View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20483_low_24 (Length: 227)

Name: NF20483_low_24
Description: NF20483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20483_low_24
NF20483_low_24
[»] chr2 (9 HSPs)
chr2 (151-219)||(3597842-3597910)
chr2 (151-219)||(42769710-42769778)
chr2 (151-219)||(14186390-14186458)
chr2 (151-219)||(29846550-29846618)
chr2 (151-219)||(14941996-14942064)
chr2 (151-226)||(1386114-1386189)
chr2 (151-226)||(40277240-40277315)
chr2 (151-219)||(19181656-19181724)
chr2 (151-196)||(3956703-3956748)
[»] chr5 (10 HSPs)
chr5 (145-226)||(8456909-8456990)
chr5 (151-219)||(6257362-6257430)
chr5 (152-219)||(38397706-38397773)
chr5 (151-216)||(37168985-37169050)
chr5 (151-219)||(15631722-15631790)
chr5 (151-219)||(16618522-16618590)
chr5 (151-219)||(39862439-39862507)
chr5 (151-219)||(23218593-23218661)
chr5 (151-194)||(10081280-10081323)
chr5 (174-226)||(36769049-36769101)
[»] chr7 (8 HSPs)
chr7 (151-219)||(44164695-44164763)
chr7 (151-219)||(34707224-34707292)
chr7 (145-219)||(10576781-10576855)
chr7 (176-226)||(41853212-41853262)
chr7 (151-219)||(29238095-29238163)
chr7 (151-219)||(34259626-34259694)
chr7 (151-219)||(29981065-29981133)
chr7 (186-226)||(17303101-17303141)
[»] chr3 (10 HSPs)
chr3 (151-219)||(8950456-8950524)
chr3 (151-226)||(36539733-36539808)
chr3 (146-219)||(21853305-21853378)
chr3 (151-219)||(44994920-44994988)
chr3 (151-219)||(13856207-13856275)
chr3 (186-226)||(10839367-10839407)
chr3 (151-226)||(20382620-20382693)
chr3 (187-226)||(43347324-43347363)
chr3 (146-216)||(40845864-40845934)
chr3 (151-196)||(5391588-5391633)
[»] chr1 (12 HSPs)
chr1 (151-219)||(7742731-7742799)
chr1 (151-219)||(42517246-42517314)
chr1 (151-219)||(47022810-47022878)
chr1 (151-226)||(38859952-38860027)
chr1 (151-219)||(10155968-10156036)
chr1 (151-219)||(48392358-48392426)
chr1 (151-210)||(23908392-23908451)
chr1 (151-210)||(29149510-29149569)
chr1 (154-219)||(5975096-5975161)
chr1 (151-219)||(49902576-49902644)
chr1 (185-227)||(26511620-26511662)
chr1 (186-226)||(10907635-10907675)
[»] chr4 (13 HSPs)
chr4 (151-226)||(17888502-17888577)
chr4 (146-219)||(1535879-1535952)
chr4 (151-226)||(31377491-31377565)
chr4 (151-219)||(20818675-20818743)
chr4 (151-219)||(35019043-35019111)
chr4 (151-219)||(37801216-37801284)
chr4 (154-219)||(36851342-36851407)
chr4 (154-219)||(49284465-49284530)
chr4 (151-226)||(11054557-11054631)
chr4 (152-226)||(19124691-19124765)
chr4 (151-216)||(16338165-16338230)
chr4 (189-226)||(47084113-47084150)
chr4 (156-196)||(46583508-46583548)
[»] chr6 (6 HSPs)
chr6 (151-221)||(34383363-34383433)
chr6 (151-219)||(13627648-13627716)
chr6 (151-219)||(9231806-9231874)
chr6 (151-219)||(24694603-24694671)
chr6 (151-219)||(11084698-11084765)
chr6 (152-219)||(14309752-14309818)
[»] chr8 (9 HSPs)
chr8 (151-219)||(35806902-35806970)
chr8 (151-219)||(22324704-22324772)
chr8 (151-219)||(33934321-33934389)
chr8 (151-219)||(42072536-42072604)
chr8 (151-219)||(21525466-21525534)
chr8 (151-219)||(26021504-26021573)
chr8 (151-219)||(42013980-42014048)
chr8 (184-226)||(2824167-2824209)
chr8 (185-226)||(16591361-16591402)
[»] scaffold0079 (1 HSPs)
scaffold0079 (151-216)||(54630-54695)


