375 - 28495294
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccct 192  Q
    |||||||||||||||||||  | ||||||||||| |||| |||||||||| |  |||||| ||||| |||||||| ||||||    
T  28495375 cttaattacacttttggtctccatattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtccct 28495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 5162113 - 5162029
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    |||||||||| ||||  |||| | ||||||||||||||| || | | ||| || |||||||||||| ||||||||||||||||||    
T  5162113 cttaattacattttttatccttgcattttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaa 5162029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 32305831 - 32305907
Alignment:
Q  122 ttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||| ||| ||||||| || |||| |||||| ||  || |||||||||||| |||||||||||||||||||||    
T  32305831 ttttggtcatcgcattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaacta 32305907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 16752584 - 16752671
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||||  | |||||||||| |||| ||||||| || |   ||||| ||||| ||||||||||||| |||||||    
T  16752584 cttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaacta 16752671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 27307063 - 27307138
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatc 186  Q
    |||||||||||||||||| |||| ||||||||||||| | |||||||||| | | ||||| ||||  |||||||||    
T  27307063 cttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatc 27307138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 21370689 - 21370775
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||| | |||| |||||  |||||||||||||| | |||||||||  ||||| ||||||||| ||||||||||||  |||||||    
T  21370689 ttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaacta 21370775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 164193 - 164242
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| |||||    
T  164193 cttaattacacttttggtcctcgtgttttgacctactcacgaaactggtc 164242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 13557011 - 13557072
Alignment:
Q  128 tcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtc 189  Q
    |||||| |||||||||| |||| |||||||||| |  |||||| ||||||||||||||||||    
T  13557011 tcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgtc 13557072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 16753115 - 16753066
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggt 159  Q
    ||||||||||| |||||||| ||| ||||||||||||||| |||||||||    
T  16753115 acttaattacatttttggtcatcgcattttgaccaactcacgaaaatggt 16753066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 24362379 - 24362330
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||||||||| || ||||| |||| |||||    
T  24362379 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtc 24362330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 32697458 - 32697511
Alignment:
Q  237 tttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||| |||||| |||| ||||||||  |||||||||||||||||||||    
T  32697458 tttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 41834504 - 41834445
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttag 274  Q
    ||||||||||||||| || ||||||| ||||||| |||||||| | |||||||||||||||    
T  41834504 gcagttttagtcctacct-cctattttcaactcttgaaacgcagagaaatgacagttttag 41834445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 2865308 - 2865249
Alignment:
Q  101 aaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||  |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  2865308 aaaaaataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 2865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 14215233 - 14215272
Alignment:
Q  101 aaaaaataaacttaattacacttttggtcctcgtattttg 140  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  14215233 aaaaaaaaaacttaattacacttttggtcctcgtgttttg 14215272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 20260936 - 20261011
Alignment:
Q  120 acttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaa 195  Q
    |||||||||||||  |||||||| | |||| ||||||||||    |||||| |||||||||||||||| |||||||    
T  20260936 acttttggtcctcacattttgactagctcatgaaaatggtcccgcctctttcaaatcaaacaaaatcgaccctaaa 20261011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 27307604 - 27307517
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||| ||||||||||| || ||||||||||  ||| |||||||||  |  |||||| ||||| ||||||| ||||| |||||||    
T  27307604 cttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaacta 27307517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 5819472 - 5819423
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  5819472 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 5819423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 8647440 - 8647489
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  8647440 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 8647489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 18183512 - 18183463
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  18183512 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 18183463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 19359679 - 19359630
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  19359679 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 19359630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 24331561 - 24331610
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| |||||| | ||||| |||| |||||    
T  24331561 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtc 24331610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 5818932 - 5818980
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 5818980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 10721886 - 10721945
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttag 274  Q
    ||||||||||||||| || ||||||| |||||| ||||||| | | |||||||||||||||    
T  10721886 gcagttttagtcctacct-cctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 15372415 - 15372367
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 15372367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 27307161 - 27307220
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttag 274  Q
    |||||||||||| || || ||||||| |||||| ||||||||| | |||||||||||||||    
