View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20483_low_7 (Length: 493)

Name: NF20483_low_7
Description: NF20483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20483_low_7
NF20483_low_7
[»] chr6 (68 HSPs)
chr6 (45-477)||(3216896-3217329)
chr6 (319-387)||(33498640-33498708)
chr6 (263-332)||(27894053-27894122)
chr6 (319-375)||(34939546-34939602)
chr6 (410-472)||(29274301-29274363)
chr6 (263-332)||(6647394-6647463)
chr6 (410-474)||(10452432-10452496)
chr6 (319-371)||(20377901-20377953)
chr6 (411-462)||(2027479-2027530)
chr6 (425-476)||(2514634-2514685)
chr6 (410-477)||(7713956-7714023)
chr6 (410-477)||(9027508-9027575)
chr6 (410-477)||(22742297-22742364)
chr6 (410-445)||(27693511-27693546)
chr6 (410-477)||(32386635-32386702)
chr6 (405-475)||(2034506-2034575)
chr6 (410-464)||(11363440-11363494)
chr6 (319-376)||(2460132-2460189)
chr6 (319-376)||(7931707-7931764)
chr6 (319-376)||(9027610-9027667)
chr6 (410-443)||(27595639-27595672)
chr6 (319-376)||(30863278-30863335)
chr6 (253-306)||(31624123-31624176)
chr6 (328-376)||(7785734-7785782)
chr6 (319-387)||(32171364-32171432)
chr6 (319-370)||(1669779-1669830)
chr6 (410-477)||(4006645-4006712)
chr6 (410-469)||(10749300-10749358)
chr6 (410-477)||(20671937-20672004)
chr6 (268-307)||(27889833-27889872)
chr6 (337-376)||(27909637-27909676)
chr6 (418-477)||(29269827-29269886)
chr6 (410-477)||(32386171-32386238)
chr6 (319-374)||(32577967-32578022)
chr6 (331-373)||(281841-281883)
chr6 (253-306)||(1575783-1575837)
chr6 (285-335)||(2023402-2023452)
chr6 (410-440)||(2732311-2732341)
chr6 (423-477)||(4248889-4248943)
chr6 (411-469)||(24836272-24836330)
chr6 (411-469)||(27893986-27894044)
chr6 (317-387)||(32386085-32386155)
chr6 (427-477)||(33259747-33259797)
chr6 (433-475)||(33416318-33416360)
chr6 (425-470)||(2027891-2027936)
chr6 (322-387)||(7945868-7945933)
chr6 (412-477)||(11340699-11340764)
chr6 (410-475)||(21959661-21959726)
chr6 (410-443)||(27713472-27713505)
chr6 (410-475)||(29940729-29940794)
chr6 (321-374)||(33832256-33832309)
chr6 (437-478)||(34862924-34862965)
chr6 (319-387)||(733158-733226)
chr6 (410-462)||(1402942-1402994)
chr6 (413-476)||(1497912-1497976)
chr6 (330-374)||(3155209-3155253)
chr6 (348-376)||(6536979-6537007)
chr6 (328-376)||(9667975-9668023)
chr6 (287-335)||(9763564-9763612)
chr6 (192-252)||(10016701-10016761)
chr6 (348-376)||(20512654-20512682)
chr6 (410-469)||(22691592-22691649)
chr6 (410-470)||(24476540-24476600)
chr6 (287-335)||(25100047-25100095)
chr6 (410-442)||(27615345-27615377)
chr6 (273-333)||(31583685-31583745)
chr6 (425-477)||(32975909-32975961)
chr6 (319-375)||(34939777-34939833)
[»] chr2 (74 HSPs)
chr2 (410-477)||(25609727-25609794)
chr2 (411-475)||(3423841-3423905)
chr2 (410-470)||(16946980-16947040)
chr2 (410-470)||(17017645-17017705)
chr2 (254-383)||(40279362-40279493)
chr2 (410-477)||(9478230-9478297)
chr2 (410-477)||(17952773-17952840)
chr2 (410-476)||(18962110-18962176)
chr2 (322-387)||(41817189-41817254)
chr2 (319-376)||(43065431-43065488)
chr2 (318-378)||(10285890-10285950)
chr2 (425-477)||(36852396-36852448)
chr2 (321-377)||(44606093-44606149)
chr2 (418-477)||(4026748-4026807)
chr2 (410-477)||(28902008-28902075)
chr2 (410-477)||(28933755-28933822)
chr2 (410-477)||(37053525-37053592)
chr2 (252-330)||(680512-680590)
chr2 (411-477)||(3102624-3102690)
chr2 (426-476)||(5045245-5045295)
chr2 (414-476)||(7282950-7283012)
chr2 (253-330)||(9595267-9595344)
chr2 (410-467)||(23143050-23143107)
chr2 (410-467)||(23554840-23554897)
chr2 (420-477)||(31461369-31461426)
chr2 (319-376)||(35378997-35379054)
chr2 (319-380)||(43456688-43456749)
chr2 (319-387)||(9556260-9556328)
chr2 (410-478)||(10143102-10143170)
chr2 (253-333)||(44606094-44606174)
chr2 (423-477)||(3100077-3100132)
chr2 (410-477)||(3673738-3673805)
chr2 (253-332)||(8017441-8017520)
chr2 (253-332)||(9556246-9556325)
chr2 (414-477)||(11344360-11344423)
chr2 (288-335)||(32634339-32634386)
chr2 (410-477)||(35459841-35459908)
chr2 (412-467)||(40837502-40837557)
chr2 (410-441)||(43173189-43173220)
chr2 (414-477)||(44606164-44606227)
chr2 (321-375)||(787365-787419)
chr2 (253-303)||(1494430-1494480)
chr2 (410-476)||(2416245-2416311)
chr2 (411-477)||(28039405-28039471)
chr2 (407-477)||(29729856-29729926)
chr2 (319-369)||(30538154-30538204)
chr2 (414-472)||(32098384-32098442)
chr2 (190-252)||(39622029-39622091)
chr2 (278-383)||(40279292-40279398)
chr2 (319-381)||(41809226-41809288)
chr2 (410-467)||(3458598-3458655)
chr2 (410-443)||(11513863-11513896)
chr2 (322-383)||(28039316-28039377)
chr2 (410-443)||(31740031-31740064)
chr2 (410-475)||(33192126-33192191)
chr2 (412-477)||(34054975-34055040)
chr2 (410-443)||(34339871-34339904)
chr2 (319-376)||(34652017-34652074)
chr2 (278-335)||(40279271-40279328)
chr2 (431-476)||(41039739-41039784)
chr2 (428-477)||(44443251-44443300)
chr2 (260-332)||(1939323-1939395)
chr2 (408-472)||(5133708-5133772)
chr2 (417-477)||(7825183-7825243)
chr2 (411-443)||(10646362-10646394)
chr2 (423-471)||(19977898-19977946)
chr2 (425-477)||(28677739-28677791)
chr2 (327-383)||(29316764-29316820)
chr2 (253-305)||(33256774-33256826)
chr2 (414-470)||(37033982-37034038)
chr2 (410-478)||(38259735-38259803)
chr2 (410-470)||(39983281-39983340)
chr2 (410-477)||(43808507-43808574)
chr2 (287-335)||(43985021-43985069)
[»] scaffold0024 (3 HSPs)
scaffold0024 (411-476)||(27508-27573)
scaffold0024 (410-470)||(21350-21410)
scaffold0024 (410-470)||(58875-58935)
[»] chr3 (66 HSPs)
chr3 (410-475)||(1395604-1395669)
chr3 (414-477)||(16790432-16790495)
chr3 (410-477)||(33307652-33307719)
chr3 (414-476)||(3757980-3758042)
chr3 (319-383)||(37273159-37273223)
chr3 (253-332)||(24624217-24624296)
chr3 (253-332)||(39602194-39602273)
chr3 (414-477)||(44374720-44374783)
chr3 (411-476)||(20192679-20192744)
chr3 (319-375)||(48048963-48049019)
chr3 (417-477)||(49772747-49772807)
chr3 (410-477)||(27792803-27792870)
chr3 (328-387)||(43875486-43875545)
chr3 (253-307)||(5391911-5391965)
chr3 (265-335)||(36887508-36887578)
chr3 (322-376)||(43115088-43115142)
chr3 (418-475)||(23530265-23530322)
chr3 (425-478)||(36101498-36101551)
chr3 (425-478)||(36139808-36139861)
chr3 (328-373)||(36200131-36200176)
chr3 (410-463)||(37689456-37689509)
chr3 (427-476)||(42039091-42039140)
chr3 (414-475)||(52413197-52413258)
chr3 (425-477)||(12923412-12923464)
chr3 (270-334)||(32064444-32064508)
chr3 (321-369)||(41724251-41724299)
chr3 (410-477)||(905042-905109)
chr3 (410-477)||(20349548-20349615)
chr3 (410-477)||(22232757-22232824)
chr3 (410-477)||(28779287-28779354)
chr3 (410-469)||(32703077-32703136)
chr3 (253-332)||(37273141-37273220)
chr3 (426-477)||(41028939-41028990)
chr3 (410-477)||(49586988-49587054)
chr3 (319-369)||(3015824-3015874)
chr3 (253-307)||(3015827-3015881)
chr3 (253-307)||(24281079-24281133)
chr3 (413-443)||(25195389-25195419)
chr3 (319-373)||(27290882-27290936)
chr3 (253-335)||(34382946-34383028)
chr3 (322-376)||(42745070-42745124)
chr3 (426-476)||(49546575-49546625)
chr3 (319-376)||(11039320-11039377)
chr3 (319-376)||(21574522-21574579)
chr3 (319-376)||(31010434-31010491)
chr3 (410-443)||(32555053-32555086)
chr3 (337-386)||(37825144-37825193)
chr3 (412-477)||(38462212-38462277)
chr3 (410-467)||(42809242-42809299)
chr3 (418-467)||(48397587-48397636)
chr3 (410-475)||(53736185-53736250)
chr3 (191-251)||(2304202-2304262)
chr3 (348-376)||(5292530-5292558)
chr3 (348-376)||(13371149-13371177)
chr3 (411-463)||(15304420-15304472)
chr3 (348-376)||(21862185-21862213)
chr3 (410-470)||(21872343-21872403)
chr3 (319-387)||(24624231-24624299)
chr3 (191-247)||(27795944-27796000)
chr3 (328-376)||(29771870-29771918)
chr3 (411-475)||(37788794-37788857)
chr3 (348-376)||(38462313-38462341)
chr3 (287-335)||(39980733-39980781)
chr3 (414-470)||(40122828-40122884)
chr3 (285-329)||(41671320-41671364)
chr3 (348-376)||(45432949-45432977)
[»] scaffold0590 (1 HSPs)
scaffold0590 (410-477)||(1146-1213)
[»] scaffold0275 (1 HSPs)
scaffold0275 (410-477)||(2762-2829)
[»] chr8 (44 HSPs)
chr8 (412-475)||(41620365-41620428)
chr8 (319-376)||(6950354-6950411)
chr8 (412-476)||(4558730-4558794)
chr8 (187-251)||(9700080-9700144)
chr8 (410-467)||(1470928-1470985)
chr8 (410-477)||(3645888-3645955)
chr8 (410-477)||(7026662-7026729)
chr8 (418-477)||(14482133-14482192)
chr8 (410-445)||(29262946-29262981)
chr8 (410-476)||(787178-787244)
chr8 (319-385)||(11183568-11183634)
chr8 (411-477)||(26215427-26215493)
chr8 (321-371)||(27119912-27119962)
chr8 (410-476)||(29973013-29973079)
chr8 (415-477)||(42597332-42597394)
chr8 (319-376)||(30918145-30918201)
chr8 (418-478)||(7646136-7646196)
chr8 (319-375)||(14949899-14949955)
chr8 (323-375)||(25869251-25869303)
chr8 (319-383)||(30259139-30259203)
chr8 (418-466)||(31315533-31315581)
chr8 (425-477)||(35298565-35298617)
chr8 (425-477)||(40356802-40356854)
chr8 (187-254)||(10075480-10075547)
chr8 (329-376)||(13000415-13000462)
chr8 (353-388)||(44401581-44401616)
chr8 (423-477)||(21653012-21653066)
chr8 (253-335)||(26473736-26473818)
chr8 (411-477)||(29417777-29417842)
chr8 (410-475)||(1112786-1112851)
chr8 (410-443)||(2100770-2100803)
chr8 (191-248)||(10062072-10062129)
chr8 (411-468)||(13561385-13561442)
chr8 (319-376)||(26479817-26479874)
chr8 (411-468)||(27728094-27728151)
chr8 (278-335)||(35749579-35749636)
chr8 (279-335)||(4762513-4762569)
chr8 (319-375)||(8066751-8066807)
chr8 (253-313)||(11770995-11771055)
chr8 (418-477)||(26716518-26716575)
chr8 (410-477)||(26717188-26717253)
chr8 (326-370)||(27158109-27158153)
chr8 (319-375)||(30191122-30191178)
chr8 (425-477)||(35534948-35535000)
[»] chr4 (61 HSPs)
chr4 (414-477)||(7022599-7022662)
chr4 (411-457)||(11917510-11917556)
chr4 (411-477)||(42321952-42322018)
chr4 (416-477)||(47970249-47970310)
chr4 (319-375)||(3176085-3176141)
chr4 (410-473)||(8422911-8422972)
chr4 (410-462)||(52735068-52735120)
chr4 (410-477)||(4071814-4071880)
chr4 (348-387)||(43824304-43824343)
chr4 (253-335)||(2996577-2996659)
chr4 (411-477)||(36734824-36734890)
chr4 (427-477)||(51555956-51556006)
chr4 (322-375)||(2841659-2841712)
chr4 (412-477)||(9680595-9680660)
chr4 (319-376)||(27123333-27123390)
chr4 (414-477)||(4191670-4191734)
chr4 (429-477)||(20907104-20907152)
chr4 (410-474)||(32724053-32724117)
chr4 (410-474)||(49219073-49219137)
chr4 (321-376)||(1137744-1137799)
chr4 (348-387)||(5131260-5131299)
chr4 (410-477)||(8130105-8130172)
chr4 (410-477)||(22684588-22684655)
chr4 (257-332)||(23819096-23819171)
chr4 (410-477)||(26883926-26883993)
chr4 (410-477)||(30024631-30024698)
chr4 (410-469)||(40865749-40865807)
chr4 (425-476)||(51044546-51044597)
chr4 (410-477)||(54325109-54325176)
chr4 (253-307)||(679750-679804)
chr4 (411-477)||(5219573-5219639)
chr4 (322-376)||(6428050-6428104)
chr4 (273-335)||(11264305-11264367)
chr4 (272-338)||(17884069-17884135)
chr4 (187-245)||(18512442-18512500)
chr4 (410-476)||(21593084-21593149)
chr4 (410-472)||(25487617-25487679)
chr4 (411-477)||(50745931-50745997)
chr4 (410-440)||(55437358-55437388)
chr4 (259-332)||(4471175-4471248)
chr4 (410-463)||(10192229-10192282)
chr4 (410-443)||(13949916-13949949)
chr4 (415-472)||(24160926-24160983)
chr4 (253-330)||(28300283-28300360)
chr4 (410-471)||(29373959-29374020)
chr4 (319-376)||(33534150-33534207)
chr4 (423-476)||(39438621-39438674)
chr4 (319-376)||(45128291-45128348)
chr4 (187-252)||(55870269-55870334)
chr4 (319-387)||(1965962-1966030)
chr4 (428-476)||(4798649-4798697)
chr4 (412-460)||(6360780-6360828)
chr4 (410-470)||(6364087-6364147)
chr4 (192-248)||(10172144-10172200)
chr4 (429-476)||(15511425-15511473)
chr4 (425-469)||(21193937-21193981)
chr4 (410-442)||(31038939-31038971)
chr4 (287-335)||(39691161-39691209)
chr4 (410-470)||(45128382-45128442)
chr4 (410-478)||(46013372-46013440)
chr4 (328-372)||(50800020-50800064)
[»] chr7 (64 HSPs)
chr7 (412-477)||(30751448-30751513)
chr7 (410-471)||(35536044-35536105)
chr7 (414-469)||(8680931-8680986)
chr7 (410-477)||(45593791-45593858)
chr7 (327-381)||(47134746-47134800)
chr7 (411-472)||(3501039-3501100)
chr7 (319-376)||(46082068-46082125)
chr7 (319-387)||(33894648-33894716)
chr7 (410-469)||(1417203-1417262)
chr7 (425-476)||(5276156-5276207)
chr7 (317-376)||(12234868-12234927)
chr7 (410-477)||(30133980-30134047)
chr7 (252-335)||(46104550-46104633)
chr7 (410-469)||(49060479-49060538)
chr7 (190-252)||(13960654-13960715)
chr7 (190-236)||(33871335-33871381)
chr7 (410-476)||(33894555-33894620)
chr7 (273-335)||(40530413-40530475)
chr7 (273-335)||(44151484-44151546)
chr7 (412-477)||(24973875-24973940)
chr7 (319-376)||(33645942-33645999)
chr7 (191-252)||(43854972-43855033)
chr7 (410-470)||(27121658-27121718)
chr7 (253-333)||(28691819-28691899)
chr7 (322-382)||(39551532-39551592)
chr7 (414-477)||(7244633-7244696)
chr7 (190-253)||(12792428-12792491)
chr7 (410-477)||(28340916-28340983)
chr7 (319-378)||(28844520-28844579)
chr7 (425-472)||(31341130-31341177)
chr7 (410-468)||(5006581-5006639)
chr7 (419-477)||(5269461-5269519)
chr7 (410-476)||(5373157-5373223)
chr7 (419-477)||(8445217-8445275)
chr7 (253-306)||(15740539-15740593)
chr7 (253-307)||(27626107-27626161)
chr7 (410-476)||(28165023-28165089)
chr7 (411-477)||(30496635-30496701)
chr7 (410-476)||(31002693-31002759)
chr7 (319-373)||(34754791-34754845)
chr7 (410-464)||(39591539-39591593)
chr7 (411-473)||(45813253-45813315)
chr7 (187-253)||(46091670-46091736)
chr7 (425-478)||(1423076-1423129)
chr7 (191-252)||(8094384-8094445)
chr7 (410-443)||(23918922-23918955)
chr7 (338-375)||(24363601-24363638)
chr7 (414-467)||(28178910-28178963)
chr7 (410-443)||(30456522-30456555)
chr7 (416-476)||(31149579-31149640)
chr7 (416-476)||(31167871-31167932)
chr7 (271-304)||(39370827-39370860)
chr7 (410-443)||(40689058-40689091)
chr7 (410-443)||(46825063-46825096)
chr7 (319-376)||(48157101-48157158)
chr7 (413-477)||(2223079-2223143)
chr7 (287-335)||(20881654-20881702)
chr7 (192-252)||(21247578-21247638)
chr7 (321-369)||(25670569-25670617)
chr7 (413-477)||(26935625-26935689)
chr7 (284-332)||(33678787-33678835)
chr7 (410-470)||(36874037-36874097)
chr7 (418-470)||(42656453-42656505)
chr7 (319-375)||(44615085-44615141)
[»] scaffold0311 (1 HSPs)
scaffold0311 (319-375)||(10598-10654)
[»] chr5 (58 HSPs)
chr5 (410-477)||(9202820-9202887)
chr5 (253-332)||(13604833-13604912)
chr5 (410-477)||(32059661-32059727)
chr5 (410-477)||(35135734-35135801)
chr5 (410-477)||(37063146-37063213)
chr5 (414-475)||(7096203-7096264)
chr5 (412-469)||(38047929-38047986)
chr5 (253-332)||(21768181-21768260)
chr5 (310-387)||(18700406-18700482)
chr5 (319-376)||(18704018-18704074)
chr5 (319-383)||(4619732-4619796)
chr5 (417-477)||(17756808-17756868)
chr5 (410-477)||(41277422-41277490)
chr5 (410-477)||(4855629-4855696)
chr5 (410-477)||(4991015-4991082)
chr5 (426-469)||(5284762-5284805)
chr5 (321-376)||(10125701-10125756)
chr5 (410-477)||(19177410-19177477)
chr5 (426-477)||(20982223-20982274)
chr5 (337-376)||(35963273-35963312)
chr5 (410-477)||(36539677-36539744)
chr5 (321-375)||(499714-499768)
chr5 (415-477)||(6738484-6738546)
chr5 (410-464)||(11615452-11615506)
chr5 (423-473)||(39128574-39128624)
chr5 (327-384)||(1899178-1899235)
chr5 (319-376)||(5951949-5952006)
chr5 (410-443)||(8158373-8158406)
chr5 (432-477)||(10391284-10391329)
chr5 (319-372)||(10907414-10907467)
chr5 (319-376)||(13604830-13604887)
chr5 (339-384)||(15074750-15074795)
chr5 (419-464)||(15985317-15985362)
chr5 (410-443)||(32969189-32969222)
chr5 (319-376)||(37526180-37526237)
chr5 (319-376)||(37611196-37611253)
chr5 (319-376)||(37690617-37690674)
chr5 (319-376)||(37787926-37787983)
chr5 (410-443)||(39750108-39750141)
chr5 (259-332)||(41957441-41957514)
chr5 (410-454)||(583845-583889)
chr5 (319-387)||(5531056-5531123)
chr5 (259-307)||(8177522-8177570)
chr5 (417-477)||(11835208-11835268)
chr5 (431-475)||(13224362-13224406)
chr5 (319-387)||(14295527-14295595)
chr5 (263-335)||(15308987-15309059)
chr5 (433-477)||(16945076-16945120)
chr5 (429-477)||(28776906-28776954)
chr5 (287-335)||(29925845-29925893)
chr5 (412-476)||(34690806-34690870)
chr5 (410-478)||(36796778-36796846)
chr5 (319-375)||(37794679-37794735)
chr5 (348-376)||(38104867-38104895)
chr5 (321-369)||(38766528-38766576)
chr5 (417-477)||(40048359-40048419)
chr5 (192-220)||(41112830-41112858)
chr5 (319-387)||(41957432-41957500)
[»] chr1 (76 HSPs)
chr1 (410-477)||(870976-871043)
chr1 (410-477)||(17420134-17420201)
chr1 (410-477)||(45107554-45107620)
chr1 (418-477)||(46499934-46499993)
chr1 (423-477)||(289171-289225)
chr1 (414-476)||(26184683-26184745)
chr1 (253-306)||(35669005-35669058)
chr1 (419-475)||(1730825-1730881)
chr1 (414-478)||(6933037-6933101)
chr1 (253-305)||(39270409-39270461)
chr1 (410-476)||(4200161-4200227)
chr1 (411-473)||(5941520-5941582)
chr1 (337-383)||(12564498-12564544)
chr1 (319-381)||(17420230-17420292)
chr1 (285-335)||(26779941-26779991)
chr1 (410-469)||(28467379-28467440)
chr1 (412-477)||(25719465-25719530)
chr1 (321-378)||(31118073-31118130)
chr1 (417-477)||(48282064-48282125)
chr1 (410-471)||(50998489-50998550)
chr1 (328-376)||(4549262-4549310)
chr1 (410-475)||(15361644-15361711)
chr1 (319-375)||(15579515-15579571)
chr1 (259-307)||(30815643-30815691)
chr1 (287-335)||(49938751-49938799)
chr1 (414-470)||(50319230-50319286)
chr1 (408-475)||(1232962-1233029)
chr1 (414-477)||(7274015-7274078)
chr1 (255-330)||(10199394-10199469)
chr1 (413-476)||(15489365-15489427)
chr1 (410-477)||(17269181-17269248)
chr1 (253-332)||(17420210-17420289)
chr1 (410-477)||(23544712-23544779)
chr1 (259-335)||(28689442-28689520)
chr1 (328-383)||(28689442-28689497)
chr1 (259-306)||(29723522-29723569)
chr1 (410-469)||(29793995-29794053)
chr1 (319-370)||(29929602-29929653)
chr1 (321-376)||(33108605-33108660)
chr1 (410-469)||(36151577-36151636)
chr1 (253-300)||(37811891-37811938)
chr1 (348-387)||(39347977-39348016)
chr1 (430-477)||(42397694-42397741)
chr1 (410-477)||(44032071-44032138)
chr1 (410-477)||(45999360-45999427)
chr1 (253-307)||(11639400-11639454)
chr1 (324-374)||(12477273-12477323)
chr1 (411-469)||(21516312-21516370)
chr1 (328-378)||(24502818-24502868)
chr1 (328-370)||(30371186-30371228)
chr1 (349-387)||(37818460-37818498)
chr1 (414-476)||(38651485-38651547)
chr1 (410-472)||(40304126-40304188)
chr1 (429-471)||(43722406-43722448)
chr1 (410-472)||(45990130-45990192)
chr1 (348-378)||(47885043-47885073)
chr1 (317-378)||(6231795-6231856)
chr1 (410-443)||(10439651-10439684)
chr1 (319-376)||(11639397-11639454)
chr1 (254-307)||(11695893-11695946)
chr1 (410-475)||(15360827-15360892)
chr1 (410-443)||(27738252-27738285)
chr1 (425-470)||(35017512-35017557)
chr1 (253-306)||(35925723-35925776)
chr1 (410-471)||(41516152-41516213)
chr1 (410-471)||(43372031-43372092)
chr1 (414-443)||(45234162-45234191)
chr1 (410-443)||(48830148-48830181)
chr1 (328-376)||(4868432-4868480)
chr1 (425-477)||(21002084-21002136)
chr1 (328-376)||(27140510-27140558)
chr1 (259-307)||(33975602-33975650)
chr1 (410-474)||(42336596-42336660)
chr1 (410-442)||(43371957-43371989)
chr1 (348-376)||(48748325-48748353)
chr1 (410-466)||(49517012-49517068)
[»] scaffold0085 (1 HSPs)
scaffold0085 (413-477)||(34072-34136)
[»] scaffold0147 (1 HSPs)
scaffold0147 (321-376)||(12687-12742)
[»] scaffold0221 (1 HSPs)
scaffold0221 (411-477)||(20226-20292)
[»] scaffold0060 (1 HSPs)
scaffold0060 (419-477)||(63366-63424)
[»] scaffold0015 (1 HSPs)
scaffold0015 (410-440)||(69015-69045)
[»] scaffold0549 (2 HSPs)
scaffold0549 (412-477)||(1798-1863)
scaffold0549 (412-477)||(3888-3953)
[»] scaffold0349 (1 HSPs)
scaffold0349 (410-443)||(18439-18472)
[»] scaffold0153 (2 HSPs)
scaffold0153 (328-376)||(6484-6532)
scaffold0153 (328-376)||(13504-13552)
[»] scaffold0089 (1 HSPs)
scaffold0089 (348-376)||(33637-33665)
[»] scaffold0050 (1 HSPs)
scaffold0050 (287-335)||(58746-58794)


Alignment Details
Target: chr6 (Bit Score: 377; Significance: 0; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 45 - 477
Target Start/End: Original strand, 3216896 - 3217329
Alignment:
Q  45 tcttctggccccactttgattgtcacagattaattcagttgactaaacaagaataatttatagaagttaaatattcttacataattnnnnnnnn-tgaag 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||    
T  3216896 tcttctggccccactttgattgtcacagattaattcagttgactaaacaagaataatttatagaagttaaatattcttacataattaaaaaaaaatgaag 3216995  T
Q  144 aaagggtgcatcaaatcaaattttaaataaaccaaaatcagttttaacttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagc 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3216996 aaagggtgcatcaaatcaaattttaaataaaccaaaatcagttttgacttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagc 3217095  T
Q  244 ttatgaaaattatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaactgatgacac 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3217096 ttatgaaaattatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaactgatgacac 3217195  T
Q  344 gtcgataagttgttttcagcttatttccataagttttccaggatgcatcatgnnnnnnnctaaaatcttatatgaaaataatttgactttattttatctt 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  3217196 gtcgataagttgttttcagcttatttccataagttttccaggatgcatcatgaaaaaaactaaaatcttatatgaaaataatttgactttattttatctt 3217295  T
Q  444 ctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||||||||||||||||||||    
T  3217296 ctcttacaaaaatagcttatacataagcacttat 3217329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 33498708 - 33498640
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    ||||||||||||||||| |||||| ||| ||| ||| ||||||||||||||||||||||||| ||||||    
T  33498708 agcttatgaaaacaacttatgacatgtctataggttattttcagcttatttccataagtttttcaggat 33498640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 27894122 - 27894053
Alignment:
Q  263 agcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||| |||| || ||| ||||||||||||    
T  27894122 agcttatgatatgtccataaactgttttcagcttattttcataagcttttcaagatatcttatgaaaaca 27894053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 34939602 - 34939546