Alignment Details
Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 3597842 - 3597910
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  3597842 gggcggttctaaggcccggcgaccccaggcactcgcccgggctccgggccaaattttttgcaatttctt 3597910  T

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Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 42769710 - 42769778
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||  | |||||||||||||||||||    
T  42769710 gggcggttctaaggcccggcgaccccgggcactcgcccgggctccgggccaaattttttgcaatttctt 42769778  T

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Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 14186390 - 14186458
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||  | |||||||||| ||||||||    
T  14186390 gggcggttctaaggcccggcgaccccaggcactcgcccgagctccgggccaaattttttgtaatttctt 14186458  T

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Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 29846618 - 29846550
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||  | |||||||||||||||||||    
T  29846618 gggcggttctaaggcccgacgaccccgggcactcgcccgggctccgggccaaattttttgcaatttctt 29846550  T

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Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 14941996 - 14942064
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||  ||||||||| | |||||||||||||||||  | |||||||||||||||||||    
T  14941996 gggcggttctaaggctcggcgaccccggacactcgcccgggctccgggccaaattttttgcaatttctt 14942064  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 1386114 - 1386189
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||| |||  | ||||||| ||||||||||||||||| |||| || |||||||||||||||||| ||||    
T  1386114 gggcggttctatggctcgacgaccccgggcactcgcccgggctcggacccaatttttttgcaatttcttatgtaaa 1386189  T

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Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 40277240 - 40277315
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    |||||||||||||||| ||||||||| |||||| | ||||||||||  | |||||||||||||||| |||| ||||    
T  40277240 gggcggttctaaggcccggcgaccccgggcacttgtccgggctccgggccaaattttttgcaattttttatgtaaa 40277315  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 19181724 - 19181656
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| | |||||||| |||||  |  | |||||||||||||||||||    
T  19181724 gggcggttctaaggcccggcgaccccggacactcgcctgggctatgggccaaattttttgcaatttctt 19181656  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 3956748 - 3956703
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccg 196  Q
    ||||||||||| |||| || |||||| |||||||||||||||||||    
T  3956748 gggcggttctatggcccggtgaccccgggcactcgcccgggctccg 3956703  T

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Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 8456909 - 8456990
Alignment:
Q  145 gaccacgggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||| ||||||||||| |||| |||||||||| |||||||||||||||||| || ||||||||| ||||||||||| ||||    
T  8456909 gaccatgggcggttctatggcccggcgaccccatgcactcgcccgggctccggcccaaatttttttcaatttcttatgtaaa 8456990  T

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Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 6257362 - 6257430
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||  | |||||||||||||||||||    
T  6257362 gggcggttctaaggcccggcgaccccgggcactcgcccgggctccgggccaaattttttgcaatttctt 6257430  T

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Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 38397773 - 38397706
Alignment:
Q  152 ggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||  | |||||||||||||||||||    
T  38397773 ggcggttctaaggcccggcgaccccgggcactcgcccgggctccgggccaaattttttgcaatttctt 38397706  T

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Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 37168985 - 37169050
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaattt 216  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||||  | ||||||||||||||||    
T  37168985 gggcggttctaaggcccggcgaccccgggcacttgcccgggctccgggccaaattttttgcaattt 37169050  T

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Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 15631790 - 15631722
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||   | ||||||||| |||||||||    
T  15631790 gggcggttctaaggcccggcgaccccgggcactcgcccgggctccaggccaaattttttacaatttctt 15631722  T