T  27307161 gcagttttagtcttacct-cctattttcaactccagaaacgcatagaaatgacagttttag 27307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 25472557 - 25472382
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| ||||   ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||| |||            
T  25472557 cttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt- 25472459  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25472458 ---gcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 25472382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 31073686 - 31073512
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | |||||||||| |||| |||| ||||| || |||||||||||| |||||||| |||||||||||| |||            
T  31073686 cttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttgt-- 31073589  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  31073588 ---gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 31073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 31574269 - 31574095
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| | ||| || |||||||||||| ||||||||||||||||||||| |||            
T  31574269 cttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-- 31574172  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  31574171 ---gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 31574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 112 - 290
Target Start/End: Original strand, 25468852 - 25469027
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||||||||||||||||   ||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||| |||             
T  25468852 ttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatg---tttttc 25468948  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||||| |||||||  || || ||||||||||| |||||||||||||| ||||||||||||||||    
T  25468949 ttgcagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagttttattccaaccacctatgct 25469027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 5114470 - 5114644
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||| ||||| ||||   ||||||| ||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||            
T  5114470 cttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-- 5114567  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||| ||||||||||||||    
T  5114568 ---gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagttcaaccacctatgct 5114644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 281
Target Start/End: Complemental strand, 5121013 - 5120848
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| |  || || |||||||||||| ||||||||||||||||||||| |||            
T  5121013 cttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-----ttt 5120919  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaacc 281  Q
       |||||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  5120918 tttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttaatccaacc 5120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 24640728 - 24640555
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    ||||||| ||||||||||||   ||||||| ||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||| |||             
T  24640728 ttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt--- 24640632  T
Q  212 nngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||| ||||| ||||||||||||||   ||||||||| ||||||||||| |||||||||||||||||||    
T  24640631 --gcagttttagtcttatctccctatttccaactccgaaaacgcacagaaatgacagttctagtccaaccacctatgct 24640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 111 - 287
Target Start/End: Complemental strand, 30251236 - 30251064
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| ||||  ||||||||||||||||  ||||| ||| ||||| ||||||||| ||||||||||||| |||||||  ||            
T  30251236 cttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtattttt- 30251138  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
       | |||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  30251137 ---gtagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaaccacctat 30251064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 31573722 - 31573901
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctctttt-aaatcaaacaaaatcgtccctaaactaaatgnnnnnnn 209  Q
    |||||||| ||||||||||||   ||||||||||||||| |||||| ||| ||| | |||| ||||| ||||||||||| | ||||||| |||           
T  31573722 cttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatatgttttttt 31573821  T
Q  210 nnnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        |||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  31573822 ttt-gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaaccacctatgct 31573901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 28636642 - 28636566
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  28636642 gcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28636566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 29891082 - 29891256
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||| ||||   |||||||| |||| | |||| || || || |||||||||| | ||||||| ||||||||||||| |||            
T  29891082 cttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatgtttttta- 29891180  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
        || ||||| | |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29891181 ----caattttaattctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 29891256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 29891526 - 29891453
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctat 287  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  29891526 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctat 29891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 289
Target Start/End: Complemental strand, 35163731 - 35163557
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||| || |||||||||| |||| |||||||||  |  |||||| ||||||||||||||||||||||||||| |||            
T  35163731 cttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactatatg---ttttt 35163635  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgc 289  Q
       ||||||||||||||| | |||||||| |||||| | |||| || | ||||||||||||||| || ||| |||||||    
T  35163634 tttgcagttttagtccta-cctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 28636294 - 28636381
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||| |||||||| | ||||||||||||||||| |||| ||||||||  ||||||||||| ||||||||||| |||||||||    
