View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20480_low_11 (Length: 368)

Name: NF20480_low_11
Description: NF20480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20480_low_11
NF20480_low_11
[»] chr4 (46 HSPs)
chr4 (20-354)||(25896671-25897005)
chr4 (158-282)||(11264330-11264450)
chr4 (158-288)||(6987656-6987782)
chr4 (195-282)||(2977897-2977984)
chr4 (195-282)||(27123273-27123360)
chr4 (196-282)||(7367975-7368061)
chr4 (202-284)||(37636105-37636187)
chr4 (216-286)||(25487474-25487544)
chr4 (197-271)||(46797078-46797152)
chr4 (204-282)||(52388285-52388363)
chr4 (191-288)||(3639083-3639180)
chr4 (198-282)||(28615400-28615483)
chr4 (232-284)||(32420977-32421029)
chr4 (199-282)||(21043157-21043239)
chr4 (216-283)||(35743352-35743419)
chr4 (191-246)||(41097213-41097268)
chr4 (198-272)||(21157833-21157907)
chr4 (232-282)||(50746074-50746124)
chr4 (191-284)||(19304984-19305077)
chr4 (229-282)||(22796751-22796804)
chr4 (216-284)||(18628472-18628540)
chr4 (191-271)||(19394695-19394775)
chr4 (191-271)||(50298574-50298653)
chr4 (193-272)||(3549486-3549565)
chr4 (201-284)||(36462085-36462168)
chr4 (211-281)||(1017106-1017176)
chr4 (213-287)||(2811551-2811625)
chr4 (89-127)||(9841054-9841092)
chr4 (216-282)||(19429391-19429457)
chr4 (191-273)||(27725272-27725354)
chr4 (196-282)||(36577463-36577549)
chr4 (232-282)||(56186819-56186869)
chr4 (191-244)||(19429471-19429524)
chr4 (241-282)||(22662172-22662213)
chr4 (241-282)||(22666651-22666692)
chr4 (195-272)||(25434343-25434420)
chr4 (211-284)||(29600943-29601016)
chr4 (196-281)||(41701378-41701462)
chr4 (194-246)||(8074824-8074876)
chr4 (193-273)||(9680904-9680984)
chr4 (191-287)||(10172120-10172216)
chr4 (203-283)||(14172041-14172121)
chr4 (198-246)||(25434443-25434491)
chr4 (191-287)||(29467540-29467636)
chr4 (248-288)||(44638141-44638181)
chr4 (216-268)||(51555705-51555757)
[»] chr1 (65 HSPs)
chr1 (196-282)||(28467496-28467582)
chr1 (195-270)||(32515374-32515449)
chr1 (195-282)||(4549462-4549549)
chr1 (196-272)||(15709912-15709988)
chr1 (191-281)||(10199330-10199420)
chr1 (199-288)||(14559038-14559127)
chr1 (168-281)||(29723528-29723637)
chr1 (216-282)||(6659763-6659829)
chr1 (191-273)||(15579540-15579622)
chr1 (193-246)||(23373270-23373323)
chr1 (191-283)||(30257741-30257834)
chr1 (158-272)||(31517671-31517781)
chr1 (216-272)||(9507314-9507370)
chr1 (201-284)||(5157140-5157223)
chr1 (158-282)||(6292522-6292641)
chr1 (159-282)||(11695891-11696011)
chr1 (193-268)||(12763383-12763458)
chr1 (195-273)||(21012852-21012930)
chr1 (240-282)||(29045854-29045896)
chr1 (161-272)||(30815585-30815691)
chr1 (214-284)||(32548550-32548619)
chr1 (196-282)||(33723303-33723389)
chr1 (191-261)||(44422757-44422827)
chr1 (191-273)||(45327638-45327720)
chr1 (211-273)||(51256753-51256814)
chr1 (191-272)||(1662631-1662712)
chr1 (161-284)||(9602573-9602698)
chr1 (191-271)||(14737658-14737738)
chr1 (191-239)||(23407489-23407537)
chr1 (191-243)||(49692012-49692064)
chr1 (198-282)||(51929383-51929467)
chr1 (191-282)||(2035352-2035443)
chr1 (191-282)||(3597202-3597293)
chr1 (191-246)||(28935833-28935888)
chr1 (216-271)||(36070264-36070319)
chr1 (196-259)||(40485717-40485780)
chr1 (216-291)||(41638220-41638295)
chr1 (191-282)||(44031921-44032011)
chr1 (168-271)||(6231748-6231847)
chr1 (193-243)||(15566602-15566652)
chr1 (197-271)||(16322913-16322987)
chr1 (228-282)||(21002250-21002304)
chr1 (228-282)||(24460322-24460376)
chr1 (196-282)||(25719734-25719820)
chr1 (248-282)||(30014000-30014034)
chr1 (220-282)||(37241742-37241803)
chr1 (191-261)||(38170632-38170702)
chr1 (229-282)||(1565067-1565120)
chr1 (236-281)||(2832075-2832120)
chr1 (89-122)||(6659502-6659535)
chr1 (195-272)||(15581316-15581393)
chr1 (197-282)||(33976243-33976327)
chr1 (191-272)||(43420316-43420397)
chr1 (211-272)||(44936536-44936597)
chr1 (238-282)||(172494-172538)
chr1 (233-281)||(2522696-2522744)
chr1 (228-284)||(3215817-3215873)
chr1 (191-271)||(6976982-6977062)
chr1 (227-267)||(23370238-23370278)
chr1 (196-244)||(28467268-28467316)
chr1 (232-284)||(32859866-32859918)
chr1 (210-278)||(32958714-32958782)
chr1 (216-284)||(34668740-34668807)
chr1 (194-282)||(44115826-44115914)
chr1 (197-269)||(44928125-44928197)
[»] chr7 (40 HSPs)
chr7 (195-282)||(39542221-39542308)
chr7 (195-284)||(12234808-12234897)
chr7 (168-268)||(45078317-45078413)
chr7 (198-284)||(3836602-3836688)
chr7 (191-255)||(20553161-20553225)
chr7 (211-282)||(1418497-1418568)
chr7 (191-282)||(28691757-28691847)
chr7 (191-282)||(30751577-30751668)
chr7 (191-284)||(8427071-8427164)
chr7 (191-244)||(29574584-29574637)
chr7 (191-288)||(33894685-33894782)
chr7 (191-243)||(4966214-4966266)
chr7 (196-272)||(8094369-8094445)
chr7 (191-282)||(29287285-29287375)
chr7 (191-246)||(48157077-48157132)
chr7 (198-256)||(1431940-1431998)
chr7 (193-283)||(44615024-44615114)
chr7 (199-272)||(503279-503352)
chr7 (196-272)||(10079270-10079346)
chr7 (191-287)||(23214913-23215009)
chr7 (195-278)||(3019845-3019928)
chr7 (158-242)||(27626084-27626164)
chr7 (227-282)||(29363602-29363657)
chr7 (192-271)||(41040224-41040303)
chr7 (196-231)||(42281486-42281521)
chr7 (160-272)||(44808189-44808297)
chr7 (191-282)||(6977472-6977565)
chr7 (232-282)||(40598406-40598456)
chr7 (216-281)||(529445-529510)
chr7 (191-272)||(3610671-3610752)
chr7 (217-270)||(5288195-5288248)
chr7 (234-271)||(24363532-24363569)
chr7 (197-270)||(30496769-30496842)
chr7 (217-282)||(32791666-32791731)
chr7 (191-224)||(44989908-44989941)
chr7 (194-282)||(7087064-7087152)
chr7 (169-246)||(12834919-12834992)
chr7 (198-270)||(27121527-27121599)
chr7 (89-121)||(31002749-31002781)
chr7 (198-282)||(31341200-31341284)
[»] scaffold0199 (1 HSPs)
scaffold0199 (216-273)||(6893-6950)
[»] chr8 (43 HSPs)
chr8 (216-273)||(1664452-1664509)
chr8 (198-282)||(6496812-6496896)
chr8 (196-272)||(30191072-30191148)
chr8 (192-287)||(34770927-34771022)
chr8 (194-282)||(7008660-7008747)
chr8 (158-282)||(9700030-9700150)
chr8 (201-269)||(24326099-24326167)
chr8 (191-282)||(16162818-16162909)
chr8 (197-284)||(43393691-43393778)
chr8 (191-261)||(11569399-11569469)
chr8 (191-241)||(14949924-14949974)
chr8 (216-293)||(2487918-2487995)
chr8 (229-282)||(44236744-44236797)
chr8 (195-279)||(6950384-6950468)
chr8 (210-278)||(10075478-10075546)
chr8 (168-282)||(12361231-12361343)
chr8 (158-234)||(4055585-4055657)
chr8 (195-282)||(7878448-7878534)
chr8 (192-243)||(21130671-21130722)
chr8 (193-284)||(26410340-26410431)
chr8 (199-282)||(40356994-40357077)
chr8 (205-271)||(31884872-31884938)
chr8 (216-273)||(1889065-1889122)
chr8 (216-261)||(7918723-7918768)
chr8 (216-281)||(10939458-10939523)
chr8 (228-272)||(962260-962304)
chr8 (218-282)||(14926903-14926967)
chr8 (198-282)||(18356384-18356467)
chr8 (194-298)||(33553301-33553405)
chr8 (195-282)||(4560564-4560651)
chr8 (191-282)||(4763952-4764043)
chr8 (221-272)||(20672838-20672889)
chr8 (193-284)||(39551128-39551219)
chr8 (191-278)||(39881646-39881733)
chr8 (191-282)||(40071807-40071898)
chr8 (191-257)||(29169882-29169948)
chr8 (191-272)||(11415212-11415293)
chr8 (199-268)||(25881350-25881419)
chr8 (229-282)||(33696882-33696934)
chr8 (216-272)||(3953885-3953941)
chr8 (234-282)||(18331815-18331863)
chr8 (209-273)||(31315379-31315441)
chr8 (191-279)||(34080188-34080276)
[»] chr5 (44 HSPs)
chr5 (191-272)||(40534257-40534338)
chr5 (191-271)||(32172711-32172791)
chr5 (191-266)||(13781812-13781887)
chr5 (191-282)||(2092418-2092508)
chr5 (191-273)||(11457156-11457238)
chr5 (200-282)||(40335794-40335876)
chr5 (191-284)||(14980567-14980660)
chr5 (192-272)||(26516466-26516546)
chr5 (198-258)||(28586711-28586771)
chr5 (191-282)||(10638456-10638547)
chr5 (221-284)||(19177533-19177596)
chr5 (158-251)||(21768147-21768238)
chr5 (166-282)||(25705580-25705692)
chr5 (191-246)||(30217140-30217194)
chr5 (191-269)||(1019400-1019478)
chr5 (191-269)||(11667198-11667276)
chr5 (191-261)||(38047821-38047891)
chr5 (201-282)||(8820828-8820909)
chr5 (191-260)||(11700321-11700390)
chr5 (158-272)||(17258814-17258924)
chr5 (215-272)||(25720348-25720405)
chr5 (191-240)||(35963299-35963348)
chr5 (191-272)||(39257325-39257406)
chr5 (228-284)||(10771807-10771863)
chr5 (216-271)||(11684483-11684538)
chr5 (199-282)||(32849244-32849327)
chr5 (191-270)||(35095720-35095798)
chr5 (191-282)||(42646949-42647039)
chr5 (196-282)||(499652-499738)
chr5 (191-273)||(1899212-1899293)
chr5 (198-272)||(2568723-2568797)
chr5 (158-225)||(13604827-13604890)
chr5 (196-282)||(26004918-26005004)
chr5 (191-233)||(40499696-40499738)
chr5 (204-282)||(42181006-42181084)
chr5 (193-246)||(985673-985726)
chr5 (168-282)||(11714785-11714901)
chr5 (36-69)||(14714944-14714977)
chr5 (158-271)||(16944913-16945024)
chr5 (191-271)||(6109541-6109621)
chr5 (248-284)||(12334277-12334313)
chr5 (202-282)||(29336699-29336779)
chr5 (232-284)||(31723904-31723956)
chr5 (218-282)||(41277283-41277347)
[»] chr2 (43 HSPs)
chr2 (195-272)||(16503415-16503492)
chr2 (198-282)||(9996803-9996887)
chr2 (191-282)||(37276804-37276893)
chr2 (191-273)||(5759505-5759586)
chr2 (191-284)||(28803449-28803542)
chr2 (192-284)||(32364650-32364742)
chr2 (216-271)||(11513979-11514034)
chr2 (196-282)||(15120246-15120332)
chr2 (198-284)||(40417923-40418009)
chr2 (193-269)||(1318296-1318371)
chr2 (203-271)||(14209271-14209339)
chr2 (191-271)||(17221472-17221552)
chr2 (211-282)||(19978025-19978096)
chr2 (211-282)||(22878176-22878247)
chr2 (228-282)||(15370244-15370298)
chr2 (191-260)||(787390-787459)
chr2 (248-284)||(1633419-1633455)
chr2 (198-270)||(14316078-14316150)
chr2 (198-246)||(29429714-29429762)
chr2 (203-282)||(36677722-36677802)
chr2 (191-270)||(757507-757586)
chr2 (219-282)||(7103394-7103457)
chr2 (192-243)||(18884926-18884977)
chr2 (192-271)||(29430817-29430896)
chr2 (191-278)||(32821867-32821954)
chr2 (198-283)||(33319736-33319818)
chr2 (232-271)||(42409220-42409259)
chr2 (228-282)||(6547984-6548038)
chr2 (196-278)||(8820217-8820299)
chr2 (232-282)||(41170709-41170759)
chr2 (203-280)||(19243603-19243680)
chr2 (199-272)||(25609862-25609935)
chr2 (201-278)||(25800594-25800671)
chr2 (216-261)||(38239554-38239599)
chr2 (197-282)||(40943977-40944062)
chr2 (191-284)||(43985267-43985360)
chr2 (191-267)||(9878618-9878694)
chr2 (191-271)||(32614880-32614960)
chr2 (158-243)||(34651996-34652077)
chr2 (236-288)||(37419582-37419634)
chr2 (196-284)||(40158781-40158869)
chr2 (228-284)||(42852621-42852677)
chr2 (92-128)||(43141862-43141898)
[»] chr6 (37 HSPs)
chr6 (227-279)||(3738195-3738247)
chr6 (195-282)||(2460072-2460159)
chr6 (193-287)||(8420112-8420207)
chr6 (158-273)||(2455839-2455950)
chr6 (191-273)||(32917255-32917337)
chr6 (158-282)||(7148695-7148815)
chr6 (191-269)||(9041394-9041472)
chr6 (191-261)||(32976036-32976106)
chr6 (191-263)||(3738127-3738199)
chr6 (232-284)||(12111066-12111118)
chr6 (191-282)||(4325226-4325317)
chr6 (228-283)||(26559159-26559214)
chr6 (216-282)||(7901752-7901818)
chr6 (195-273)||(33911212-33911290)
chr6 (217-273)||(7351601-7351657)
chr6 (191-271)||(27857416-27857496)
chr6 (197-273)||(30865547-30865623)
chr6 (191-271)||(32848528-32848608)
chr6 (191-238)||(2767714-2767761)
chr6 (192-243)||(3289365-3289416)
chr6 (191-246)||(4331029-4331084)
chr6 (191-282)||(8010415-8010506)
chr6 (217-272)||(29052850-29052905)
chr6 (196-271)||(33887893-33887968)
chr6 (195-237)||(2027764-2027806)
chr6 (197-271)||(10476054-10476128)
chr6 (191-241)||(34939802-34939852)
chr6 (203-282)||(3287949-3288025)
chr6 (170-244)||(3775087-3775157)
chr6 (218-259)||(10353705-10353746)
chr6 (195-284)||(24973946-24974035)
chr6 (191-272)||(29040093-29040174)
chr6 (219-272)||(31774463-31774516)
chr6 (211-243)||(2795339-2795371)
chr6 (194-246)||(5731630-5731682)
chr6 (217-273)||(6742895-6742951)
chr6 (191-283)||(31583737-31583828)
[»] chr3 (50 HSPs)
chr3 (178-282)||(25459551-25459654)
chr3 (191-282)||(21872216-21872307)
chr3 (191-272)||(37273192-37273273)
chr3 (158-282)||(11253530-11253650)
chr3 (169-261)||(24624250-24624338)
chr3 (191-282)||(44014719-44014810)
chr3 (196-282)||(3775772-3775858)
chr3 (216-282)||(45590734-45590800)
chr3 (191-272)||(24603683-24603764)
chr3 (168-278)||(52323819-52323925)
chr3 (191-243)||(659820-659872)
chr3 (216-272)||(27795944-27796000)
chr3 (191-279)||(33965412-33965500)
chr3 (215-279)||(41644369-41644433)
chr3 (196-284)||(49465584-49465672)
chr3 (191-255)||(49772616-49772680)
chr3 (191-257)||(42530315-42530384)
chr3 (198-292)||(22667468-22667562)
chr3 (198-292)||(22724107-22724201)
chr3 (193-266)||(8933847-8933920)
chr3 (216-273)||(13709766-13709823)
chr3 (191-263)||(32103457-32103529)
chr3 (195-271)||(49605783-49605859)
chr3 (196-271)||(10540425-10540500)
chr3 (158-282)||(20192527-20192647)
chr3 (191-282)||(22232891-22232981)
chr3 (211-282)||(42809371-42809442)
chr3 (231-282)||(45083191-45083242)
chr3 (191-282)||(45541629-45541720)
chr3 (192-271)||(49465869-49465947)
chr3 (203-246)||(52583621-52583664)
chr3 (196-282)||(2100100-2100186)
chr3 (198-284)||(20194952-20195038)
chr3 (211-285)||(27294424-27294498)
chr3 (228-282)||(36189724-36189778)
chr3 (222-272)||(41057244-41057294)
chr3 (236-282)||(44240200-44240246)
chr3 (216-246)||(46759062-46759092)
chr3 (239-284)||(19679247-19679292)
chr3 (89-122)||(21865564-21865597)
chr3 (211-288)||(24158431-24158508)
chr3 (195-244)||(30923858-30923906)
chr3 (222-282)||(584136-584195)
chr3 (219-282)||(1288770-1288831)
chr3 (216-294)||(12923250-12923325)
chr3 (191-271)||(31010460-31010540)
chr3 (158-190)||(32064468-32064500)
chr3 (228-284)||(41848635-41848691)
chr3 (191-271)||(43875708-43875788)
chr3 (218-282)||(51929826-51929890)
[»] scaffold0024 (1 HSPs)
scaffold0024 (197-243)||(27640-27686)
[»] scaffold0141 (1 HSPs)
scaffold0141 (211-284)||(9697-9770)
[»] scaffold0053 (1 HSPs)
scaffold0053 (191-262)||(20223-20294)
[»] scaffold0110 (1 HSPs)
scaffold0110 (191-273)||(33843-33924)


Alignment Details
Target: chr4 (Bit Score: 327; Significance: 0; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 20 - 354
Target Start/End: Original strand, 25896671 - 25897005
Alignment:
Q  20 cacgcttatcatatagtaagtgattacgtataagctatttctataacaaatacaataaggcccaaaaaatttcatataagctataagatgttttgataag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25896671 cacgcttatcatatagtaagtgattacgtataagctatttctataacaaatacaataaggccaaaaaaatttcatataagctataagatgttttgataag 25896770  T
Q  120 ctaccctgagcttatgctggctgttagttcatcccggtgagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25896771 ctaccctgagcttatgctggctgttagttcatcccggtgagcttaggaaaataagctgaaaacagtttatgtatggacatgtcataagctatttctataa 25896870  T
Q  220 gctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgccattagttaaatcaccaccaaagagtgtaacc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25896871 gctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgccattagttaaatcaccaccaaagagtgtaacc 25896970  T
Q  320 tttctattacctgaaccaatgaaccagctctctgc 354  Q
    |||||||||||||||||||||||||||||||||||    
T  25896971 tttctattacctgaaccaatgaaccagctctctgc 25897005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 11264330 - 11264450
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||| | |||||||||||||||||||||||    ||||||||||||| |  ||||||| ||||||| |||||||||||||  || | ||||||||||    
T  11264330 gagcttatggaaataagttgaaaacagtttatg----gacatgtcataagttgattctatatgctctcccaaacagtctcacagatgtttatgctagtag 11264425  T
Q  258 ataaactcaaataagtgaatccaaa 282  Q
    ||| |||||||||||  ||||||||    
T  11264426 atagactcaaataagccaatccaaa 11264450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 6987782 - 6987656
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||| | |||||||||||||| ||||||||    ||||||||||||| | | || ||||||||||| ||||||||||||||   || ||||||||||    
T  6987782 gagcttatggaaataagttgaaaatagtttatg----gacatgtcataagttgtatccataagctctcccaaacagtctcacaaacacttatgctagtag 6987687  T
Q  258 ataaactcaaataagtgaatccaaatatgcc 288  Q
    |||||||||| ||||| ||| |||| |||||    
T  6987686 ataaactcaattaagtcaatacaaacatgcc 6987656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 2977984 - 2977897
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||| |||||| ||||| ||||||||| |||||||||||||| ||||| |||| | ||||| | ||||||||||| ||||||||    
T  2977984 gacatgtcctaagctgtttctgtaagctctcttaaacagtctcacacgtgcttatgccactagatcagctcaaataagttaatccaaa 2977897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 27123360 - 27123273
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||| | |||| ||||||||||  |||||||||||||||| || ||||||||  |||| ||||||||||| ||||||||    
T  27123360 gacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataagttaatccaaa 27123273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 7368061 - 7367975
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||| |||  || |||||||| ||||||||||||||| | | ||||  |||||||||||||||||||| ||||||||    