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Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 16618522 - 16618590
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||  | ||||||||| |||||||||    
T  16618522 gggcggttctaaggcccggcgaccccgggcactcgtccgggctccgggccaaattttttacaatttctt 16618590  T

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Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 39862439 - 39862507
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||  | || ||||||||||||||||    
T  39862439 gggcggttctaaggcccggcgaccccgggcactcgcccgagctccgggccaatttttttgcaatttctt 39862507  T

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Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 23218661 - 23218593
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||| ||| |||||||||||||| ||||  | ||| |||||||||||||||    
T  23218661 gggcggttctaaggcccggcgatcccgggcactcgcccgggttccgggccaaagtttttgcaatttctt 23218593  T

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Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 194
Target Start/End: Complemental strand, 10081323 - 10081280
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctc 194  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||    
T  10081323 gggcggttctatggcccggcgatcccaggcactcgcccgggctc 10081280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 36769049 - 36769101
Alignment:
Q  174 cccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    |||||||||| | |||| ||||| || ||||||||||||||||||||| ||||    
T  36769049 cccaggcacttgtccggactccggcccaaattttttgcaatttcttatgtaaa 36769101  T

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Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 44164695 - 44164763
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||  | |||||||||||||||||||    
T  44164695 gggcggttctaaggcccggcgaccccgggcactcgcccgggctccgggccaaattttttgcaatttctt 44164763  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 34707292 - 34707224
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||  | |||||||||||||||||||    
T  34707292 gggcggttctaagacccggcgaccccgggcactcgcccgggctccgggccaaattttttgcaatttctt 34707224  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 10576855 - 10576781
Alignment:
Q  145 gaccacgggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||| |||||||||||||| | ||||||||| ||||||| |||||||||||  | |||||||||||||||||||    
T  10576855 gaccaggggcggttctaaggtccggcgaccccgggcactcacccgggctccgggccaaattttttgcaatttctt 10576781  T

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Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 41853262 - 41853212
Alignment:
Q  176 caggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  41853262 caggcactcgcccgggctccggcccaaattttttgcaatttcttatttaaa 41853212  T

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Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 29238095 - 29238163
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||  | || ||||||||||||||||    
T  29238095 gggcggttctaaggcccggcaaccccgggcactcgcccgggctccgggccaatttttttgcaatttctt 29238163  T

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Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 34259694 - 34259626
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| |||||| || |||||||||||||||||||  | || ||||||||||||||||    
T  34259694 gggcggttctaaggcccggcgactccgggcactcgcccgggctccgggccaatttttttgcaatttctt 34259626  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 29981065 - 29981133
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||||||||||| || ||||||| | |||||||||||||||||||  | || | ||||||||||||||    
T  29981065 gggcggttctaagacccggcgacctcgggcactcgcccgggctccgggccaattcttttgcaatttctt 29981133  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 17303101 - 17303141
Alignment:
Q  186 cccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    |||||||||||||| || |||||||||||||||||| ||||    
T  17303101 cccgggctccgacccaatttttttgcaatttcttatgtaaa 17303141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 8950456 - 8950524
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |  | |||||||||||||||||||    
T  8950456 gggcggttctaaggcctggcgaccccgggcactcgcccgggctctgggccaaattttttgcaatttctt 8950524  T

