View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20484_low_2 (Length: 633)

Name: NF20484_low_2
Description: NF20484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20484_low_2
NF20484_low_2
[»] chr6 (19 HSPs)
chr6 (285-479)||(32574449-32574644)
chr6 (13-193)||(32574678-32574858)
chr6 (498-614)||(32573262-32573378)
chr6 (198-267)||(32458037-32458104)
chr6 (423-471)||(20845012-20845060)
chr6 (423-477)||(19759786-19759840)
chr6 (423-471)||(548927-548975)
chr6 (330-422)||(11426013-11426104)
chr6 (423-471)||(15128211-15128259)
chr6 (210-274)||(20845402-20845465)
chr6 (425-477)||(32457644-32457696)
chr6 (217-274)||(31705575-31705631)
chr6 (217-274)||(31804603-31804659)
chr6 (424-477)||(33194603-33194656)
chr6 (217-273)||(5146337-5146392)
chr6 (217-273)||(12481034-12481089)
chr6 (344-396)||(15128118-15128170)
chr6 (217-273)||(15589780-15589835)
chr6 (425-477)||(16913326-16913378)
[»] chr4 (31 HSPs)
chr4 (423-477)||(41486573-41486627)
chr4 (423-477)||(28588559-28588613)
chr4 (217-275)||(6408833-6408890)
chr4 (217-268)||(7579448-7579501)
chr4 (217-267)||(34668582-34668631)
chr4 (217-274)||(46716563-46716619)
chr4 (217-274)||(56250559-56250616)
chr4 (425-477)||(3169038-3169090)
chr4 (345-422)||(12519725-12519804)
chr4 (217-273)||(20887412-20887467)
chr4 (330-422)||(32189052-32189143)
chr4 (200-267)||(4634679-4634745)
chr4 (200-267)||(9662249-9662315)
chr4 (423-477)||(9661851-9661905)
chr4 (200-274)||(14542164-14542237)
chr4 (423-477)||(16991870-16991924)
chr4 (423-477)||(23067910-23067964)
chr4 (217-259)||(29576790-29576831)
chr4 (217-263)||(30416296-30416341)
chr4 (423-477)||(34115714-34115768)
chr4 (217-267)||(44374944-44374993)
chr4 (424-477)||(4959638-4959691)
chr4 (217-274)||(37431566-37431622)
chr4 (210-267)||(41486970-41487026)
chr4 (217-273)||(393929-393984)
chr4 (425-477)||(1646005-1646057)
chr4 (217-273)||(18502497-18502552)
chr4 (217-273)||(19745801-19745856)
chr4 (217-273)||(19793950-19794005)
chr4 (217-273)||(24100544-24100599)
chr4 (207-267)||(53903975-53904034)
[»] chr3 (32 HSPs)
chr3 (330-422)||(43839468-43839563)
chr3 (334-422)||(32237951-32238041)
chr3 (200-274)||(45664610-45664684)
chr3 (423-477)||(41882470-41882524)
chr3 (425-477)||(20201122-20201174)
chr3 (425-477)||(20203304-20203356)
chr3 (423-470)||(1220277-1220324)
chr3 (425-471)||(21803534-21803580)
chr3 (423-477)||(35501821-35501875)
chr3 (423-477)||(40462057-40462111)
chr3 (423-477)||(50519788-50519842)
chr3 (217-274)||(25111832-25111888)
chr3 (210-274)||(3961438-3961501)
chr3 (217-273)||(45047908-45047963)
chr3 (430-477)||(22286818-22286865)
chr3 (330-422)||(40365295-40365389)
chr3 (217-276)||(42167724-42167782)
chr3 (217-268)||(48652112-48652162)
chr3 (330-422)||(54240155-54240249)
chr3 (423-477)||(1165458-1165512)
chr3 (217-275)||(43839186-43839243)
chr3 (200-273)||(1074540-1074612)
chr3 (424-477)||(1806523-1806576)
chr3 (207-274)||(7869101-7869172)
chr3 (210-263)||(27831498-27831550)
chr3 (210-267)||(43030079-43030135)
chr3 (217-274)||(48401502-48401558)
chr3 (217-274)||(53155093-53155149)
chr3 (217-273)||(33637805-33637860)
chr3 (217-273)||(36623926-36623981)
chr3 (217-273)||(49627767-49627822)
chr3 (425-477)||(53426802-53426854)
[»] chr8 (33 HSPs)
chr8 (217-276)||(7281960-7282018)
chr8 (201-267)||(5328343-5328408)
chr8 (423-477)||(9992663-9992717)
chr8 (217-274)||(5457460-5457516)
chr8 (423-470)||(9270026-9270073)
chr8 (217-276)||(13570430-13570488)
chr8 (423-477)||(8054870-8054924)
chr8 (330-396)||(32412887-32412953)
chr8 (424-477)||(7269527-7269580)
chr8 (217-274)||(38545479-38545535)
chr8 (217-276)||(39067353-39067411)
chr8 (200-267)||(44295712-44295778)
chr8 (423-477)||(16937401-16937455)
chr8 (218-276)||(26673446-26673503)
chr8 (431-477)||(31874082-31874128)
chr8 (210-272)||(31874455-31874516)
chr8 (217-267)||(41996939-41996988)
chr8 (217-263)||(45310899-45310944)
chr8 (201-275)||(589001-589076)
chr8 (201-275)||(624846-624921)
chr8 (217-274)||(2234133-2234189)
chr8 (217-274)||(8054477-8054533)
chr8 (210-267)||(9993062-9993118)
chr8 (222-259)||(16644734-16644771)
chr8 (364-422)||(31147786-31147846)
chr8 (210-267)||(32413186-32413242)
chr8 (217-274)||(37613046-37613102)
chr8 (221-273)||(7579522-7579573)
chr8 (217-273)||(26912038-26912093)
chr8 (217-273)||(28296778-28296833)
chr8 (217-273)||(31202859-31202914)
chr8 (217-265)||(31712743-31712790)
chr8 (423-471)||(36545843-36545891)
[»] chr2 (28 HSPs)
chr2 (217-276)||(36868416-36868474)
chr2 (330-422)||(5930492-5930586)
chr2 (423-477)||(7640418-7640472)
chr2 (217-267)||(11931268-11931317)
chr2 (354-423)||(41842018-41842087)
chr2 (219-266)||(23256302-23256348)
chr2 (217-263)||(7581762-7581807)
chr2 (281-319)||(17056258-17056296)
chr2 (281-319)||(17068705-17068743)
chr2 (281-319)||(17074702-17074740)
chr2 (281-319)||(17095275-17095313)
chr2 (423-477)||(27191397-27191451)
chr2 (423-477)||(27841211-27841265)
chr2 (214-260)||(28413424-28413469)
chr2 (423-477)||(42105814-42105868)
chr2 (210-267)||(3390819-3390875)
chr2 (210-267)||(9207018-9207074)
chr2 (217-274)||(9689640-9689696)
chr2 (217-274)||(13113421-13113477)
chr2 (217-274)||(15920263-15920319)
chr2 (217-274)||(19904899-19904955)
chr2 (217-274)||(25622713-25622769)
chr2 (210-267)||(25771841-25771897)
chr2 (430-471)||(44167778-44167819)
chr2 (217-265)||(4878403-4878450)
chr2 (423-471)||(6089897-6089945)
chr2 (330-422)||(6089962-6090053)
chr2 (217-273)||(16136489-16136544)
[»] chr7 (27 HSPs)
chr7 (423-477)||(25855282-25855336)
chr7 (217-274)||(23732063-23732119)
chr7 (217-274)||(26017327-26017383)
chr7 (200-275)||(134797-134871)
chr7 (200-273)||(10574776-10574848)
chr7 (217-274)||(37399987-37400043)
chr7 (237-274)||(40016568-40016605)
chr7 (217-273)||(43847384-43847439)
chr7 (217-273)||(44482533-44482588)
chr7 (423-471)||(47749738-47749786)
chr7 (199-265)||(8319713-8319779)
chr7 (217-275)||(7986280-7986337)
chr7 (423-469)||(24470401-24470447)
chr7 (423-469)||(24475349-24475395)
chr7 (439-477)||(28015354-28015392)
chr7 (217-267)||(30992493-30992542)
chr7 (431-477)||(40775265-40775311)
chr7 (217-267)||(43806819-43806868)
chr7 (210-274)||(47750123-47750190)
chr7 (345-422)||(135111-135190)
chr7 (217-273)||(2623003-2623058)
chr7 (221-273)||(17508863-17508914)
chr7 (221-273)||(17544300-17544351)
chr7 (217-273)||(24319878-24319933)
chr7 (441-477)||(38649438-38649474)
chr7 (217-273)||(46025710-46025765)
chr7 (217-273)||(48304047-48304102)
[»] chr5 (20 HSPs)