T  28636294 cttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaacta 28636381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 22534268 - 22534219
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22534268 cttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtc 22534219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 31073145 - 31073222
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgt 188  Q
    |||||||||||||||||||||   |||||||||||| || |||||||||| ||||| ||||||||| |||||||||||    
T  31073145 cttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgt 31073222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 35163187 - 35163265
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtcc 190  Q
    |||||||||||||| ||||||| |||||||||| ||||  ||||||||||| ||||||| ||||| ||||||| |||||    
T  35163187 ttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtcc 35163265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 30250791 - 30250867
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    |||| ||||||||  ||| |||||||||||||  ||||||||||| |||||||||||||||||||| ||| ||||||    
T  30250791 gcagctttagtccattctccctatttccaactacagaaacgcacagaaatgacagttttagtccaatcacttatgct 30250867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 33095716 - 33095803
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||| ||||||||||||||| ||||| | || |||  ||||||||||| | |||||| ||||| ||||||| |||||||||||||    
T  33095716 cttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaacta 33095803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 835383 - 835483
Alignment:
Q  98 gataaaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaact 197  Q
    |||||||| ||  ||||||| ||||||||||||||  ||||| | || |||| ||||||||||||  |||||| ||||| |||||||  |||||||||||    
T  835383 gataaaaattaggcttaattgcacttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaact 835482  T
Q  198 a 198  Q
    |    
T  835483 a 835483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 22534068 - 22534139
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaa 184  Q
    ||||||||||||||| ||| |||||||||| ||  |||||||||||||| | ||||||||||||| |||||||    
T  22534068 ttaattacacttttg-tccccgtattttgatcagttcaagaaaatggtcatgtctcttttaaatcgaacaaaa 22534139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 32836540 - 32836454
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaact 197  Q
    ||||||||||||||| ||||| | |||||||||| |||| |||||||||| |  |||||| ||||| ||||||| ||| | ||||||    
T  32836540 cttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaact 32836454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 10900473 - 10900424
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||||||||| || ||||| |||| |||||    
T  10900473 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtc 10900424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 18297742 - 18297669
Alignment:
Q  102 aaaaataaacttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaat 175  Q
    ||||| |||||||||||||||||| ||| ||| ||||| ||||||||| |||| ||||| | ||| ||||||||    
T  18297742 aaaaaaaaacttaattacacttttagtcttcgaattttaaccaactcacgaaattggtcatctcttttttaaat 18297669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 28472639 - 28472688
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  28472639 cttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtc 28472688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 29859828 - 29859877
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  29859828 cttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtc 29859877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 31073250 - 31073290
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacg 254  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  31073250 gcagttttagtcatatcttcctatttccaactccagaaacg 31073290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 140
Target Start/End: Original strand, 29033435 - 29033465
Alignment:
Q  110 acttaattacacttttggtcctcgtattttg 140  Q
    |||||||||||||||||||||||||||||||    
T  29033435 acttaattacacttttggtcctcgtattttg 29033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 31242809 - 31242895
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||  ||||| ||||||||||||||| ||||||| || |  || ||||||||| |||| ||  ||||| ||||||    
T  31242809 ttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaacataactgtccccaaacta 31242895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 11445530 - 11445481
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  11445530 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 11445481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 12935159 - 12935208
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  12935159 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 12935208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 15828184 - 15828135
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  15828184 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 15828135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 18257680 - 18257631
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||| ||||||||||||||| |||||||| ||||| |||| |||||    
T  18257680 cttaattatacttttggtcctcgtgttttgacctactcacgaaactggtc 18257631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 20741102 - 20741151
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  20741102 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 20741151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 22219896 - 22219847
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  22219896 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 22219847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 23074001 - 23074050
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  23074001 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 23074050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 23075671 - 23075622
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  23075671 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 23075622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 29891628 - 29891579
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||   ||||||||||||||  ||||||||||    
T  29891628 cttaattacacttttggtcctaccattttgaccaactcgtgaaaatggtc 29891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 30250723 - 30250772