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Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 36539808 - 36539733
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    |||||||||||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||||| ||||    
T  36539808 gggcggttctaaggcctggcgagctcgggcagtcgcccgggctccggcctaaattttatgcaatttcttatgtaaa 36539733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 21853378 - 21853305
Alignment:
Q  146 accacgggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||| |||||||||||||||| ||||||||| |||||||| ||||||||||  | |||||||||||||||||||    
T  21853378 accaggggcggttctaaggcccggcgaccccgggcactcggccgggctccgggccaaattttttgcaatttctt 21853305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 44994920 - 44994988
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| || |||||| |||||||||  | |||||||||||||||||||    
T  44994920 gggcggttctaaggcccggcgaccccgggtactcgctcgggctccgggccaaattttttgcaatttctt 44994988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 13856275 - 13856207
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||  |||||| ||||||||||||  | ||||||||| |||||||||    
T  13856275 gggcggttctaaggcccggcgacccagggcacttgcccgggctccgggccaaatttttttcaatttctt 13856207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 10839367 - 10839407
Alignment:
Q  186 cccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  10839367 cccgggctccgacccaaattttttgcaatttcttatgtaaa 10839407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 20382693 - 20382620
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||| |||| ||||||||| |||||| |||||||||||| || |||||||||  |||||||||| ||||    
T  20382693 gggcggttctatggcc-ggcgaccccgggcacttgcccgggctccggcccaaatttttt-taatttcttatgtaaa 20382620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 226
Target Start/End: Original strand, 43347324 - 43347363
Alignment:
Q  187 ccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  43347324 ccgggctccgacccaaattttttgcaatttcttatgtaaa 43347363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 40845864 - 40845934
Alignment:
Q  146 accacgggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaattt 216  Q
    |||| |||||||||||||||| ||||||| | |||| ||||||||| ||||    ||||||||||||||||    
T  40845864 accaggggcggttctaaggcccggcgacctcgggcattcgcccgggttccgggtcaaattttttgcaattt 40845934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 5391633 - 5391588
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccg 196  Q
    ||||||||||| |||| ||||||||  |||||||||||||||||||    
T  5391633 gggcggttctatggcccggcgaccctgggcactcgcccgggctccg 5391588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 7742731 - 7742799
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| | || ||||||||||||||||    
T  7742731 gggcggttctaaggcccggcgaccccgggcactcgcccgggctccgagcaaatttttttgcaatttctt 7742799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 42517246 - 42517314
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||  | |||||||||||||||||||    
T  42517246 gggcggttctaaggcccggcgaccccgggcactcgcccgggctccgggccaaattttttgcaatttctt 42517314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 47022878 - 47022810
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||  | |||||||||||||||||||    
T  47022878 gggcggttctaaggcccggcgaccccgggcactcgcccgggctccgggccaaattttttgcaatttctt 47022810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 38860027 - 38859952
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||| || ||||||||| ||||||||||| ||||    
T  38860027 gggcggttctatggcccggcgaccccgggcactcgcccgggctccggcccaaatttttttcaatttcttatgtaaa 38859952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 10155968 - 10156036
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||  | || ||||||||||||||||    
T  10155968 gggcggttctaaggcccggcgaccccgggcactcgcccgggctccgggccaatttttttgcaatttctt 10156036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 48392358 - 48392426
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||| | || ||||||||||||||||    
T  48392358 gggcggttctaaggcccggcgacctcgggcactcgcccgggctccgagccaatttttttgcaatttctt 48392426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 23908451 - 23908392
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttg 210  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||    
T  23908451 gggcggttctaaggcccggcgaccccaggcactcgcccgggctccgggccaaattttttg 23908392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 29149510 - 29149569
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttg 210  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  29149510 gggcggttttaaggcctggcgaccccaggcactcgcccgggctccggaccaaattttttg 29149569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 5975161 - 5975096
Alignment:
Q  154 cggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||||||||||| ||||||||| |||||||||||||||||||  | ||||||||| |||||||||    
T  5975161 cggttctaaggcccggcgaccccgggcactcgcccgggctccgggccaaatttttttcaatttctt 5975096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 49902644 - 49902576
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||| | |||||| || ||||||||| |||||||||  | |||||||||||||||||||    
T  49902644 gggcggttctaaggtccggcgactccgggcactcgctcgggctccgggccaaattttttgcaatttctt 49902576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 26511620 - 26511662
Alignment:
Q  185 gcccgggctccgacctaaattttttgcaatttcttatttaaac 227  Q
    |||||||||||| ||||| |||||||||||||||||| |||||    
T  26511620 gcccgggctccggcctaatttttttgcaatttcttatgtaaac 26511662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 10907635 - 10907675