chr5 (199-267)||(6886829-6886896)
chr5 (426-471)||(34893981-34894026)
chr5 (217-276)||(9196686-9196744)
chr5 (423-466)||(15710551-15710594)
chr5 (423-470)||(41988189-41988236)
chr5 (217-267)||(5378698-5378747)
chr5 (439-477)||(29310427-29310465)
chr5 (439-477)||(31645827-31645865)
chr5 (217-267)||(39308422-39308471)
chr5 (210-274)||(6281454-6281518)
chr5 (217-274)||(11734500-11734556)
chr5 (217-274)||(17218112-17218168)
chr5 (210-267)||(31646225-31646281)
chr5 (217-274)||(32309906-32309962)
chr5 (217-274)||(41358423-41358479)
chr5 (219-276)||(43415613-43415669)
chr5 (423-471)||(19646103-19646151)
chr5 (423-471)||(28618608-28618656)
chr5 (217-273)||(39179500-39179555)
chr5 (426-477)||(41358036-41358088)
[»] scaffold0090 (1 HSPs)
scaffold0090 (217-276)||(11223-11281)
[»] chr1 (23 HSPs)
chr1 (217-276)||(17347983-17348041)
chr1 (217-276)||(43504205-43504263)
chr1 (213-267)||(23257484-23257537)
chr1 (423-477)||(44562811-44562865)
chr1 (203-267)||(15276101-15276164)
chr1 (199-274)||(13999352-13999425)
chr1 (200-274)||(51418394-51418468)
chr1 (423-477)||(5832231-5832285)
chr1 (212-274)||(6212578-6212639)
chr1 (334-396)||(44562704-44562766)
chr1 (217-267)||(49652231-49652280)
chr1 (201-274)||(900440-900512)
chr1 (423-468)||(8893300-8893345)
chr1 (423-476)||(17579767-17579820)
chr1 (217-274)||(26771495-26771551)
chr1 (210-267)||(38644459-38644515)
chr1 (423-460)||(40992349-40992386)
chr1 (226-274)||(423956-424003)
chr1 (217-265)||(12967402-12967449)
chr1 (429-477)||(13691826-13691874)
chr1 (423-467)||(23320448-23320492)
chr1 (199-274)||(25032739-25032814)
chr1 (423-467)||(52752036-52752080)
[»] scaffold0157 (1 HSPs)
scaffold0157 (345-422)||(1107-1186)
[»] scaffold0536 (1 HSPs)
scaffold0536 (217-276)||(3303-3361)
[»] scaffold0722 (1 HSPs)
scaffold0722 (217-275)||(5195-5252)
[»] scaffold0321 (1 HSPs)
scaffold0321 (220-274)||(6787-6841)
[»] scaffold0045 (1 HSPs)
scaffold0045 (423-477)||(9710-9764)
[»] scaffold0432 (1 HSPs)
scaffold0432 (217-274)||(2103-2159)
[»] scaffold0312 (1 HSPs)
scaffold0312 (226-274)||(6546-6593)
[»] scaffold0024 (1 HSPs)
scaffold0024 (345-422)||(36598-36677)


Alignment Details
Target: chr6 (Bit Score: 136; Significance: 1e-70; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 285 - 479
Target Start/End: Complemental strand, 32574644 - 32574449
Alignment:
Q  285 aaagtgcaaaagtctacacatatgacaatattcaaatacatgaacaaaaacaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatg 384  Q
    ||||||||| || |||| |||| ||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||||||||||| |    
T  32574644 aaagtgcaacagcctacgcatacgacaatattcaaatacatgaacaaaaacaaaaaacgccgcacaaatacgatgaacaaaccaacatcgcattaagacg 32574545  T
Q  385 acgaaatcacaa-taaaaagtgaaatagatttgaaaatcgggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaaac 479  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  32574544 acgaaatcaaaaataaaaagtgaaatagatttaaaaatcgggaaagagaaaagcgagttagagggttaattttgggtcaaaaattgactctaaaac 32574449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 32574858 - 32574678
Alignment:
Q  13 gatgaagcaagagaaatgacgaattagcgagatcgagatcgagaactctgagagatagtgttacacgaaatattttcacattgatgagttgtcttgattg 112  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  32574858 gatgaagcaagagaaatgacgaatgagcgagatcgagatcgagaactctgggagatggtgttacacaaaatattttcacattgatgagttgtcttgattg 32574759  T
Q  113 nnnnnnnttaaattaaaatagtccttaaagggtagaactagataattattgacaaatgctaacaagtgttgttgcgtttta 193  Q
           ||||||||||||||||||||||  |||||||| ||||||| |||| ||||| ||||||||||||| ||||||||    
T  32574758 aaaaaaattaaattaaaatagtccttaaactgtagaacttgataattcttgagaaatgataacaagtgttgtcgcgtttta 32574678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 498 - 614
Target Start/End: Complemental strand, 32573378 - 32573262
Alignment:
Q  498 gaccatgctatttaacatgtatgttgggcttgttggggtaatagtagtggcttggccttgggtgtggaggtaacctttgcgggtggggagtagcatgggt 597  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32573378 gaccatgctatttaacatgtatgttgggcttgttggggtaatagtagtggcttggccttgggtgtgggggtaacctttgcgggtggggagtagcatgggt 32573279  T
Q  598 gtcggtcttgttgttat 614  Q
    || ||||||||||||||    
T  32573278 gttggtcttgttgttat 32573262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 32458104 - 32458037
Alignment:
Q  198 aattttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||||||  |||||||||||    
T  32458104 aattttttatt-ttttgacaaaataaatcatattcattca-tttaaattgataaagtgcatcgatataat 32458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 20845060 - 20845012
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  20845060 gggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgac 20845012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 19759840 - 19759786
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  19759840 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaa 19759786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 548927 - 548975
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    |||||| |||||| |||||||||||||| ||||||| ||||||||||||    
T  548927 gggaaaaagaaaaacgagttagaggggtgattttgggtcaaaaattgac 548975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 11426104 - 11426013
Alignment:
Q  330 aaaaacaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcacaataaaaagtgaaatagatttgaaaatc 422  Q
    ||||||||||||   ||||| || |||| |||||| |||||||||||  |||||||||||||||||| | |||  ||||||||| ||||||||    
T  11426104 aaaaacaaacaacgtcgcacaaagacgacgaacaa-ccaacatcgcacgaagatgacgaaatcacaaaataaaacgaaatagatgtgaaaatc 11426013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 15128211 - 15128259
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    ||||||||||||| |||||||||||||| |||||||  |||||||||||    
T  15128211 gggaaagagaaaaacgagttagaggggtgattttgggacaaaaattgac 15128259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 20845465 - 20845402
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||| |||||    
T  20845465 ttttgacaaaataaaagatattcattca-ttcaaattgatatagtacatcgatataatacaaatt 20845402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 32457696 - 32457644
Alignment:
Q  425 gaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||| ||||||||| |||| ||||||| |||||||||||| |||||    
T  32457696 gaaagagaaaaacgagttagatgggtgattttgggtcaaaaattgacgctaaa 32457644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 31705631 - 31705575
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| ||||||||||||||| ||||||||| |||| ||||||| |||| |||||    