T  7368061 acatgtcataagctgttttcatgagctctcccaaacagtctcacaagcgtttatgcctgtagataaactcaaataagtcaatccaaa 7367975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 37636187 - 37636105
Alignment:
Q  202 cataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||| ||||||||| |||||| ||||||| | ||| ||||| ||| |||||||||||||||||||| | ||||||||||    
T  37636187 cataagctgtttctataaactctcccaaacagttttacaggtgcttatgttagtagataaactcaaataaatcaatccaaata 37636105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 25487544 - 25487474
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatg 286  Q
    ||||||||| | ||||| ||| ||||||||| |||||| ||||||||||||||||||| |||| |||||||    
T  25487544 ataagctcttccaaacaatcttacaagtgcttatgctaatagataaactcaaataagttaatcaaaatatg 25487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 46797078 - 46797152
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||| |||||||||| ||||||| || |||||||||||||||||||| || | |||| |||| |||||||||    
T  46797078 catgtcacaagctatttcaataagctttcataaacagtctcacaagtgcttatacaagtaaataagctcaaataa 46797152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 52388285 - 52388363
Alignment:
Q  204 taagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| ||||||||||| ||||| | ||||| ||||| |||| |||||||  |||||||||||| ||||||||    
T  52388285 taagctatttccataagctctcccaaacaatttcacatgtgcttatgccagtagatggactcaaataagtcaatccaaa 52388363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 3639180 - 3639083
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgcc 288  Q
    ||||||| ||||||||||| ||||||| |||||| | ||| | ||||||| ||||| |||   |||||||| ||||||||||  ||||||||||||||    
T  3639180 tatggacttgtcataagctgtttctatcagctcttccaaataatctcacaggtgcttatgtcggtagataagctcaaataagcaaatccaaatatgcc 3639083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 28615400 - 28615483
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||| |||| |||  ||||| ||||| ||||| ||||||||||| | ||||||||||||||||| |||||||| ||||||||    
T  28615400 atgtcattagctgttttcataagttctcc-aaacaatctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaa 28615483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 32421029 - 32420977
Alignment:
Q  232 agtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||||| |||||||||| ||| ||||||||||| ||||||||||    
T  32421029 agtctcacaagtgcttatgctagtaggtaagctcaaataagtcaatccaaata 32420977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 21043239 - 21043157
Alignment:
Q  199 tgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| |||| |||| |||||| ||||||||||||||||  | ||||  |||| ||||||||||||||| ||||||||    
T  21043239 tgtcataagctgtttccataacctctcccaaacagtctcacaagt-ttcatgcctgtaggtaaactcaaataagtcaatccaaa 21043157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 35743352 - 35743419
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaat 283  Q
    ||||||||| |||||||||||||||| |||| ||  |||||||||| ||||||||||| |||| ||||    
T  35743352 ataagctcttctaaacagtctcacaaatgcttatattagtagataatctcaaataagtcaatctaaat 35743419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 41097268 - 41097213
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    |||||||||||||| || | ||||||||||||||||  ||||||||||||||||||    
T  41097268 tatggacatgtcattagttgtttctataagctctcccgaacagtctcacaagtgct 41097213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 21157833 - 21157907
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||| ||||| |||||||| | ||||||||| ||||||||| |||  ||||||| | ||||||||||    
T  21157833 atgtcataagctgtttctgtaagctcttccaaacagtcttacaagtgcttatgtcagtagatgagctcaaataag 21157907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 50746074 - 50746124
Alignment:
Q  232 agtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||| ||||    
T  50746074 agtctcacaagtgcttatgcaagtagataaactcaaataagtcaatacaaa 50746124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 19304984 - 19305077
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||||||||| |||| | ||  ||||| | ||| |||||||| |||| |||  | ||||||| ||||||||||| ||||||||||    
T  19304984 tatggacatgtcataagctgtttccacaaattctcccacacaatctcacaaatgcttatgtcaatagataatctcaaataagtcaatccaaata 19305077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 22796751 - 22796804
Alignment:
Q  229 aacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||| || |||| |||||||||||||||||||||||| | ||||||||    
T  22796751 aacagtctcataaatgcttatgctagtagataaactcaaataaatcaatccaaa 22796804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 18628540 - 18628472
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||| ||||||||||||||||| | |||  ||||||||| |||||||| || |||| |||||    
T  18628540 ataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaatacgtcaatctaaata 18628472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 19394775 - 19394695
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||| |||||| ||||| | ||||||||||||||   ||||||||||||||||| |  |||| |||| |||||||||||||    
T  19394775 tatgtacatgtaataagttgtttctataagctctggcaaacagtctcacaagtgtttttgctcgtagttaaactcaaataa 19394695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 50298574 - 50298653
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||| |||||||||||||||||| |||||| | | | ||||||||||||||||||| |||  ||||||||| || ||||||    
T  50298574 tatgaacatgtcataagctattt-tataagtttttccaaacagtctcacaagtgcttatgtcagtagataagctaaaataa 50298653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 3549565 - 3549486
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||||  ||||||  ||||| ||||  ||||||||||| ||||||| |||| | |||||||||| |||||||    
T  3549565 tggacatgtcatacactattttcataagttctctcaaacagtctcataagtgcttatgccaatagataaactaaaataag 3549486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 36462085 - 36462168
Alignment:
Q  201 tcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||| | |||||||||  || ||||||||||| |||| || | | || ||||| |||||||||| ||||||||||    
T  36462085 tcataagctatttttttaagctctctcaatcagtctcacaattgcttataccaatatataaattcaaataagttaatccaaata 36462168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 1017106 - 1017176
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaa 281  Q
    |||||||||| ||| | ||||||||||||||||| | |||  ||||||| | ||||||||||| |||||||    
T  1017106 tttctataagttcttccaaacagtctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 2811551 - 2811625
Alignment:
Q  213 tctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgc 287  Q
    ||||||| |||||  ||||||||||| || |||| |||| ||||||||| ||||||||||| ||| |||| ||||    
T  2811551 tctataatctctctcaaacagtctcataaatgcttatgccagtagataacctcaaataagtcaattcaaacatgc 2811625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 9841054 - 9841092
Alignment:
Q  89 tttcatataagctataagatgttttgataagctaccctg 127  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  9841054 tttcatataagctataagatgttttcataagctatcctg 9841092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 19429457 - 19429391
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| ||||||||||||||||| | || | |||| |||| ||||||||||  ||||||||    
T  19429457 ataagctctcccaaacagtctcacaagtgtttataccagtaaataagctcaaataagccaatccaaa 19429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 27725272 - 27725354
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||||||||| |||||| ||||||||||  ||||||||  | | ||||| ||   ||||||||| |||||||||||    
T  27725272 tatggacatgtcataagttatttccataagctctctcaaacagtcgtatatgtgcttatctcagtagataagctcaaataagt 27725354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 36577549 - 36577463
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||| | ||| | |||| ||||| ||||||||||||||||||| ||   | |||| ||| |||||||||| ||||||||    
T  36577549 acatgtcataagttgtttttgtaagttctccgaaacagtctcacaagtgcttatctcaatagacaaattcaaataagtcaatccaaa 36577463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 56186869 - 56186819
Alignment:
Q  232 agtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||| | ||| |||||||||||||| ||||||| ||||||||    
T  56186869 agtctcacaagtgtttatgttagtagataaactcgaataagttaatccaaa 56186819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 19429524 - 19429471
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtg 244  Q
    ||||||||||||||||| | | || ||||||||||| |||||||||||| ||||    
T  19429524 tatggacatgtcataagttttctccataagctctcccaaacagtctcacgagtg 19429471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 22662213 - 22662172
Alignment:
Q  241 agtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||| ||| |||||||||||||||||||||| ||||||||    
T  22662213 agtgcttatgttagtagataaactcaaataagtcaatccaaa 22662172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 22666692 - 22666651
Alignment:
Q  241 agtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||| ||| |||||||||||||||||||||| ||||||||    
T  22666692 agtgcttatgttagtagataaactcaaataagtcaatccaaa 22666651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 25434420 - 25434343
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||| ||||||| |||   |||||||||||||||||| ||||||||||| ||  ||| | |||| ||||||||||    
T  25434420 gacatgttataagctgttttcctaagctctcctaaacagtttcacaagtgcttattttagcatataagctcaaataag 25434343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 284
Target Start/End: Complemental strand, 29601016 - 29600943
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||| ||||||| ||| || ||||||| |||| || |||| | |||| ||||||||||| ||||||||||    
T  29601016 tttctatacgctctcccaaagaggctcacaaatgcttatactagcaaataagctcaaataagtaaatccaaata 29600943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 41701462 - 41701378
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaa 281  Q
    ||||||||| ||||||||| || | |||| | || ||||||||| |||||| ||||| | |||||||| ||||||||| |||||||    
T  41701462 acatgtcatgagctatttccattaactcttcgaa-cagtctcactagtgcttatgctggcagataaacacaaataagtcaatccaa 41701378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 8074824 - 8074876
Alignment:
Q  194 ggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    |||||| |||| |||| |||||||||||||||  |||||||||||||| ||||    
T  8074824 ggacatttcattagctgtttctataagctctctcaaacagtctcacaaatgct 8074876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 9680904 - 9680984
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    |||| |||| |||||||||||| ||||||||| | | |||||||  |||||| | ||||  |||||||| |||||||||||    
T  9680904 tggatatgttataagctatttcaataagctcttcaagacagtcttgcaagtgtttatgcatgtagataagctcaaataagt 9680984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 287
Target Start/End: Original strand, 10172120 - 10172216
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgc 287  Q
    |||| |||||||| ||||| |||| ||||||| |   ||||||| ||||||||||| ||||   ||||||| ||||||||| | |||||||| ||||    
T  10172120 tatgaacatgtcacaagctgtttccataagctatatcaaacagtttcacaagtgcttatgcatatagataagctcaaataaatcaatccaaacatgc 10172216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 14172041 - 14172121
Alignment:
Q  203 ataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaat 283  Q
    ||||||| |||| ||||||||| | |||||  |||| ||||| |||||  ||||||||| ||||||||||| ||| |||||    
T  14172041 ataagctgtttccataagctcttccaaacatactcagaagtgttaatgaaagtagataagctcaaataagtcaattcaaat 14172121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 25434491 - 25434443
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    |||| ||||||| |||  |||||||||||||||||||||||| ||||||    
T  25434491 atgttataagctgttttcataagctctcctaaacagtctcactagtgct 25434443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 287
Target Start/End: Complemental strand, 29467636 - 29467540
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgc 287  Q
    ||||||||||||||||||  |||||||||||| | | || || ||||||||||  | || | ||||||||||||  ||||||  |||||||| ||||    
T  29467636 tatggacatgtcataagccgtttctataagctttaccaagcaatctcacaagtatttataccagtagataaactacaataagctaatccaaagatgc 29467540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 44638181 - 44638141
Alignment:
Q  248 atgctagtagataaactcaaataagtgaatccaaatatgcc 288  Q
    ||||||||| |||||||||||||||| |||||||| |||||    
T  44638181 atgctagtaaataaactcaaataagtcaatccaaacatgcc 44638141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 51555757 - 51555705
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaa 268  Q
    ||||||||| ||||||| ||||| ||||||| |||  ||||||||||||||||    
T  51555757 ataagctcttctaaacaatctcataagtgcttatgtgagtagataaactcaaa 51555705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 28467496 - 28467582
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||| |||||| |||| |||||| ||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  28467496 acatgtcataagttatttccataatctctcccaaatagtctcataagtgctaatgctagtaaataaactcaaataagtcaatccaaa 28467582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 32515449 - 32515374
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaata 270  Q
    ||||||||||| ||| |||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  32515449 gacatgtcatacgctgtttccataagctctcccaaacagtctcacaagtgcttatgttagtagataaactcaaata 32515374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 4549549 - 4549462
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||| | |||||||||||||||| ||||||||||| || |||| |||| ||||||||| ||||||||||  ||||||||    
T  4549549 gacatgtcataagttgtttctataagctctcccaaacagtctcagaaatgcttatgccagtagataatctcaaataagccaatccaaa 4549462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 272
Target Start/End: Original strand, 15709912 - 15709988
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||||||||||  |||| ||||| ||||||||||| ||||||| |||||||||||||| ||||| ||||    
T  15709912 acatgtcataagctatttccgtaagttctcccaaacagtctcaaaagtgcttatgctagtagataacctcaagtaag 15709988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 281
Target Start/End: Complemental strand, 10199420 - 10199330
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaa 281  Q
    |||| ||||||||||||||||||  || || ||||| ||| ||| ||||||||||| ||| |||||||||| ||||||||||| |||||||    
T  10199420 tatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgcttatgttagtagataagctcaaataagtcaatccaa 10199330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 199 - 288
Target Start/End: Original strand, 14559038 - 14559127
Alignment:
Q  199 tgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgcc 288  Q
    ||||||||||| ||||||| |||||||||||||| |||| ||| || | |||  ||||||||| ||||||||||  ||||||||||||||    
T  14559038 tgtcataagctctttctattagctctcctaaacaatctcgcaaatgtttatgtcagtagataacctcaaataagctaatccaaatatgcc 14559127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 29723528 - 29723637
Alignment:
Q  168 aaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaa 267  Q
    |||||||||||||||||||||||    ||||||||||||||| |||| || || |||   |||| || ||||||||||| ||||||||| |||| |||||    
T  29723528 aaataagttgaaaacagtttatg----gacatgtcataagctgtttccattagttctttcaaactgtatcacaagtgcttatgctagtaaataagctcaa 29723623  T
Q  268 ataagtgaatccaa 281  Q
    || ||| |||||||    
T  29723624 attagtcaatccaa 29723637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 6659763 - 6659829
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||| ||| ||| ||||||||||||||| |||||||||||||| || |||||||| ||||||||    
T  6659763 ataagctatcccaaatagtctcacaagtgcttatgctagtagataagctaaaataagtcaatccaaa 6659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 15579540 - 15579622
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||||||||| | |||| | ||||||||| |||||||||  ||||| || ||||||||||||||| |||| |||||    
T  15579540 tatggacatgtcataagttgtttccacaagctctcccaaacagtcttgcaagttcttatgctagtagataaattcaattaagt 15579622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 23373323 - 23373270
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    ||||||||||||||| | |||||||||||||||| ||||| |||||||||||||    
T  23373323 tggacatgtcataagttgtttctataagctctcccaaacaatctcacaagtgct 23373270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 30257741 - 30257834
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaag-tgctaatgctagtagataaactcaaataagtgaatccaaat 283  Q
    |||| |||||||||||   |||| |||||||||||||||| ||||||||||  || | |||  ||||||||||||||||||||| |||||||||    
T  30257741 tatgaacatgtcataaaagatttttataagctctcctaaatagtctcacaaaatgtttatgtcagtagataaactcaaataagtaaatccaaat 30257834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 31517781 - 31517671
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||| ||||||||| ||||||||| ||||| |    |||||||| || | |||  ||||| ||||| ||||||||||||||||||| |||| ||||     
T  31517781 gagcttatgaaaataagctgaaaacagcttatgaa----catgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaa 31517686  T
Q  258 ataaactcaaataag 272  Q
    |||| ||||||||||    
T  31517685 ataagctcaaataag 31517671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 9507314 - 9507370