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||||||| |||||||| ||||||||||  |||||||||||||||||||||||||||    
T  34939602 agcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataa 34939546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 410 - 472
Target Start/End: Original strand, 29274301 - 29274363
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagca 472  Q
    |||||||||||| ||||||||||||||||||||| |  || | ||||||||||||||||||||    
T  29274301 cttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 6647463 - 6647394
Alignment:
Q  263 agcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||| ||| |||| ||||| |||||||||||||||||||||||| | | ||| ||||||||||||||||    
T  6647463 agcttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaaca 6647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 474
Target Start/End: Original strand, 10452432 - 10452496
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcact 474  Q
    |||||||||||||| ||||| |||||||||| || | ||| | ||||||||||||||||||||||    
T  10452432 cttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcact 10452496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 371
Target Start/End: Original strand, 20377901 - 20377953
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttcc 371  Q
    ||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||    
T  20377901 agcttatgaaaacaacttatgacatgtctataagttgttttcggcttatttcc 20377953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 2027479 - 2027530
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagctta 462  Q
    ||||||||||||| ||||||||||||||||||| | ||| ||||||||||||    
T  2027479 ttatatgaaaatagtttgactttattttatcttttgttataaaaatagctta 2027530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 476
Target Start/End: Complemental strand, 2514685 - 2514634
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||||||||||||||| | ||| | ||||||||||||||||||||||||    
T  2514685 tttgactttattttatcttttattatagaaatagcttatacataagcactta 2514634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 7714023 - 7713956
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||||||||||||||||||| | |||  ||| ||| |||||||||||| |||||    
T  7714023 cttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttat 7713956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 9027575 - 9027508
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||| |||| | ||||||||||||||||||||| ||  | |||||||||||| ||||||||||||    
T  9027575 cttatattaaaacagtttgactttattttatcttctattgtagaaatagcttatagataagcacttat 9027508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 22742364 - 22742297
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||||||||||||||||| | | ||| | |||||||||||| ||||| ||||||    
T  22742364 cttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaacttat 22742297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 445
Target Start/End: Original strand, 27693511 - 27693546
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttct 445  Q
    ||||||||||||||||||||||||||||||||||||    
T  27693511 cttatatgaaaataatttgactttattttatcttct 27693546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 32386635 - 32386702
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| |||||||| |||||||||||| |||||   ||||||  |||||||||||||||||    
T  32386635 cttatatgaaaacaatttgaccttattttatcttttcttagtgaaatagtctatacataagcacttat 32386702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 475
Target Start/End: Original strand, 2034506 - 2034575
Alignment:
Q  405 aaaatcttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||| ||||||||||| || ||||||||||||||||||| | ||  ||||| |||||||||||||||||||    
T  2034506 aaaagcttatatgaaagtagtttgactttattttatctt-tgttgtaaaaacagcttatacataagcactt 2034575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 464
Target Start/End: Original strand, 11363440 - 11363494
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttata 464  Q
    |||| ||||||||||||| ||||||||||||||| ||||  ||||||||||||||    
T  11363440 cttacatgaaaataatttaactttattttatcttttcttttaaaaatagcttata 11363494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 2460132 - 2460189
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| |||||||| |||||| |||  ||||||||||||| ||||||||||||||    
T  2460132 agcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataag 2460189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 7931707 - 7931764
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||||||||||||||| |||||| ||   ||||||||||||||||||||||| ||||    
T  7931707 agcttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttccgtaag 7931764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 9027667 - 9027610
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| ||| |||| |||||| ||| |||||||||||||||||||||| ||||||    
T  9027667 agcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataag 9027610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 27595639 - 27595672
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    ||||||||||||||||||||||||||||||||||    
T  27595639 cttatatgaaaataatttgactttattttatctt 27595672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 30863335 - 30863278
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||||||||||||||| |||||| ||  ||||||||||||||||||| ||| |||||    
T  30863335 agcttatgaaaacaacttatgacatgtacataagttgttttcagcttacttctataag 30863278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 31624176 - 31624123
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataa 306  Q
    ||||||||||||||| ||| |||| |||||  ||||||||||||||||||||||    
T  31624176 ttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataa 31624123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 7785734 - 7785782
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||| || |||||| ||| |||||||||||||||||||||||||||||    
T  7785734 aaacagcttatgacatgtctataagttgttttcagcttatttccataag 7785782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 32171364 - 32171432
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||||||||||| || |||||| ||| | ||| | ||||||||||||||||||||| | ||||||||    
T  32171364 agcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagctatccaggat 32171432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 1669779 - 1669830
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttc 370  Q
    ||||||||||||||||| |||||| ||| ||||| ||||||||||| |||||    
T  1669779 agcttatgaaaacaacttatgacatgtctataagctgttttcagctcatttc 1669830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 4006712 - 4006645
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||| |||| ||||||||||||||||||| | | ||| | ||||| ||||| |||||||||||||    
T  4006712 cttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Original strand, 10749300 - 10749358
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||||||||||||||| ||||||||||||||| | ||| | ||||| |||||||||||    
T  10749300 cttatatgaaaataatttaactttattttatcttttattatagaaata-cttatacataa 10749358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 20671937 - 20672004
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||| ||||| ||||||||||||||||||||| |  |  | ||||||||||||||||| |||||||    
T  20671937 cttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcacttat 20672004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 27889833 - 27889872
Alignment:
Q  268 ttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  27889833 ttgatatgtccataaactgttttcaacatattttcataag 27889872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 376
Target Start/End: Original strand, 27909637 - 27909676
Alignment:
Q  337 atgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  27909637 atgacatgtccataagttgttttcagcttatttccataag 27909676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 477
Target Start/End: Complemental strand, 29269886 - 29269827
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||| ||||||||||||||||||||||| ||| | |||||| ||||||| ||||| ||||    
T  29269886 aaaacaatttgactttattttatcttctgttatagaaatagtttatacacaagcatttat 29269827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 32386171 - 32386238
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||| |||| | ||| ||||||||||||||| ||| |   |||||||||||||||||||||||||    
T  32386171 cttatataaaaacagttttactttattttatcttttctaagtgaaatagcttatacataagcacttat 32386238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 374
Target Start/End: Original strand, 32577967 - 32578022
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccata 374  Q
    ||||||||||||||||| |||||| |||  | || |||||||||||||||||||||    
T  32577967 agcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccata 32578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 281841 - 281883
Alignment:
Q  331 caactgatgacacgtcgataagttgttttcagcttatttccat 373  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||    
T  281841 caacttatgacatgtctataagttgttttcagcttatttccat 281883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 1575837 - 1575783
Alignment:
Q  253 ttatgaaaacagcttttgat-atgtccataaaatgttttcaacttattttcataa 306  Q
    ||||||||||||||| |||  ||||||||||  ||||||||||||||||||||||    
T  1575837 ttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttcataa 1575783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 2023402 - 2023452
Alignment:
Q  285 tgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||||||||||||||| |||  || |||||| ||||||||||||    
T  2023402 tgttttcaacttattttcataagctttaaaaaatagctaatgaaaacaact 2023452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 440
Target Start/End: Original strand, 2732311 - 2732341
Alignment:
Q  410 cttatatgaaaataatttgactttattttat 440  Q
    |||||||||||||||||||||||||||||||    
T  2732311 cttatatgaaaataatttgactttattttat 2732341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 4248943 - 4248889
Alignment:
Q  423 aatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||||||| | |||   |||||||||||| ||||||||||||    
T  4248943 aatttgactttattttatcttttgttattgaaatagcttatatataagcacttat 4248889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 24836272 - 24836330
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    ||||| ||||| ||||||||||||||||||||| | ||| | ||||| |||||||||||    
T  24836272 ttatacgaaaacaatttgactttattttatcttttgttatagaaataacttatacataa 24836330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 469
Target Start/End: Complemental strand, 27894044 - 27893986
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||| |||| |||||||||||||||||| |||| ||  | |||||||||||||||||    
T  27894044 ttatattaaaacaatttgactttattttatattctgttgtagaaatagcttatacataa 27893986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 32386085 - 32386155
Alignment:
Q  317 atagcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||||||| ||||| || |  ||| ||| ||||||||||||||||||| || |||||| ||||||||||    
T  32386085 atagcttatggaaacagcttacaacatgtccataagttgttttcagcttactttcataagctttccaggat 32386155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 427 - 477
Target Start/End: Complemental strand, 33259797 - 33259747
Alignment:
Q  427 tgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||| | |||||||| | ||| |||||||||||||||||||||||||||    
T  33259797 tgacttcaatttatcttttgttataaaaatagcttatacataagcacttat 33259747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 433 - 475
Target Start/End: Complemental strand, 33416360 - 33416318
Alignment:
Q  433 tattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    ||||||||||| | ||| |||||||||||||||||||||||||    
T  33416360 tattttatcttttgttataaaaatagcttatacataagcactt 33416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Original strand, 2027891 - 2027936
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    ||||||||||||||||||| |  |||||||||||||||||| ||||    
T  2027891 tttgactttattttatcttttaatacaaaaatagcttatacgtaag 2027936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 387
Target Start/End: Original strand, 7945868 - 7945933
Alignment:
Q  322 ttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||||||||||| ||| || ||  || ||||||||| |||||||||||||||| | ||||||||    
T  7945868 ttatgaaaacaacttatggcatgtttattagttgttttaagcttatttccataagctctccaggat 7945933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Original strand, 11340699 - 11340764
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||| || ||||||||||||||| | ||| | || || |||||| ||||||||||||    
T  11340699 tatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttat 11340764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 21959726 - 21959661
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||| ||| || |||||||||||||||||| | |||   ||||||||||||| |||||||||    
T  21959726 cttatatgcaaacaaattgactttattttatcttttgttatggaaatagcttatacttaagcactt 21959661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 27713505 - 27713472
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||| |||||||||||||||||||||    
T  27713505 cttatatgaaaagaatttgactttattttatctt 27713472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 29940794 - 29940729
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||| ||||||| || |||||||||||||||||| | ||| | ||| ||||||||| |||||||||    
T  29940794 cttaaatgaaaacaaattgactttattttatcttttgttatagaaaaagcttatacttaagcactt 29940729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 33832256 - 33832309
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccata 374  Q
    ||||||||||||||| |||||| ||  |||||||||||| ||||||||| ||||    
T  33832256 cttatgaaaacaacttatgacatgtttataagttgtttttagcttattttcata 33832309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 478
Target Start/End: Complemental strand, 34862965 - 34862924
Alignment:
Q  437 ttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    ||||||| ||| | ||||||||||||||||||||||||||||    
T  34862965 ttatcttttctcataaaaatagcttatacataagcacttatt 34862924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 733158 - 733226
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||| ||| ||| |||| |||||| ||| | |||||||||||||| |||||| |||||||||| |||||    
T  733158 agctgatggaaataacttatgacatgtccacaagttgttttcagcatatttctataagttttctaggat 733226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 462
Target Start/End: Complemental strand, 1402994 - 1402942
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagctta 462  Q
    |||||||||||||| ||| ||||||||||||||| | ||| | ||||||||||    
T  1402994 cttatatgaaaatagtttaactttattttatcttttgttatagaaatagctta 1402942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 476
Target Start/End: Complemental strand, 1497976 - 1497912
Alignment:
Q  413 atatgaaaataatttgactttattttatcttctc-ttacaaaaatagcttatacataagcactta 476  Q
    ||||||||| | ||||||||||||||| ||| |  ||| |||||||||||| |||||||||||||    
T  1497976 atatgaaaacagtttgactttattttaccttttggttaaaaaaatagcttaaacataagcactta 1497912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 3155253 - 3155209
Alignment:
Q  330 acaactgatgacacgtcgataagttgttttcagcttatttccata 374  Q
    |||||| |||||| ||| ||||| |||||||||||||||||||||    
T  3155253 acaacttatgacatgtctataagctgttttcagcttatttccata 3155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Complemental strand, 6537007 - 6536979
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  6537007 ataagttgttttcagcttatttccataag 6536979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 9667975 - 9668023
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| |||||| ||| ||||| |||||||| ||||||||||||||    
T  9667975 aaacaacttatgacatgtccataagctgttttcaacttatttccataag 9668023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 9763612 - 9763564
Alignment:
Q  287 ttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||| ||||||||| | |  ||||||||||||||||||||||    
T  9763612 ttttcaacttaatttcataagttctacaatatagcttatgaaaacaact 9763564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 10016761 - 10016701
Alignment:
Q  192 ttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaa 252  Q
    ||||||||||||||||||  ||||||||| ||| || ||||||| | |||||| |||||||    
T  10016761 ttatttgagcttatctacaggcataaacacttgtgagactatttcagagagctaatgaaaa 10016701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Original strand, 20512654 - 20512682
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  20512654 ataagttgttttcagcttatttccataag 20512682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 469
Target Start/End: Original strand, 22691592 - 22691649
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||||||||| ||||||| ||||| ||||||  | |||||||||||||||| ||||||    
T  22691592 cttatatgaaaacaatttgaatttatgttatct--tgttacaaaaatagcttacacataa 22691649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 24476600 - 24476540
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    |||||||||||||||||| |||  |||||||||| |  || | ||||||||||||||||||    
T  24476600 cttatatgaaaataatttaactacattttatcttttgctatagaaatagcttatacataag 24476540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 25100095 - 25100047
Alignment:
Q  287 ttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||||||  ||||| | ||||| |||||||||||||||||||    
T  25100095 ttttcaacttatttctataagctctttaagatagcttatgaaaacaact 25100047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 442
Target Start/End: Original strand, 27615345 - 27615377
Alignment:
Q  410 cttatatgaaaataatttgactttattttatct 442  Q
    |||||||||||| ||||||||||||||||||||    
T  27615345 cttatatgaaaagaatttgactttattttatct 27615377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 31583745 - 31583685
Alignment:
Q  273 atgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaa 333  Q
    ||||||||||  |||||||||||||||| |||||| ||||    |||||||||||||||||    
T  31583745 atgtccataagttgttttcaacttatttccataagcttttcgggatagcttatgaaaacaa 31583685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 32975961 - 32975909
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||| || | ||||| ||||| ||||||||||| |||||||    
T  32975961 tttgactttattttatattttgttacagaaataacttatacataaacacttat 32975909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 34939833 - 34939777
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||||| | ||||| || |||||| ||| |||| |||||||||||||||||||||||    
T  34939833 agcttacggaaacagcttatgacatgtccataaattgttttcagcttatttccataa 34939777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 25609794 - 25609727
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||| |||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  25609794 cttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcacttat 25609727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 411 - 475
Target Start/End: Original strand, 3423841 - 3423905
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||| |||||    
T  3423841 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 3423905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 16947040 - 16946980
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    ||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  16947040 cttatgtgaaaataatttgactttatttaatcttttcttacacaaatagcttatacataag 16946980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 17017705 - 17017645
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    ||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  17017705 cttatgtgaaaataatttgactttatttaatcttttcttacacaaatagcttatacataag 17017645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 254 - 383
Target Start/End: Complemental strand, 40279493 - 40279362
Alignment:
Q  254 tatgaaaacagcttttgatat-gtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaactgatgaca-cgtcgataa 351  Q
    |||||||||| ||||| | || ||||||||| ||||||||||||||||||||||| | |  |||||||||||||||||||||| ||| ||  ||  ||||    
T  40279493 tatgaaaacaacttttaacattgtccataaactgttttcaacttattttcataagttctccaatatagcttatgaaaacaacttatggcattgttcataa 40279394  T
Q  352 gttgttttcagcttatttccataagttttcca 383  Q
      ||||||||||| |||| |||||||| ||||    
T  40279393 actgttttcagctaattttcataagttctcca 40279362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 9478297 - 9478230
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||| ||||| |||||||||||| || ||| | ||||||||||||||||| |||||||    
T  9478297 cttatatgaaaatattttgagtttattttatctactgttatagaaatagcttatacataaacacttat 9478230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 17952773 - 17952840
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||| ||||||||||||||||||| | ||| | |||||||||||| |||||| |||||    
T  17952773 cttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttat 17952840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 410 - 476
Target Start/End: Original strand, 18962110 - 18962176
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||| | ||| ||||||||||||||| | ||| |||||||||| |||||||||||||||    
T  18962110 cttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcactta 18962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 387
Target Start/End: Complemental strand, 41817254 - 41817189
Alignment:
Q  322 ttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    ||||||||||| || |||||| || ||||| |||||||||||||||||||||||| | ||||||||    
T  41817254 ttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagctctccaggat 41817189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 43065431 - 43065488
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||||||||||||||| |||||| ||| |||| |||||||||||||||||| |||||    
T  43065431 agcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataag 43065488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 10285950 - 10285890
Alignment:
Q  318 tagcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagtt 378  Q
    ||||||||||||| |||| |||||| ||| ||||| |||||||| ||||||||||||||||    
T  10285950 tagcttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataagtt 10285890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 36852448 - 36852396