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||| |||||||||| | ||||||||||||||| |||| |||||    
T  30250723 cttaattacaattttggtccttgcattttgaccaactcacgaaattggtc 30250772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 3835268 - 3835220
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||  || |||||||| ||||| ||||||||||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtc 3835220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 18504922 - 18504970
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    ||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 18504970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 46268 - 46443
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||| ||||||||||||||| ||||||||||||| | |||||||||  || |||||||||||| ||||||||| ||||||||||| |||            
T  46268 cttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatg----tttt 46363  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       |||||||||||| ||||| ||||||||||| || | ||| ||||| |||||||||||||||||||||||||||||||    
T  46364 tttgcagttttagtcatatctccctatttccaattccataaatgcacaaaaatgacagttttagtccaaccacctatgct 46443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 46812 - 46637
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||| ||| | ||||||||| ||||||||||||  ||||||| |||            
T  46812 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatg----tttt 46717  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       | ||||||||| |||||  |||||||||||||| | |||||||||||||||||| |||| |||||||||||||||||    
T  46716 tttgtagttttagttctatcaccctatttccaactccaaaaacgcacataaatgacaattttggtccaaccacctatgct 46637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 6394 - 6568
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||| |||||||||||||   ||||||| ||||||| |||||||||  ||||| ||||||||| ||||||||||||| |||| || |||            
T  6394 cttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttttt-- 6491  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||| ||||||    
T  6492 ---gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 6939 - 6761
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||| ||||||||||| | ||||||||||| | | |||| ||||||||  ||||||||||| ||||||||||| ||||||||| |||             
T  6939 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgttttttt-- 6842  T
Q  212 nngcagttttagtccta----tcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||    ||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  6841 --gcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 290
Target Start/End: Original strand, 6412 - 6586
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnn 210  Q
    ||||||| |||||||||||||   ||||||| ||||||| |||||||||  ||||| ||||||||| ||||||||||||| |||| || |||            
T  6412 cttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttttt-- 6509  T
Q  211 nnngcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
       ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||| ||||||    
T  6510 ---gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 290
Target Start/End: Complemental strand, 6957 - 6779
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactaaatgnnnnnnnnn 211  Q
    |||||||| ||||||||||| | ||||||||||| | | |||| ||||||||  ||||||||||| ||||||||||| ||||||||| |||             
T  6957 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgttttttt-- 6860  T
Q  212 nngcagttttagtccta----tcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
      |||||||||||||||    ||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  6859 --gcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 52; Significance: 8e-21; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 210881 - 210794
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||| |  |||||| ||||| ||||||| |||||||||||||    
T  210881 cttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaacta 210794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 205911 - 205824
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||||||||| |  |||||| ||||| ||||||| |||||||||||||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaacta 205824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 204931 - 205017
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||||||| |||||||||||| |||| ||  |||||| |  |||||| |||||||||||||| ||||||||||||    
T  204931 ttaattacacttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaacta 205017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 205361 - 205447
Alignment:
Q  112 ttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    ||||||||||||||| |||| |||||||||||| |||| ||  |||||| |  |||||| ||||| |||||| | ||||||||||||    
T  205361 ttaattacacttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaacta 205447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 78417 - 78493
Alignment:
Q  214 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 290  Q
    ||||||||||||||||||  ||||||||||||| ||||| ||| | |||||||| ||||||||||||||||||||||    
T  78417 gcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccacctatgct 78493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 609 - 522
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||||||||||| |||||| |||||||| | |||| ||||||||||||  |||||| ||||| |||||||  ||| ||||||||    
T  609 cttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaacta 522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 15642 - 15555
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaacta 198  Q
    |||||||| | ||||||| |||| ||||||| || |||| |||||||||| |  |||||| ||||| |||||||  ||||||||||||    
T  15642 cttaattagatttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaacta 15555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 4795 - 4844
Alignment:
Q  111 cttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtc 160  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| |||||    
T  4795 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 4844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 5335 - 5283
Alignment:
Q  110 acttaattacacttttggtcctcgtattttgaccaactcaagaaaatggtctt 162  Q
    ||||||||||||||||||||||||| ||||| || | ||| |||| |||||||    
T  5335 acttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtctt 5283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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