T  31705631 aaaataaacgatattcattcattt-aaattgatagagtacatcgatacaatacaaatt 31705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 31804659 - 31804603
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| |||||| |||||||| ||||||||| |||| |||||||||||| |||||    
T  31804659 aaaataaacgatatttattcattt-aaattgatagagtacatcgatataataaaaatt 31804603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 477
Target Start/End: Complemental strand, 33194656 - 33194603
Alignment:
Q  424 ggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||||||||| ||| ||||||  || |||||||||||||||||||| |||||    
T  33194656 ggaaagagaaaaacgaattagagatgtgattttggatcaaaaattgaccctaaa 33194603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 5146392 - 5146337
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  ||||||||| |||| |||||||||||| ||||    
T  5146392 aaaataaacgatattcattcattc-aaattgatagagtacatcgatataatacaaat 5146337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 12481034 - 12481089
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||| |||| ||||    
T  12481034 aaaataaacgatattcattcattc-aaattgataaagtacatcgatacaatacaaat 12481089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 15128118 - 15128170
Alignment:
Q  344 ccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcacaa 396  Q
    |||||| || |||| |||||||||||| ||||| ||||| |||||||||||||    
T  15128118 ccgcacaaagacgacgaacaaaccaacgtcgcactaagacgacgaaatcacaa 15128170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 15589780 - 15589835
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| |||||||||||| || ||||||||| |||| ||||||| |||||||||    
T  15589780 aaaataaacgatattcattca-ttcaaattgatagagtacatcgatacaatataaat 15589835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 16913378 - 16913326
Alignment:
Q  425 gaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||| ||||| |||||||||||||| |||| || |||||||||||| |||||    
T  16913378 gaaagtgaaaaacgagttagaggggtgatttcgggtcaaaaattgaccctaaa 16913326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 41486627 - 41486573
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||    
T  41486627 gggaaagagaaaaacgagttagaggggtgattttggatcaaaaattgaccctaaa 41486573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 28588613 - 28588559
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  28588613 gggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaa 28588559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 6408890 - 6408833
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattt 275  Q
    ||||||||||||||||||||| |||||||||| |||||| || ||||||||| ||||||    
T  6408890 aaaataaatgatattcattca-tttaaattgacaaagtacattgatataataaaaattt 6408833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 7579448 - 7579501
Alignment:
Q  217 aaaataaatgatattcattcatt--ttaaattgataaagtatatcgatataata 268  Q
    |||||||||||||||||||||||  || ||||||||||||| ||||||||||||    
T  7579448 aaaataaatgatattcattcattcattcaattgataaagtacatcgatataata 7579501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 34668631 - 34668582
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  34668631 aaaataaatgatatttattcattt-aaattgataaagtacatcgatataat 34668582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 46716563 - 46716619
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||||||||||||| || ||||||||| |||| ||||||||||| ||||||    
T  46716563 aaaataaatgatattcattca-ttcaaattgatatagtacatcgatataatgtaaatt 46716619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 56250616 - 56250559
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||  ||||||||| |||| |||||||||||||| |||||||||||| |||||    
T  56250616 aaaataaacaatattcatttatttaaaattgataaagtacatcgatataatacaaatt 56250559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 3169090 - 3169038
Alignment:
Q  425 gaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||| |||||||||||||| ||||||| |||| |||||||||||||    
T  3169090 gaaagaaaaaaacgagttagaggggtgattttgggtcaataattgactctaaa 3169038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 12519804 - 12519725
Alignment:
Q  345 cgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    ||||| ||||||| |||||||||||| ||||| ||||| |||||||||||  ||||||||   |||||||| ||||||||    
T  12519804 cgcacaaatacgacgaacaaaccaacgtcgcactaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatc 12519725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 20887412 - 20887467
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  20887412 aaaataaacgatattcattcattt-aaattgatagagtacatcgatacaatataaat 20887467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 32189143 - 32189052
Alignment:
Q  330 aaaaacaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcacaataaaaagtgaaatagatttgaaaatc 422  Q
    ||||||||||||   ||||| || |||| |||||||||||| |||||  |||| ||||||||||||| |||||  ||||||||| ||||||||    
T  32189143 aaaaacaaacaacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaa-aaaaaacgaaatagatgtgaaaatc 32189052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 4634745 - 4634679
Alignment:
Q  200 ttttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| || |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  4634745 ttttttttttttttgacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataat 4634679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 9662315 - 9662249
Alignment:
Q  200 ttttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| || |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  9662315 ttttttttttttttgacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataat 9662249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 9661905 - 9661851
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| | |||||||||||| ||||||| |||||||||||| |||||    
T  9661905 gggaaaaagaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaa 9661851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 14542164 - 14542237
Alignment:
Q  200 ttttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||| || |||||| |||||||| |||||||||||| || ||||||||| | || ||||||||||| ||||||    
T  14542164 ttttttttttttttgacaaaataaaagatattcattca-ttcaaattgatagaatacatcgatataatgtaaatt 14542237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 16991924 - 16991870
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| ||||||||| |||| ||||||| |||||||||||| |||||    
T  16991924 gggaaatagaaaaacgagttagatgggtgattttgggtcaaaaattgaccctaaa 16991870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 23067910 - 23067964