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||||||||  || | |||||||||||||||||||||||||    
T  36852448 tttgactttattttatcttctaatagagaaatagcttatacataagcacttat 36852396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 377
Target Start/End: Original strand, 44606093 - 44606149
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagt 377  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||| |||| |||||||    
T  44606093 cttatgaaaacaacttatgacatgtccataagttgttttcagctgattttcataagt 44606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 477
Target Start/End: Complemental strand, 4026807 - 4026748
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||| ||||||||||||||| |  || |||||||||||||| ||||||||||||    
T  4026807 aaaataatttaactttattttatcttttgctataaaaatagcttatagataagcacttat 4026748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 28902075 - 28902008
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | ||| | ||||||||| ||| | ||| |||||||||||||||||||||||||||    
T  28902075 cttatatgaaaacagtttaattttattttaacttatgttataaaaatagcttatacataagcacttat 28902008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 28933822 - 28933755
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||| ||||||||||||||| || |||||||||| | ||| | ||||||||||||||| |||||||||    
T  28933822 cttaaatgaaaataatttgatttgattttatcttttgttatataaatagcttatacatgagcacttat 28933755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 37053592 - 37053525
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | |||||||||||||||| |||| ||| | ||||||  |||||||||||||||||    
T  37053592 cttatatgaaaacagtttgactttattttattttctgttatagaaatagtctatacataagcacttat 37053525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 680590 - 680512
Alignment:
Q  252 attatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaa 330  Q
    |||||||||||||||| ||| ||||  ||||| |||||||| |||||||||| ||| | || || ||||||||||||||    
T  680590 attatgaaaacagcttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaa 680512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 477
Target Start/End: Complemental strand, 3102690 - 3102624
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||| |||||| |||||||||||||||| || |  || |||||||||||||||||||||| ||||    
T  3102690 ttatataaaaatagtttgactttattttatattttgctataaaaatagcttatacataagcagttat 3102624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 476
Target Start/End: Original strand, 5045245 - 5045295
Alignment:
Q  426 ttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||||||||| | ||| ||||||||||||||||||| ||||||    
T  5045245 ttgactttattttatcttttgttataaaaatagcttatacataaacactta 5045295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 476
Target Start/End: Complemental strand, 7283012 - 7282950
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||| | |||||||| ||||| |||| ||||| ||||||||||||||||||| ||||||    
T  7283012 tatgaaaacagtttgacttcattttttcttttcttataaaaatagcttatacataaacactta 7282950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 9595344 - 9595267
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaa 330  Q
    ||||||||||| ||| ||| |||||||| || | |||||| ||||||||||||||  |||||| |||| |||||||||    
T  9595344 ttatgaaaacatcttatgacatgtccatgaactattttcagcttattttcataagcattttaagatagtttatgaaaa 9595267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 467
Target Start/End: Original strand, 23143050 - 23143107
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacat 467  Q
    |||||| ||||| ||||||| || |||||||||| | |||||||||||||||||||||    
T  23143050 cttataagaaaacaatttgatttgattttatcttttgttacaaaaatagcttatacat 23143107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 467
Target Start/End: Original strand, 23554840 - 23554897
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacat 467  Q
    |||||| ||||| ||||||| || |||||||||| | |||||||||||||||||||||    
T  23554840 cttataagaaaacaatttgatttgattttatcttttgttacaaaaatagcttatacat 23554897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 477
Target Start/End: Complemental strand, 31461426 - 31461369
Alignment:
Q  420 aataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||||||||||| | ||| | |||||||||||| |||| |||||||    
T  31461426 aataatttgactttattttatcttttgttatagaaatagcttatatataaccacttat 31461369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 35378997 - 35379054
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||||||| ||||||||  ||  |||||||||||||||||||||| ||||||    
T  35378997 agcttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataag 35379054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 380
Target Start/End: Original strand, 43456688 - 43456749
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagtttt 380  Q
    ||||| ||||||||||| |||||| ||| ||||  ||||||||||||||||||||| |||||    
T  43456688 agcttgtgaaaacaactcatgacatgtccataaactgttttcagcttatttccatatgtttt 43456749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 9556328 - 9556260
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    ||||||||||||||||| |||||| ||| |||||| | ||||| ||||||| |||||| |||| |||||    
T  9556328 agcttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggat 9556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 478
Target Start/End: Complemental strand, 10143170 - 10143102
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    ||||||| |||| | |||||||| |||||||||| | ||| | ||||| ||||||||||||||||||||    
T  10143170 cttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcacttatt 10143102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 44606094 - 44606174
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaa 333  Q
    ||||||||||| ||| ||| ||||||||||  |||||||| || |||||||||||  |||||  ||| |||||||||||||    
T  44606094 ttatgaaaacaacttatgacatgtccataagttgttttcagctgattttcataagtgttttagaataacttatgaaaacaa 44606174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 3100077 - 3100132
Alignment:
Q  423 aatttgactttattttatcttctcttacaaaaatagcttatacat-aagcacttat 477  Q
    ||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||    
T  3100077 aatttgaatttattttatcttctgatataaaaatagcttatacataaagcacttat 3100132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 3673805 - 3673738
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||| |||||||||||| || | ||| | ||||| || ||||||||||||||||    
T  3673805 cttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttat 3673738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 8017520 - 8017441
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||||||||||||| |||||||| |||||  |||||||  | |||||||||||| | |  || ||||||||||||||||    
T  8017520 ttatgaaaacagcttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaaca 8017441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 9556325 - 9556246
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||||||||| ||  ||| ||||||||||   | |||||||||||||||||||| ||| ||  ||||||||||||||||    
T  9556325 ttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggatagcttatgaaaaca 9556246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 477
Target Start/End: Original strand, 11344360 - 11344423
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||| ||||||||||| ||||||||| | ||| | ||||| ||||| |||||||||||||    
T  11344360 tatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcacttat 11344423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 335
Target Start/End: Complemental strand, 32634386 - 32634339
Alignment:
Q  288 tttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||| |||||||||||||| ||| | |||||||||||||||||||||    
T  32634386 tttcagcttattttcataagctttctgatatagcttatgaaaacaact 32634339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 35459908 - 35459841
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||| ||||| ||||||||||||||||||||| |  || | |||||||||||||| || |||||||    
T  35459908 cttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttat 35459841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Original strand, 40837502 - 40837557
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacat 467  Q
    |||||||||| |||||||||||| |||||||| | ||| | |||||||||||||||    
T  40837502 tatatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 441
Target Start/End: Complemental strand, 43173220 - 43173189
Alignment:
Q  410 cttatatgaaaataatttgactttattttatc 441  Q
    ||||||||||||||||||||||||||||||||    
T  43173220 cttatatgaaaataatttgactttattttatc 43173189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 477
Target Start/End: Original strand, 44606164 - 44606227
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||| |||| | |||||||||||||| | |||  |||||||||||||||||| |||||||    
T  44606164 tatgaaaacaattggtctttattttatcttttgttatgaaaatagcttatacataaacacttat 44606227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 375
Target Start/End: Complemental strand, 787419 - 787365
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||||||||||| || |||||| ||| ||||| |||||||||||||| |||||||    
T  787419 cttatgaaaacagcttatgacatgtccataagctgttttcagcttatctccataa 787365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 1494430 - 1494480
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttca 303  Q
    ||||||||||||||| ||| ||||||||||| |||||| | ||||||||||    
T  1494430 ttatgaaaacagcttatgacatgtccataaactgtttttagcttattttca 1494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 2416311 - 2416245
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||| |||| ||||| |||| |||||||||| |  |||| ||||| ||||||||||||||||||    
T  2416311 cttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataagcactta 2416245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 477
Target Start/End: Original strand, 28039405 - 28039471
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||| |||| |||||||||||||||| | | || |||||||||||| |||| || |||||    
T  28039405 ttatatgaaaacaattggactttattttatcttgtgtaaccaaaatagcttattcatatgcgcttat 28039471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 29729926 - 29729856
Alignment:
Q  407 aatcttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||| |||||| | ||| |||||| |||||||| | ||| ||||||||| ||||| |||||||||||    
T  29729926 aatcttatgtgaaaacagtttcactttaatttatcttttgttataaaaatagcatatacgtaagcacttat 29729856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 369
Target Start/End: Original strand, 30538154 - 30538204
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttattt 369  Q
    |||||||  |||||||| |||||| ||| ||||||||||||||||||||||    
T  30538154 agcttatagaaacaacttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 472
Target Start/End: Original strand, 32098384 - 32098442
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagca 472  Q
    |||||||| | ||||||||||||||||||| | ||| | |||||||||||| |||||||    
T  32098384 tatgaaaacactttgactttattttatcttttgttatagaaatagcttatatataagca 32098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 39622091 - 39622029
Alignment:
Q  190 acttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaa 252  Q
    |||||||||| |||||||||||| |||| || |||||| ||| ||||| ||| ||||||||||    
T  39622091 acttatttgaacttatctacttgtataagcacttgcgacactgtttgagagaacttatgaaaa 39622029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 383
Target Start/End: Complemental strand, 40279398 - 40279292
Alignment:
Q  278 cataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaactgatgaca-cgtcgataagttgttttcagcttatttccataag 376  Q
    |||||| |||||||| || ||||||||||| | |  |||||||||||||||||||||| ||| ||  ||  ||||  ||||||||||| |||| ||||||    
T  40279398 cataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataag 40279299  T
Q  377 ttttcca 383  Q
    || ||||    
T  40279298 ttctcca 40279292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 41809226 - 41809288
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttc 381  Q
    ||||| || |||||||| |||||| ||  |||||||||||| |||||||||||||||| ||||    
T  41809226 agcttgtggaaacaacttatgacatgttcataagttgtttttagcttatttccataagctttc 41809288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 467
Target Start/End: Complemental strand, 3458655 - 3458598
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacat 467  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||| |||| ||||    
T  3458655 cttatatgaaaaaagtttgactttattttatcttttgttataaaaataacttagacat 3458598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 11513896 - 11513863
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||| |||||||||||||||||||||    
T  11513896 cttatatgaaaacaatttgactttattttatctt 11513863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 28039316 - 28039377
Alignment:
Q  322 ttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttcca 383  Q
    |||||||||||| | |||||  ||  ||||| |||||||||||||||||||||| |||||||    
T  28039316 ttatgaaaacaagttatgacttgttcataagctgttttcagcttatttccataacttttcca 28039377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 31740031 - 31740064
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||||| |||||||||||||||||||    
T  31740031 cttatatgaaaatagtttgactttattttatctt 31740064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 33192191 - 33192126
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||||||| | ||||||||||||||||||| | ||| | |||||| || || ||||||||||    
T  33192191 cttatatgaaaacagtttgactttattttatcttatgttatagaaatagtttttatataagcactt 33192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Original strand, 34054975 - 34055040
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||| ||| | |||| |||||||||||||| | ||| | ||||||| |||||||||||||||||    
T  34054975 tatatgtaaacagtttgcctttattttatcttttgttatagaaatagcctatacataagcacttat 34055040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 34339904 - 34339871
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||| |||||||||||||||||||||||||||    
T  34339904 cttatacgaaaataatttgactttattttatctt 34339871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 34652017 - 34652074
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||  |||||||| |||||| ||| ||||| |||||||| ||||||||||||||    
T  34652017 agcttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataag 34652074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 40279328 - 40279271
Alignment:
Q  278 cataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    |||||| |||||||| || ||||||||||| | |  ||||||||||||||||||||||    
T  40279328 cataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaact 40279271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 476
Target Start/End: Original strand, 41039739 - 41039784
Alignment:
Q  431 tttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||||||||| | | ||| ||||||||||||||||||||||||    
T  41039739 tttattttatcttttgtcacagaaatagcttatacataagcactta 41039784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 477
Target Start/End: Complemental strand, 44443300 - 44443251
Alignment:
Q  428 gactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||| ||||||||||| | | | |||||||||||||||||||||||||||    
T  44443300 gactatattttatcttttgtaataaaaatagcttatacataagcacttat 44443251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 1939323 - 1939395
Alignment:
Q  260 aacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    |||| ||| ||| ||||||||||  |||||||||||||||| |||||| | |  | |||||||||||||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaaca 1939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 472
Target Start/End: Complemental strand, 5133772 - 5133708
Alignment:
Q  408 atcttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagca 472  Q
    ||||||||| |||| | |||  |||||||||||||| | ||| | ||||||||||||||||||||    
T  5133772 atcttatataaaaacagtttatctttattttatcttttgttatagaaatagcttatacataagca 5133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 477
Target Start/End: Complemental strand, 7825243 - 7825183
Alignment:
Q  417 gaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||| ||||| |||||| |||||||| | ||| |||||||||||||||| || |||||||    
T  7825243 gaaaaaaatttaactttactttatcttttgttataaaaatagcttatacagaaacacttat 7825183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 10646362 - 10646394
Alignment:
Q  411 ttatatgaaaataatttgactttattttatctt 443  Q
    ||||| |||||||||||||||||||||||||||    
T  10646362 ttataggaaaataatttgactttattttatctt 10646394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 19977946 - 19977898
Alignment:
Q  423 aatttgactttattttatcttctcttacaaaaatagcttatacataagc 471  Q
    ||||||||||| ||||||||| ||||| |  ||||||||||||||||||    
T  19977946 aatttgactttgttttatcttttcttatagcaatagcttatacataagc 19977898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 28677739 - 28677791
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||||| |   | |||||||||||||||| ||||||||||    
T  28677739 tttgactttattttatcttttacaataaaaatagcttatacacaagcacttat 28677791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 29316764 - 29316820
Alignment:
Q  327 aaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttcca 383  Q
    |||||| || |||||| ||  ||||||| ||||||||||||||||||||||| ||||    
T  29316764 aaaacagcttatgacatgttcataagttcttttcagcttatttccataagttctcca 29316820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 33256826 - 33256774
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcata 305  Q
    ||||||||||||||| ||| |||| |||||| |||| ||| ||||||||||||    
T  33256826 ttatgaaaacagcttatgacatgttcataaactgttctcagcttattttcata 33256774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 37034038 - 37033982
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    |||||||||  ||||||||||||||||||| | ||| | |||||| |||||||||||    
T  37034038 tatgaaaatcgtttgactttattttatctttttttatagaaatagtttatacataag 37033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 478
Target Start/End: Original strand, 38259735 - 38259803
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    ||||| |||||| ||||||| || |||||||| | |  ||||||||||| |||||||||||||| ||||    
T  38259735 cttatttgaaaacaatttgatttaattttatcatttactacaaaaatagtttatacataagcacctatt 38259803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 39983340 - 39983281
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    ||||||||||||| |||| | ||||||||| ||| | |||||||||||||||||| |||||    
T  39983340 cttatatgaaaattattttattttattttacctt-tgttacaaaaatagcttatatataag 39983281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 43808574 - 43808507
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctctta-caaaaatagcttatacataagcacttat 477  Q
    |||||||||||||| ||| |||||||||||| || | |||  ||||||||||||||||||| |||||||    
T  43808574 cttatatgaaaatagtttaactttattttatgtt-tgttataaaaaatagcttatacataaacacttat 43808507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 43985021 - 43985069
Alignment:
Q  287 ttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    |||||| |||||||||||||| | || || |||||||||||||||||||    
T  43985021 ttttcagcttattttcataagctcttcaagatagcttatgaaaacaact 43985069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 411 - 476
Target Start/End: Complemental strand, 27573 - 27508
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||    
T  27573 ttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcactta 27508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 21350 - 21410
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    |||||| ||||| ||||| ||||||||||||||| || || ||||||||||||||||||||    
T  21350 cttatacgaaaacaatttaactttattttatcttttcctataaaaatagcttatacataag 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 58935 - 58875
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    |||||| ||||| ||||| ||||||||||| ||| || || |||||||||||| |||||||    
T  58935 cttatacgaaaacaatttaactttattttaacttttcctataaaaatagcttacacataag 58875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 1395669 - 1395604
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||||||||||||||||||||||||||||| | ||| | |||||||||||||||| ||||||    
T  1395669 cttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcactt 1395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 414 - 477
Target Start/End: Original strand, 16790432 - 16790495
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||| ||||||||||||  | ||| |||||||||||||||||||||||||||    
T  16790432 tatgaaaataatttgattttattttatctgttgttataaaaatagcttatacataagcacttat 16790495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 33307652 - 33307719
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||||||||||||||| || || | ||||  |||||||||||||||||||||||||    
T  33307652 cttatatgaaaataatttgactttatttcatattttgttactgaaatagcttatacataagcacttat 33307719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 414 - 476
Target Start/End: Complemental strand, 3758042 - 3757980
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||| | |||||||||||||||| || | ||||||||||||||||||||||||||||||    
T  3758042 tatgaaaagagtttgactttattttatattttgttacaaaaatagcttatacataagcactta 3757980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 37273223 - 37273159
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttcca 383  Q
    |||||||| |||||||| |||||| ||| |||||||||||||| |||||||||||||||| ||||    
T  37273223 agcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctcca 37273159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 24624296 - 24624217
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||||||||||||| ||| ||||||||||| |||||||| ||||||  |||||||||| ||  ||||| ||||||||||    
T  24624296 ttatgaaaacagcttatgacatgtccataaactgttttcagcttattaacataagatttctaggatagcctatgaaaaca 24624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 39602194 - 39602273
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||||| ||||||| ||| |||| |||||| ||||||||||||||||||||||| | |  || ||||||||||||||||    
T  39602194 ttatgaagacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaaca 39602273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 477