Alignment:
Q  186 cccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||| || ||||||||||||||||||||| ||||    
T  10907635 cccgggctccggcccaaattttttgcaatttcttatgtaaa 10907675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 17888502 - 17888577
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||| || ||||||||| ||||||||||| ||||    
T  17888502 gggcggttctatggccaggcgaccccgggcactcgcccgggctccggcccaaatttttttcaatttcttatgtaaa 17888577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 1535952 - 1535879
Alignment:
Q  146 accacgggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||| |||||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||||    
T  1535952 accaggggcggttctaaggcccggcgacccggggcactcgcccgggctccgggccaaattttttgcaatttctt 1535879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 31377565 - 31377491
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||| || ||||||||| ||||||||||| ||||    
T  31377565 gggcggttctatggcccggcgaccccgggcactcgcccgggctccggcccaaatttttt-caatttcttatgtaaa 31377491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 20818743 - 20818675
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||||||||| |  | |||||| || ||||||||||||||||| |||| |||||||||||||||||||    
T  20818743 gggcggttctatgatccggcgactccgggcactcgcccgggctctgacccaaattttttgcaatttctt 20818675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 35019111 - 35019043
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||  ||||||||||||||||| |  | ||||||||| |||||||||    
T  35019111 gggcggttctaaggcccggcgaccctgggcactcgcccgggctctgggccaaattttttacaatttctt 35019043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 37801216 - 37801284
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| | ||| | |||||| ||| ||||||||||  |||||||||||||||||||||    
T  37801216 gggcggttctaaggcccgacgatctcaggcattcgtccgggctccgggctaaattttttgcaatttctt 37801284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 36851342 - 36851407
Alignment:
Q  154 cggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||| |||||||  |||||||| |||||||||| ||||||||  | |||||||||||||||||||    
T  36851342 cggttttaaggcccagcgaccccgggcactcgcctgggctccgggccaaattttttgcaatttctt 36851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 49284530 - 49284465
Alignment:
Q  154 cggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||  |||| ||| |||||||| ||||||||||  | |||||||||||||||||||    
T  49284530 cggttctaaggcccagcgaacccgggcactcgtccgggctccgggccaaattttttgcaatttctt 49284465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 11054631 - 11054557
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||| |||| |||||||||  |||||| |||||||||||  |  |||||||||||||||||||| ||||    
T  11054631 gggcggttctatggcccggcgaccccgagcactcacccgggctccggtc-caattttttgcaatttcttatgtaaa 11054557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 19124691 - 19124765
Alignment:
Q  152 ggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||||| | |||||  | ||||| | || ||||||||| ||||| |||||||||||||||||| ||||    
T  19124691 ggcggttctaaggtccggcgagtctaggcagttgcgcgggctccggcctaatttttttgcaatttcttatgtaaa 19124765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 16338165 - 16338230
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaattt 216  Q
    |||||||||||||||| ||||||||| |||| ||||||||  ||||  | || |||||||||||||    
T  16338165 gggcggttctaaggcccggcgaccccgggcattcgcccggattccgggccaatttttttgcaattt 16338230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 47084150 - 47084113
Alignment:
Q  189 gggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  47084150 gggctccggcctaaattttttgcaatttcttatgtaaa 47084113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 46583508 - 46583548
Alignment:
Q  156 gttctaaggcctggcgaccccaggcactcgcccgggctccg 196  Q
    ||||||||| | ||||||||| |||||||||||||||||||    
T  46583508 gttctaaggtccggcgaccccgggcactcgcccgggctccg 46583548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 34383363 - 34383433
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttcttat 221  Q
    ||||||||||| |||||||||||||| || | |||||||||||||| ||||||||||| ||||||||||||    
T  34383363 gggcggttctatggcctggcgaccccgggtattcgcccgggctccggcctaaatttttcgcaatttcttat 34383433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 13627716 - 13627648
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||  | |||||||||||||||||||    
T  13627716 gggcggttctaaggcccggcgaccccaagcactcgtccgggctccgggccaaattttttgcaatttctt 13627648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 9231806 - 9231874
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||  | || ||||||||||||||||    
T  9231806 gggcggttctaaggctcggcgaccccgggcactcgcccgggctccgggccaatttttttgcaatttctt 9231874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 24694603 - 24694671
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||| ||||  |||||||||||||||||||  | |||||||||||||||||||    
T  24694603 gggcggttctaaggcccggcaaccctgggcactcgcccgggctccgggccaaattttttgcaatttctt 24694671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 11084765 - 11084698
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| || |||||| |||| ||||||||| ||||| | || ||||||||||||||||    
T  11084765 gggcggttctaaggcccggtgaccccgggca-tcgcccgggttccgagccaatttttttgcaatttctt 11084698  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 14309752 - 14309818
Alignment:
Q  152 ggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||||| ||||||| ||||||||||| |||||||||||  || | || |||||||||||||||||||    
T  14309752 ggcggttataaggcccggcgaccccagacactcgcccggtttcgggcc-aaattttttgcaatttctt 14309818  T