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||||| |||| || |||||||||||| |||||    
T  23067910 gggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaa 23067964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 29576790 - 29576831
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatc 259  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  29576790 aaaataaatgatattcattca-ttcaaattgataaagtatatc 29576831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 30416296 - 30416341
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgata 263  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||||    
T  30416296 aaaataaatgatattcattca-tttaaattgatagagtacatcgata 30416341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 34115714 - 34115768
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||||| |||  ||||||||| ||||||| |||||||||||| |||||    
T  34115714 gggaaagagaaaaacgaactagaggggtgattttgggtcaaaaattgaccctaaa 34115768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 44374944 - 44374993
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||||||    
T  44374944 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatataat 44374993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 4959638 - 4959691
Alignment:
Q  424 ggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||||  ||||||||| | | |||||||||||||||||||| |||||    
T  4959638 ggaaagagaaaaatgagttagagtgatgattttggatcaaaaattgaccctaaa 4959691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 37431622 - 37431566
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| ||||||| ||| ||||||||||||| |||||||||||| |||| |||||    
T  37431622 aaaataaacgatattctttc-ttttaaattgatagagtatatcgatacaatacaaatt 37431566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 41487026 - 41486970
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||| |||||||||||| || ||||||||| |||| ||||| |||||    
T  41487026 ttttgataaaataaaagatattcattca-ttcaaattgatagagtacatcgaaataat 41486970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 393929 - 393984
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||| |||| ||||    
T  393929 aaaataaacgatattcattcattc-aaattgataaagtacatcgatacaatacaaat 393984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 1646005 - 1646057
Alignment:
Q  425 gaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||| |||||||||||||| ||||||| |||| |||| || |||||    
T  1646005 gaaagagaaaaacgagttagaggggtgattttgggtcaacaattaaccctaaa 1646057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 18502497 - 18502552
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| |||||||||||| |||||||||||| |||| ||||||| |||| ||||    
T  18502497 aaaataaacgatattcattca-tttaaattgatagagtacatcgatacaatacaaat 18502552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 19745856 - 19745801
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| |||||||| |||||| ||||||||| |||||||||||| |||| ||||    
T  19745856 aaaataaacgatattcaatcattt-aaattgatagagtatatcgatacaatacaaat 19745801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 19793950 - 19794005
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| |||||||| |||||| ||||||||| |||||||||||| |||| ||||    
T  19793950 aaaataaacgatattcaatcattt-aaattgatagagtatatcgatacaatacaaat 19794005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 24100599 - 24100544
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    ||||||||||||||||||||| || ||||||||| |||| ||||||| |||| ||||    
T  24100599 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatacaatacaaat 24100544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 53904034 - 53903975
Alignment:
Q  207 ttcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||| |||||||| |||||||||||| || ||||||| | |||| |||||||||||    
T  53904034 ttcttttgacaaaataaaagatattcattca-ttcaaattgaaagagtacatcgatataat 53903975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 43839468 - 43839563
Alignment:
Q  330 aaaaacaaacaataccgcacgaa-tacgatgaacaaaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    |||||||||||||  ||||| || ||||| ||||||||||||||||||  ||||||||||||||||  ||||||||  ||||||||| ||||||||    
T  43839468 aaaaacaaacaatgtcgcacaaaatacgacgaacaaaccaacatcgcacgaagatgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatc 43839563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 422
Target Start/End: Original strand, 32237951 - 32238041
Alignment:
Q  334 acaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    ||||||||  |||||| || |||| ||||||||||||||||||  |||||||| |||||||  |||||||| |||||||||| ||||||||    
T  32237951 acaaacaacgccgcacaaagacgacgaacaaaccaacatcgcacaaagatgacaaaatcacaaaataaaaaatgaaatagatatgaaaatc 32238041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 45664684 - 45664610
Alignment:
Q  200 ttttttattcttttgataaaa-taaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||| || ||||||||||| |||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||    
T  45664684 ttttttttttttttgataaaaataaatgatattcattcattt-aaattgatagagtacatcgatataatgtaaatt 45664610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 41882470 - 41882524
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||||||||||||| |||||||||||| |||||    
T  41882470 gggaaatagaaaaacgagttagaggggtaattttgggtcaaaaattgaccctaaa 41882524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 20201122 - 20201174
Alignment:
Q  425 gaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  20201122 gaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaa 20201174  T

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Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 20203304 - 20203356
Alignment:
Q  425 gaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  20203304 gaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaa 20203356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 1220277 - 1220324
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattga 470  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  1220277 gggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattga 1220324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 471
Target Start/End: Complemental strand, 21803580 - 21803534
Alignment:
Q  425 gaaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  21803580 gaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgac 21803534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 35501821 - 35501875