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||||||| |||||||||||||| |||  |||||||||||||| ||||||||||    
T  9507314 ataagctctcccaaacagtctcacaaatgcctatgctagtagataagctcaaataag 9507370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 5157140 - 5157223
Alignment:
Q  201 tcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||| | |||||||||||||||| ||||||| ||||||||| | |||   ||||||||  |||||||||| ||||||||||    
T  5157140 tcataagttgtttctataagctctcccaaacagtttcacaagtgtttatgtccgtagataagttcaaataagtcaatccaaata 5157223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 6292522 - 6292641
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||| ||||||||| ||||||||| ||||| |    ||||||||||||| ||| || ||  ||||| ||||| ||||| ||||||| |||  |||||    
T  6292522 gagcttatgaaaataagctgaaaacagcttatgaa----catgtcataagctgttt-taaaaattctcccaaacaatctcaaaagtgcttatgtcagtag 6292616  T
Q  258 ataaactcaaataagtgaatccaaa 282  Q
    |||| ||||||||||| ||||||||    
T  6292617 ataagctcaaataagtcaatccaaa 6292641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 11695891 - 11696011
Alignment:
Q  159 agcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtg-ctaatgctagtag 257  Q
    |||||| ||||||||||||||||||| |    |||||||||||||||| || |||| ||| ||| ||| ||||| ||||||| | | || |||||| ||     
T  11695891 agcttatgaaaataagttgaaaacagct----tatggacatgtcataaactgtttccatatgctttcccaaacaatctcacaggagtcttatgctaataa 11695986  T
Q  258 ataaactcaaataagtgaatccaaa 282  Q
    |||| ||||||||||| ||||||||    
T  11695987 ataagctcaaataagtcaatccaaa 11696011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 12763383 - 12763458
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaa 268  Q
    ||||||||||||||||| |||   |||| ||||| ||||||||| |||| |||| |||||| ||||||||||||||    
T  12763383 tggacatgtcataagctgttttcgtaagttctccaaaacagtcttacaaatgcttatgctaatagataaactcaaa 12763458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 21012852 - 21012930
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||||||| |||||| ||| |||   | |||||| ||||| |||  ||||||||||||||||||||||||||    
T  21012852 gacatgtcataagctgtttctacaagttctatcatacagtcacacaaatgcacatgctagtagataaactcaaataagt 21012930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 29045896 - 29045854
Alignment:
Q  240 aagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  29045896 aagtgctcatgctagtagataaactcaaataagtcaatccaaa 29045854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 30815691 - 30815585
Alignment:
Q  161 cttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagata 260  Q
    |||| ||||||||| |||||||| |||||| |    ||||||||||||| ||| |||||||||||| ||||| | || | ||| || |||||||||||||    
T  30815691 cttatgaaaataagctgaaaacattttatgaa----catgtcataagctgtttatataagctctcc-aaacactatcgctagttcttatgctagtagata 30815597  T
Q  261 aactcaaataag 272  Q
    | ||||||||||    
T  30815596 acctcaaataag 30815585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 32548619 - 32548550
Alignment:
Q  214 ctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||||||| ||||||||||| ||||||  ||| |||||| |||||||| ||||||| ||||||||||    
T  32548619 ctataagctctcttaaacagtctcgcaagtgtcaatactagtaaataaactc-aataagttaatccaaata 32548550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 33723389 - 33723303
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||| |||| |||| ||||| | ||| || |||||||||||||| | ||| ||||||||||  |||||||||| ||||||||    
T  33723389 acatgtcatgagctgtttccataagttttcccaagcagtctcacaagtgtttatggtagtagataagttcaaataagtcaatccaaa 33723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 44422757 - 44422827
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataa 261  Q
    |||||||||||||||||||||||  ||||||||||| | ||||||||| ||||| | || | |||||||||    
T  44422757 tatggacatgtcataagctattttcataagctctcccagacagtctcaaaagtgtttatcccagtagataa 44422827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 45327638 - 45327720
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||||||||| | |||| |||||||| || ||  |||||||||||||||  ||| ||||||||| ||| |||||||    
T  45327638 tatggacatgtcataagttgtttccataagctcccccaactagtctcacaagtgctcgtgccagtagataagctccaataagt 45327720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 51256814 - 51256753
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||||||||| |||||||| |||||  || ||||||||||||||| ||||||||||    
T  51256814 tttctataagctctcctgaacagtct-acaaggacttatgctagtagataaattcaaataagt 51256753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 1662631 - 1662712
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||||||||||||| | ||||  |||||||||  ||| |||||| || || || |||||||||||||| ||||||||||    
T  1662631 tatggacatgtcataagttgtttccgtaagctctcgcaaatagtctcgcatgtacttatgctagtagataagctcaaataag 1662712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 284
Target Start/End: Complemental strand, 9602698 - 9602573
Alignment:
Q  161 cttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctccta-------aacagtctcacaagtgctaatgcta 253  Q
    |||| ||||||||||||||||||| ||||      ||||||||||||||||||| |||| |||||| |       || ||||||||||||||| | | ||    
T  9602698 cttatgaaaataagttgaaaacagattatc-----acatgtcataagctatttccataaactctcccatgtcccaaatagtctcacaagtgcttaagtta 9602604  T
Q  254 gtagataaactcaaataagtgaatccaaata 284  Q
    |||||||| |||| |||||| ||||||||||    
T  9602603 gtagataagctcagataagtcaatccaaata 9602573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 14737738 - 14737658
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||||||| ||||| |||||  | ||| | ||| ||||||||||||||||||| || |||||| |||| |||||||||    
T  14737738 tatggacatgttataagttattttcacaagttttcccaaacagtctcacaagtgcttattctagtaaataagctcaaataa 14737658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 23407489 - 23407537
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcac 239  Q
    |||||||||||||||||||||||| ||||||||||  | ||||||||||    
T  23407489 tatggacatgtcataagctatttcaataagctctctcagacagtctcac 23407537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 49692064 - 49692012
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagt 243  Q
    |||||||||||||||||||||||  ||||| ||||  ||||||||||||||||    
T  49692064 tatggacatgtcataagctattttcataagttctctcaaacagtctcacaagt 49692012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 51929467 - 51929383
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||| |||  ||||| |||| |||||||| ||||| ||||| |||  ||||||||| |||||| |||| ||||||||    
T  51929467 atgtcataagctgttttcataagttctcttaaacagtgtcacaggtgcttatgtcagtagataagctcaaaaaagtcaatccaaa 51929383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 2035443 - 2035352
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||| ||||||||||||||||  ||||| |||| | ||||||||| ||| |||| |||| |||| |||| || |||||| | ||||||||    
T  2035443 tatggatatgtcataagctattttcataagttctcttgaacagtctctcaaatgcttatgccagtatataatcttaaataattcaatccaaa 2035352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 3597293 - 3597202
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||| ||||||||||| ||||| ||| | |||| | ||||||||||||||||| | ||   | ||||||| ||||||||||| ||||||||    
T  3597293 tatggccatgtcataagttatttttatcaactcttccaaacagtctcacaagtggttatatcattagataacctcaaataagtcaatccaaa 3597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 28935888 - 28935833
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    |||||||||||||||| ||   |||||||||||||| |||||||||||||| ||||    
T  28935888 tatggacatgtcataaactgactctataagctctcccaaacagtctcacaaatgct 28935833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 36070264 - 36070319
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||| ||||||||||||||||||||||||| |||| || ||||||  ||||||||    
T  36070264 ataagttctcctaaacagtctcacaagtgcttatgccagaagataatatcaaataa 36070319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 40485780 - 40485717
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagat 259  Q
    |||||||||||| | |||| ||||| ||||| ||||||||||||||||||| |||  |||||||    
T  40485780 acatgtcataagatgtttcaataagttctcccaaacagtctcacaagtgcttatgtaagtagat 40485717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 41638295 - 41638220
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgccatt 291  Q
    |||| |||||| |||||||||||||| |||| |||| ||||||||  ||||| ||||  |||||||| ||||||||    
T  41638295 ataatctctcccaaacagtctcacaaatgcttatgccagtagataggctcaattaagacaatccaaacatgccatt 41638220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 44032011 - 44031921
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||| ||||  ||  ||||||||||||| ||||||| ||||||||| |||  |||||| ||||| |||| ||| ||||||||    
T  44032011 tatggacatgtcattagctgcttacataagctctcctagacagtctaacaagtgcttatgacagtaga-aaacttaaattagttaatccaaa 44031921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 6231847 - 6231748
Alignment:
Q  168 aaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaa 267  Q
    ||||||| |||||||||||||||    |||||||||| || | |||| || |||| |||  |||| |||||||| || | |||||||||||||| |||||    
T  6231847 aaataagctgaaaacagtttatg----gacatgtcattagttgtttccatgagctatccagaacaatctcacaaatgtttatgctagtagataacctcaa 6231752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 15566652 - 15566602
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagt 243  Q
    ||||||| ||||||||| |||||||||||||||  ||| ||||||||||||    
T  15566652 tggacatttcataagctgtttctataagctctcacaaatagtctcacaagt 15566602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 16322913 - 16322987
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||| |||||| | |||| |||| |||||| ||||||| |||||| | |||| ||||||||| ||||||||||||    
T  16322913 catgacataagttgtttcgataatctctccaaaacagtttcacaaattctaaggctagtagagaaactcaaataa 16322987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 21002250 - 21002304
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||| || |||| ||||||||| ||||||||||  ||||||||    
T  21002250 aaacagtctcacaagttcttatgcaagtagataagctcaaataagccaatccaaa 21002304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 24460376 - 24460322
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||||||||| |||  |||||||||  |||||||||| ||||||||    
T  24460376 aaacagtctcacaagtgctcatgtcagtagataagttcaaataagtcaatccaaa 24460322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 25719734 - 25719820
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||| ||||||||||||  || |||||||| ||| ||||||| || |||| | || |||| |||||||||||||| | ||||||||    
T  25719734 acatgccataagctattttcatcagctctcccaaagagtctcataaatgcttaagccagtaaataaactcaaataaatcaatccaaa 25719820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 282
Target Start/End: Complemental strand, 30014034 - 30014000
Alignment:
Q  248 atgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||||||||||||| ||||||||    
T  30014034 atgctagtagataaactcaaataagtcaatccaaa 30014000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 37241803 - 37241742
Alignment:
Q  220 gctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||| |||| |||||||| |||| ||||||||| || |||||||| ||||||||    
T  37241803 gctctcctaaacaatctcgcaagtgcttatgc-agtagataagcttaaataagtcaatccaaa 37241742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 38170702 - 38170632
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataa 261  Q
    |||| |||||||||||||| |||  ||||||||||| || |||||||||||||| | |||| |||| ||||    
T  38170702 tatgaacatgtcataagctgttttcataagctctcccaagcagtctcacaagtgttcatgccagtatataa 38170632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 1565120 - 1565067
Alignment:
Q  229 aacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| |||||||||||||  ||||||||||||| |||||| |||| ||||||||    
T  1565120 aacactctcacaagtgcttgtgctagtagataatctcaaaaaagttaatccaaa 1565067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 2832075 - 2832120
Alignment:
Q  236 tcacaagtgctaatgctagtagataaactcaaataagtgaatccaa 281  Q
    ||||||||||| |||||||||||||| ||||||||||  |||||||    
T  2832075 tcacaagtgcttatgctagtagataagctcaaataagctaatccaa 2832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 6659502 - 6659535
Alignment:
Q  89 tttcatataagctataagatgttttgataagcta 122  Q
    ||||||||||||||||||||||||| ||||||||    
T  6659502 tttcatataagctataagatgttttcataagcta 6659535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 15581316 - 15581393
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||||||||| | |||| || |||||| | ||||| ||||||||||||| |||  ||||||||| || |||||||    
T  15581316 gacatgtcataagttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagtagataagctaaaataag 15581393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 33976243 - 33976327
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||| ||| ||||||||||||||  | |||| |||||||||||||| |||  | || |||| ||||||||||| ||||||||    
T  33976243 catgtcattagc-atttctataagctcaaccaaactgtctcacaagtgctgatgtcattaaataagctcaaataagtcaatccaaa 33976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 43420316 - 43420397
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||| |||||||||||||| |||| ||||| ||||  || |||||||||||||| | |||   |||||||| ||||||||||    
T  43420316 tatgaacatgtcataagctgtttccataagatctcacaagcagtctcacaagtgtttatgtctgtagataagctcaaataag 43420397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 44936597 - 44936536
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||| ||||  |||| ||||||||| |||| |||| ||| ||||||||||||||||    
T  44936597 tttctataagttctcgcaaacggtctcacaattgctcatgccagtcgataaactcaaataag 44936536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 172538 - 172494
Alignment:
Q  238 acaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||| | || ||||||||||||||||||||| ||||||||    
T  172538 acaagtgcttaggcaagtagataaactcaaataagtcaatccaaa 172494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 2522696 - 2522744
Alignment:
Q  233 gtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaa 281  Q
    |||| ||||||| | |||| ||||||||||||||||||||| |||||||    
T  2522696 gtcttacaagtgtttatgccagtagataaactcaaataagtcaatccaa 2522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 3215817 - 3215873
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||||||||| |||| ||| || || |||||||||||||||  ||||||||||    
T  3215817 aaacagtctcacaaatgcttatgttaataaataaactcaaataagataatccaaata 3215873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 6976982 - 6977062
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||| |||||||||||| | |||| || |||||||  |||||| ||||||||| || |||||| || |||| |||||||||    
T  6976982 tatgaacatgtcataagttgtttccattagctctcgcaaacagcctcacaagttctcatgctaataaataagctcaaataa 6977062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 23370278 - 23370238
Alignment:
Q  227 taaacagtctcacaagtgctaatgctagtagataaactcaa 267  Q
    |||||||||||||||||||| ||||| ||| ||||||||||    
T  23370278 taaacagtctcacaagtgcttatgcttgtacataaactcaa 23370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 28467316 - 28467268
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtg 244  Q
    ||||| ||| ||||||||| ||||||||||| ||||||| |||||||||    
T  28467316 acatgccatgagctatttccataagctctcccaaacagtttcacaagtg 28467268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 32859918 - 32859866
Alignment:
Q  232 agtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||||||| || |||||||||||||| ||||| ||||| ||| ||||||    
T  32859918 agtctcacaagtacttatgctagtagataagctcaagtaagtcaattcaaata 32859866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 32958714 - 32958782
Alignment:
Q  210 atttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatc 278  Q
    |||| |||||||||||| ||| |  |||||||||||| |||  ||||||||| ||||||||||| ||||    
T  32958714 atttttataagctctccaaaataacctcacaagtgcttatgacagtagataagctcaaataagtcaatc 32958782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 34668740 - 34668807
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||| | |||||| |||||||||||| |||  |||| |||||||||||||||  ||||||||||    
T  34668740 ataagctcttccaaacag-ctcacaagtgctcatgtcagtacataaactcaaataagccaatccaaata 34668807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 44115914 - 44115826
Alignment:
Q  194 ggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| |||  ||| || ||||||||  |||| ||||||||||| || | |  ||||| ||||||||||||||| ||||||||    
T  44115914 ggacatgtcattagccgtttttacaagctctctcaaactgtctcacaagtacttaagtgagtaggtaaactcaaataagtcaatccaaa 44115826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 44928197 - 44928125
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaat 269  Q
    ||||||||||| | |||||||||| ||| | ||||| ||| ||||||||| || |||||| |||| |||||||    
T  44928197 catgtcataagttgtttctataagttcttccaaacaatcttacaagtgcttatactagtaaataagctcaaat 44928125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 39542308 - 39542221
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||| |||||| ||||||||||  |||| ||||| |||||||| |||||||||||||||||||||||||| || |||||    
