View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20483_low_18 (Length: 269)
Name: NF20483_low_18
Description: NF20483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20483_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 32942144 - 32941907
Alignment:
| Q |
15 |
actacacatatactctaaaataaattcaagctgtgataacgattggttcgatattagacaagtaaataacacgacatgaccataaatggagtataaagat |
114 |
Q |
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| T |
32942144 |
actacacatatactctaaaataaattcaagctgtgataacgattggttcgatattagacaagtaaataacacgacatgaccataaatggagtataaagat |
32942045 |
T |
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| Q |
115 |
aagaatgaggcattannnnnnnnnaaacaaattaaagcagtgatgcttagttcaactaactttacctaataataataaagttggattgtttacccaaaaa |
214 |
Q |
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| T |
32942044 |
aagaatgaggcatttttttttttaaaacaaattaaagcagtgatgcttagttcaactaactttacctaataataataaagttggattgtttacccaaaaa |
32941945 |
T |
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| Q |
215 |
taaagtaataatgtctcatacagctatatagtgaaaat |
252 |
Q |
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| T |
32941944 |
taaagtaataatgtctcatacaactatatagtgaaaat |
32941907 |
T |
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