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||| || |||||    
T  35501821 gggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattaaccctaaa 35501875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 40462057 - 40462111
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||||| | |||||||||||| ||||||| |||||| |||||||||||    
T  40462057 gggaaagagaaaaacaagttagaggggtgattttgggtcaaaatttgactctaaa 40462111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 50519842 - 50519788
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  50519842 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaa 50519788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 25111832 - 25111888
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||||||||||||| || ||||| ||| |||| ||||||||||||||||||    
T  25111832 aaaataaatgatattcattca-ttcaaattaatagagtacatcgatataatataaatt 25111888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 3961438 - 3961501
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||| |||||||||| |||||||||| |||  |||||||||||||||||||||| |||| |||||    
T  3961438 tttttataaaataaacgatattcatttattc-aaattgataaagtatatcgatacaatacaaatt 3961501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 45047963 - 45047908
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||| |||| ||||    
T  45047963 aaaataaatgatattcattca-ttcaaattgatagagtatatcgatacaatacaaat 45047908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 477
Target Start/End: Original strand, 22286818 - 22286865
Alignment:
Q  430 agaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||||||||||||||||| | |||||||||||| |||||    
T  22286818 agaaaaacgagttagaggggtaattttaggtcaaaaattgaccctaaa 22286865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 40365389 - 40365295
Alignment:
Q  330 aaaaacaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    ||||||||||||  ||| || || ||||  ||||||||||| ||||||||||||||| |||||||  ||||||||   |||||||| ||||||||    
T  40365389 aaaaacaaacaacgccgtacaaagacgacaaacaaaccaacgtcgcattaagatgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatc 40365295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 42167724 - 42167782
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    ||||||||||||||||||||| || ||||||| | || ||||||||| ||||||||||||    
T  42167724 aaaataaatgatattcattca-ttcaaattgacagagaatatcgatacaatataaattta 42167782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 48652112 - 48652162
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataata 268  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||| ||||    
T  48652112 aaaataaatgatattcattca-ttcaaattgataaagtacatcgatacaata 48652162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 54240249 - 54240155
Alignment:
Q  330 aaaaacaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    |||||||||||| | ||||| || |||  |||||||||||| |||||  |||| |||||||||||  ||||||||  ||||||||| ||||||||    
T  54240249 aaaaacaaacaacatcgcacaaagacgtcgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatc 54240155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 1165458 - 1165512
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| | |||||||||||| ||||||| |||||||||||| |||||    
T  1165458 gggaaaaagaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaa 1165512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 43839186 - 43839243
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattt 275  Q
    |||||| ||||||||||||||||  ||||||||| |||| ||||||||||| |||||||    
T  43839186 aaaatagatgatattcattcattc-aaattgatagagtacatcgatataatgtaaattt 43839243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 1074540 - 1074612
Alignment:
Q  200 ttttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||| || |||| | |||||||| |||||||||||| || ||||||||| |||| |||||||||||| ||||    
T  1074540 ttttttcttttttttacaaaataaacgatattcattca-ttcaaattgatagagtacatcgatataatacaaat 1074612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 1806523 - 1806576
Alignment:
Q  424 ggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||| ||||||| ||| |||||||||| |||| ||||||||||||||| |||||    
T  1806523 ggaaggagaaaaacgatttagaggggtgatttgggatcaaaaattgaccctaaa 1806576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 7869101 - 7869172
Alignment:
Q  207 ttcttttgataaaa-taaatgatattcattcatt---ttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||| |||| ||||||||||| |||||||   | ||||||||| |||||||||||| ||||||||||    
T  7869101 ttcttttgacaaaactaaatgatattgattcattcattcaaattgatagagtatatcgataaaatataaatt 7869172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 27831550 - 27831498
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgata 263  Q
    |||||| ||||||||||||||| ||||| |||||||||||| |||| |||||||    
T  27831550 ttttgacaaaataaatgatatttattca-tttaaattgatagagtacatcgata 27831498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 43030135 - 43030079
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  43030135 ttttgacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataat 43030079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 48401558 - 48401502
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| |||||||||||| || ||||||||| |||| ||||||| ||||||||||    
T  48401558 aaaataaacgatattcattca-ttcaaattgatagagtacatcgatacaatataaatt 48401502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 53155093 - 53155149
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| |||||||||||| |||||||||||| |||| ||||||| |||| |||||    
T  53155093 aaaataaacgatattcattca-tttaaattgatagagtacatcgatacaatacaaatt 53155149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 33637860 - 33637805
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||| |||| ||||    
T  33637860 aaaataaacgatattcattcattc-aaattgataaagtacatcgatacaatacaaat 33637805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 36623926 - 36623981
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    ||||||||||||||||||||| || ||||||||| |||| |||| || |||||||||    
T  36623926 aaaataaatgatattcattca-ttcaaattgatagagtacatcggtacaatataaat 36623981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 49627767 - 49627822
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| |||||||||||| || ||||||||| |||| ||||||| |||||||||    
T  49627767 aaaataaacgatattcattca-ttcaaattgatagagtacatcgatacaatataaat 49627822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 53426854 - 53426802
Alignment:
Q  425 gaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||| |||||||||||||| ||||||  | |||||||||| |||||    