T  39542308 gacatgtcataagttatttccataagctctctaaaactgtctcgcaagtgcttatgctagtagataaactcaaataagtcaacccaaa 39542221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 12234897 - 12234808
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||| | |||||||||||| | | || |||||||||| |||||||||| ||||||||| ||||| ||||| ||||||||||    
T  12234897 gacatgtcataagttgtttctataagctattccaagcagtctcacacgtgctaatgccagtagataagctcaactaagtcaatccaaata 12234808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 45078317 - 45078413
Alignment:
Q  168 aaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaa 267  Q
    ||||||||||||||||| |||||    ||||||||||||| |||||||||||| |||||| ||| ||| |||||||||| ||   |||||||||||||||    
T  45078317 aaataagttgaaaacagcttatg----gacatgtcataagttatttctataagttctcctgaactgtcacacaagtgcttatatcagtagataaactcaa 45078412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 3836688 - 3836602
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||||||  ||||| ||||| ||||||| ||||||||||| | || ||||||||| ||||||||||  ||||||||||    
T  3836688 atgtcataagctattttcataagttctcccaaacagtttcacaagtgcttaagccagtagataagctcaaataaggcaatccaaata 3836602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 20553161 - 20553225
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagt 255  Q
    |||| ||||||| |||||| |||| |||||||||||| |||||||||||||||||| ||||||||    
T  20553161 tatgaacatgtcgtaagctgtttccataagctctcctgaacagtctcacaagtgcttatgctagt 20553225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 1418497 - 1418568
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||  |||||| |||| ||||||| |||| ||||||||| ||||||||||| ||||||||    
T  1418497 tttctataagctctcacaaacagcctcataagtgcttatgccagtagataagctcaaataagtcaatccaaa 1418568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 28691847 - 28691757
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||| |||||||||| |||  ||||| ||||| || ||||||||||| |||| ||| ||| |||||||||||||||||| ||||||||    
T  28691847 tatggacaagtcataagctgttttcataagatctccgaa-cagtctcacaaatgcttatgttagcagataaactcaaataagtcaatccaaa 28691757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 30751577 - 30751668
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||  |||| || |||||||||||||||| |||||||| |||||||||| |||  |||||||||  | |||||||| ||||||||    
T  30751577 tatggacatgctataaactgtttctataagctctcccaaacagtcgcacaagtgcttatgtcagtagataagtttaaataagttaatccaaa 30751668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 8427071 - 8427164
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||| ||| |||| | |||| ||| |||| || |||||||||||||||| || ||| |||||||||| ||||||||| | ||||||||||    
T  8427071 tatggacacgtcgtaagttgtttccataggctcccccaaacagtctcacaagtacttatgttagtagataagctcaaataaatcaatccaaata 8427164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 29574637 - 29574584
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtg 244  Q
    ||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||    
T  29574637 tatggacatgtcataagctgtttccataagttctccgaaacagtctcacaagtg 29574584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 33894685 - 33894782
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgcc 288  Q
    ||||||||||||||| ||| |||  ||||||||||  ||||||||||||||||||| |||  | | ||||| ||||||||||  |||||||| |||||    
T  33894685 tatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttatgtcatttgataagctcaaataagctaatccaaacatgcc 33894782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 4966214 - 4966266
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagt 243  Q
    ||||||||| |||||||   |||||||||||||||||||||||||||||||||    
T  4966214 tatggacatatcataagtggtttctataagctctcctaaacagtctcacaagt 4966266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 196 - 272
Target Start/End: Original strand, 8094369 - 8094445
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||||| |||  ||||  ||||  ||| ||||||||||||||| |||||||||||||| ||||||||||    
T  8094369 acatgtcataagctgttttcataaaatctctcaaatagtctcacaagtgcttatgctagtagataagctcaaataag 8094445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 29287285 - 29287375
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||||||||||  ||||||||| | ||| |||||||| |||| | ||  || ||||||||||||||| ||| ||||||||    
T  29287285 tatggacatgtcataagctattttcataagctctac-aaatagtctcacgagtgtttatattactagataaactcaaattagtcaatccaaa 29287375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 48157132 - 48157077
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    |||||||||| |||||| | |||||||||||||||| |||||||||||||| ||||    
T  48157132 tatggacatggcataagttgtttctataagctctcccaaacagtctcacaaatgct 48157077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 1431998 - 1431940
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagta 256  Q
    |||||||| | | |||| ||||||||||||||||||||||||||||||| |||| ||||    
T  1431998 atgtcatatgatgtttccataagctctcctaaacagtctcacaagtgcttatgccagta 1431940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 44615114 - 44615024
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaat 283  Q
    ||||||||||||||| | |||  |||||||||||| |||||| |  |||||| | |||||||||||||| ||||| ||||  |||||||||    
T  44615114 tggacatgtcataagttgttttcataagctctcctgaacagttttgcaagtggttatgctagtagataagctcaattaaggcaatccaaat 44615024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 503352 - 503279
Alignment:
Q  199 tgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||||||  ||||| |||||||||||||||||| |||||| || | |||| | |||||||||| |||||||    
T  503352 tgtcataagccgtttctttaagctctcctaaacagtgtcacaaatgtttatgcaattagataaacttaaataag 503279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 10079346 - 10079270
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||||| |||| |||||||||||||||| |||||  |||| ||||| | ||||| ||| |||| ||||||||||    
T  10079346 acatgtcatcagctgtttctataagctctcccaaacaacctcataagtgtttatgctcgtaaataagctcaaataag 10079270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 287
Target Start/End: Original strand, 23214913 - 23215009
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgc 287  Q
    |||||| |||||||||| | |||  ||||  ||||  ||||||||||| ||||| | ||||||||||||||  |||||||||| |||||||| ||||    
T  23214913 tatggaaatgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaacatgc 23215009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 3019845 - 3019928
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatc 278  Q
    |||||| |||||| | |||| |||||| ||| ||||||  ||||||||| || || ||||||||||| ||||||||||| ||||    
T  3019845 gacatgccataagttgtttccataagcactcttaaacaagctcacaagtacttatactagtagataagctcaaataagtcaatc 3019928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 27626164 - 27626084
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaag 242  Q
    ||||||| | ||||||||| |||||||||||||    ||||||||||||||| |||| ||||||| ||  ||||| |||||||||    
T  27626164 gagcttatggaaataagtttaaaacagtttatg----gacatgtcataagctgtttccataagctttctcaaacaatctcacaag 27626084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 29363602 - 29363657
Alignment:
Q  227 taaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||||||| ||| ||||||||||  |||||||||  ||||||||    
T  29363602 taaacagtctcacaagtgcttatgttagtagataagttcaaataagccaatccaaa 29363657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 41040224 - 41040303
Alignment:
Q  192 atggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||| |||||||||||| |||| ||||||||| ||||| || ||||||| | || ||   |||||||||||||||||||    
T  41040224 atggatatgtcataagctgtttccataagctcttctaaagagcctcacaaatacttatatcagtagataaactcaaataa 41040303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 42281521 - 42281486
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaac 231  Q
    |||||||||||||| |||||||||||||||||||||    
T  42281521 acatgtcataagctgtttctataagctctcctaaac 42281486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 44808189 - 44808297
Alignment:
Q  160 gcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagat 259  Q
    ||||| ||||||||| ||||||||| |||||    ||||||||||||| |||||  ||||| |||   ||||||||| |||| |||| |||||| || ||    
T  44808189 gcttatgaaaataagctgaaaacaggttatg----gacatgtcataagttattttcataaggtctatcaaacagtctgacaactgcttatgctaataaat 44808284  T
Q  260 aaactcaaataag 272  Q
    || ||||||||||    
T  44808285 aagctcaaataag 44808297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 6977472 - 6977565
Alignment:
Q  191 tatggacatgtcataa--gctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||| |  ||| |||| |||||||| |  ||||| |||||||| |||| |||| | ||||||||||| ||||||| ||||||||    
T  6977472 tatggacatgtcatgacagctgtttccataagctcactcaaacaatctcacaaatgcttatgccaatagataaactctaataagtcaatccaaa 6977565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 40598456 - 40598406
Alignment:
Q  232 agtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||| |||||| | |||||||||||||| ||||||||||| ||||||||    
T  40598456 agtctcgcaagtgttcatgctagtagataagctcaaataagtcaatccaaa 40598406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 529445 - 529510
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaa 281  Q
    ||||| ||||| ||| || |||||||||| | |||| ||||||||| ||||||||||| |||||||    
T  529445 ataagttctcccaaatagcctcacaagtgtttatgccagtagataagctcaaataagtcaatccaa 529510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 3610752 - 3610671
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||||| |||| |||| ||||| | ||| ||| ||| ||||||||| | | || ||||||||| ||||||||||    
T  3610752 tatggacatgtcattagctgtttccataaggtttcccaaaaagtatcacaagtggttaggccagtagataagctcaaataag 3610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 5288195 - 5288248
Alignment:
Q  217 taagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaata 270  Q
    |||| ||||| ||||||||||| ||||||| |||||||||||| | ||||||||    
T  5288195 taagttctcccaaacagtctcataagtgcttatgctagtagattagctcaaata 5288248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 24363569 - 24363532
Alignment:
Q  234 tctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  24363569 tctcataagtgcttatgctagtagataaactcaaataa 24363532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 30496769 - 30496842
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaata 270  Q
    |||| |||||||| |||  ||||||||||  ||  |||||| |||| ||| |||||||||||||||||||||||    
T  30496769 catgccataagctgttttcataagctctctcaagtagtctcgcaagggcttatgctagtagataaactcaaata 30496842  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 32791731 - 32791666
Alignment:
Q  217 taagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| ||||||||| |||||||| |||||| |||||||||||||| |||  |||||  ||||||||    
T  32791731 taagttctcctaaatagtctcactagtgcttatgctagtagataagctctgataagccaatccaaa 32791666  T

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Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 44989941 - 44989908
Alignment:
Q  191 tatggacatgtcataagctatttctataagctct 224  Q
    |||||||||||||||||||||||| |||||||||    
T  44989941 tatggacatgtcataagctatttccataagctct 44989908  T

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Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 7087152 - 7087064
Alignment:
Q  194 ggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| || | |||  |||| |||||  ||||| | ||||||||||| || |||||||||||||| |||| ||| ||||||||    
T  7087152 ggacatgtcatgagtttttttaataaactctctcaaacattatcacaagtgcttatactagtagataaactgaaattagtcaatccaaa 7087064  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 12834992 - 12834919
Alignment:
Q  169 aataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    |||||| |||||||||||||||    ||||||||||||||| |||| |||| |||| | || |||||||| |||||||    
T  12834992 aataagctgaaaacagtttatg----gacatgtcataagctgtttccataatctctaccaatcagtctcagaagtgct 12834919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 27121599 - 27121527
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaata 270  Q
    ||||||||||||||||| |||| |||||| ||||| |||||||  |||| ||  ||||| |||| ||||||||    
T  27121599 atgtcataagctatttccataaactctcccaaacaatctcacagatgcttatattagtaaataagctcaaata 27121527  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 31002749 - 31002781
Alignment:
Q  89 tttcatataagctataagatgttttgataagct 121  Q
    |||||||||||||||||| ||||||||||||||    
T  31002749 tttcatataagctataagctgttttgataagct 31002781  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 31341200 - 31341284
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||| || | |||| |||| |||||| ||||||||| | ||||| | |||| |||||| || ||||||||||| ||||||||    
T  31341200 atgtcattagttgtttccataaactctcccaaacagtcttaaaagtgtttatgcaagtagaaaagctcaaataagtcaatccaaa 31341284  T

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Target: scaffold0199 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 6893 - 6950
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  6893 ataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataagt 6950  T

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Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 1664452 - 1664509
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  1664452 ataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataagt 1664509  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 6496896 - 6496812
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||| ||||||||||| ||||||| ||| |||||||| |||||||| | ||| ||||||||||||||||| |||| ||||||||    
T  6496896 atgtcttaagctatttccataagctttcccaaacagtcacacaagtgattatgttagtagataaactcaaacaagtcaatccaaa 6496812  T

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Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 30191148 - 30191072
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||| | |||| ||||||||||| ||||||||| ||||||||| |||| | ||||||||||||||||||    
T  30191148 acatgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttatgccaatagataaactcaaataag 30191072  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 287
Target Start/End: Original strand, 34770927 - 34771022
Alignment:
Q  192 atggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgc 287  Q
    |||||||||||||||||| |||  ||| | ||||  ||||||| ||||||||||| ||||||| |||||||||||||||||| || ||||| ||||    
T  34770927 atggacatgtcataagctgttttcataggatctctcaaacagtttcacaagtgcttatgctagcagataaactcaaataagtcaaaccaaacatgc 34771022  T

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Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 282
Target Start/End: Original strand, 7008660 - 7008747
Alignment:
Q  194 ggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||| | | |||||||||||||||   ||| |||||||||||||| |||| ||||||||||||||||||||| ||| ||||    
T  7008660 ggacatgtcataggttgtttctataagctctctctaac-gtctcacaagtgcttatgccagtagataaactcaaataagtcaattcaaa 7008747  T

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Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 9700030 - 9700150
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagct-atttctataagctctcctaaacagtctcacaagtgctaatgctagta 256  Q
    ||||||| ||||||||| ||||||||| |||||    ||||||||||||  | ||||| | ||||||||  ||| ||||||||||||| | |||||||||    
T  9700030 gagcttatgaaaataaggtgaaaacagcttatg----gacatgtcataaattgatttc-acaagctctctcaaatagtctcacaagtgtttatgctagta 9700124  T
Q  257 gataaactcaaataagtgaatccaaa 282  Q
    ||||| ||||||||||| ||||||||    
T  9700125 gataagctcaaataagttaatccaaa 9700150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 24326099 - 24326167
Alignment:
Q  201 tcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaat 269  Q
    |||||| || |||| ||||||||||| ||||||||||||||||||| |||| ||||||||| |||||||    
T  24326099 tcataaactgtttccataagctctcccaaacagtctcacaagtgcttatgccagtagataagctcaaat 24326167  T

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Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 16162818 - 16162909
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| ||| |||||||||| |||  ||||| | ||  ||||||||||||||||| | |||||||||||||||||||||||||  ||||||||    
T  16162818 tatgaacaggtcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaa 16162909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 43393778 - 43393691
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||| | | |||||||||||||| ||||||||||| ||||| |  ||| ||||||||| || |||||||| ||||||||||    
T  43393778 catgtcataagttgtatctataagctctcccaaacagtctcaaaagtgtttttgcaagtagataagcttaaataagtcaatccaaata 43393691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 11569469 - 11569399
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataa 261  Q
    |||| |||||||||||||| |||| |||||||||| |||||||||||||||||| | |||| || ||||||    
T  11569469 tatgtacatgtcataagctgtttccataagctctcttaaacagtctcacaagtggttatgccagcagataa 11569399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 14949924 - 14949974