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Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 35806970 - 35806902
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||  | |||||||||||||||||||    
T  35806970 gggcggttctaaggcccggcgaccccgggcactcggccgggctccgggccaaattttttgcaatttctt 35806902  T

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Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 22324772 - 22324704
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||  | |||||||||| ||||||||    
T  22324772 gggcggttctaaggcccggcaaccccgggcactcgcccgggctccgggccaaattttttgtaatttctt 22324704  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 33934321 - 33934389
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||   | |||||||||||||||||||    
T  33934321 gggcggttttaaggcccggcgaccccgggcactcgcccgggctccaggccaaattttttgcaatttctt 33934389  T

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Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 42072604 - 42072536
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||  | || ||||||||||||||||    
T  42072604 gggcggttctatggcccggcgaccccgggcactcgcccgggctccgggccaatttttttgcaatttctt 42072536  T

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Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 21525534 - 21525466
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| || |||||| |||||||||| ||||||||    |||||||||||||||||||    
T  21525534 gggcggttctaaggcccggtgaccccgggcactcgccagggctccgggtcaaattttttgcaatttctt 21525466  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 26021573 - 26021504
Alignment:
Q  151 gggcggttctaaggcct-ggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    ||||||||||||||||  || |||||| |||||| ||||||||||||  | |||||||||||||||||||    
T  26021573 gggcggttctaaggccccggtgaccccgggcactagcccgggctccgtgccaaattttttgcaatttctt 26021504  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 42014048 - 42013980
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaatttctt 219  Q
    |||||||||||||||| ||||||||| |||||| | ||||| | ||  | |||||||||||||||||||    
T  42014048 gggcggttctaaggcccggcgaccccgggcacttgtccgggtttcgggccaaattttttgcaatttctt 42013980  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 2824167 - 2824209
Alignment:
Q  184 cgcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||    
T  2824167 cgcccgggctccgacctgaattttttgcaattttttatgtaaa 2824209  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 16591361 - 16591402
Alignment:
Q  185 gcccgggctccgacctaaattttttgcaatttcttatttaaa 226  Q
    ||||||| |||| |||||||||||||||||||||||| ||||    
T  16591361 gcccgggttccggcctaaattttttgcaatttcttatgtaaa 16591402  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 54695 - 54630
Alignment:
Q  151 gggcggttctaaggcctggcgaccccaggcactcgcccgggctccgacctaaattttttgcaattt 216  Q
    |||||||||||||||| ||||||||| |||| ||||||||  ||||  | || |||||||||||||    
T  54695 gggcggttctaaggcccggcgaccccgggcattcgcccggattccgggccaatttttttgcaattt 54630  T

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