T  53426854 gaaagagaaaaacgagttagaggggtgattttgcgtaaaaaattgaccctaaa 53426802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 7282018 - 7281960
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    |||||||| |||||||||||||||||| || ||| |||||||||||||||||||||||||    
T  7282018 aaaataaacgatattcattcattttaattt-atagagtatatcgatataatataaattta 7281960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 5328408 - 5328343
Alignment:
Q  201 tttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||| || |||||| |||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  5328408 tttttttttttttgacaaaataaatgatattcattc-ttttaaattgatagagtacatcgatataat 5328343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 9992717 - 9992663
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  9992717 gggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaa 9992663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 5457516 - 5457460
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||||    
T  5457516 aaaataaatgatattcattcattc-aaattgatagagtacatcgatataatataaatt 5457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 9270073 - 9270026
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattga 470  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  9270073 gggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattga 9270026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 13570430 - 13570488
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||| |||| |||||||    
T  13570430 aaaataaacgatattcattcattt-aaattgatagagtatatcgatacaatacaaattta 13570488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 8054870 - 8054924
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||| ||||||||| |||||||||||| |||||    
T  8054870 gggaaatagaaaaacgagttagagggataattttgggtcaaaaattgaccctaaa 8054924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 32412953 - 32412887
Alignment:
Q  330 aaaaacaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcacaa 396  Q
    |||||||||||| | ||||| || ||||||||||||||||| |||||  |||| |||||||||||||    
T  32412953 aaaaacaaacaacatcgcacaaagacgatgaacaaaccaacgtcgcacgaagacgacgaaatcacaa 32412887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 7269527 - 7269580
Alignment:
Q  424 ggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||| |||||||||||||| |||| |||| || ||||||||||||||||||    
T  7269527 ggaaagaaaaaagcgagttagaagggtgatttagggtcaaaaattgactctaaa 7269580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 38545479 - 38545535
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| ||||||||||||||  ||||||||| |||||||||||| ||||||||||    
T  38545479 aaaataaacgatattcattcattc-aaattgatagagtatatcgatacaatataaatt 38545535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 39067353 - 39067411
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||  ||| |||||||    
T  39067353 aaaataaacgatattcattc-ttttaaattgatagagtatatcgatactatacaaattta 39067411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 44295778 - 44295712
Alignment:
Q  200 ttttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| || |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  44295778 ttttttttttttttgacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataat 44295712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 16937401 - 16937455
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| | |||||||||| | |||||||||||||||||||| |||||    
T  16937401 gggaaatagaaaaacaagttagagggatgattttggatcaaaaattgaccctaaa 16937455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 26673446 - 26673503
Alignment:
Q  218 aaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||  ||| |||||||    
T  26673446 aaataaatgatatccattcattt-aaattgatagagtatatcgatacgatacaaattta 26673503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 431 - 477
Target Start/End: Complemental strand, 31874128 - 31874082
Alignment:
Q  431 gaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  31874128 gaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaa 31874082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 31874516 - 31874455
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaa 272  Q
    |||||| |||||||| |||||||||||| || ||||||||| |||| ||||||||||| ||||    
T  31874516 ttttgacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataatgtaaa 31874455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 41996988 - 41996939
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||||||||| |||||||||||  |||| |||||||||||    
T  41996988 aaaataaatgatattcattca-tttaaattgatcgagtacatcgatataat 41996939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 45310899 - 45310944
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgata 263  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||    
T  45310899 aaaataaatgatattaattcattc-aaattgataaagtatatcgata 45310944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 275
Target Start/End: Original strand, 589001 - 589076
Alignment:
Q  201 tttttattcttttgataaaataaatgatat--tcattcattttaaattgataaagtatatcgatataatataaattt 275  Q
    ||||| ||||||||| |||||||| |||||  |||||||||  ||||||||||| || |||||||||||| ||||||    
T  589001 ttttttttcttttgacaaaataaacgatatattcattcattc-aaattgataaaatacatcgatataatacaaattt 589076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 624921 - 624846
Alignment:
Q  201 tttttattcttttgataaaataaatgatat--tcattcattttaaattgataaagtatatcgatataatataaattt 275  Q
    ||||| ||||||||| |||||||| |||||  |||||||||  ||||||||||| || |||||||||||| ||||||    
T  624921 ttttttttcttttgacaaaataaacgatatattcattcattc-aaattgataaaatacatcgatataatacaaattt 624846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 2234133 - 2234189
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| ||||||||||||||  ||||||||| |||| |||||||||||| |||||    
T  2234133 aaaataaacgatattcattcattc-aaattgatagagtacatcgatataatacaaatt 2234189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 8054477 - 8054533
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||||||||||||| || ||||||||| | || |||||||||||| |||||    
T  8054477 aaaataaatgatattcattca-ttcaaattgatagaatacatcgatataatacaaatt 8054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 9993118 - 9993062
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  9993118 ttttgacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataat 9993062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 16644771 - 16644734
Alignment:
Q  222 aaatgatattcattcattttaaattgataaagtatatc 259  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  16644771 aaatgatattcattcatttcaaattgatagagtatatc 16644734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 31147786 - 31147846
Alignment:
Q  364 aaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    ||||||| ||||| ||||| |||||||||||  ||||||||| ||||||||| ||||||||    
T  31147786 aaccaacctcgcactaagacgacgaaatcacaaaataaaaagcgaaatagatgtgaaaatc 31147846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 32413242 - 32413186
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||| ||||||||||||||||||||||| || ||||||||| |||| || ||||||||    
T  32413242 tttttataaaataaatgatattcattca-ttcaaattgatagagtacattgatataat 32413186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 37613102 - 37613046
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| ||||||||||||||  ||||||||| |||||||||||| |||| |||||    
T  37613102 aaaataaacgatattcattcattc-aaattgatagagtatatcgatacaatacaaatt 37613046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 7579522 - 7579573
Alignment:
Q  221 taaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    ||||||||||||||||| || ||||||||| |||| ||||||| |||||||||    
T  7579522 taaatgatattcattca-ttcaaattgatagagtacatcgatacaatataaat 7579573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 26912093 - 26912038
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||| |||||||||||||||||| | | ||| |||||||||    
T  26912093 aaaataaacgatattcattc-ttttaaattgataaagtacaacaatacaatataaat 26912038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 28296778 - 28296833
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    ||||||||||||||||||||| || ||||||||| |||| ||||||| |||| ||||    
T  28296778 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatacaatacaaat 28296833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 31202914 - 31202859
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  ||||||||| |||| |||||||||||| ||||    
T  31202914 aaaataaacgatattcattcattc-aaattgatagagtacatcgatataatacaaat 31202859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 31712743 - 31712790
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatata 265  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||||    
T  31712743 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatata 31712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 36545843 - 36545891
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    ||||||||||||| |||||||||||||| || |||| ||| ||||||||    
T  36545843 gggaaagagaaaaacgagttagaggggtgatattgggtcacaaattgac 36545891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 36868474 - 36868416
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    |||||||| ||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  36868474 aaaataaacgatattcattcattc-aaattgatagagtatatcgatataatataaattta 36868416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 5930586 - 5930492
Alignment:
Q  330 aaaaacaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    ||||||||||||   ||||| || |||| ||||||||||||||||||  |||| |||||||||||  ||||||||  ||||||||| ||||||||    
T  5930586 aaaaacaaacaacgtcgcacaaaaacgacgaacaaaccaacatcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatc 5930492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 7640418 - 7640472
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  7640418 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaa 7640472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 11931317 - 11931268
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||    
T  11931317 aaaataaatgatattcattca-ttcaaattgataaagtacatcgatataat 11931268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 41842087 - 41842018
Alignment:
Q  354 acgatgaacaaaccaacatcgcattaagatgacgaaatcacaataaaaagtgaaatagatttgaaaatcg 423  Q
    |||| |||||||||||| ||||| ||||| ||||||||||||| || ||  ||||||||| |||||||||    
T  41842087 acgacgaacaaaccaacgtcgcactaagacgacgaaatcacaaaaagaaacgaaatagatgtgaaaatcg 41842018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 23256302 - 23256348
Alignment:
Q  219 aataaatgatattcattcattttaaattgataaagtatatcgatataa 266  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||    
T  23256302 aataaatgatattcattca-ttcaaattgataaggtatatcgatataa 23256348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 7581762 - 7581807
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgata 263  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||    
T  7581762 aaaataaatgatatttattcattc-aaattgataaagtatatcgata 7581807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 17056258 - 17056296
Alignment:
Q  281 cggcaaagtgcaaaagtctacacatatgacaatattcaa 319  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  17056258 cggcaaagtacaaaagtctacacatatgactatattcaa 17056296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 17068705 - 17068743
Alignment:
Q  281 cggcaaagtgcaaaagtctacacatatgacaatattcaa 319  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  17068705 cggcaaagtacaaaagtctacacatatgactatattcaa 17068743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 17074702 - 17074740
Alignment:
Q  281 cggcaaagtgcaaaagtctacacatatgacaatattcaa 319  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  17074702 cggcaaagtacaaaagtctacacatatgactatattcaa 17074740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 17095275 - 17095313
Alignment:
Q  281 cggcaaagtgcaaaagtctacacatatgacaatattcaa 319  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  17095275 cggcaaagtacaaaagtctacacatatgactatattcaa 17095313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 27191397 - 27191451
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||||| |||| || |||||||||||| |||||    
T  27191397 gggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaa 27191451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 27841211 - 27841265
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||||| |||| || |||||||||||| |||||    
T  27841211 gggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaa 27841265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 28413424 - 28413469
Alignment:
Q  214 gataaaataaatgatattcattcattttaaattgataaagtatatcg 260  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||    
T  28413424 gataaaataaatgatattcattga-tttaagttgataaagtatatcg 28413469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 42105814 - 42105868
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||| ||| ||||||| |||||||||||| |||||    