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaa 241  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  14949924 tatggacatgtcataagttattttcataagctctcctaaacagtctcacaa 14949974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 2487995 - 2487918
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgccattag 293  Q
    ||||| ||||| ||||||||||||||||||| |||  ||||||| ||||||||||||  |||||||| ||||| ||||    
T  2487995 ataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaacatgcccttag 2487918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 44236797 - 44236744
Alignment:
Q  229 aacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||||| |||| ||||||||||||||||||||  ||||||||    
T  44236797 aacagtctcacaagtgcttatgccagtagataaactcaaataaggtaatccaaa 44236744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 6950384 - 6950468
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatcc 279  Q
    ||||||||||| | | |||  ||||||||||| ||||| |||||||| || | |||| ||||||||||||||||||||| |||||    
T  6950384 gacatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataaactcaaataagtcaatcc 6950468  T

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Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 10075546 - 10075478
Alignment:
Q  210 atttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatc 278  Q
    ||||| |||||||||| ||||||||||| |||||  | |||| ||||||||||||||||||||| ||||    
T  10075546 atttccataagctctcttaaacagtctcgcaagtatttatgccagtagataaactcaaataagttaatc 10075478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 12361231 - 12361343
Alignment:
Q  168 aaataagttgaaaacagtttatgtatggacatgtcataagctatttctataag--ctctcctaaacagtctcacaagtgctaatgctagtagataaactc 265  Q
    ||||||||||||||||| |||||    ||||||||||||||||||||||||||  |||||  ||| ||||| |||||| || ||   |||||||||  ||    
T  12361231 aaataagttgaaaacagcttatg----gacatgtcataagctatttctataagatctctctcaaagagtctaacaagtacttatatcagtagataagttc 12361326  T
Q  266 aaataagtgaatccaaa 282  Q
    |||||||| ||||||||    
T  12361327 aaataagtcaatccaaa 12361343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 4055657 - 4055585
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagt 234  Q
    ||||||| | ||||||| |||||||||||||||    ||||||||||||| ||||||||||| |||||| |||||||    
T  4055657 gagcttaaggaaataagctgaaaacagtttatg----gacatgtcataagttatttctataaactctcccaaacagt 4055585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 7878534 - 7878448
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||||| || ||||||||||||| |||||||||||  ||| || |||| |||||||||||| | |||||  ||||||||    
T  7878534 gacatgtcataagctgtt-ctataagctctcccaaacagtctcattagttcttatgcaagtagataaacttagataagccaatccaaa 7878448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 21130671 - 21130722
Alignment:
Q  192 atggacatgtcataagctatttctataagctctcctaaacagtctcacaagt 243  Q
    |||||||||||| |||||||||| ||||||||||  ||||||||||||||||    
T  21130671 atggacatgtcaaaagctatttccataagctctctcaaacagtctcacaagt 21130722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 284
Target Start/End: Original strand, 26410340 - 26410431
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||||||| |||| |||| ||||||||||| || |||||||| ||||||| |||  ||| |||||||| || ||||  ||||||||||    
T  26410340 tggacatgtcatgagctgtttccataagctctcccaagcagtctcagaagtgcttatgtcagttgataaacttaactaagccaatccaaata 26410431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 40356994 - 40357077
Alignment:
Q  199 tgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||| |||||| ||| |||||| ||||  ||||||| || |  |||||||||||||||||| | ||||||||    
T  40356994 tgtcataagctatttcaataagccctcataaacaatctctgaagtgcttatacctgtagataaactcaaataaatcaatccaaa 40357077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 31884938 - 31884872
Alignment:
Q  205 aagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||| ||| |||||| | ||| ||||| ||||||||||||| |||||||||||||| |||||||||    
T  31884938 aagctgtttttataagttttcccaaacactctcacaagtgcttatgctagtagataagctcaaataa 31884872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 1889122 - 1889065
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||| ||| ||||||||||| ||||| | |||| |||||||||||||||||||||    
T  1889122 ataagctttcccaaacagtctcaaaagtgtttatgccagtagataaactcaaataagt 1889065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 7918768 - 7918723
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataa 261  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||    
T  7918768 ataagctctcccaaacagtctcacaagtgtttatgctagtagataa 7918723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 10939458 - 10939523
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaa 281  Q
    ||||| ||||||||||||||||| ||||||| || |  |||||||||||||||||| | |||||||    
T  10939458 ataagttctcctaaacagtctcagaagtgcttatacaggtagataaactcaaataattcaatccaa 10939523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 962304 - 962260
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||    
T  962304 aaacagtctcccaagtgcttatgctagcagataaactcaaataag 962260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 14926967 - 14926903
Alignment:
Q  218 aagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||  ||||||||||||||||||| |||| |||| ||||  |||||||||| ||||||||    
T  14926967 aagctctctcaaacagtctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaa 14926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 18356384 - 18356467
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||| || ||||| |||| |||| ||||||||||||||| |||| || |||||||||||  ||||||||||  |||||||    
T  18356384 atgtcataacctgtttctttaagttctcgtaaacagtctcacaa-tgcttatactagtagataagttcaaataagttgatccaaa 18356467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 33553301 - 33553405
Alignment:
Q  194 ggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgccattag 293  Q
    |||||||||||||| |  ||| ||||||||| | ||||||  ||||||||||| ||| |  ||||||| ||||||||||  |||||||| | ||| ||||    
T  33553301 ggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagctaatccaaacaagcccttag 33553400  T
Q  294 ttaaa 298  Q
    |||||    
T  33553401 ttaaa 33553405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 4560564 - 4560651
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||| ||||| |||||| ||||| ||| | |||||  |||||||||||| |||  | ||||||| ||||||||||| ||||||||    
T  4560564 gacatgttataagttatttccataagttcttccaaacaacctcacaagtgcttatgtcaatagataagctcaaataagtcaatccaaa 4560651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 4763952 - 4764043
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||| || | |||  | |||||||| |||| ||||||| | ||||| |||||||| |||||  |||||||||| ||||||||    
T  4763952 tatggacatgtcattagatgttttcaaaagctctcttaaatagtctcataggtgcttatgctagtggataagttcaaataagtcaatccaaa 4764043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 20672838 - 20672889
Alignment:
Q  221 ctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||| ||||||||||| ||||||| |||||||| | ||||||||||||||    
T  20672838 ctctcccaaacagtctcagaagtgcttatgctagttggtaaactcaaataag 20672889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 284
Target Start/End: Complemental strand, 39551219 - 39551128
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||||| | |||| ||||  ||||| ||||||| |||||| |||| ||    |||||||| ||||||||||| ||||||||||    
T  39551219 tggacatgtcataagttgtttccataaattctcccaaacagtttcacaaatgcttatatccgtagataatctcaaataagtcaatccaaata 39551128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 39881733 - 39881646
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatc 278  Q
    |||| ||||||||||||||||||  | ||||||| | ||||| ||||||||||| | |||| | |||||||  |||||||||| ||||    
T  39881733 tatgaacatgtcataagctattttcacaagctcttccaaacaatctcacaagtgtttatgccaatagataagttcaaataagtcaatc 39881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 40071807 - 40071898
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| |||||||||||| | |||| ||||||||||| ||||| ||||||| || |  ||| ||| |||||| |||||| |||| ||||||||    
T  40071807 tatgaacatgtcataagttgtttccataagctctcccaaacactctcacatgttcatatggtaggagataagctcaaagaagtcaatccaaa 40071898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 29169948 - 29169882
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    |||||| |||||||| ||| |||  ||||||||||| ||||| | ||||||||||| ||||||||||    
T  29169948 tatggatatgtcatatgctgttttcataagctctcccaaacaatttcacaagtgcttatgctagtag 29169882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 11415212 - 11415293
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||||||| ||||||| |||| |||| |||||  ||||| |||||||||| || ||| ||||| |||| | ||||||||    
T  11415212 tatggacatgttataagctgtttccataaactctctaaaacaatctcacaagtacttatgttagtaaataagcacaaataag 11415293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 25881419 - 25881350
Alignment:
Q  199 tgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaa 268  Q
    ||||||||| | ||||| ||||||||   |||||||||||||||| || |||  ||||||||||||||||    
T  25881419 tgtcataagttgtttctctaagctctttcaaacagtctcacaagtacttatgtcagtagataaactcaaa 25881350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 33696934 - 33696882
Alignment:
Q  229 aacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||| |||||||| |||| || |||||||||||||||||| ||||||||    
T  33696934 aacagtctcgcaagtgcttatgc-agcagataaactcaaataagtcaatccaaa 33696882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 3953885 - 3953941
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||| ||||| ||||||| ||||||||||| |||| ||||||||  ||||||||||    
T  3953885 ataagttctcccaaacagtttcacaagtgcttatgccagtagataggctcaaataag 3953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 18331815 - 18331863
Alignment:
Q  234 tctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||| ||| ||||||||||  |||||||||| ||||||||    
T  18331815 tctcacaagtgcttatgttagtagataagatcaaataagtcaatccaaa 18331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 31315441 - 31315379
Alignment:
Q  209 tatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    |||||||||||||||||  ||||||| ||||||||||| || | |||||||||||||||| ||||    
T  31315441 tatttctataagctctctcaaacagt-tcacaagtgcttatac-agtagataaactcaaaaaagt 31315379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 34080276 - 34080188
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatcc 279  Q
    |||||||||||||||| | ||||||  || | |||| ||||||||| ||||||||   ||| ||||||||| |||||||| || |||||    
T  34080276 tatggacatgtcataaacgatttcttcaaaccctcccaaacagtcttacaagtgcatgtgccagtagataagctcaaatatgtaaatcc 34080188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 40534257 - 40534338
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||| ||||||||| | |||  |||| |||||||||||||||    
T  40534257 tatgaacatgtcataagctacttccataagctctcctaaacagtatcacaagtgtttatgtcagtaaataaactcaaataag 40534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 32172711 - 32172791
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||||||||||||| | |||| ||||||||||| ||||  ||||||||||||| ||||||||| |||| |||||||||    
T  32172711 tatggacatgtcataagttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataagctcaaataa 32172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 13781887 - 13781812
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactca 266  Q
    |||| ||||||||||||||||||||| ||||||| | |||||||||||||||| || ||| |||||||||| ||||    
T  13781887 tatgcacatgtcataagctatttctacaagctctaccaaacagtctcacaagtacttatgttagtagataagctca 13781812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 2092418 - 2092508
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||||||||||| ||||  ||||  ||| |||| |||||||  | ||||||||||||||||||||||||||  |||||||    
T  2092418 tatggacatgtcataagctatttccataacttctcacaaa-agtcccacaagtatttatgctagtagataaactcaaataagtcgatccaaa 2092508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 11457156 - 11457238
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||||||||| | |||| ||||||||| | ||||||||||||||||| |  ||| | ||||||| |||||||||||    
T  11457156 tatggacatgtcataagttgtttccataagctcttcaaaacagtctcacaagtgtttctgccaatagataagctcaaataagt 11457238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 40335876 - 40335794
Alignment:
Q  200 gtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| ||||| |||| |||| |||| | ||||||||||||||||| |  ||| ||||||||||||||||||||| ||||||||    
T  40335876 gtcacaagctctttccataaactctaccaaacagtctcacaagtgtttgtgcgagtagataaactcaaataagtcaatccaaa 40335794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 14980567 - 14980660
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||| ||||||||||||  |||| |||||||||||  ||||||||||   |||||| |||| ||||||||| ||||||||||| | ||||||||    
T  14980567 tatgtacatgtcataagtcatttttataagctctctcaaacagtctctatagtgcttatgccagtagataagctcaaataagtcattccaaata 14980660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 26516466 - 26516546
Alignment:
Q  192 atggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||| ||||||||| |||  |||||||||| |||||| || |||| ||||| |||| |||| |||||||||||||||    
T  26516466 atggacatatcataagctgttttcataagctctcttaaacattcccacaggtgcttatgccagtaaataaactcaaataag 26516546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 28586771 - 28586711
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtaga 258  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||| |||| |||||| ||||    
T  28586771 atgtcataagctatttccataagctctcccaaacagtttcacaaatgcttatgctattaga 28586711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 10638547 - 10638456
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||||||||| ||    |||||||||| ||| ||||| ||||||||| ||| | |||||||| || |||||||| ||||||||    
T  10638547 tatggacatgtcataagcttttaaagtaagctctcccaaatagtcttacaagtgcttatgttggtagataatcttaaataagtcaatccaaa 10638456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 19177533 - 19177596
Alignment:
Q  221 ctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||| ||||||||||||||||| | |||| | ||| ||||||||||||||| ||||||||||    
T  19177533 ctctcccaaacagtctcacaagtgttcatgccaataggtaaactcaaataagtcaatccaaata 19177596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 21768238 - 21768147
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataag--ctctcctaaacagtctcacaagtgctaatgc 251  Q
    ||||||| |||||||||||||||||||     |||||||||||||||||||| |||  |||||  |||||||| ||||||||| ||||||| ||||    
T  21768238 gagcttacgaaaataagttgaaaacag----cgtatggacatgtcataagctgttttcataagcactctcctagacagtctcagaagtgctcatgc 21768147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 25705692 - 25705580
Alignment:
Q  166 gaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactc 265  Q
    ||||||||||||||||||| ||||     ||||||||| ||| | ||||| ||||||| ||||||   ||||||||||||| ||| ||||||||||  ||    
T  25705692 gaaaataagttgaaaacagcttata----gacatgtcacaagttgtttctgtaagctcacctaaatgatctcacaagtgcttatgttagtagataagttc 25705597  T
Q  266 aaataagtgaatccaaa 282  Q
    |||||| | ||||||||    
T  25705596 aaataatttaatccaaa 25705580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 30217140 - 30217194
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    |||||||||| |||||| || ||| |||||||||||||||||||||||||||||||    
T  30217140 tatggacatg-cataagataattccataagctctcctaaacagtctcacaagtgct 30217194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 1019478 - 1019400
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaat 269  Q
    ||||| |||| |||||||||||| |||||||||||||||||||| |||||  || | |||  |||| ||||||||||||    
T  1019478 tatggccatggcataagctatttttataagctctcctaaacagtatcacacatgtttatgtcagtatataaactcaaat 1019400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 11667198 - 11667276
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaat 269  Q
    |||||||||||||||| || |||||| ||||||||| | | || || || ||||||  |||||||||||||||||||||    
T  11667198 tatggacatgtcataatctgtttctacaagctctcccagataggcttaccagtgcttctgctagtagataaactcaaat 11667276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 38047891 - 38047821
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataa 261  Q
    ||||||||||||||||| | |||| ||||||||||| |||||||| ||||||| || ||  ||||||||||    
T  38047891 tatggacatgtcataagttgtttccataagctctcccaaacagtcacacaagtacttataatagtagataa 38047821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 8820828 - 8820909
Alignment:
Q  201 tcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||| ||||||  |||||||||| ||||||| |||| ||  || ||||||||||||||  |||||||||| ||||||||    
T  8820828 tcataagttatttccctaagctctccaaaacagtttcaccagctcttatgctagtagataagatcaaataagtaaatccaaa 8820909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 11700390 - 11700321
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagata 260  Q
    ||||||||||||||||| | |||| |||| ||||||| || ||||||||||||||| || || |||||||    
T  11700390 tatggacatgtcataagttgtttccataaactctcctcaatagtctcacaagtgcttatcctggtagata 11700321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 17258924 - 17258814
