View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20482_low_3 (Length: 246)
Name: NF20482_low_3
Description: NF20482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20482_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 8405658 - 8405890
Alignment:
| Q |
1 |
cataggcagagggacgggttaagtgagcatgatctaatattaagcttagacctactcatggctagcatgctcggtcggttagataagactccaaccgtaa |
100 |
Q |
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| T |
8405658 |
cataggcagagggacgggttaagtgagcatgatctaatattaagcttagacctactcatggctagcatgctcggtcggttagataagactccaactgtaa |
8405757 |
T |
|
| Q |
101 |
aataccatttccatacagagt--tgtgtccattccatgtccctcacctaattattgtcaatcatgggagaatatttgttggggatcatacgcctaaatta |
198 |
Q |
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| T |
8405758 |
aagaccatttccatacagagttgtgtgtccattccatgtccctcacctaattattgttaatcatgggagaatatatgttggggatcatacgcctaaatta |
8405857 |
T |
|
| Q |
199 |
gggtttgacctaacaaaagggataagtccaaac |
231 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
8405858 |
gggtttgacctaacaaaagggataagtccaaac |
8405890 |
T |
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