Target Start/End: Original strand, 44374720 - 44374783
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||| ||||||||||||||||||||| | ||| | | |||||||||||||||||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttat 44374783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 411 - 476
Target Start/End: Original strand, 20192679 - 20192744
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||   ||||||||||||||||||| | ||| | ||||||||||||||||||||||||    
T  20192679 ttatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 48048963 - 48049019
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    ||||||||||| ||||| |||||| ||| ||||| ||||||||||||||||||||||    
T  48048963 agcttatgaaaccaactcatgacatgtccataagctgttttcagcttatttccataa 48049019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 477
Target Start/End: Original strand, 49772747 - 49772807
Alignment:
Q  417 gaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||| |||| ||||||||||||| || | ||||||||||||||||||||||| |||||||    
T  49772747 gaaaacaattagactttattttattttttattacaaaaatagcttatacataaacacttat 49772807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 27792870 - 27792803
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||| |||||| |||||||||||| | ||    |||||||||||||||||||||||||    
T  27792870 cttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttat 27792803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 387
Target Start/End: Complemental strand, 43875545 - 43875486
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||||| |||| ||||| ||||||||||||| | ||||||||||||||| ||||||||    
T  43875545 aaacaacttatgatacgtccataagttgttttctgattatttccataagttctccaggat 43875486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 5391965 - 5391911
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    ||||||||||||||| ||| |||| |||||  |||||||||||||||||||||||    
T  5391965 ttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataag 5391911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 36887578 - 36887508
Alignment:
Q  265 cttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||| |||| ||||| ||||||||| |||||||||||||| | || || || ||||||||||||||||    
T  36887578 cttttgacatgttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaacaact 36887508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 43115142 - 43115088
Alignment:
Q  322 ttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||| |||||||| |||||| ||| |||| ||||||||||||||||||||||||    
T  43115142 ttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataag 43115088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 475
Target Start/End: Original strand, 23530265 - 23530322
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||||||||||||||||||||| | ||| |||| |||||| ||| |||||||||    
T  23530265 aaaataatttgactttattttatcttttgttagaaaactagcttctacgtaagcactt 23530322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 478
Target Start/End: Complemental strand, 36101551 - 36101498
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    ||||||||||||||||||| | ||||| ||||||||||| ||||| ||||||||    
T  36101551 tttgactttattttatcttatattacagaaatagcttattcataaccacttatt 36101498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 478
Target Start/End: Complemental strand, 36139861 - 36139808
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    ||||||||||||||||||| | ||||| ||||||||||| ||||| ||||||||    
T  36139861 tttgactttattttatcttatattacagaaatagcttattcataaccacttatt 36139808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 36200176 - 36200131
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccat 373  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttatttccat 36200131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 463
Target Start/End: Original strand, 37689456 - 37689509
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttat 463  Q
    |||||||||||||||||| |||||| |||||||| | ||| |||||||||||||    
T  37689456 cttatatgaaaataatttaactttactttatcttttgttataaaaatagcttat 37689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 427 - 476
Target Start/End: Complemental strand, 42039140 - 42039091
Alignment:
Q  427 tgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||||| || | ||||| ||||||||||||||||||||||||    
T  42039140 tgactttattttattttttgttacagaaatagcttatacataagcactta 42039091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 475
Target Start/End: Original strand, 52413197 - 52413258
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||||| ||| | |||||| |||||| | ||| |||||||||||||||||||||||||    
T  52413197 tatgaaaatagtttcattttattctatcttttgttataaaaatagcttatacataagcactt 52413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 12923412 - 12923464
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||||| | |||||  ||||||||||||| ||||||||||    
T  12923412 tttgactttattttatcttttattacagcaatagcttatacacaagcacttat 12923464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 32064508 - 32064444
Alignment:
Q  270 gatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaac 334  Q
    ||||| |||||||| ||||||||||||||||||||||| | ||||  |||| ||||||| |||||    
T  32064508 gatatatccataaactgttttcaacttattttcataagctctttaggatagtttatgaacacaac 32064444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 41724299 - 41724251
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttattt 369  Q
    |||||| |||||||| |||||| ||| ||||||||||||||||||||||    
T  41724299 cttatggaaacaacttatgacatgtccataagttgttttcagcttattt 41724251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 905042 - 905109
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||| ||| || |||||||||||||||||| | ||| | ||||||||||||| ||||| |||||    
T  905042 cttatatgcaaacaaattgactttattttatcttttgttatagaaatagcttatacttaagcgcttat 905109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 20349548 - 20349615
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||| ||||| |||||||| | | ||||  |||||||||||||| || |||||||    
T  20349548 cttatatgaaaataattagacttcattttatcctttgttactgaaatagcttatacacaaacacttat 20349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 22232824 - 22232757
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | ||||||||||||||||| | | ||| | ||||||||||||||| |||| ||||    
T  22232824 cttatatgaaaacagtttgactttattttatcatttgttatataaatagcttatacatgagcatttat 22232757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 28779354 - 28779287
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||| ||||||||||||| ||||  | ||| ||||| |||||||||| ||||| ||||    
T  28779354 cttatatgaaaatagtttgactttatttcatctgatgttataaaaacagcttatacaaaagcaattat 28779287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Complemental strand, 32703136 - 32703077
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||||||||| ||||||| ||||||||||||| | | | | |||||||||||||||||    
T  32703136 cttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataa 32703077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 37273220 - 37273141
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||| ||||| ||| ||| ||||||||||  |||||||||||||||| |||||| | |  || ||||||||||||||||    
T  37273220 ttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaaca 37273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 41028939 - 41028990
Alignment:
Q  426 ttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||| |||| | ||| | |||||||||||||||||||||||||    
T  41028939 ttgactttattttttcttttgttatagaaatagcttatacataagcacttat 41028990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 49586988 - 49587054
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | ||||||||||||||||||| | ||| | ||||||||||||  |||||||||||    
T  49586988 cttatatgaaaacagtttgactttattttatcttttgttatagaaatagcttata-gtaagcacttat 49587054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 369
Target Start/End: Original strand, 3015824 - 3015874
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttattt 369  Q
    ||||||||||||||||| |||||| ||| ||||| |||||||| |||||||    
T  3015824 agcttatgaaaacaacttatgacatgtccataagatgttttcatcttattt 3015874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 3015827 - 3015881
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    ||||||||||| ||| ||| |||||||||| ||||||||| |||||||| |||||    
T  3015827 ttatgaaaacaacttatgacatgtccataagatgttttcatcttattttaataag 3015881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 24281133 - 24281079
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    ||||||||||| ||| |||||| |||||||  ||||||||||||| |||||||||    
T  24281133 ttatgaaaacaacttatgatatctccataagttgttttcaacttactttcataag 24281079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 443
Target Start/End: Complemental strand, 25195419 - 25195389
Alignment:
Q  413 atatgaaaataatttgactttattttatctt 443  Q
    |||||||||||||||||||||||||||||||    
T  25195419 atatgaaaataatttgactttattttatctt 25195389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 27290882 - 27290936
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccat 373  Q
    |||||||||||||| || |||||| | | ||||| ||||||||||||||||||||    
T  27290882 agcttatgaaaacagcttatgacatgcccataagctgttttcagcttatttccat 27290936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 34383028 - 34382946
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||| |||||| || ||||||||| ||||  |||||||| ||||||||| |||| |||| |  |||||||||||||| ||||    
T  34383028 ttatggaaacagattatgatatgtctataagttgttttcatcttattttcttaagcttttcaggatagcttatgaaaagaact 34382946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 42745124 - 42745070
Alignment:
Q  322 ttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||| |||||||| |||||| ||  |||||||||||||| ||||||||||||||    
T  42745124 ttatgtaaacaacttatgacatgttcataagttgttttcatcttatttccataag 42745070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 426 - 476
Target Start/End: Original strand, 49546575 - 49546625
Alignment:
Q  426 ttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||||||||| | ||| ||||||| |||| |||||||||||||    
T  49546575 ttgactttattttatcttttgttataaaaatatcttacacataagcactta 49546625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 11039320 - 11039377
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| |||||  | |||||| ||| |||||||||||||||||||| ||||||||    
T  11039320 agcttatggaaacatattatgacatgtccataagttgttttcagcttatctccataag 11039377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 21574579 - 21574522
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||||||||||||||| |||||| ||  ||||| || ||| ||||||||||||||||    
T  21574579 agcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataag 21574522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 31010491 - 31010434
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||  |||||||| |||||| ||| ||||| ||||||||||||| |||||||||    
T  31010491 agcttatagaaacaacttatgacatgtccataagctgttttcagcttaattccataag 31010434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 32555053 - 32555086
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||| |||||||||||||||||||||||||||    
T  32555053 cttataggaaaataatttgactttattttatctt 32555086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 37825193 - 37825144
Alignment:
Q  337 atgacacgtcgataagttgttttcagcttatttccataagttttccagga 386  Q
    |||||| ||| ||||||||||||||| ||||||||||||| | |||||||    
T  37825193 atgacatgtccataagttgttttcaggttatttccataagctctccagga 37825144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 38462277 - 38462212
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||| | ||||||||||||||||||| |  || | |||||||||||| |||| |||||||    
T  38462277 tatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttat 38462212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 467
Target Start/End: Complemental strand, 42809299 - 42809242
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacat 467  Q
    |||||||||||| ||||| ||| ||||||||||| | ||| | |||||||||||||||    
T  42809299 cttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 467
Target Start/End: Complemental strand, 48397636 - 48397587
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttatacat 467  Q
    |||| ||||||||||||||||||||| | ||| ||||||| |||||||||    
T  48397636 aaaacaatttgactttattttatcttttattataaaaataacttatacat 48397587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Original strand, 53736185 - 53736250
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||||||||| |||||| |||||||||||| | ||| | ||||| || |||| |||||||||    
T  53736185 cttatatgaaaatagtttgacattattttatcttttgttatagaaataactcatacgtaagcactt 53736250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 2304202 - 2304262
Alignment:
Q  191 cttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaa 251  Q
    ||||||||| || ||||||| ||||||||| ||| |||||||||||| |||  ||||||||    
T  2304202 cttatttgaactgatctactagcataaacacttgtgaaactatttgagagaaattatgaaa 2304262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Original strand, 5292530 - 5292558
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  5292530 ataagttgttttcagcttatttccataag 5292558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Complemental strand, 13371177 - 13371149
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  13371177 ataagttgttttcagcttatttccataag 13371149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 463
Target Start/End: Original strand, 15304420 - 15304472
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttat 463  Q
    ||||||||||| ||||| ||||||||||||||| | ||| | |||||||||||    
T  15304420 ttatatgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Original strand, 21862185 - 21862213
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  21862185 ataagttgttttcagcttatttccataag 21862213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 21872343 - 21872403
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    ||||||| |||| |||||||| ||||||||||| || ||| |||||| |||||| ||||||    
T  21872343 cttatatcaaaaaaatttgaccttattttatctcctattataaaaatggcttatgcataag 21872403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 24624299 - 24624231
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||||||||||| || |||||| ||| ||||  |||||||||||||||  |||||| |||| |||||    
T  24624299 agcttatgaaaacagcttatgacatgtccataaactgttttcagcttattaacataagatttctaggat 24624231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 27795944 - 27796000
Alignment:
Q  191 cttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttat 247  Q
    |||||||||||||||||||| |||||| || ||| |||||| ||| | |||||||||    
T  27795944 cttatttgagcttatctactggcataagcacttgtgaaactgtttaagagagcttat 27796000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 29771918 - 29771870
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| | |||| ||| |||||||||||||| ||||||||||||||    
T  29771918 aaacaacttaggacatgtccataagttgttttcaacttatttccataag 29771870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 475
Target Start/End: Complemental strand, 37788857 - 37788794
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    ||||| |||||||||| |||||||||||||||| | |||  |||||| ||||||||||| |||||    
T  37788857 ttatacgaaaataattggactttattttatcttttgtta-taaaataacttatacataaacactt 37788794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Complemental strand, 38462341 - 38462313
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  38462341 ataagttgttttcagcttatttccataag 38462313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 39980781 - 39980733
Alignment:
Q  287 ttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||||||||||||| | |  |||||||||||| |||||||||    
T  39980781 ttttcaacttattttcataagttctccaatatagcttataaaaacaact 39980733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 40122828 - 40122884
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    |||||||| | ||||||||||||||||||| | |||   ||||||||||||||||||    
T  40122828 tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 41671364 - 41671320
Alignment:
Q  285 tgttttcaacttattttcataagatttttaatatagcttatgaaa 329  Q
    ||||||||||||||||||||||  |||| || |||||||||||||    
T  41671364 tgttttcaacttattttcataaatttttcaagatagcttatgaaa 41671320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Original strand, 45432949 - 45432977
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  45432949 ataagttgttttcagcttatttccataag 45432977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 1146 - 1213
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||||||||    
T  1146 cttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttat 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 2829 - 2762
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||||||||    
T  2829 cttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttat 2762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 475
Target Start/End: Original strand, 41620365 - 41620428
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||    
T  41620365 tatatgaacataatttgactttattttatcttttgttacaaaaataacttatatataagcactt 41620428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 6950411 - 6950354
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| |||||||  |||||| |||||||||||||||||||||||||||||||||    
T  6950411 agcttatgtaaacaacctatgacatgtcgataagttgttttcagcttatttccataag 6950354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 4558794 - 4558730
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||||||| ||||||||||||||| | ||| | ||||||||||||||||| ||||||    
T  4558794 tatatgaaaataatttaactttattttatcttttattatagaaatagcttatacataaacactta 4558730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 9700144 - 9700080
Alignment:
Q  187 ttaacttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaa 251  Q
    |||||||||||||||||||||||| ||||||||| ||| || ||||||||| ||||||| |||||    
T  9700144 ttaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaa 9700080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 410 - 467
Target Start/End: Original strand, 1470928 - 1470985
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacat 467  Q
    ||||||||||| |||||||||||||||||||||| | ||| | |||||||||||||||    
T  1470928 cttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 3645888 - 3645955
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||| ||||| ||| |||||| || ||||| | |||||||||||||| ||||||||||    
T  3645888 cttatatgaaaatagtttgattttgttttatattttcttatagaaatagcttatacacaagcacttat 3645955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 7026729 - 7026662
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||| ||||||||||||||| | ||| || | |||||||| |||||||||||||    
T  7026729 cttatatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttat 7026662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 477
Target Start/End: Complemental strand, 14482192 - 14482133
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||| ||||||||||||||||||||| | ||| | |||||| ||||||||||||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttat 14482133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 445
Target Start/End: Original strand, 29262946 - 29262981
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttct 445  Q
    ||||||||||||||||||||||||||||||||||||    
T  29262946 cttatatgaaaataatttgactttattttatcttct 29262981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 476
Target Start/End: Original strand, 787178 - 787244
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||||| || ||||||||||||||||||||| | ||||  ||| |||||| |||||||||||||    
T  787178 cttatatgataacaatttgactttattttatcttatgttacggaaacagcttaaacataagcactta 787244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 11183634 - 11183568
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccagg 385  Q
    ||||||| ||||||||| |||| | ||| ||||| ||||||||||||||||||||||| | ||||||    
T  11183634 agcttataaaaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagg 11183568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 477
Target Start/End: Complemental strand, 26215493 - 26215427
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||| ||||||| ||| ||||||||||||||| | ||| | ||||||||||||||||||| |||||    
T  26215493 ttatacgaaaatagtttaactttattttatcttttgttatagaaatagcttatacataagcgcttat 26215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 27119912 - 27119962
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttcc 371  Q
    ||||||||||| ||| |||||| ||| ||||||||||||||||||||||||    
T  27119912 cttatgaaaaccactaatgacatgtctataagttgttttcagcttatttcc 27119962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 29973079 - 29973013
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||| |||||||| ||||||||||||||| ||| | ||| | |||||||||||| |||||||||||    
T  29973079 cttatgtgaaaatagtttgactttattttaccttgtgttaaagaaatagcttatatataagcactta 29973013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 42597394 - 42597332
Alignment:
Q  415 atgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||| ||||| ||||||||||||||| | ||| | |||||||||||||||||| ||||||    
T  42597394 atgaaaacaattttactttattttatcttttgttatagaaatagcttatacataagtacttat 42597332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 30918201 - 30918145
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||  |||||  || |||||||||||||||||||||||||||||    
T  30918201 agcttatgaaaacaacttgtgacatttc-ataagttgttttcagcttatttccataag 30918145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 478
Target Start/End: Complemental strand, 7646196 - 7646136
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    |||| ||||| ||||||||||| ||| ||||| | ||||||||||||||||| ||||||||    
T  7646196 aaaacaatttaactttattttaccttttcttatagaaatagcttatacataaccacttatt 7646136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 14949955 - 14949899
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||||||||||| |||| |||||| ||| ||||| ||||||||||||||||| ||||    