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||| ||||||||| ||||||||| ||||| |    |||||||||||||||||  ||| | ||||| ||| | | ||||||||||| ||| |||| |    
T  17258924 gagcttatgaaaataagctgaaaacagcttatgaa----catgtcataagctattttcataggttctcccaaagaatgtcacaagtgcttatgttagttg 17258829  T
Q  258 ataaactcaaataag 272  Q
    |||| ||||||||||    
T  17258828 ataagctcaaataag 17258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 25720405 - 25720348
Alignment:
Q  215 tataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||  | ||||||||||||||||| |||| ||||||||| ||||||||||    
T  25720405 tataagctctctcagacagtctcacaagtgcttatgccagtagataacctcaaataag 25720348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 35963299 - 35963348
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcaca 240  Q
    ||||||||||||||| |||||||| ||||| |||||||||||| ||||||    
T  35963299 tatggacatgtcatacgctatttccataagttctcctaaacagactcaca 35963348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 39257406 - 39257325
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||||| || | ||||| |||||| ||  | ||||||||||||||||| ||| |||||||||| || |||||||    
T  39257406 tatggacatgtcattagttgtttctctaagctttcgcacacagtctcacaagtgcttatgttagtagataagcttaaataag 39257325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 10771863 - 10771807
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||| ||||||||||||| |||| ||||||||| ||||||||||  ||||||||||    
T  10771863 aaacaatctcacaagtgcttatgccagtagataagctcaaataagccaatccaaata 10771807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 11684483 - 11684538
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||| || |||||||||||||||||||| |||  ||||||||| |||||||||    
T  11684483 ataagctttcttaaacagtctcacaagtgctcatgacagtagataagctcaaataa 11684538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 32849244 - 32849327
Alignment:
Q  199 tgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||| | |||  ||||| ||||| |||||| |||||||||||| ||| |||||||||| || |||||||| ||| ||||    
T  32849244 tgtcataagtttttttcataagttctcccaaacagcctcacaagtgcttatgatagtagataagcttaaataagtcaattcaaa 32849327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 35095798 - 35095720
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaata 270  Q
    |||| |||||||||||| |||||| ||||||||| | |||||||||||  |||| | ||  |||||||||||||||||||    
T  35095798 tatgtacatgtcataagatatttccataagctcttccaaacagtctcattagtgtttat-ttagtagataaactcaaata 35095720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 42646949 - 42647039
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| ||||||||||||||||||  ||||| ||| | ||| |||||  ||||||||||||  ||||||||| ||||||||||  ||||||||    
T  42646949 tatgaacatgtcataagctattttcataagttcttccaaatagtctt-caagtgctaatgtcagtagataagctcaaataagccaatccaaa 42647039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 499738 - 499652
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||| |||  ||||| ||||| |||||| || ||| ||||| |||  ||||| ||| ||||||||||| ||||||||    
T  499738 acatgtcataagctgttttcataagttctcccaaacagcctaacaggtgcttatgtcagtaggtaagctcaaataagtcaatccaaa 499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 1899212 - 1899293
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    |||| |||||||||||||| ||| | |||||||| | |||||||||||||  || | ||||||||| |||| |||||||||||    
T  1899212 tatgcacatgtcataagctgttt-tgtaagctcttcaaaacagtctcacatatgtttatgctagtaaataagctcaaataagt 1899293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 2568723 - 2568797
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||| |||  ||||| ||| |||||||||||| |||||||| |  | ||||||||| ||||||||||    
T  2568723 atgtcataagctgttttcataagttcttctaaacagtctctcaagtgcttacaccagtagataagctcaaataag 2568797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 13604890 - 13604827
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctc 225  Q
    ||||||| ||||||||||||||||||    | |||||||||||||||||||| |||  ||||||||||    
T  13604890 gagcttatgaaaataagttgaaaaca----acgtatggacatgtcataagctgttttcataagctctc 13604827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 26005004 - 26004918
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||| |||||||| ||||| |||| | | | || |||| | ||||||||| |||||||||||||| || |||||||| ||||||||    
T  26005004 acatgccataagctgtttctgtaagtttttccaagcagtttgacaagtgcttatgctagtagataagctaaaataagtcaatccaaa 26004918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 40499738 - 40499696
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacag 233  Q
    ||||||||||||||||| | |||| ||||||||||||||||||    
T  40499738 tatggacatgtcataagttgtttccataagctctcctaaacag 40499696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 42181084 - 42181006
Alignment:
Q  204 taagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| ||||||||||| |||  ||||||||| |||  ||||||||| ||||  |||||| ||| ||||||||    
T  42181084 taagctatttccataagctctcccaaattgtctcacaaatgcatatgctagtaaataagttcaaattagtcaatccaaa 42181006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 985673 - 985726
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    ||||||||||||||| |||||  |||| ||||||||| ||||||||||| ||||    
T  985673 tggacatgtcataagttatttgcataatctctcctaagcagtctcacaattgct 985726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 11714901 - 11714785
Alignment:
Q  168 aaataagttgaaaacagtttatg--tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactc 265  Q
    ||||||||||||||||| |||||  |||| ||||||| ||| || ||| |||||| ||||| ||||  ||||||||||| | ||||  |||| ||| | |    
T  11714901 aaataagttgaaaacagcttatgattatgaacatgtcctaatctgtttttataagttctcccaaactatctcacaagtgtttatgcctgtagttaagcac 11714802  T
Q  266 aaataagtgaatccaaa 282  Q
    |||||||  ||||||||    
T  11714801 aaataagcaaatccaaa 11714785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 14714977 - 14714944
Alignment:
Q  36 taagtgattacgtataagctatttctataacaaa 69  Q
    |||||||||| |||||||||||||||||||||||    
T  14714977 taagtgattatgtataagctatttctataacaaa 14714944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 16945024 - 16944913
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatg----tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgcta 253  Q
    ||||||| | ||||||| ||||||||| |||||    ||||||||| ||||||| |||||| || | |||||  ||||||| ||||||||      ||||    
T  16945024 gagcttaagtaaataagctgaaaacagcttatggtcttatggacatatcataagttatttccatgacctctctcaaacagtttcacaagt------gcta 16944931  T
Q  254 gtagataaactcaaataa 271  Q
    ||||||||||||||||||    
T  16944930 gtagataaactcaaataa 16944913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 6109541 - 6109621
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||||| ||||||  | |||| ||||||||||| ||| | ||||||||||| | |||| | |||| ||||||||||||    
T  6109541 tatggacatatcataatttttttccataagctctccaaaatattctcacaagtgtttatgccaatagacaaactcaaataa 6109621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 12334313 - 12334277
Alignment:
Q  248 atgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  12334313 atgctactagataaactcaaataagtcaatccaaata 12334277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 29336699 - 29336779
Alignment:
Q  202 cataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||| | |||| ||||||||||  || ||||||||||||||||  ||| | ||||||||||||||| | | ||||||||    
T  29336699 cataagttgtttccataagctctctcaatcagtctcacaagtgcttttgccaatagataaactcaaatgattcaatccaaa 29336779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 31723904 - 31723956
Alignment:
Q  232 agtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||| ||||| | ||||||||| |||| ||||||||||| ||||||||||    
T  31723904 agtctcataagtgtttatgctagtacataagctcaaataagtcaatccaaata 31723956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 41277347 - 41277283
Alignment:
Q  218 aagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||||||||||||||||  | ||| ||||| ||||  |||||||| | ||||||||    
T  41277347 aagctctcctaaacagtctcacaagtatttatggtagtacataagttcaaataaataaatccaaa 41277283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 16503415 - 16503492
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||||| || |||| | ||||||| ||||||||||    
T  16503415 gacatgtcataagctatttctctaagctctcccaaacagtgtcacaagtacttatgccactagataatctcaaataag 16503492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 9996803 - 9996887
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||| | |||||||||||||||| || ||||||||||||| || |||||||| ||||| ||||||||||| || |||||    
T  9996803 atgtcataagttgtttctataagctctcccaagcagtctcacaagtacttatgctagttgataagctcaaataagtcaagccaaa 9996887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 37276804 - 37276893
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| |||||||||||||||||||||||  | |||| ||||||||||||||||||| ||  ||||||||||||| ||||||||  |||||||    
T  37276804 tatgaacatgtcataagctatttctata--ccctcccaaacagtctcacaagtgcttatattagtagataaacttaaataagtcgatccaaa 37276893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 5759586 - 5759505
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    |||||||||||| |||||| |||| ||||||||||| |||||||||||||||| || || | | |||||||||||||||||||    
T  5759586 tatggacatgtc-taagctgtttccataagctctcccaaacagtctcacaagtacttataccaatagataaactcaaataagt 5759505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 28803542 - 28803449
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||||||| | |||| ||| | ||||  ||||||||||||| ||||| ||||  |||||||| ||||||||||| ||||||||||    
T  28803542 tatggacatgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaata 28803449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 32364742 - 32364650
Alignment:
Q  192 atggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||| ||||||||||  || |||||||||||| ||||| | |||||| |||| ||| |||||||||  ||||||||||| ||||||||||    
T  32364742 atggacacgtcataagctggttttataagctctcccaaacaatttcacaaatgcttatgatagtagatattctcaaataagtcaatccaaata 32364650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 11513979 - 11514034
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||    
T  11513979 ataagctctctaaaacagtctcacaagtgcttatgctagtagataatctcaaataa 11514034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 15120246 - 15120332
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||| | |||| ||||||||||| ||||||  |||||| || | ||||||||||||||  |||||||||| ||||||||    
T  15120246 acatgtcataagttgtttccataagctctcccaaacagattcacaactgtttatgctagtagataagttcaaataagtcaatccaaa 15120332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 40418009 - 40417923
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||||||||||||| ||||  ||||| ||   |||| ||| ||||||||||||||| |||||||||  ||||||||||    
T  40418009 atgtcataagctatttctataagttctcacaaacactcatgcaagcgcttatgctagtagataaaatcaaataagacaatccaaata 40417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 1318296 - 1318371
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaat 269  Q
    ||||||||||||||| | |||  ||||||||||  ||||||||||||||||||| |||| ||||||||| |||||||    
T  1318296 tggacatgtcataagatgttttcataagctctcacaaacagtctcacaagtgcttatgc-agtagataatctcaaat 1318371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 14209271 - 14209339
Alignment:
Q  203 ataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||||||||||| ||||||||||| || ||||||| || ||||| || |||||| ||||||||||||||    
T  14209271 ataagctatttccataagctctcccaagcagtctctcaggtgcttatactagtaaataaactcaaataa 14209339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 17221552 - 17221472
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||||| |||||||||| |||||| ||||||||| |  |||||||||| |||||||||||  |||||||||  ||||||||    
T  17221552 tatggatatgtcataagatatttccataagctcttccgaacagtctcagaagtgctaatgacagtagataatttcaaataa 17221472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 19978025 - 19978096
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||| ||||  |||||||||| |||||||| ||  || |||||||||| |||||||||||||||||    
T  19978025 tttctataagttctctcaaacagtctcgcaagtgcttattttaatagataaactaaaataagtgaatccaaa 19978096  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 22878176 - 22878247
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| ||||| ||||| ||||||||||||||||||| |||  ||| ||||| ||||||||||| ||||||||    
T  22878176 tttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaa 22878247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 15370298 - 15370244
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||| |||| |||| ||||||||| ||||||||||| ||||||||    
T  15370298 aaacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaa 15370244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 787390 - 787459
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagata 260  Q
    ||||||||||||||||||| |||  ||||| ||||  ||||||| ||||||||||| |||| ||||||||    
T  787390 tatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgccagtagata 787459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 1633455 - 1633419
Alignment:
Q  248 atgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1633455 atgctagtagataaactcaaataagtaaatccaaata 1633419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 14316150 - 14316078
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaata 270  Q
    |||||||||| | |||| ||||||||||| ||| |||||||||||  || |||||||||| ||| ||||||||    
T  14316150 atgtcataagttgtttccataagctctccaaaatagtctcacaagcactcatgctagtagttaagctcaaata 14316078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 29429762 - 29429714
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    ||||||| || | |||||||||||||||| |||||||||||||||||||    
T  29429762 atgtcattagttgtttctataagctctcccaaacagtctcacaagtgct 29429714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 36677722 - 36677802
Alignment:
Q  203 ataagctatttctataagctctcctaaacagtctcacaagtgctaatg-ctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||| |||  |||||||||| | || ||||||||||||||| ||| | | ||||||||||||||||||| ||||||||    
T  36677722 ataagctgttttcataagctctcttgaatagtctcacaagtgcttatgtcaaatagataaactcaaataagttaatccaaa 36677802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 757507 - 757586
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaata 270  Q
    ||||||||||||| || || ||| ||||||| |||| ||||||||||| ||||  | ||||||||| |||| ||||||||    
T  757507 tatggacatgtcaaaatctgtttttataagccctcccaaacagtctcataagtatttatgctagtaaataagctcaaata 757586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 7103457 - 7103394
Alignment:
Q  219 agctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||| ||||| ||||||| ||||| |||  | ||||||||||||||||||| ||||||||    
T  7103457 agctctcccaaacaatctcacatgtgctcatgtcaatagataaactcaaataagtcaatccaaa 7103394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 18884926 - 18884977
Alignment:
Q  192 atggacatgtcataagctatttctataagctctcctaaacagtctcacaagt 243  Q
    ||||| |||||||||||| |||||||||||||||| |||||| || ||||||    
T  18884926 atggaaatgtcataagctgtttctataagctctcccaaacagccttacaagt 18884977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 29430817 - 29430896
Alignment:
Q  192 atggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||||||||||||||||||  ||||| ||| | ||| |||| |||||||| | |||  ||||||||| |||||||||    
T  29430817 atggacatgtcataagctattttcataagttcttccaaatagtcccacaagtgtttatgtcagtagataagctcaaataa 29430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 32821867 - 32821954
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatc 278  Q
    ||||||||||||||||| | ||||||||| |||| | |||||||||  ||| |||| | | | |||||||| ||||||||||| ||||    
T  32821867 tatggacatgtcataagttgtttctataaactcttccaaacagtcttgcaaatgcttacgttggtagataagctcaaataagtcaatc 32821954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 283
Target Start/End: Complemental strand, 33319818 - 33319736
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaat 283  Q
    |||||||||||||||| || ||| ||||| ||||||||||||||   || |||| |||||| || ||||||||||  |||||||||    
T  33319818 atgtcataagctatttataaaagttctcccaaacagtctcacaa---cttatgccagtagacaagctcaaataagccaatccaaat 33319736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 42409259 - 42409220
Alignment:
Q  232 agtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  42409259 agtctcacaaatgctaatactagtagataaactcaaataa 42409220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 6547984 - 6548038
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||| || |||||||||||||| ||  ||||||| ||||||||    
T  6547984 aaacagtctcacaagttcttatgctagtagataagcttgaataagtcaatccaaa 6548038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 8820299 - 8820217
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatc 278  Q
    |||||||| ||||| |||| ||||| |||| ||| |||||||  ||||||| ||  ||||||||| |||||||||||| ||||    
T  8820299 acatgtcagaagctgtttccataaggtctcttaagcagtctcgaaagtgcttatattagtagatatactcaaataagtcaatc 8820217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 41170709 - 41170759
Alignment:
Q  232 agtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||| | ||| |||||||||||||||||||||  ||||||||    
T  41170709 agtctcacaagtgtttatgttagtagataaactcaaataagccaatccaaa 41170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 19243603 - 19243680
Alignment:
Q  203 ataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatcca 280  Q
    ||||||| ||||||||||||| || ||||||||||| || |||| |||  |||||||||  ||||||| || ||||||    
T  19243603 ataagctgtttctataagctcgcccaaacagtctcagaaatgcttatgtcagtagataagttcaaatatgtcaatcca 19243680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 25609862 - 25609935
Alignment:
Q  199 tgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||||| | |||| ||||||| | | || ||||||||||||| || ||| |||||||||| ||||||||||    
T  25609862 tgtcataagttgtttccataagctattccaagcagtctcacaagttcttatgttagtagataagctcaaataag 25609935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 25800671 - 25800594
Alignment:
Q  201 tcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatc 278  Q
    |||||||||| |||   ||||||||| |||||||||||| |||||| | | ||||||||||  |||||||||| ||||    
T  25800671 tcataagctagttcatcaagctctcccaaacagtctcacgagtgctcacgttagtagataagttcaaataagtcaatc 25800594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 38239599 - 38239554
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataa 261  Q
    ||||||||||||||| ||||||||||||||  |||| |||||||||    
T  38239599 ataagctctcctaaagagtctcacaagtgcctatgccagtagataa 38239554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 40943977 - 40944062
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||| |||  |||| || | | ||||||| ||||||||||| |||  | ||||||||||||||||||  ||||||||    
T  40943977 catgtcataagctgttttcataaacttttccaaacagtttcacaagtgcttatgtcattagataaactcaaataagctaatccaaa 40944062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 43985267 - 43985360
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||||||| | ||||  ||| |||||  ||||||| | ||||||| | |||  |||||||||||| ||||||||  |||||||||    
T  43985267 tatggacatgtcataagttgtttcagtaatctctctcaaacagttttacaagtgtttatgtcagtagataaacttaaataagtcgatccaaata 43985360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 9878694 - 9878618
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaa 267  Q
    ||||||||||||||||| | |||| ||||||||| |   ||||||||| ||||||| | ||||||| |||| |||||    
T  9878694 tatggacatgtcataagttgtttccataagctcttccctacagtctcagaagtgcttaagctagtaaataagctcaa 9878618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 32614960 - 32614880
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||| |||||||||||| | ||| |||||| |||| || || || |||||||||||  |||||||||||||  ||||||||    
T  32614960 tatgaacatgtcataagttgtttttataagttctcttacactgtatcacaagtgcttgtgctagtagataagttcaaataa 32614880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 34652077 - 34651996
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagt 243  Q
    ||||||| | ||||||||||||||||| |||||    ||||||||||||| | |||||||||||| ||   ||| |||||||||||    
T  34652077 gagcttatggaaataagttgaaaacagcttatg----gacatgtcataagttgtttctataagctttctccaaccgtctcacaagt 34651996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 37419634 - 37419582
Alignment:
Q  236 tcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgcc 288  Q
    ||||||||||| ||   ||||||||||||||||||||| |||||||| |||||    
T  37419634 tcacaagtgcttatataagtagataaactcaaataagtcaatccaaacatgcc 37419582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 284
Target Start/End: Original strand, 40158781 - 40158869
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||||||||| |||  ||||| || || || ||||||||||||| || |||  ||||||||  ||||||||||  ||||||||||    
T  40158781 acatgtcataagctgttttcataagttcccccaatcagtctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaata 40158869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 42852677 - 42852621
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||||||||||||| |||| || ||||||  |||||||||  ||||||||||    
T  42852677 aaacagtctcacaagtgcttatgccagcagataagttcaaataagcaaatccaaata 42852621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 43141862 - 43141898
Alignment:
Q  92 catataagctataagatgttttgataagctaccctga 128  Q
    |||||||||||||||||||||| |||||||| |||||    
T  43141862 catataagctataagatgttttcataagctatcctga 43141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 3738195 - 3738247
Alignment:
Q  227 taaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatcc 279  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  3738195 taaacagtctcacaagtgcttatgctagtagataaactcaaataagtcaatcc 3738247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 2460159 - 2460072
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||| | |||| ||||||||||  |||||||||||||||| || ||||||||  |||| ||||||||||| ||||||||    
T  2460159 gacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataagttaatccaaa 2460072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 287
Target Start/End: Complemental strand, 8420207 - 8420112
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaat-aagtgaatccaaatatgc 287  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||| | |||  | ||||||| ||||||| |||| |||||||| ||||    
T  8420207 tggacatgtcataagctatttctataagctctcactaacagtctcacaagtgtttatgtcaatagataagctcaaataaagtcaatccaaacatgc 8420112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 2455839 - 2455950
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||| | |||||||||||||| ||||||||    | ||||||||||| | |||| ||||||||| ||||||| |||| |||||||| ||||  ||||    
T  2455839 gagcttatggaaataagttgaaaatagtttatg----ggcatgtcataagttgtttccataagctcttctaaacaatctcgcaagtgcttatgccggtag 2455934  T
Q  258 ataaactcaaataagt 273  Q
    |||| |||||||||||    
T  2455935 ataagctcaaataagt 2455950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 32917255 - 32917337
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||||||||| | |||| ||||||||||| ||||||||||||||||| | || ||||||| ||| ||| |||||||    
T  32917255 tatggacatgtcataagttgtttccataagctctcccaaacagtctcacaagtgtttattctagtaggtaagctctaataagt 32917337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 7148695 - 7148815
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||| |||||||||||||||| || |    |||||||| |||||||| | ||||  |||||||| || |||| ||||||||||||| |||| | |||    
T  7148695 gagcttatgaaaataagttgaaaatagct----tatggacaagtcataagttgtttccgtaagctctgctgaacactctcacaagtgcttatgcgactag 7148790  T
Q  258 ataaactcaaataagtgaatccaaa 282  Q
    |||| ||||||||||| || |||||    
T  7148791 ataagctcaaataagtcaaaccaaa 7148815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 9041472 - 9041394
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaat 269  Q
    |||||||||||||||||||||||   |||||||||| ||||| ||| |||| |||| |||||||| ||||| |||||||    
T  9041472 tatggacatgtcataagctattttcgtaagctctccaaaacattctgacaaatgcttatgctagttgataagctcaaat 9041394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 32976036 - 32976106
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataa 261  Q
    |||||| |||||||||||| |||||||||||||| | |||||||||||||||| || |||| |||| ||||    
T  32976036 tatggaaatgtcataagctgtttctataagctcttccaaacagtctcacaagtacttatgccagtaaataa 32976106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 3738127 - 3738199
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaac 263  Q
    ||||||||||||||||||| |||| | ||| |||   ||||||||||||||| ||| ||||||||||||||||    
T  3738127 tatggacatgtcataagctgtttccacaagatctttcaaacagtctcacaagggcttatgctagtagataaac 3738199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 12111066 - 12111118
Alignment:
Q  232 agtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||| |||||||| |||||||||||||| ||||||||||| ||||||||||    
T  12111066 agtctcgcaagtgcttatgctagtagataagctcaaataagtcaatccaaata 12111118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 4325317 - 4325226
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| |||| |||||||  |||||| ||  ||| ||||||||||||| | ||| ||||||||||||| |||| ||| ||||||||    
T  4325317 tatggacatgtgataaactatttccctaagctgtcacaaatagtctcacaagtgtttatgttagtagataaactaaaattagtcaatccaaa 4325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 26559214 - 26559159
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaat 283  Q
    |||||||||||||| |||| |||| ||||| ||||||||||||||| |||||||||    
T  26559214 aaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaat 26559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 7901818 - 7901752
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||| | ||||||||||||||| ||| ||| || || |||||||||||||||| ||||||||    
T  7901818 ataagctcttccaaacagtctcacaagggcttatgatactatataaactcaaataagttaatccaaa 7901752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 33911290 - 33911212
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||  |||||||||  ||||| |||| |||||||| |||| ||||||  |||||||||||||| ||||||||||    
T  33911290 gacatgtccaaagctattttcataagatctcttaaacagtttcacgagtgcttgtgctagtagataaattcaaataagt 33911212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 7351657 - 7351601
Alignment:
Q  217 taagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    |||| |||| |||||| ||||||||||||| |||  |||||||||||||||||||||    
T  7351657 taagttctcataaacaatctcacaagtgcttatgtcagtagataaactcaaataagt 7351601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 27857416 - 27857496
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||||| |||||||||| | |||  ||||||||||| ||||||| |||||||||   |||  |||||||||||||||||||    
T  27857416 tatggagatgtcataagttgttttcataagctctcccaaacagtttcacaagtgtctatgtcagtagataaactcaaataa 27857496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 273
Target Start/End: Original strand, 30865547 - 30865623
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||| |||||| |||||||||| ||||| |||| ||||||| | ||| ||  |||||| |||||||||||    
T  30865547 catgtcataagttatttccataagctctcttaaactgtctaacaagtgtttatgttaacagataagctcaaataagt 30865623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 32848608 - 32848528
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||||| || |||||||||||||| |||||||||||  ||| | ||||||| |||| |||  ||||||||| |||||||||    
T  32848608 tatggaaatatcataagctatttccataagctctccccaacggactcacaaatgcttatgtcagtagataagctcaaataa 32848528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 2767761 - 2767714
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctca 238  Q
    ||||||||||||||||||| |||| | |||||||||||| ||||||||    
T  2767761 tatggacatgtcataagctgtttccacaagctctcctaagcagtctca 2767714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 3289365 - 3289416
Alignment:
Q  192 atggacatgtcataagctatttctataagctctcctaaacagtctcacaagt 243  Q
    |||||||| ||||| |||||||||||||||||||| |||  |||||||||||    
T  3289365 atggacatatcataggctatttctataagctctccaaaatcgtctcacaagt 3289416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 4331084 - 4331029
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    |||||||||||| |||||||||||| |||| |||  |||||| |||||||||||||    
T  4331084 tatggacatgtcttaagctatttctctaagttcttttaaacaatctcacaagtgct 4331029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 8010415 - 8010506
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| ||||||||| || | |||||||||||||||||  || ||||||||| || | |||| | ||||||| |||| |||||| ||||||||    
T  8010415 tatgaacatgtcatgagttgtttctataagctctcctggactgtctcacaaatgtttatgccaatagataagctcacataagtcaatccaaa 8010506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 29052905 - 29052850
Alignment:
Q  217 taagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||| ||||| ||||||||||||||| |||||||||||| |  |||||||||    
T  29052905 taagctcttctaaagagtctcacaagtgcttatgctagtagattagttcaaataag 29052850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 33887893 - 33887968
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||||||||||||||  ||||  ||||  ||||| | |||||||||||||||  |||| ||||||||||||||    
T  33887893 acatgtcataagctattttcataaattctctcaaacaatgtcacaagtgctaatgtcagtaaataaactcaaataa 33887968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 2027806 - 2027764
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctc 237  Q
    ||||||||||||| | |||||||||||||||| ||||||||||    
T  2027806 gacatgtcataagttgtttctataagctctcccaaacagtctc 2027764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 10476128 - 10476054
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||||||| || | |||| |||||||||| |||||||||||| ||||||| ||| | ||||| ||| ||||||||    
T  10476128 catgtcattagatgtttccataagctctcataaacagtctcagaagtgcttatgttggtagaaaaaatcaaataa 10476054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 34939802 - 34939852
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaa 241  Q
    ||||||||||||||||||| ||||  |||||||||| ||||||| ||||||    
T  34939802 tatggacatgtcataagctgtttccgtaagctctccaaaacagtttcacaa 34939852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 3287949 - 3288025
Alignment:
Q  203 ataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||| |||||||||||||||||| |||   ||||||||||||| ||||  ||||||| | |||||||| ||| ||||||    
T  3287949 ataagttatttctataagctctcccaaa---tctcacaagtgcttatgccggtagatatattcaaataaatgactccaaa 3288025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 3775157 - 3775087
Alignment:
Q  170 ataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtg 244  Q
    ||||| |||||||||||    |||| |||||||||||||| |||||||||||||| |  || |||||||||||||    
T  3775157 ataagctgaaaacagtt----tatgcacatgtcataagctgtttctataagctcttccgaatagtctcacaagtg 3775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 10353746 - 10353705
Alignment:
Q  218 aagctctcctaaacagtctcacaagtgctaatgctagtagat 259  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||    
T  10353746 aagctctcccaaacagtctcacaagtgcttatgttagtagat 10353705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 24974035 - 24973946
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||| ||||| |||| ||||||||||| | ||||| ||| ||||||||| |||  || ||||||  |||||||||  ||||||||||    
T  24974035 gacatgttataagttattcctataagctctaccaaacaatcttacaagtgcttatgtcagcagataagttcaaataagctaatccaaata 24973946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 29040174 - 29040093
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||||||||||||  ||| |  | || ||| ||||||||||||||||||| ||| ||||| |||||  ||||||||    
T  29040174 tatggacatgtcataagctgattcaaataactatcccaaacagtctcacaagtgcttatgttagtatataaaaccaaataag 29040093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 31774463 - 31774516
Alignment:
Q  219 agctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||| | ||||||||||| ||||||| ||||  |||||||||||||||||||    
T  31774463 agctcttccaaacagtctcataagtgcttatgccggtagataaactcaaataag 31774516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 2795339 - 2795371
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagt 243  Q
    |||| ||||||||||||||||||||||||||||    
T  2795339 tttccataagctctcctaaacagtctcacaagt 2795371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 5731630 - 5731682
Alignment:
Q  194 ggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    |||||| |||||||||||||  ||||||||| | ||||| |||||||||||||    
T  5731630 ggacatatcataagctattttcataagctctaccaaacactctcacaagtgct 5731682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 6742895 - 6742951
Alignment:
Q  217 taagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||||  || ||||||||||||| | |||||||||| ||| |||||||||||    
T  6742895 taagctctccggaatagtctcacaagtgattatgctagtaggtaagctcaaataagt 6742951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 31583737 - 31583828
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaat 283  Q
    |||||||||||||| |||  |||  ||||||||||| ||||||||||| ||| ||| ||||| ||||| || || |||||||  |||||||||    
T  31583737 tatggacatgtcattagcggtttaaataagctctccaaaacagtctca-aagggcttatgcttgtagacaagctgaaataagctaatccaaat 31583828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 282
Target Start/End: Complemental strand, 25459654 - 25459551
Alignment:
Q  178 aaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaat 277  Q
    ||||||| |||||| |||||||| ||||| || ||||| |||||||| | ||||| ||||||||||||| |||||||| ||||| ||||||||| | |||    
T  25459654 aaaacagcttatgt-tggacatgacataatctgtttctctaagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaat 25459556  T
Q  278 ccaaa 282  Q
    |||||    
T  25459555 ccaaa 25459551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 21872307 - 21872216
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||||||||||||  | ||||| | | ||||||||||||||||||| |||  |||||||||  |||||||||| ||||||||    
T  21872307 tatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaa 21872216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 37273192 - 37273273