T  14949955 agcttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataa 14949899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 25869251 - 25869303
Alignment:
Q  323 tatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||| ||| |||| |||||| ||| ||||||||||||||||||||||||||||    
T  25869251 tatggaaataacttatgacatgtccataagttgttttcagcttatttccataa 25869303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 30259203 - 30259139
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttcca 383  Q
    |||||||| ||||| || |||| | ||| ||||||||||||||| ||||||||||||||| ||||    
T  30259203 agcttatggaaacagcttatgatatgtctataagttgttttcagtttatttccataagttctcca 30259139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 466
Target Start/End: Original strand, 31315533 - 31315581
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttataca 466  Q
    |||||| ||||||||||||||||||| | ||| ||||||||||||||||    
T  31315533 aaaatagtttgactttattttatcttttattataaaaatagcttataca 31315581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 35298565 - 35298617
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||| |||||||||||||| | ||||  |||||||||||||||||||||||||    
T  35298565 tttggctttattttatcttttgttactgaaatagcttatacataagcacttat 35298617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 40356854 - 40356802
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||||| | ||| | |||||||||||| ||||||||||||    
T  40356854 tttgactttattttatcttttattatataaatagcttatagataagcacttat 40356802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 10075480 - 10075547
Alignment:
Q  187 ttaacttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaatt 254  Q
    |||||||||||||| ||||||||| ||||||| | |||||| ||| ||| | |||||||||| |||||    
T  10075480 ttaacttatttgagtttatctactggcataaatacttgcgagactgtttaagagagcttatggaaatt 10075547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 376
Target Start/End: Original strand, 13000415 - 13000462
Alignment:
Q  329 aacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||||| |||||| ||| | |||||||||||||||||||||||||||    
T  13000415 aacaacttatgacatgtccacaagttgttttcagcttatttccataag 13000462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 388
Target Start/End: Complemental strand, 44401616 - 44401581
Alignment:
Q  353 ttgttttcagcttatttccataagttttccaggatg 388  Q
    |||||||||||||||||||||||||| |||||||||    
T  44401616 ttgttttcagcttatttccataagttctccaggatg 44401581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 21653066 - 21653012
Alignment:
Q  423 aatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||| ||||||||||||||| | ||||| ||||||| ||||||||||| |||||    
T  21653066 aatttaactttattttatcttttgttacataaatagcctatacataagcgcttat 21653012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 26473736 - 26473818
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||||||| ||| ||||| ||||  |  ||| |||||||||||||||| | | ||  |||||||||||||||||||    
T  26473736 ttatgaaaacagcttatgacatgtctataagctagttttaacttattttcataagctctctaggatagcttatgaaaacaact 26473818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 477
Target Start/End: Original strand, 29417777 - 29417842
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||| |||||||  |||| ||||||| ||||| | |||||||||||||||||||| ||||||||||    
T  29417777 ttatacgaaaataggttgattttatttgatctttt-ttacaaaaatagcttatacaaaagcacttat 29417842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 1112851 - 1112786
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    ||||| |||||| ||||| || |||||||||||| | ||| | ||||||| |||||||||||||||    
T  1112851 cttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacataagcactt 1112786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 2100803 - 2100770
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||||| |||||||||||||||||||    
T  2100803 cttatatgaaaatattttgactttattttatctt 2100770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 10062072 - 10062129
Alignment:
Q  191 cttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatg 248  Q
    ||||||||||||||||||||  ||| |||| || ||||||||||||  ||||||||||    
T  10062072 cttatttgagcttatctactaacatcaacacttacgaaactatttgggagagcttatg 10062129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 468
Target Start/End: Original strand, 13561385 - 13561442
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacata 468  Q
    ||||||||||| ||||||||||||||| || |||| ||| | ||||||||||| ||||    
T  13561385 ttatatgaaaacaatttgactttatttaattttctgttatagaaatagcttattcata 13561442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 26479874 - 26479817
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| |||||||| ||| || ||| ||||||| |||||||| ||||||||||||    
T  26479874 agcttatggaaacaacttatgtcatgtctataagtttttttcagcgtatttccataag 26479817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 468
Target Start/End: Original strand, 27728094 - 27728151
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacata 468  Q
    ||||||||||||| ||||||||||||||||||| | ||| | ||||||| | ||||||    
T  27728094 ttatatgaaaatagtttgactttattttatctttttttatagaaatagcctgtacata 27728151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 35749579 - 35749636
Alignment:
Q  278 cataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    |||||| | |||||||| |||||||||||| | ||||| |||||||||| ||||||||    
T  35749579 cataaacttttttcaacatattttcataagttctttaagatagcttatggaaacaact 35749636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 4762569 - 4762513
Alignment:
Q  279 ataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||| |||||||| ||||||| |||||| | || || |||||||||||||||||||    
T  4762569 ataaattgttttcagcttatttacataagctcttcaagatagcttatgaaaacaact 4762513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 8066751 - 8066807
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    ||||||||||||   ||||||||| ||| ||||||| |||||||||||||| |||||    
T  8066751 agcttatgaaaatcgctgatgacatgtccataagtttttttcagcttattttcataa 8066807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 11770995 - 11771055
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagattttt 313  Q
    ||||||||||| ||| ||||||||| |||   ||||||||||||||||| ||||| |||||    
T  11770995 ttatgaaaacaacttatgatatgtctatacgttgttttcaacttatttttataagtttttt 11771055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 477
Target Start/End: Original strand, 26716518 - 26716575
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||||||| ||||  | ||| | || ||||||||||||||||||||||    
T  26716518 aaaataatttgactttatttaatct--tgttatagaagtagcttatacataagcacttat 26716575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 26717253 - 26717188
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||| |||||||| ||||||||||||||||||  | ||| |||| |||||||| || ||||||||||    
T  26717253 cttatttgaaaatagtttgactttattttatct--tgttataaaattagcttattcagaagcacttat 26717188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 27158109 - 27158153
Alignment:
Q  326 gaaaacaactgatgacacgtcgataagttgttttcagcttatttc 370  Q
    |||||||||| ||||||| || ||||||||||||||||| |||||    
T  27158109 gaaaacaacttatgacacctccataagttgttttcagctcatttc 27158153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 30191122 - 30191178
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||||||| |||||||| |||||| ||  | || |||||||||||||||||||||||    
T  30191122 agcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttccataa 30191178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 35534948 - 35535000
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||| ||| | ||| | |||||||||||| ||||||||||||    
T  35534948 tttgactttattttaacttttattatagaaatagcttatatataagcacttat 35535000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 8e-16; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 414 - 477
Target Start/End: Complemental strand, 7022662 - 7022599
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||||||||||    
T  7022662 tatgaaaataatttgactctattttatcttttcttataaaaatagcttataattaagcacttat 7022599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 457
Target Start/End: Complemental strand, 11917556 - 11917510
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaata 457  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  11917556 ttatatgaaaataatttgactttattttatcttttgttacaaaaata 11917510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 477
Target Start/End: Original strand, 42321952 - 42322018
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||| ||||||||||||||||||| | | ||| ||||||||||||| ||||| |||||||    
T  42321952 ttatatgaaaacaatttgactttattttatcatttgttataaaaatagcttattcataaacacttat 42322018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 477
Target Start/End: Complemental strand, 47970310 - 47970249
Alignment:
Q  416 tgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||| |||||||| |||||||||| | ||| | |||||||||||||||||||||||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttat 47970249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 3176085 - 3176141
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||||||||||||| || ||| || ||| ||||||||||||||||||||||||||||    
T  3176085 agcttatgaaaacatcttatgtcatgtctataagttgttttcagcttatttccataa 3176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 473
Target Start/End: Original strand, 8422911 - 8422972
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcac 473  Q
    |||||||||||| |||  |||||||||||||||| | ||| |||||||||||||||||||||||    
T  8422911 cttatatgaaaacaat--gactttattttatctttttttataaaaatagcttatacataagcac 8422972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 462
Target Start/End: Complemental strand, 52735120 - 52735068
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagctta 462  Q
    ||||||||||| |||||||||||||||||||||| | ||||| ||||||||||    
T  52735120 cttatatgaaagtaatttgactttattttatcttttgttacagaaatagctta 52735068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 4071880 - 4071814
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||||||||||||||||||||| | ||| | |||||| ||||| |||| |||||||    
T  4071880 cttatatgaaaataatttgactttattttatcttttgttatagaaatag-ttatatataaacacttat 4071814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 387
Target Start/End: Complemental strand, 43824343 - 43824304
Alignment:
Q  348 ataagttgttttcagcttatttccataagttttccaggat 387  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  43824343 ataagttgttttcagcttatttccataagctttccaggat 43824304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 2996659 - 2996577
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||| ||| ||| ||||||||||  | ||||||||||||||||||| | | |  || |||||||||||||||||||    
T  2996659 ttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaact 2996577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 477
Target Start/End: Complemental strand, 36734890 - 36734824
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||| ||||||||||||||| ||| | ||| | ||| || ||||||||||||||||||    
T  36734890 ttatatgaaaatagtttgactttattttaccttttgttatagaaagagattatacataagcacttat 36734824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 477
Target Start/End: Original strand, 51555956 - 51556006
Alignment:
Q  427 tgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||| | ||| || ||||||||||||||||||||||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttat 51556006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 322 - 375
Target Start/End: Complemental strand, 2841712 - 2841659
Alignment:
Q  322 ttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||||||| ||||| |||||| ||| |||||||||||||||||||| |||||||    
T  2841712 ttatgaaagcaacttatgacatgtcaataagttgttttcagcttatatccataa 2841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 9680660 - 9680595
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||| || ||||||||||||||||||||| | |||   |||||||||||||||||||| ||||    
T  9680660 tatatgagaacaatttgactttattttatcttttattatcgaaatagcttatacataagcatttat 9680595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 27123333 - 27123390
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| |||||||| |||||| |||  ||||||||||||| ||||||||||||||    
T  27123333 agcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataag 27123390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 477
Target Start/End: Complemental strand, 4191734 - 4191670
Alignment:
Q  414 tatgaaaataatttgactttatttt-atcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||| | |||||||||||||| ||||| | ||| | |||||||||||||||||||||||||    
T  4191734 tatgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttat 4191670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 477
Target Start/End: Complemental strand, 20907152 - 20907104
Alignment:
Q  429 actttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||| ||||| | ||||||||||||||||| |||||||    
T  20907152 actttattttatcttttcttatacaaatagcttatacataaacacttat 20907104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 474
Target Start/End: Complemental strand, 32724117 - 32724053
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcact 474  Q
    |||||||||||||| ||||||||||||||||||| | | | | |||||| ||| |||||||||||    
T  32724117 cttatatgaaaatagtttgactttattttatcttttgtaatagaaatagattagacataagcact 32724053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 474
Target Start/End: Complemental strand, 49219137 - 49219073
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcact 474  Q
    ||||||||||||||||||||||||||||||| || | ||| | ||||| ||||||| ||| ||||    
T  49219137 cttatatgaaaataatttgactttattttatattttgttatagaaataacttatacctaaccact 49219073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 376
Target Start/End: Complemental strand, 1137799 - 1137744
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||||| || |||||| ||  ||||||||||||||| |||||||||||||    
T  1137799 cttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataag 1137744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 387
Target Start/End: Original strand, 5131260 - 5131299
Alignment:
Q  348 ataagttgttttcagcttatttccataagttttccaggat 387  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  5131260 ataagttgttttcagcttatttccataagctctccaggat 5131299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 8130172 - 8130105
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||||||||||||| ||||||| | ||| | ||| | || |||| |||||||||||    
T  8130172 cttatatgaaaataatttgactttatgttatcttttgttatagaaagaactcatacgtaagcacttat 8130105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 22684588 - 22684655
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||||||||||||||| | | | ||| | |||||||||||||| ||||| ||||    
T  22684588 cttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttat 22684655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 23819171 - 23819096
Alignment:
Q  257 gaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||||||||| ||| ||||||||||  |||||||| |||||||  ||||| | || || ||||||||||||||||    
T  23819171 gaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaaca 23819096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 26883993 - 26883926
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||| |||| |||||||||  ||||| | ||||| ||||||||||| |||||||    
T  26883993 cttatatgaaaacaatttaacttcattttatctcttcttagagaaataacttatacataatcacttat 26883926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 30024698 - 30024631
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||| ||||||||||||||| | ||| | ||||| ||||| |||||| ||||||    
T  30024698 cttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttat 30024631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Complemental strand, 40865807 - 40865749
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||||||||||| |||||||||||| |||||| | ||| |||||||| ||||||||||    
T  40865807 cttatatgaaaata-tttgactttattctatcttttgttagaaaaatagtttatacataa 40865749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 476
Target Start/End: Original strand, 51044546 - 51044597
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||||||||||||||| | ||| | ||||||||||||||||| ||||||    
T  51044546 tttgactttattttatcttttgttatagaaatagcttatacataaacactta 51044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 54325109 - 54325176
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | ||||||||||||||||||| | | | | |||||| ||||||| ||||||||||    
T  54325109 cttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttat 54325176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 679804 - 679750
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    ||||||||||| ||| |||||||| |||||| |||||||| | ||||||||||||    
T  679804 ttatgaaaacatcttatgatatgttcataaactgttttcagcatattttcataag 679750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 477
Target Start/End: Original strand, 5219573 - 5219639
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||| ||| ||||||||||||||| | ||| | | ||||| ||||||| |||||||||    
T  5219573 ttatatgaaaatagtttaactttattttatcttttattatagagatagcatatacatgagcacttat 5219639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 6428104 - 6428050
Alignment:
Q  322 ttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||||||| |||||| ||| |||||||| ||| ||| ||||||||||||    
T  6428104 ttatgaaaacaacttatgacatgtccataagttgatttaagcatatttccataag 6428050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 335
Target Start/End: Complemental strand, 11264367 - 11264305
Alignment:
Q  273 atgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||| |||||||||||||||| |||||| | | ||  || ||||||||||||||||    
T  11264367 atgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaaacaact 11264305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 338
Target Start/End: Complemental strand, 17884135 - 17884069
Alignment:
Q  272 tatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaactgat 338  Q
    ||||| |||||  |||||||| || ||||||||||| | |  |||||||||||||||||||||||||    
T  17884135 tatgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgat 17884069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 18512442 - 18512500
Alignment:
Q  187 ttaacttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagctt 245  Q
    ||||||||||||||||||||||||  |||||||| ||| || |||| |||| |||||||    
T  18512442 ttaacttatttgagcttatctactgacataaacacttgtgagactagttgaaagagctt 18512500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 476
Target Start/End: Original strand, 21593084 - 21593149
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||||| || ||||||||||||||||   ||| | |||||| |||||||||||||||||    
T  21593084 cttatatgaaaatagtt-gactttattttatctttagttatagaaatagtttatacataagcactta 21593149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 472
Target Start/End: Original strand, 25487617 - 25487679
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagca 472  Q
    |||||||||||| ||  |||||||||||||| || | ||| | ||||||||||||||||||||    
T  25487617 cttatatgaaaaaaacgtgactttattttattttttgttatagaaatagcttatacataagca 25487679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 477
Target Start/End: Complemental strand, 50745997 - 50745931
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||| |||| | ||||| ||||||||||||| | ||| |||||||||||| ||||||||| ||||    
T  50745997 ttatataaaaacagtttgattttattttatcttttgttataaaaatagcttagacataagcatttat 50745931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 440
Target Start/End: Original strand, 55437358 - 55437388
Alignment:
Q  410 cttatatgaaaataatttgactttattttat 440  Q
    |||||||||||||||||||||||||||||||    
T  55437358 cttatatgaaaataatttgactttattttat 55437388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 4471248 - 4471175
Alignment:
Q  259 aaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||| ||| ||| || |||||||  ||| ||||||||||||||| ||| |||| || ||||||||||||||||    
T  4471248 aaacaacttatgacatatccataagttgtattcaacttattttcagaagcttttcaagatagcttatgaaaaca 4471175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 463
Target Start/End: Complemental strand, 10192282 - 10192229
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttat 463  Q
    |||||||||||| |||||||||||||| |||||| | ||| |||||||| ||||    
T  10192282 cttatatgaaaacaatttgactttattctatcttttgttataaaaatagtttat 10192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 13949916 - 13949949
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||| |||||||||||||||||||||    
T  13949916 cttatatgaaaacaatttgactttattttatctt 13949949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 472
Target Start/End: Complemental strand, 24160983 - 24160926
Alignment:
Q  415 atgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagca 472  Q
    ||||||||||||| |||| |||||||| | | ||| | ||||||||||||||||||||    
T  24160983 atgaaaataatttaacttgattttatcctttgttatagaaatagcttatacataagca 24160926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 28300283 - 28300360
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaa 330  Q
    ||||||||||||| | ||| |||| | |||  ||||||||||||||||||||||| | || || ||||| ||||||||    
T  28300283 ttatgaaaacagcctatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaa 28300360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 471
Target Start/End: Original strand, 29373959 - 29374020
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagc 471  Q
    |||||||||| | | |||||| |||||||||||||| ||| | |||||||||||| ||||||    
T  29373959 cttatatgaatacattttgacattattttatcttctgttatagaaatagcttatatataagc 29374020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 33534150 - 33534207
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||||||||||||| |  |||||  || |||||||||||||||||||||| ||||||    
T  33534150 agcttatgaaaacaaattgtgacatatccataagttgttttcagcttattttcataag 33534207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 476
Target Start/End: Original strand, 39438621 - 39438674
Alignment:
Q  423 aatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||||||||||||||||| | ||| | |||||||||| |||| ||||||||    
T  39438621 aatttgactttattttatcttatgttatagaaatagcttacacatgagcactta 39438674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 45128291 - 45128348
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| |||||||||||  || ||| || || |||||||||||||||||||||||    
T  45128291 agcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataag 45128348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 55870269 - 55870334
Alignment:
Q  187 ttaacttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaa 252  Q
    |||||||||||||| ||||||| |  |||||||||||| || ||| ||||| | ||||||||||||    
T  55870269 ttaacttatttgagtttatctaatgacataaacatttgtgagactctttgagatagcttatgaaaa 55870334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 1966030 - 1965962
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    ||||||||||||||||| |||||| ||  ||||| |||||| | |||||||||| ||| |||| |||||    
T  1966030 agcttatgaaaacaacttatgacatgttcataagctgtttttaacttatttccagaagatttctaggat 1965962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 476
Target Start/End: Original strand, 4798649 - 4798697
Alignment:
Q  428 gactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||||||| |  || | ||||||||||||||||||||||||    
T  4798649 gactttattttatcttttgatatagaaatagcttatacataagcactta 4798697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 460
Target Start/End: Original strand, 6360780 - 6360828
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagct 460  Q
    ||||||||||  ||||||||||||||||||| || ||| ||||||||||    
T  6360780 tatatgaaaaagatttgactttattttatctcctgttataaaaatagct 6360828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 6364147 - 6364087
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    ||||| |||| | ||||| ||||||||||||||| | ||| | ||||||||||||||||||    
T  6364147 cttatgtgaacagaatttcactttattttatcttttgttatagaaatagcttatacataag 6364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 10172200 - 10172144
Alignment:
Q  192 ttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatg 248  Q
    |||||||||||||||||  ||||||| || ||| |||||| ||||||| ||||||||    
T  10172200 ttatttgagcttatctatatgcataagcacttgtgaaactgtttgatatagcttatg 10172144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 476
Target Start/End: Original strand, 15511425 - 15511473
Alignment:
Q  429 actttattttatcttctc-ttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||||||||  ||| ||||||| ||||||||||||||||||    
T  15511425 actttattttatcttcttgttataaaaataacttatacataagcactta 15511473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 469
Target Start/End: Complemental strand, 21193981 - 21193937
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    ||||||||||||||||||| |  || |||||||||||||||||||    
T  21193981 tttgactttattttatcttttactataaaaatagcttatacataa 21193937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 442
Target Start/End: Original strand, 31038939 - 31038971
Alignment:
Q  410 cttatatgaaaataatttgactttattttatct 442  Q
    |||||||||||| ||||||||||||||||||||    
T  31038939 cttatatgaaaacaatttgactttattttatct 31038971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 39691161 - 39691209
Alignment:
Q  287 ttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    |||||||||||||||| |||| | || |||||||||||| |||||||||    
T  39691161 ttttcaacttattttcgtaagttcttcaatatagcttataaaaacaact 39691209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 45128382 - 45128442
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    ||||||||| |||||||||| || |||||||||| | ||| | |||||| |||||||||||    
T  45128382 cttatatgagaataatttgatttgattttatcttttgttatagaaatagtttatacataag 45128442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 478
Target Start/End: Original strand, 46013372 - 46013440
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    ||||||| |||| | ||||||||||||||||||| | || || |||||| ||| |||||| ||||||||    
T  46013372 cttatataaaaacagtttgactttattttatcttttgttccagaaatagtttacacataaacacttatt 46013440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 50800020 - 50800064
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttcca 372  Q
    |||||||| |||||| ||| ||||| |||||||||||||||||||    
T  50800020 aaacaacttatgacatgtctataagctgttttcagcttatttcca 50800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 30751513 - 30751448
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||||||||||||||| || | |||||||||||| |||| || ||||||||||    
T  30751513 tatatgaaaataatttgactttattttatattttgttacaaaaatagtttattcacaagcacttat 30751448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 410 - 471
Target Start/End: Complemental strand, 35536105 - 35536044
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagc 471  Q
    |||||||||||| ||||||||||||||||||||| | ||| | |||||||||||||||||||    
T  35536105 cttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagc 35536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 8680986 - 8680931
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    ||||||||||||||||||||||| |||||| | ||||||||||| |||||||||||    
T  8680986 tatgaaaataatttgactttattatatcttttgttacaaaaataacttatacataa 8680931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 45593791 - 45593858
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | |||||||||||||||| || | ||||| |||||||||||||||||||| ||||    
T  45593791 cttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttat 45593858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 47134746 - 47134800
Alignment:
Q  327 aaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttc 381  Q
    ||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||    
T  47134746 aaaacaacttatgacacgtccataagttgttttcagcttattttcataagctttc 47134800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 411 - 472
Target Start/End: Original strand, 3501039 - 3501100
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagca 472  Q
    |||||||||||| |||||||||||||||||||| | ||| | || |||||||||||||||||    
T  3501039 ttatatgaaaatgatttgactttattttatcttttattatataattagcttatacataagca 3501100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 46082125 - 46082068
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||||||||||||||| |||||| | | |||||||||||||||||||||| ||||||    
T  46082125 agcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataag 46082068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 33894716 - 33894648
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||||||||||| |  |||||| ||| ||||||||||||||||||||||| ||||  ||||||||||    
T  33894716 agcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaactttccaggat 33894648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 469
Target Start/End: Complemental strand, 1417262 - 1417203
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||||||||| ||||||||||||||||||||| | ||| | |||||| ||||||||||    
T  1417262 cttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataa 1417203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 476
Target Start/End: Complemental strand, 5276207 - 5276156
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||||||| ||||||| | ||| ||||||||||||||||||||||||||    
T  5276207 tttgactttatgttatcttttgttataaaaatagcttatacataagcactta 5276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 12234868 - 12234927
Alignment:
Q  317 atagcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||  |||||||| |||||| ||| ||||| |||||||||||||||||||||||    
T  12234868 atagcttatagaaacaacttatgacatgtctataagctgttttcagcttatttccataag 12234927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 30134047 - 30133980
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||| ||||| || |||||||||||||||||| | ||  ||||||||||||||||||| |||||||    
T  30134047 cttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataaacacttat 30133980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 46104550 - 46104633
Alignment:
Q  252 attatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    |||||||||||| ||  ||| ||||| ||||||||||| || |||||||||||||| | || |  |||||||||||||||||||    
T  46104550 attatgaaaacaactcatgacatgtcaataaaatgtttccagcttattttcataagctcttcagcatagcttatgaaaacaact 46104633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 469
Target Start/End: Complemental strand, 49060538 - 49060479
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    ||||||| ||||||||||||||||||||||| || | ||| | |||||||||||||||||    
T  49060538 cttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataa 49060479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 13960654 - 13960715
Alignment:
Q  190 acttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaa 252  Q
    ||||||||||||||||| | |||||||| || |||||| ||||||||| ||||||||||||||    
T  13960654 acttatttgagcttatcca-ttgcataagcacttgcgagactatttgagagagcttatgaaaa 13960715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 33871381 - 33871335
Alignment:
Q  190 acttatttgagcttatctacttgcataaacatttgcgaaactatttg 236  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||||    
T  33871381 acttttttgagcttatctacttacataaacacttgcgaaactatttg 33871335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 33894620 - 33894555
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||| | |||||||| |||||||||| | ||| | ||||||||||||||||||||||||    
T  33894620 cttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcactta 33894555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 335
Target Start/End: Original strand, 40530413 - 40530475
Alignment:
Q  273 atgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||| ||||| ||||||||||||||||||||||| | ||||  ||||||||| |||||||||    
T  40530413 atgtctataaattgttttcaacttattttcataagttctttaggatagcttattaaaacaact 40530475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 335
Target Start/End: Original strand, 44151484 - 44151546
Alignment:
Q  273 atgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    |||||||||| ||||||||| ||||||| |||||| |||| || |||| ||||||||||||||    
T  44151484 atgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaact 44151546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 24973940 - 24973875
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||| ||| ||||||| ||||||||||||| | ||| | ||||||||| |||||||||||||||    
T  24973940 tatatggaaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcacttat 24973875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 33645942 - 33645999
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| |||||||| |||||| ||| |||||||||||| || |||||||||||||    
T  33645942 agcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataag 33645999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 43854972 - 43855033
Alignment:
Q  191 cttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaa 252  Q
    ||||||||| ||||||||||  ||||| ||||||||| ||||||||  ||||||||||||||    
T  43854972 cttatttgaacttatctactaacataagcatttgcgacactatttgggagagcttatgaaaa 43855033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 27121658 - 27121718
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    |||||||||||| ||||||||||||||||||| | | ||| | ||||| ||||||||||||    
T  27121658 cttatatgaaaacaatttgactttattttatcatttattatagaaatatcttatacataag 27121718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 28691819 - 28691899
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaa 333  Q
    ||||||||||||||| |||  |||||||||| |||| |||  ||||||||||||||| |  |  |||||||||||||||||    
T  28691819 ttatgaaaacagcttatgacttgtccataaattgttatcagtttattttcataagatctccaggatagcttatgaaaacaa 28691899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 39551532 - 39551592
Alignment:
Q  322 ttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttcc 382  Q
    ||||| |||||||| |||||| ||| ||||| |||| |||||||||||||||||| |||||    
T  39551532 ttatggaaacaacttatgacatgtccataaggtgttgtcagcttatttccataagctttcc 39551592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 477
Target Start/End: Complemental strand, 7244696 - 7244633
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||| | ||||||||| ||||||||| |  || | |||||||||||||||||||||||||    
T  7244696 tatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttat 7244633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 12792428 - 12792491
Alignment:
Q  190 acttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaat 253  Q
    |||||||| | ||||||||||| |||||||| ||| || ||||||| |||||||||| ||||||    
T  12792428 acttatttcaacttatctacttacataaacacttgagagactatttaatagagcttaagaaaat 12792491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 28340916 - 28340983
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||| || |||||||||| |||| ||||| | ||| ||||||||| |||| ||||||||||||    
T  28340916 cttatatgacaacaatttgacttcatttcatcttttattataaaaatagcatatagataagcacttat 28340983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 378
Target Start/End: Complemental strand, 28844579 - 28844520
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagtt 378  Q
    ||||| ||||||||||| |||||| ||| || |||||||||||| ||||||| |||||||    
T  28844579 agcttctgaaaacaacttatgacatgtccatcagttgttttcagtttatttcgataagtt 28844520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 472
Target Start/End: Complemental strand, 31341177 - 31341130
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagca 472  Q
    ||||||||||||||||||| | ||| | ||||||||||||||||||||    
T  31341177 tttgactttattttatcttttgttatacaaatagcttatacataagca 31341130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 468
Target Start/End: Original strand, 5006581 - 5006639
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacata 468  Q
    |||||||||||| | ||||||||||||||||||| | ||| |  |||||||||||||||    
T  5006581 cttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 477
Target Start/End: Complemental strand, 5269519 - 5269461
Alignment:
Q  419 aaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||||||||||| | ||| | |||||  ||||| ||||||||||||    
T  5269519 aaataatttgactttattttatcttttattaaagaaataatttatatataagcacttat 5269461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 5373223 - 5373157
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||| |||||  || |||||||||||||||| | ||| | ||||||| ||||||||||||||||    
T  5373223 cttatataaaaatgtttggactttattttatcttttgttatagaaatagcatatacataagcactta 5373157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 477
Target Start/End: Complemental strand, 8445275 - 8445217
Alignment:
Q  419 aaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||| ||||| |||||||||||||| | ||| |||||||||||||| | ||||||||||    
T  8445275 aaatcatttgtctttattttatcttttgttataaaaatagcttataaacaagcacttat 8445217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 15740539 - 15740593
Alignment:
Q  253 ttatgaaaacagcttttgat-atgtccataaaatgttttcaacttattttcataa 306  Q
    ||||||||||||||| |||  ||||||||||  ||||||||||||||||||||||    
T  15740539 ttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttcataa 15740593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 27626107 - 27626161
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    ||||| ||||||||| ||| ||||||||||| |||||| ||||||||| ||||||    
T  27626107 ttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataag 27626161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 28165089 - 28165023
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||| |||| |||||||||| |||||||||| | ||| | ||| | ||||||||||||||||||    
T  28165089 cttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 477
Target Start/End: Complemental strand, 30496701 - 30496635
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||| ||||| |||||||||||||||||| || | ||| | |||||| |||||||||| |||||||    
T  30496701 ttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacataaacacttat 30496635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 31002759 - 31002693
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||||| ||||||||||||||||||| | |     |||||| |||||||||||||||||    
T  31002759 cttatatgaaaatattttgactttattttatcttttgtggttgaaatagtttatacataagcactta 31002693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 34754791 - 34754845
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccat 373  Q
    |||||| ||||||| || |||||| | | ||||||||||||||||||||||||||    
T  34754791 agcttaagaaaacatcttatgacaagcctataagttgttttcagcttatttccat 34754845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 464
Target Start/End: Original strand, 39591539 - 39591593
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttata 464  Q
    |||||||||||| ||||||||||||||||||||| | ||| | ||||| ||||||    
T  39591539 cttatatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 473
Target Start/End: Original strand, 45813253 - 45813315
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcac 473  Q
    ||||||||||| || |||||||||||||||||| |  || | |||||||||||| ||||||||    
T  45813253 ttatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataagcac 45813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 46091736 - 46091670
Alignment:
Q  187 ttaacttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaat 253  Q
    |||||||||||||||| ||||| | | |||| |||||| || |||| |||||||| |||||||||||    
T  46091736 ttaacttatttgagctcatctaatagtataagcatttgtgagactaattgatagaacttatgaaaat 46091670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 478
Target Start/End: Complemental strand, 1423129 - 1423076
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    ||||| ||||||||||||| | |||  |||||||||||||||||| ||||||||    
T  1423129 tttgaatttattttatcttttgttatgaaaatagcttatacataatcacttatt 1423076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 8094445 - 8094384
Alignment:
Q  191 cttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaa 252  Q
    |||||||||||||||||||| |||||| || ||| || ||||||||| |||  |||||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaa 8094384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 23918955 - 23918922
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||| |||||||||||||||||||||    
T  23918955 cttatatgaaaacaatttgactttattttatctt 23918922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 375
Target Start/End: Original strand, 24363601 - 24363638
Alignment:
Q  338 tgacacgtcgataagttgttttcagcttatttccataa 375  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataa 24363638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 467
Target Start/End: Complemental strand, 28178963 - 28178910
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacat 467  Q
    |||||||| ||| ||||||||||||||||| | ||| | |||||||||||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 30456522 - 30456555
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||| |||||||||||||||||||||    
T  30456522 cttatatgaaaacaatttgactttattttatctt 30456555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 476
Target Start/End: Complemental strand, 31149640 - 31149579
Alignment:
Q  416 tgaaaataatttgactttattttatcttctcttacaaaaat-agcttatacataagcactta 476  Q
    |||||||||||| ||||||||||||||| | ||| || ||| |||||||||||||| |||||    
T  31149640 tgaaaataattttactttattttatcttttgttataataataagcttatacataagaactta 31149579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 476
Target Start/End: Complemental strand, 31167932 - 31167871
Alignment:
Q  416 tgaaaataatttgactttattttatcttctcttacaaaaat-agcttatacataagcactta 476  Q
    |||||||||||| ||||||||||||||| | ||| || ||| |||||||||||||| |||||    
T  31167932 tgaaaataattttactttattttatcttttgttataataataagcttatacataagaactta 31167871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 304
Target Start/End: Complemental strand, 39370860 - 39370827
Alignment:
Q  271 atatgtccataaaatgttttcaacttattttcat 304  Q
    ||||||||||||| ||||||||||||||||||||    
T  39370860 atatgtccataaactgttttcaacttattttcat 39370827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 40689058 - 40689091
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||||||||| |||||||||||||||    
T  40689058 cttatatgaaaataatttaactttattttatctt 40689091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 46825096 - 46825063
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||| |||||||||||||||||||||    
T  46825096 cttatatgaaaacaatttgactttattttatctt 46825063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 48157101 - 48157158
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||  |||||||| ||| || ||| ||||| |||||||||||||||||||||||    
T  48157101 agcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataag 48157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 477
Target Start/End: Complemental strand, 2223143 - 2223079
Alignment:
Q  413 atatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||| |||| |||||||||||  |||||||| | ||| | ||||||||||||||||| |||||||    
T  2223143 atataaaaacaatttgacttttctttatcttttgttatagaaatagcttatacataaacacttat 2223079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 20881654 - 20881702
Alignment:
Q  287 ttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    |||||| |||||||||||||| | ||||| |||| ||||||||||||||    
T  20881654 ttttcagcttattttcataagttctttaagatagtttatgaaaacaact 20881702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 21247638 - 21247578
Alignment:
Q  192 ttatttgagcttatctacttgcataaacatttgcgaaactatttgatagagcttatgaaaa 252  Q
    ||||||||| |||||||| ||||||| || ||| |||||| ||||  ||||||||||||||    
T  21247638 ttatttgagtttatctacctgcataaccacttgtgaaactgtttgcaagagcttatgaaaa 21247578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 25670569 - 25670617
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttattt 369  Q
    ||||||||||||||| |||||| ||  |||| |||||||||||||||||    
T  25670569 cttatgaaaacaacttatgacatgttaataaattgttttcagcttattt 25670617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 477
Target Start/End: Original strand, 26935625 - 26935689
Alignment:
Q  413 atatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||| ||||| || |||||||||| | | ||| |||||||||||| ||| ||||||||||    
T  26935625 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat 26935689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 33678835 - 33678787
Alignment:
Q  284 atgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    |||||||||||||||||||| ||| |||  || ||||||||||||||||    
T  33678835 atgttttcaacttattttcacaagttttccaagatagcttatgaaaaca 33678787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 36874037 - 36874097
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    |||||| ||||||||||  | ||||||||||| | ||||| | ||||||||||||||||||    
T  36874037 cttataagaaaataattcaaatttattttatcatttcttatagaaatagcttatacataag 36874097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 42656505 - 42656453
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    ||||| |||||||||||||||||||| | ||| | |||||||||||| |||||    
T  42656505 aaaatgatttgactttattttatcttttgttatagaaatagcttatatataag 42656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 44615085 - 44615141
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    ||||||||||||||||| |||||| ||| | ||| ||||||||  ||||||||||||    
T  44615085 agcttatgaaaacaacttatgacatgtccacaagctgttttcacgttatttccataa 44615141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 10598 - 10654
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||||||| |||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  10598 agcttatgtaaacaactaatgacatgtccataagttgttttcagcttatttccataa 10654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 9202820 - 9202887
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||| ||||||||||||||| |  |||| |||||||||||| ||||||||||||    
T  9202820 cttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcacttat 9202887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 13604833 - 13604912
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||||||||||||| ||| |||||||||   ||||||||||||||||||||||| | || || ||| ||||||||||||    
T  13604833 ttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagataacttatgaaaaca 13604912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 32059661 - 32059727
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | |||||||||||||||||||   ||||||||| |||||||||||||||||||||    
T  32059661 cttatatgaaaacagtttgactttattttatcttag-ttacaaaaacagcttatacataagcacttat 32059727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 35135734 - 35135801
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||| ||||||||||||||||||| | ||| | ||||| ||||||||||| |||||||    
T  35135734 cttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttat 35135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 37063146 - 37063213
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||| ||||||||||||||||||| | ||| | |||||| ||||||||||||| ||||    
T  37063146 cttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataagcatttat 37063213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 475
Target Start/End: Original strand, 7096203 - 7096264
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||||  ||||||||||||||||||| | ||| | |||||||||||||||||||||||    
T  7096203 tatgaaaatggtttgactttattttatcttttgttatagaaatagcttatacataagcactt 7096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 38047929 - 38047986
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||||||||||||||||||||||||||||| | ||| | | |||||||||||||||    
T  38047929 tatatgaaaataatttgactttattttatcttttgttagagatatagcttatacataa 38047986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 21768181 - 21768260
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||||||||||||| ||| |||||||||   |||||||||||||||||| |||| | || || ||| ||||||||||||    
T  21768181 ttatgaaaacagcttatgacatgtccatacgctgttttcaacttattttcgtaagctcttcaagataacttatgaaaaca 21768260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 18700482 - 18700406
Alignment:
Q  310 ttttaatatagcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||| | |||||||| |||||||| |||||| ||| |||||||||||||||||| | |||||||| |||| |||||    
T  18700482 ttttaaaagagcttatggaaacaacttatgacatgtctataagttgttttcagctt-tatccataagctttcaaggat 18700406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 18704018 - 18704074
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||||||||| ||||| || ||| ||| |||||||||||||||||||||||||||||    
T  18704018 agcttatgaaa-caacttataacatgtctataagttgttttcagcttatttccataag 18704074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 4619796 - 4619732
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttcca 383  Q
    ||||||||||||||||| |||||| ||  ||||| || ||||| |||||||||||||||| ||||    
T  4619796 agcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataagttctcca 4619732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 477
Target Start/End: Original strand, 17756808 - 17756868
Alignment:
Q  417 gaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||| ||||||||||||||||||||||| ||| | ||| | || ||||||||||||||||    
T  17756808 gaaaacaatttgactttattttatcttctgttaaagaaacaactcatacataagcacttat 17756868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 41277422 - 41277490
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttac-aaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | |||||||||||||||||||   |||| ||||| ||||| |||||||||||||||    
T  41277422 cttatatgaaaacagtttgactttattttatctttgattacaaaaaaaagcttttacataagcacttat 41277490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 4855696 - 4855629
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||| || ||||| |||||||||||| || | ||| |||||||||| ||||||||| ||||||    
T  4855696 cttatatgataacaatttaactttattttattttttgttataaaaatagctaatacataagtacttat 4855629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 4991015 - 4991082
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||| ||||  |||| ||||||| | ||| |||||||||||||||| || |||||||    
T  4991015 cttatatgaaaataaattgatcttatgttatcttttgttataaaaatagcttatacacaaacacttat 4991082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 469
Target Start/End: Original strand, 5284762 - 5284805
Alignment:
Q  426 ttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||||||||||||||| | ||||||||||||| |||||||||    
T  5284762 ttgactttattttatcttttgttacaaaaatagcatatacataa 5284805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 10125701 - 10125756
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||| |||||||| |||||| || |||||| |||||||||||||||| ||||||    
T  10125701 cttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataag 10125756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 19177477 - 19177410
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | || ||||| |||||||||||| ||  | |||||| ||||||||||||||||||    
T  19177477 cttatatgaaaacagttagacttaattttatcttctgttgtagaaatagtttatacataagcacttat 19177410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 20982223 - 20982274
Alignment:
Q  426 ttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||| | | ||| | |||||||||||||||||||||||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttatacataagcacttat 20982274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 376
Target Start/End: Complemental strand, 35963312 - 35963273
Alignment:
Q  337 atgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  35963312 atgacatgtccataagttgttttcagcttatttccataag 35963273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 36539744 - 36539677
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| |  |||||||||||||||||| |  || | |||||||||| ||||||||||||||    
T  36539744 cttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcacttat 36539677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 375
Target Start/End: Original strand, 499714 - 499768
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    |||||||||||| || |||||| ||  | ||||||||||||||||||||||||||    
T  499714 cttatgaaaacagcttatgacatgttaacaagttgttttcagcttatttccataa 499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 477
Target Start/End: Original strand, 6738484 - 6738546
Alignment:
Q  415 atgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||| |||||||||||||||| |||| | |||   |||||||||||||||||| ||||||    
T  6738484 atgaaaagaatttgactttattttgtcttttattattgaaatagcttatacataagtacttat 6738546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 464
Target Start/End: Complemental strand, 11615506 - 11615452
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttata 464  Q
    |||||| | ||| ||||||||||||||||||||| | ||| ||||||||||||||    
T  11615506 cttatacgtaaacaatttgactttattttatcttttgttataaaaatagcttata 11615452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 473
Target Start/End: Complemental strand, 39128624 - 39128574
Alignment:
Q  423 aatttgactttattttatcttctcttacaaaaatagcttatacataagcac 473  Q
    ||||||||||||||||||||| | ||| | || ||||||||||||||||||    
T  39128624 aatttgactttattttatcttttgttatagaattagcttatacataagcac 39128574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Complemental strand, 1899235 - 1899178
Alignment:
Q  327 aaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccag 384  Q
    |||||| || |||||| ||  |||||||||||||||||||||||||||| || |||||    
T  1899235 aaaacagcttatgacatgtgcataagttgttttcagcttatttccataaattctccag 1899178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 5951949 - 5952006
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| || ||||| |||| | | | |||||||||||||||||||||||||||||    
T  5951949 agcttatggaagcaacttatgatagggctataagttgttttcagcttatttccataag 5952006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 8158373 - 8158406
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||||||||| |||||||||||||||    
T  8158373 cttatatgaaaataatttaactttattttatctt 8158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 477
Target Start/End: Complemental strand, 10391329 - 10391284
Alignment:
Q  432 ttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| | ||| ||||||||||||||| |||||||||||    
T  10391329 ttattttatcttttgttataaaaatagcttatacgtaagcacttat 10391284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 10907467 - 10907414
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttcca 372  Q
    ||||||||||||||||| ||| || ||| ||||| ||||||| |||||||||||    
T  10907467 agcttatgaaaacaacttatgtcatgtcaataagctgttttcggcttatttcca 10907414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 13604830 - 13604887
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||||||| || |||||| ||| ||| |||||||||| ||||||| ||||||    
T  13604830 agcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataag 13604887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 15074750 - 15074795
Alignment:
Q  339 gacacgtcgataagttgttttcagcttatttccataagttttccag 384  Q
    |||| ||| ||||| ||||||||||||||||||||||| |||||||    
T  15074750 gacatgtccataagctgttttcagcttatttccataagctttccag 15074795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 15985317 - 15985362
Alignment:
Q  419 aaataatttgactttattttatcttctcttacaaaaatagcttata 464  Q
    |||||||||||||| |||| ||||| ||||||||||||| ||||||    
T  15985317 aaataatttgacttaatttaatcttttcttacaaaaatatcttata 15985362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 32969189 - 32969222
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    ||||||| ||||||||||||||||||||||||||    
T  32969189 cttatataaaaataatttgactttattttatctt 32969222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 37526180 - 37526237
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||| |||||  |||||| ||  ||||| |||||||||||||||||||||||    
T  37526180 agcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataag 37526237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 37611196 - 37611253
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||  ||||| ||  ||||| ||||||||| |||||||||||||    
T  37611196 agcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataag 37611253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 37690617 - 37690674
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||| |||||  |||||| ||  ||||| |||||||||||||||||||||||    
T  37690617 agcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataag 37690674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 37787926 - 37787983
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||  ||||| ||  ||||| ||||||||| |||||||||||||    
T  37787926 agcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataag 37787983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 39750141 - 39750108
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||||| |||||||||||||||||||    
T  39750141 cttatatgaaaatagtttgactttattttatctt 39750108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 41957441 - 41957514
Alignment:
Q  259 aaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||||||| ||| ||||||||||  |||||||| |||||||||||||| | |  |  ||||||||||||||||    
T  41957441 aaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaaca 41957514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 454
Target Start/End: Original strand, 583845 - 583889
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaa 454  Q
    |||||||||||| | ||||||||||||||||||||| ||| ||||    
T  583845 cttatatgaaaacagtttgactttattttatcttctgttataaaa 583889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 5531123 - 5531056
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    ||||||||||||||||| |||| | ||| |||||||||||| | |||||||||| ||| | ||||||||    
T  5531123 agcttatgaaaacaacttatgatatgtccataagttgttttta-cttatttccagaagctctccaggat 5531056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 8177522 - 8177570
Alignment:
Q  259 aaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    ||||||||| ||||||||||||||  ||||||||  |||||||||||||    
T  8177522 aaacagcttatgatatgtccataagttgttttcaggttattttcataag 8177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 477
Target Start/End: Complemental strand, 11835268 - 11835208
Alignment:
Q  417 gaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||| ||||| ||||||||||||||| | ||| |||||| | |||||||||| |||||||    
T  11835268 gaaaacaatttaactttattttatcttttgttataaaaatggtttatacataaacacttat 11835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 475
Target Start/End: Complemental strand, 13224406 - 13224362
Alignment:
Q  431 tttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    ||||||||||||| | ||| | |||||||||||||||||||||||    
T  13224406 tttattttatcttttgttatagaaatagcttatacataagcactt 13224362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 14295595 - 14295527
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||||||||||| || |||| | ||||||||| ||||||||||||| ||| | ||| | ||||||||    
T  14295595 agcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggat 14295527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 15308987 - 15309059
Alignment:
Q  263 agcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||| |||||||| |||||  |||||||| |||||||||||||||| |  |  |||||| ||||||||||||    
T  15308987 agcttatgatatgttcataacctgttttcatcttattttcataagatctcaatgatagctaatgaaaacaact 15309059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 477
Target Start/End: Original strand, 16945076 - 16945120
Alignment:
Q  433 tattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||| ||||  | |||||||||||||||||||||||||    
T  16945076 tattttatcttttcttgtagaaatagcttatacataagcacttat 16945120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 477
Target Start/End: Complemental strand, 28776954 - 28776906
Alignment:
Q  429 actttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||| |   | |||||||||||||||||||||||||||    
T  28776954 actttattttatctttttcaataaaaatagcttatacataagcacttat 28776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 29925893 - 29925845
Alignment:
Q  287 ttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||||||||||||| | |  ||||||||||||| ||||||||    
T  29925893 ttttcaacttattttcataagttctccaatatagcttatgtaaacaact 29925845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 34690870 - 34690806
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||||| || | ||||||||||||||||| | ||| | ||||||| |||||||||| |||||    
T  34690870 tatatgaaagtattgtgactttattttatcttttgttatagaaatagcgtatacataaggactta 34690806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 478
Target Start/End: Original strand, 36796778 - 36796846
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    ||||| |||||||||||| || ||||||||| || | || || ||||| |||||||||| |||||||||    
T  36796778 cttatgtgaaaataatttaaccttattttattttttgttgcagaaataacttatacatatgcacttatt 36796846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 37794679 - 37794735
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    ||||||||||||||||| |||||| ||  ||||| |||||| |||||||||| ||||    
T  37794679 agcttatgaaaacaacttatgacatgttcataagctgttttgagcttatttcgataa 37794735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Original strand, 38104867 - 38104895
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  38104867 ataagttgttttcagcttatttccataag 38104895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 38766528 - 38766576
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttattt 369  Q
    |||||| |||||||| |||||||||| |||||||||||||  |||||||    
T  38766528 cttatggaaacaacttatgacacgtccataagttgttttcgacttattt 38766576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 477
Target Start/End: Original strand, 40048359 - 40048419
Alignment:
Q  417 gaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||| | ||||||||||||||| | ||| | ||| | |||||||||||||||||||    
T  40048359 gaaaataatataactttattttatcttttgttatagaaacaacttatacataagcacttat 40048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 41112830 - 41112858
Alignment:
Q  192 ttatttgagcttatctacttgcataaaca 220  Q
    |||||||||||||||||||||||||||||    
T  41112830 ttatttgagcttatctacttgcataaaca 41112858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 41957432 - 41957500
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||| | ||||| || |||||| ||| |||||||||||||| ||||||| |||||||| || |||||    
T  41957432 agcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggat 41957500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 871043 - 870976
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| || ||||||| |||||||||| | ||| |||||||| ||||||||||||||||||    
T  871043 cttatatgaaaaaaaattgacttaattttatcttttgttataaaaatagtttatacataagcacttat 870976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 17420201 - 17420134
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||  || |||||||||||||||| ||||| |||||||| ||||||||||| ||||||    
T  17420201 cttatatgaaaattgttcgactttattttatcttttcttataaaaatagtttatacataagtacttat 17420134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 45107620 - 45107554
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||| |||||||||||||||| || ||||| | |||||||||||| ||||||||||||    
T  45107620 cttatatgaaaatagtttgactttattttat-ttttcttatagaaatagcttatagataagcacttat 45107554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 477
Target Start/End: Original strand, 46499934 - 46499993
Alignment:
Q  418 aaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||| ||||||||||||||||||||| ||||| | |||||||||||| ||||||||||||    
T  46499934 aaaacaatttgactttattttatcttttcttatagaaatagcttatagataagcacttat 46499993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 289225 - 289171
Alignment:
Q  423 aatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||||||| |  |||||||||||||||||| |||||||||||    
T  289225 aatttgactttattttatcttttgctacaaaaatagcttatacttaagcacttat 289171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 414 - 476
Target Start/End: Complemental strand, 26184745 - 26184683
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||||||||||||||||| ||| ||||| | |||||| ||||||||||| |||||    
T  26184745 tatgaaaataatttgactttattttaccttttcttatagaaatagtttatacataagtactta 26184683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 35669058 - 35669005
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataa 306  Q
    |||||||| |||||| ||||||||||||||| |||||||||||||||| |||||    
T  35669058 ttatgaaagcagcttatgatatgtccataaattgttttcaacttatttccataa 35669005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 475
Target Start/End: Complemental strand, 1730881 - 1730825
Alignment:
Q  419 aaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    ||||| |||||||||||||||||||   ||| |||||||||||||||||||||||||    
T  1730881 aaatagtttgactttattttatctttggttaaaaaaatagcttatacataagcactt 1730825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 478
Target Start/End: Original strand, 6933037 - 6933101
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatt 478  Q
    |||||||| |||||||||||||||||| || | ||| |||||| |||||||||| ||||||||||    
T  6933037 tatgaaaacaatttgactttattttatgttttgttataaaaatggcttatacatgagcacttatt 6933101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 39270409 - 39270461
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcata 305  Q
    ||||||||||||||||||  ||||||||||  |||||||||||||||||||||    
T  39270409 ttatgaaaacagcttttggcatgtccataagctgttttcaacttattttcata 39270461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 4200227 - 4200161
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||||||| || |||||||||||||||||| | ||| ||||||| |||||| |||| ||||||    
T  4200227 cttatatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacactta 4200161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 473
Target Start/End: Original strand, 5941520 - 5941582
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcac 473  Q
    ||||||||||| | ||||||||||||||||| ||| |||  ||||||||||||| ||||||||    
T  5941520 ttatatgaaaacagtttgactttattttatcatctgttatcaaaatagcttatatataagcac 5941582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 12564498 - 12564544
Alignment:
Q  337 atgacacgtcgataagttgttttcagcttatttccataagttttcca 383  Q
    |||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  12564498 atgacaagtcaataagttgttttcagcttatttccataagttctcca 12564544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 381
Target Start/End: Complemental strand, 17420292 - 17420230
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttc 381  Q
    ||||||||||||||||| || ||| ||| |||| ||||||||| ||||||||||| |||||||    
T  17420292 agcttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttc 17420230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 26779941 - 26779991
Alignment:
Q  285 tgttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||||||||||||||| | || || |||||||||||||||||||    
T  26779941 tgttttcaacttattttcataagttcttcaagatagcttatgaaaacaact 26779991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 469
Target Start/End: Original strand, 28467379 - 28467440
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctct--tacaaaaatagcttatacataa 469  Q
    |||||||||||||||||||||||||||||||||| | |  |||| |||||| ||||||||||    
T  28467379 cttatatgaaaataatttgactttattttatcttttgttatacacaaataggttatacataa 28467440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 25719530 - 25719465
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||| ||||||||| ||||| | ||||| ||||||||||| |||| ||||||||    
T  25719530 tatatgaaaatagttttactttatttcatcttttattacagaaatagcttattcatacgcacttat 25719465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 31118130 - 31118073
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagtt 378  Q
    |||||||||||| || |||||| ||  || ||||||||||||||||||||||||||||    
T  31118130 cttatgaaaacatcttatgacatgttcatcagttgttttcagcttatttccataagtt 31118073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 477
Target Start/End: Complemental strand, 48282125 - 48282064
Alignment:
Q  417 gaaaataatttgactttattttatc-ttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||| ||||||||||||||||| |||| ||| | ||||||||| |||||||||||||||    
T  48282125 gaaaatagtttgactttattttatctttcttttatagaaatagcttttacataagcacttat 48282064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 471
Target Start/End: Complemental strand, 50998550 - 50998489
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagc 471  Q
    ||||||||||| || ||||| ||| ||||||||| | ||||| |||||||||||||||||||    
T  50998550 cttatatgaaagtagtttgattttgttttatcttttgttacagaaatagcttatacataagc 50998489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 4549310 - 4549262
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||| | |||||| ||| |||||||||||||||||||||||||||||    
T  4549310 aaacaatttatgacatgtctataagttgttttcagcttatttccataag 4549262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 15361711 - 15361644
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttc--tcttacaaaaatagcttatacataagcactt 475  Q
    ||||||||||||||||||||||||| |||||||||  | ||| | |||||| ||| ||||||||||||    
T  15361711 cttatatgaaaataatttgactttactttatcttctttgttatagaaatagtttacacataagcactt 15361644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 15579571 - 15579515
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataa 375  Q
    ||||| || |||||||| |||||| ||| |||||||||| |||||||||||||||||    
T  15579571 agcttgtggaaacaacttatgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 30815643 - 30815691
Alignment:
Q  259 aaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||||||||    
T  30815643 aaacagcttatgacatgttcataaaatgttttcagcttattttcataag 30815691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 49938799 - 49938751
Alignment:
Q  287 ttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||||||||||||| | | ||||||||||||| |||||||||    
T  49938799 ttttcaacttattttcataagttctctaatatagcttataaaaacaact 49938751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 50319286 - 50319230
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    |||||||| || |||||||||||||||||| | ||| | ||||||||||||||||||    
T  50319286 tatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataag 50319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 1232962 - 1233029
Alignment:
Q  408 atcttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||| ||||||||||| |||||||||||| || | ||| ||||| ||||||| ||||| |||||    
T  1232962 atcttatacgaaaataatttaactttattttatgttttgttataaaaacagcttatgcataaacactt 1233029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 477
Target Start/End: Original strand, 7274015 - 7274078
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||| ||||||||||||||| ||||| | ||| ||||||| | |||||||||||| ||||    
T  7274015 tatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacataagcatttat 7274078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 10199394 - 10199469
Alignment:
Q  255 atgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaa 330  Q
    ||||||| ||||| ||| |||| |||||  |||||||| |||||||||||||| | | ||| ||||||||||||||    
T  10199394 atgaaaatagcttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 476
Target Start/End: Complemental strand, 15489427 - 15489365
Alignment:
Q  413 atatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    ||||||||||| ||||||||||||| ||| | | | ||| ||||||||||||||||||||||||    
T  15489427 atatgaaaatagtttgactttattt-atcatttgtcacagaaatagcttatacataagcactta 15489365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 17269248 - 17269181
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||||||||||||||  ||| | ||  | ||||| |||||||||||||||||||    
T  17269248 cttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttat 17269181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 17420289 - 17420210
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagcttatgaaaaca 332  Q
    ||||||||||| ||| | | ||||||||||| |||||||||||||||| ||| || ||| | | |||||||| |||||||    
T  17420289 ttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttctgagatagcttacgaaaaca 17420210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 23544712 - 23544779
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| |||||||||| |||||||||| |   | | ||||||||||||||||||| |||||    
T  23544712 cttatatgaaaacaatttgacttaattttatctttttccatagaaatagcttatacataagcgcttat 23544779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 28689442 - 28689520
Alignment:
Q  259 aaacagcttttgatatgtccataaaatgttttcaacttattttcataagatttttaatatagct--tatgaaaacaact 335  Q
    ||||||||| ||| ||||||||||  |||||||| |||||||||||||| |||  || ||||||  |||||||||||||    
T  28689442 aaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaact 28689520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 383
Target Start/End: Original strand, 28689442 - 28689497
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataagttttcca 383  Q
    ||||| || |||||| ||| |||||||||||||||||||||| |||||| ||||||    
T  28689442 aaacagcttatgacatgtccataagttgttttcagcttattttcataagctttcca 28689497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 29723569 - 29723522
Alignment:
Q  259 aaacagcttttgatatgtccataaaatgttttcaacttattttcataa 306  Q
    ||||||||| ||| ||||||||||| |||||||||||||||| |||||    
T  29723569 aaacagcttatgacatgtccataaactgttttcaacttatttacataa 29723522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Original strand, 29793995 - 29794053
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    ||||| |||||| |||||||||| |||||||||| | ||||||||||||| |||||||||    
T  29793995 cttatttgaaaacaatttgactt-attttatcttttgttacaaaaatagcctatacataa 29794053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 29929602 - 29929653
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttc 370  Q
    ||||||||||||||||| |||||| ||  |||||||||||||||| ||||||    
T  29929602 agcttatgaaaacaactcatgacatgtgcataagttgttttcagcatatttc 29929653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 33108605 - 33108660
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||||||||||||| ||| || | | |||||||||||||| ||||||||||||||    
T  33108605 cttatgaaaacaactcatgccatgaccataagttgttttcaacttatttccataag 33108660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Original strand, 36151577 - 36151636
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||| ||||| ||||||||||||||||||||| | |||   |||||||||||||||||    
T  36151577 cttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 37811938 - 37811891
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattt 300  Q
    ||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  37811938 ttatgaaaacagcttatgacatgttcataaactgttttcaacttattt 37811891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 387
Target Start/End: Original strand, 39347977 - 39348016
Alignment:
Q  348 ataagttgttttcagcttatttccataagttttccaggat 387  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  39347977 ataagttgttttcagcttatttccataagctttgcaggat 39348016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 477
Target Start/End: Complemental strand, 42397741 - 42397694
Alignment:
Q  430 ctttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||| || | ||||| |||||||||||||||||||||||||    
T  42397741 ctttattttatgttttgttacagaaatagcttatacataagcacttat 42397694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 44032071 - 44032138
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||| ||||||||||||||||| ||| | ||| | |||  |||||||||||| |||||||    
T  44032071 cttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttat 44032138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 45999360 - 45999427
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||  | ||||||||||| ||||||| | ||| | ||||||||||||||| |||||||||    
T  45999360 cttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacatgagcacttat 45999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 11639400 - 11639454
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    ||||||||||||||| ||| ||||||||||  |||||| | ||||||||||||||    
T  11639400 ttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataag 11639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 374
Target Start/End: Original strand, 12477273 - 12477323
Alignment:
Q  324 atgaaaacaactgatgacacgtcgataagttgttttcagcttatttccata 374  Q
    |||||| || || |||||| ||| |||||||||||||||||||||||||||    
T  12477273 atgaaagcagcttatgacatgtccataagttgttttcagcttatttccata 12477323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 469
Target Start/End: Complemental strand, 21516370 - 21516312
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataa 469  Q
    |||||||||||  ||||||||| |||||||||| ||||| |||||||| ||||| ||||    
T  21516370 ttatatgaaaactatttgacttcattttatcttttcttataaaaatagtttataaataa 21516312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 24502818 - 24502868
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataagtt 378  Q
    |||||||| |||||| ||| |||| ||||||||||||||||||| ||||||    
T  24502818 aaacaacttatgacatgtcaataatttgttttcagcttatttccgtaagtt 24502868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 30371228 - 30371186
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttc 370  Q
    |||||||| |||||| ||| |||||||||||||||||||||||    
T  30371228 aaacaactaatgacatgtccataagttgttttcagcttatttc 30371186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 387
Target Start/End: Complemental strand, 37818498 - 37818460
Alignment:
Q  349 taagttgttttcagcttatttccataagttttccaggat 387  Q
    |||||||||||||||||||||||||||||| || |||||    
T  37818498 taagttgttttcagcttatttccataagttctctaggat 37818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 476
Target Start/End: Original strand, 38651485 - 38651547
Alignment:
Q  414 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactta 476  Q
    |||||||| |||| ||||||| |||||||| | ||| | || |||||||||||||||||||||    
T  38651485 tatgaaaacaattcgactttagtttatcttttgttatagaattagcttatacataagcactta 38651547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 472
Target Start/End: Original strand, 40304126 - 40304188
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagca 472  Q
    |||||||||||| ||| ||| ||||||||||||| | ||| | ||||||||||||| ||||||    
T  40304126 cttatatgaaaacaatgtgattttattttatcttttgttatataaatagcttatacctaagca 40304188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 429 - 471
Target Start/End: Original strand, 43722406 - 43722448
Alignment:
Q  429 actttattttatcttctcttacaaaaatagcttatacataagc 471  Q
    ||||||||||||||||| ||| | |||||||||||||||||||    
T  43722406 actttattttatcttctgttatataaatagcttatacataagc 43722448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 472
Target Start/End: Original strand, 45990130 - 45990192
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagca 472  Q
    |||||||||||| ||||| ||||||||||||||| |  || ||||||||| ||||||| ||||    
T  45990130 cttatatgaaaacaattttactttattttatcttttgatataaaaatagcatatacattagca 45990192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 378
Target Start/End: Original strand, 47885043 - 47885073
Alignment:
Q  348 ataagttgttttcagcttatttccataagtt 378  Q
    |||||||||||||||||||||||||||||||    
T  47885043 ataagttgttttcagcttatttccataagtt 47885073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 378
Target Start/End: Original strand, 6231795 - 6231856
Alignment:
Q  317 atagcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataagtt 378  Q
    |||||| ||| |||||||| |||||| ||| ||||  ||||||||||||||||| |||||||    
T  6231795 atagctcatggaaacaactaatgacatgtccataaactgttttcagcttatttctataagtt 6231856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 10439684 - 10439651
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    ||||||||||||||||||||||| ||||||||||    
T  10439684 cttatatgaaaataatttgacttcattttatctt 10439651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 11639397 - 11639454
Alignment:
Q  319 agcttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||||||||| || |||||| ||| ||||| |||||| ||||||||| ||||||    
T  11639397 agcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataag 11639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 11695946 - 11695893
Alignment:
Q  254 tatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    |||| |||||| || ||| ||||||||||  |||||||||||||||||||||||    
T  11695946 tatggaaacagtttatgacatgtccataagctgttttcaacttattttcataag 11695893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 15360892 - 15360827
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcactt 475  Q
    |||||||||||| | ||||||||||||||||||| | ||| | ||||| || |||||||| |||||    
T  15360892 cttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 27738252 - 27738285
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||| |||||||||||||||||||||    
T  27738252 cttatatgaaaacaatttgactttattttatctt 27738285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Complemental strand, 35017557 - 35017512
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataag 470  Q
    ||||||||||||||||||| | ||| ||||||||||||| ||||||    
T  35017557 tttgactttattttatcttgtattataaaaatagcttattcataag 35017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 35925776 - 35925723
Alignment:
Q  253 ttatgaaaacagcttttgatatgtccataaaatgttttcaacttattttcataa 306  Q
    ||||||||||||||| ||| |||| |||||  |||||||||||||||| |||||    
T  35925776 ttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataa 35925723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 471
Target Start/End: Original strand, 41516152 - 41516213
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagc 471  Q
    |||||||||||||| ||||||||| ||||||||| | | | ||| ||||||||| |||||||    
T  41516152 cttatatgaaaatagtttgactttcttttatcttttgtcaaaaacatagcttatgcataagc 41516213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 471
Target Start/End: Original strand, 43372031 - 43372092
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagc 471  Q
    ||||| |||||||||||||||| ||||||||||  | ||| | ||||||| |||||||||||    
T  43372031 cttatgtgaaaataatttgactctattttatctattgttatagaaatagcctatacataagc 43372092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 443
Target Start/End: Complemental strand, 45234191 - 45234162
Alignment:
Q  414 tatgaaaataatttgactttattttatctt 443  Q
    ||||||||||||||||||||||||||||||    
T  45234191 tatgaaaataatttgactttattttatctt 45234162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 48830148 - 48830181
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||||| |||||||||||||||||||    
T  48830148 cttatatgaaaatagtttgactttattttatctt 48830181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 4868480 - 4868432
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||| |||||| ||| |||||||||||||| ||||||| ||||||    
T  4868480 aaacaacttatgacatgtcaataagttgttttcaacttatttacataag 4868432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 21002136 - 21002084
Alignment:
Q  425 tttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||||||||||||||| || | |||| | || |||||||||||||||||||||    
T  21002136 tttgactttattttatattatgttaccagaacagcttatacataagcacttat 21002084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 27140558 - 27140510
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    ||||| || |||||| ||| |||||||||||||||||||||| ||||||    
T  27140558 aaacagcttatgacatgtccataagttgttttcagcttatttgcataag 27140510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 33975650 - 33975602
Alignment:
Q  259 aaacagcttttgatatgtccataaaatgttttcaacttattttcataag 307  Q
    |||| |||| ||||||||||||||| | |||||| ||||||||||||||    
T  33975650 aaaccgcttatgatatgtccataaactattttcagcttattttcataag 33975602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 474
Target Start/End: Complemental strand, 42336660 - 42336596
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcact 474  Q
    |||||||||||||   ||||||||||||||| || | ||| ||||||| | ||||||||||||||    
T  42336660 cttatatgaaaattgcttgactttattttattttttgttataaaaataacctatacataagcact 42336596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 442
Target Start/End: Original strand, 43371957 - 43371989
Alignment:
Q  410 cttatatgaaaataatttgactttattttatct 442  Q
    |||||||||||||||||| ||||||||||||||    
T  43371957 cttatatgaaaataattttactttattttatct 43371989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Original strand, 48748325 - 48748353
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  48748325 ataagttgttttcagcttatttccataag 48748353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 49517068 - 49517012
Alignment:
Q  410 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttataca 466  Q
    |||| ||||||| ||||||||||||||||||||| | ||| | ||||| ||||||||    
T  49517068 cttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 477
Target Start/End: Original strand, 34072 - 34136
Alignment:
Q  413 atatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||||||||||||||||||||| | ||| ||| | | |||||| ||||||| ||||    
T  34072 atatgaaaataatttgactttattttatcttttattataaatacaccttatatataagcagttat 34136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 12687 - 12742
Alignment:
Q  321 cttatgaaaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||| |||||||| |||||| ||| |||||||||||||||||||  ||||||||    
T  12687 cttatggaaacaacttatgacatgtccataagttgttttcagcttagctccataag 12742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 477
Target Start/End: Complemental strand, 20292 - 20226
Alignment:
Q  411 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||| |||||||| ||||||||| || | ||| | ||||| |||||||||| ||||||||    
T  20292 ttatatgaaaacaatttgacattattttatgttttattaaagaaataacttatacatacgcacttat 20226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 477
Target Start/End: Original strand, 63366 - 63424
Alignment:
Q  419 aaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    |||| ||||| |||||||||||||| | ||| |||||||||||||| | ||||||||||    
T  63366 aaatcatttgtctttattttatcttttgttataaaaatagcttataaacaagcacttat 63424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 440
Target Start/End: Original strand, 69015 - 69045
Alignment:
Q  410 cttatatgaaaataatttgactttattttat 440  Q
    |||||||||||||||||||||||||||||||    
T  69015 cttatatgaaaataatttgactttattttat 69045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Original strand, 1798 - 1863
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||| || ||||||||||||||| | ||| | || || |||||| ||||||||||||    
T  1798 tatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttat 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Original strand, 3888 - 3953
Alignment:
Q  412 tatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttat 477  Q
    ||||||||||||| || ||||||||||||||| | ||| | || || |||||| ||||||||||||    
T  3888 tatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttat 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 18439 - 18472
Alignment:
Q  410 cttatatgaaaataatttgactttattttatctt 443  Q
    |||||||||||| |||||||||||||||||||||    
T  18439 cttatatgaaaagaatttgactttattttatctt 18472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 6484 - 6532
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||  |||||| ||| ||||||||||||||| |||||||||||||    
T  6484 aaacaacctatgacatgtctataagttgttttcagtttatttccataag 6532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 13504 - 13552
Alignment:
Q  328 aaacaactgatgacacgtcgataagttgttttcagcttatttccataag 376  Q
    |||||||  |||||| ||| ||||||||||||||| |||||||||||||    
T  13504 aaacaacctatgacatgtctataagttgttttcagtttatttccataag 13552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Original strand, 33637 - 33665
Alignment:
Q  348 ataagttgttttcagcttatttccataag 376  Q
    |||||||||||||||||||||||||||||    
T  33637 ataagttgttttcagcttatttccataag 33665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 58794 - 58746
Alignment:
Q  287 ttttcaacttattttcataagatttttaatatagcttatgaaaacaact 335  Q
    ||||||||||| ||||||||| | || || |||||||||||||||||||    
T  58794 ttttcaacttaatttcataagttcttcaacatagcttatgaaaacaact 58746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University