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||||||||||||||| | |||| ||||||||||| |||||||||||| |||||| |||||| || ||||  |||||||||    
T  37273192 tatggacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttatgctaataaataagttcaaataag 37273273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 11253530 - 11253650
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||||| ||||| | ||||||||||||||  ||    |||||||||| | ||| |||||  ||| | |||||||||| |||||||| ||||||||||    
T  11253530 gagcttagggaaataggctgaaaacagtttatagat----atgtcataagttgtttttataaattctgccaaacagtctctcaagtgcttatgctagtag 11253625  T
Q  258 ataaactcaaataagtgaatccaaa 282  Q
    |||| ||||||||||| ||| ||||    
T  11253626 ataatctcaaataagtcaattcaaa 11253650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 24624250 - 24624338
Alignment:
Q  169 aataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataa 261  Q
    |||||| |||||||||||||||    ||||||||||||||| |||  ||||||||| | ||||||||| |||||||||||||  |||||||||    
T  24624250 aataagctgaaaacagtttatg----gacatgtcataagctgttttcataagctcttccaaacagtcttacaagtgctaatgtgagtagataa 24624338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 44014810 - 44014719
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| ||| |||||||||| |||  ||||| | ||  ||||||||||||||||| | |||||||||||||||||||||||||  ||||||||    
T  44014810 tatgaacaggtcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaa 44014719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 3775858 - 3775772
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||| ||||| | |||||||||||||| | ||||||||| |||| || | |||| ||||||||||||||||||||  ||||||||    
T  3775858 acatgtaataagttgtttctataagctctgccaaacagtctaacaattgtttatgccagtagataaactcaaataaggcaatccaaa 3775772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 45590734 - 45590800
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||  ||||| |||| ||| ||||    
T  45590734 ataagctctcccaaacagtctcacaagtgcttatgctagtagataagttcaaaaaagtcaattcaaa 45590800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 24603764 - 24603683
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||| |||||||||| || |||| ||||| ||||| ||||||||||| | ||||| ||||||||||| || ||||||||||    
T  24603764 tatgggcatgtcataaactgtttcaataagttctcccaaacagtctcagaggtgcttatgctagtagaaaacctcaaataag 24603683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 52323925 - 52323819
Alignment:
Q  168 aaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaa 267  Q
    ||||||||||||||||| |    ||||||| ||||||||  |||||| ||||||||||  |||||||||  |||||||| ||| |||||||| |||||||    
T  52323925 aaataagttgaaaacagct----tatggacgtgtcataaattatttcaataagctctcacaaacagtcttgcaagtgcttatgttagtagatcaactcaa 52323830  T
Q  268 ataagtgaatc 278  Q
     ||||| ||||    
T  52323829 ttaagtcaatc 52323819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 659872 - 659820
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagt 243  Q
    ||||||||||||||||||| ||||||| |||||||  ||||||||||||||||    
T  659872 tatggacatgtcataagctgtttctattagctctcacaaacagtctcacaagt 659820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 27796000 - 27795944
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    |||||||||| |||||||| ||||||||||| |||| ||||||||| ||||||||||    
T  27796000 ataagctctcttaaacagtttcacaagtgcttatgccagtagataagctcaaataag 27795944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 33965500 - 33965412
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatcc 279  Q
    ||||| ||||||||| |||||||| ||||| ||||||||||||||||||| ||| | | |  ||||||||| |||||||| || |||||    
T  33965500 tatgggcatgtcatatgctatttccataaggtctcctaaacagtctcacatgtgtttaagtcagtagataagctcaaatatgtcaatcc 33965412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 41644433 - 41644369
Alignment:
Q  215 tataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatcc 279  Q
    |||||| ||||||||||||| || |||||||| |||||||||||||| |||||| |||| |||||    
T  41644433 tataagttctcctaaacagtgtctcaagtgcttatgctagtagataagctcaaagaagttaatcc 41644369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 49465672 - 49465584
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||| ||||||| |||  ||||| ||||| ||||| | ||||||||||| ||| ||||| ||||||| |||||||| ||||||||||    
T  49465672 acatgtaataagctgttttcataagttctccgaaacaatatcacaagtgcttatggtagtaaataaactgaaataagtcaatccaaata 49465584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 49772680 - 49772616
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagt 255  Q
    ||||||||| ||||||| | |||| |||||||||||||||||||||||| |||| | ||||||||    
T  49772680 tatggacatctcataagttgtttccataagctctcctaaacagtctcactagtgtttatgctagt 49772616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 42530315 - 42530384
Alignment:
Q  191 tatggacatgtcataa---gctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||||||||||||   |||||||| ||||||| ||  ||||||||||||||||||| ||||||||||    
T  42530315 tatggacatgtcataataagctatttccataagctttctgaaacagtctcacaagtgcttatgctagtag 42530384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 22667468 - 22667562
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgccatta 292  Q
    |||| ||| ||| |||| |||| |||||  ||||||||||||||||||| |||  ||||||||| ||||||||||  |||| ||||| |||||||    
T  22667468 atgttatatgctgtttccataaactctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaataggccatta 22667562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 22724107 - 22724201
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgccatta 292  Q
    |||| ||| ||| |||| |||| |||||  ||||||||||||||||||| |||  ||||||||| ||||||||||  |||| ||||| |||||||    
T  22724107 atgttatatgctgtttccataaactctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaataggccatta 22724201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 8933847 - 8933920
Alignment:
Q  193 tggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactca 266  Q
    ||||||||||||||||||||||  ||| |||||| |||||||||||||  |||| || | |||| |||||||||    
T  8933847 tggacatgtcataagctatttccttaatctctcccaaacagtctcacacatgcttattccagtatataaactca 8933920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 13709823 - 13709766
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    |||| |||||||||| ||||||||||||||| || | |||||||||| ||||||||||    
T  13709823 ataaactctcctaaatagtctcacaagtgcttatcccagtagataaattcaaataagt 13709766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 32103529 - 32103457
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaac 263  Q
    |||||||||||||||| || |||||| ||| || |||||||||| ||||||||| | || || ||||||||||    
T  32103529 tatggacatgtcataaactttttctaaaagatcgcctaaacagtatcacaagtgtttatactggtagataaac 32103457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 49605859 - 49605783
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||||||||| | |||| || | |||||  ||||| |||||||||| || ||||||| ||||||||||||||||    
T  49605859 gacatgtcataagttgtttccatgaactctctcaaacactctcacaagtacttatgctagaagataaactcaaataa 49605783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 10540500 - 10540425
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||||||||||  | |||| ||||||||||||||| ||||| | ||||||| |||  | |||||||||||||||||    
T  10540500 acatgtcataaattgtttccataagctctcctaaagagtctgataagtgcttatgtgaatagataaactcaaataa 10540425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 20192647 - 20192527
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtag 257  Q
    ||||||| | |||| |||||||||||| |    ||||||||||||||||||| |||||||||||||||  | ||||| | | ||||||| |||  | |||    
T  20192647 gagcttatggaaatgagttgaaaacagct----tatggacatgtcataagctgtttctataagctctctcatacagtgtaagaagtgcttatgtcaatag 20192552  T
Q  258 ataaactcaaataagtgaatccaaa 282  Q
    ||||| | |||| ||| ||||||||    
T  20192551 ataaattgaaattagtcaatccaaa 20192527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 22232891 - 22232981
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||||||| | ||||||||| |||| | ||||||| |||||| |||| || | || |||||| |||||||| || ||||||||    
T  22232891 tatggacatgtcataagttgtttctataaactct-caaaacagtttcacaaatgcttattccagcagataagctcaaatacgtcaatccaaa 22232981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 42809371 - 42809442
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| |||||||||  ||||  ||||||||||||||||||||||||||| |  |||||||||  ||||||||    
T  42809371 tttccataagctcttttaaattgtctcacaagtgctaatgctagtagattagttcaaataagacaatccaaa 42809442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 45083191 - 45083242
Alignment:
Q  231 cagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| |||| ||||| ||||||||||||||||| || ||||||||    
T  45083191 cagtctcacaaatgcttatgcttgtagataaactcaaatatgtcaatccaaa 45083242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 45541629 - 45541720
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||| |||||||||||||| |||  ||||| ||| ||||||||||| ||||||| | || | | || |||| ||||||||||| ||||||||    
T  45541629 tatgaacatgtcataagctgttttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctcaaataagtcaatccaaa 45541720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 49465947 - 49465869
Alignment:
Q  192 atggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    |||||||||||||||| | |||||||||||||||  ||| | ||||||||||| | |||||| | ||||| |||||||||    
T  49465947 atggacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 49465869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 52583664 - 52583621
Alignment:
Q  203 ataagctatttctataagctctcctaaacagtctcacaagtgct 246  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||    
T  52583664 ataagctatttctataaactctcctaatccgtctcacaagtgct 52583621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 2100186 - 2100100
Alignment:
Q  196 acatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||||||||| | || ||||||||||  ||||||||||||||||| |   |||   |||||| ||||||||||| ||||||||    
T  2100186 acatgtcataagctgtctccataagctctcacaaacagtctcacaagtgttttagctgaaagataagctcaaataagtcaatccaaa 2100100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 20195038 - 20194952
Alignment:
Q  198 atgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||||||| || |||  ||||||||||  |||||||||||||| |||| |||| || ||||||  |||||||| | ||||||||||    
T  20195038 atgtcataaactgttttcataagctctcacaaacagtctcacaactgcttatgcaagaagataagttcaaataaatcaatccaaata 20194952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 27294424 - 27294498
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatat 285  Q
    ||||||| |||||||  ||||||||||||||||||| |||  | ||||||||||||| ||||  ||| |||||||    
T  27294424 tttctatgagctctctcaaacagtctcacaagtgcttatgacaatagataaactcaagtaagccaattcaaatat 27294498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 36189724 - 36189778
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||||||||||| || |||||| |||| ||||||||||| ||| ||||    
T  36189724 aaacagtctcacaagtgcttatactagtaaataagctcaaataagtcaattcaaa 36189778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 41057244 - 41057294
Alignment:
Q  222 tctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataag 272  Q
    ||||| ||||||||||||||||||| ||||  |||||||| ||||||||||    
T  41057244 tctcccaaacagtctcacaagtgcttatgcatgtagataagctcaaataag 41057294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 44240200 - 44240246
Alignment:
Q  236 tcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||||||| || |||||||||||||||||||||||  |||||||    
T  44240200 tcacaagtgcttatactagtagataaactcaaataagtctatccaaa 44240246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 246
Target Start/End: Complemental strand, 46759092 - 46759062
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgct 246  Q
    |||||||||||||||||||||||||||||||    
T  46759092 ataagctctcctaaacagtctcacaagtgct 46759062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 19679292 - 19679247
Alignment:
Q  239 caagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||||||| ||||||||||||||||||||||||   ||||||||||    
T  19679292 caagtgcttatgctagtagataaactcaaataacccaatccaaata 19679247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 21865564 - 21865597
Alignment:
Q  89 tttcatataagctataagatgttttgataagcta 122  Q
    |||||||||||||||||| |||||||||||||||    
T  21865564 tttcatataagctataagttgttttgataagcta 21865597  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 24158508 - 24158431
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgcc 288  Q
    |||| ||||||||||  ||||||| |||||||| || |||  ||||||||| || |||||||  ||||||||||||||    
T  24158508 tttccataagctctcgcaaacagtttcacaagtacttatgtcagtagataagcttaaataagccaatccaaatatgcc 24158431  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 30923906 - 30923858
Alignment:
Q  195 gacatgtcataagctatttctataagctctcctaaacagtctcacaagtg 244  Q
    ||||||||||||||| |||| ||| |||||| ||||||||||||||||||    
T  30923906 gacatgtcataagctgtttccata-gctctcataaacagtctcacaagtg 30923858  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 584136 - 584195
Alignment:
Q  222 tctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||| ||||||||||||| |  || |||||||||||||| ||||||||||| ||||||||    
T  584136 tctccaaaacagtctcaca-gaacttatgctagtagataagctcaaataagtcaatccaaa 584195  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 1288831 - 1288770
Alignment:
Q  219 agctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    |||||||| ||||||||||||  ||||| |||| ||| ||||| ||||||||||| ||||||||    
T  1288831 agctctcccaaacagtctcac--gtgcttatgccagttgataagctcaaataagtcaatccaaa 1288770  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 12923325 - 12923250
Alignment:
Q  216 ataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgccattagt 294  Q
    ||||||||||| ||||||||||    ||||| ||| |||||||||||||||||||| | |||| ||| ||||| |||||    
T  12923325 ataagctctcccaaacagtctcg---gtgcttatgttagtagataaactcaaataactcaatcaaaacatgcccttagt 12923250  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 31010460 - 31010540
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||||||||||||| | |||||||||||| ||  |||||  ||||||||| || ||| |||||| |||  ||||||||    
T  31010460 tatggacatgtcataagttgtttctataagctttcacaaacacactcacaagttcttatgttagtagttaagttcaaataa 31010540  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 32064468 - 32064500
Alignment:
Q  158 gagcttaggaaaataagttgaaaacagtttatg 190  Q
    ||||||| |||||||||||||||||||||||||    
T  32064468 gagcttatgaaaataagttgaaaacagtttatg 32064500  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 41848691 - 41848635
Alignment:
Q  228 aaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    ||||| ||| ||||||| | ||| |||||||||||||||||||||| |||| |||||    
T  41848691 aaacaatcttacaagtgtttatgttagtagataaactcaaataagtcaatctaaata 41848635  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 43875708 - 43875788
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataa 271  Q
    ||||||||| ||| |||||||||    ||||| | | ||||||||||||||| ||| |||| |||| ||||||||||||||    
T  43875708 tatggacatctcacaagctatttacgcaagctgtaccaaacagtctcacaagagcttatgccagtaaataaactcaaataa 43875788  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 51929826 - 51929890
Alignment:
Q  218 aagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 282  Q
    ||||||| | ||| || |||||||||| | |||||| ||||||| ||||||||||| ||||||||    
T  51929826 aagctcttccaaatagcctcacaagtgtttatgctaatagataagctcaaataagtcaatccaaa 51929890  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 27640 - 27686
Alignment:
Q  197 catgtcataagctatttctataagctctcctaaacagtctcacaagt 243  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  27640 catgtcataagctatttccataagctctcccaaacagtctcagaagt 27686  T

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Target: scaffold0141 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 284
Target Start/End: Complemental strand, 9770 - 9697
Alignment:
Q  211 tttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaata 284  Q
    |||| ||| ||||||| ||||||||||||||||  | ||| |||||||||||||||||||| | |||| |||||    
T  9770 tttccataggctctcccaaacagtctcacaagtatttatgttagtagataaactcaaataaatcaatctaaata 9697  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 20223 - 20294
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaa 262  Q
    |||| ||||| |||||||| |||||||||||||||  ||||||||| ||||| ||| ||||||  |||||||    
T  20223 tatgtacatgccataagctgtttctataagctctcagaaacagtcttacaagggcttatgctaacagataaa 20294  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 33924 - 33843
Alignment:
Q  191 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagt 273  Q
    ||||||||| ||||||||| |||| | || |||||||||||| ||||| ||| ||| |||  |||||||||| ||||||||||    
T  33924 tatggacatatcataagctctttccacaaactctcctaaacaatctca-aagagcttatgtcagtagataaattcaaataagt 33843  T

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