T  42105814 gggaaatagaaaaacgagttagagtggtgattttgggtcaaaaattgaccctaaa 42105868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 3390875 - 3390819
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  3390875 ttttgaaaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataat 3390819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 9207018 - 9207074
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| ||||||||||| ||||||||| ||| |||||||| |||| |||||||||||    
T  9207018 ttttgacaaaataaatgacattcattca-tttgaattgatagagtacatcgatataat 9207074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 9689640 - 9689696
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| ||||| ||||||||| ||||||||| |||| |||||||||||| |||||    
T  9689640 aaaataaacgatatacattcattt-aaattgatagagtacatcgatataatacaaatt 9689696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 13113477 - 13113421
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| |||||| |||||||| ||||||||| | || ||||||||||||||||||    
T  13113477 aaaataaacgatatttattcattt-aaattgatagaatacatcgatataatataaatt 13113421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 15920319 - 15920263
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||||||||||||| || ||||||||| |||| ||||||| |||| |||||    
T  15920319 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatacaatacaaatt 15920263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 19904955 - 19904899
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||| | |||||||||||||| ||||||||| |||| |||||||||||| |||||    
T  19904955 aaaataattaatattcattcattt-aaattgatatagtacatcgatataatacaaatt 19904899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 25622713 - 25622769
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||| ||||||||| |||||||||||| |||| ||||||| ||| ||||||    
T  25622713 aaaataaatgacattcattca-tttaaattgatagagtacatcgatacaatgtaaatt 25622769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 25771897 - 25771841
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  25771897 ttttgacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataat 25771841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 471
Target Start/End: Original strand, 44167778 - 44167819
Alignment:
Q  430 agaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    |||||| |||||||||||||| ||||||| ||||||||||||    
T  44167778 agaaaaacgagttagaggggtgattttgggtcaaaaattgac 44167819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 4878403 - 4878450
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatata 265  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||||    
T  4878403 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatata 4878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 6089945 - 6089897
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    |||||| |||||| ||| |||||||||| ||||||| ||||||||||||    
T  6089945 gggaaatagaaaaacgaattagaggggtgattttgggtcaaaaattgac 6089897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 6090053 - 6089962
Alignment:
Q  330 aaaaacaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcacaataaaaagtgaaatagatttgaaaatc 422  Q
    ||||||||||||   ||||| || | ||||||||| |||||||||||  |||| ||||||||||||| | |||  ||||||||| ||||||||    
T  6090053 aaaaacaaacaacgtcgcacaaagaagatgaacaa-ccaacatcgcacgaagacgacgaaatcacaaaataaaacgaaatagatgtgaaaatc 6089962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 16136544 - 16136489
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  ||||||||| |||| |||||||||||| ||||    
T  16136544 aaaataaacgatattcattcattc-aaattgatagagtacatcgatataatacaaat 16136489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 25855282 - 25855336
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||||| |||||    
T  25855282 gggaaagagaaaaacgagttagagggatgattttggatcaaaaattgaccctaaa 25855336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 23732063 - 23732119
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||    
T  23732063 aaaataaatgatattcattca-tttaaattgataaagtacattgatataatgtaaatt 23732119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 26017327 - 26017383
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||||    
T  26017327 aaaataaatgatattcattcattc-aaattgatagagtacatcgatataatataaatt 26017383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 134797 - 134871
Alignment:
Q  200 ttttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattt 275  Q
    ||||||||| |||| | |||||||| |||||||||||| || ||||||||| |||| ||||||||||| |||||||    
T  134797 ttttttatttttttaacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataatgtaaattt 134871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 200 - 273
Target Start/End: Complemental strand, 10574848 - 10574776
Alignment:
Q  200 ttttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||| || |||||| ||||||||||||||||||||| || ||||||||| |||| ||| ||| |||||||||    
T  10574848 ttttttttttttttgacaaaataaatgatattcattca-ttcaaattgatagagtacatcaatacaatataaat 10574776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 37400043 - 37399987
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||| |||||||||||||  ||||||||| |||||||||||||||| ||||||    
T  37400043 aaaataaattatattcattcattc-aaattgatagagtatatcgatataatgtaaatt 37399987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 40016568 - 40016605
Alignment:
Q  237 attttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||||||||||||||||||||||||||| |||||    
T  40016568 attttaaattgataaagtatatcgatataatacaaatt 40016605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 43847439 - 43847384
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||| |||| ||||    
T  43847439 aaaataaatgatattcattca-ttcaaattgatagagtatatcgatacaatacaaat 43847384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 44482533 - 44482588
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  ||||||||| |||| |||||||||||||||||    
T  44482533 aaaataaacgatattcattcattc-aaattgatagagtacatcgatataatataaat 44482588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 47749786 - 47749738
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    ||||||||||||| |||| ||||||||| ||||||| ||||||||||||    
T  47749786 gggaaagagaaaaacgagatagaggggtgattttgggtcaaaaattgac 47749738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 8319779 - 8319713
Alignment:
Q  199 attttttattcttttgataaaat-aaatgatattcattcattttaaattgataaagtatatcgatata 265  Q
    |||||||||| |||||| ||||  |||||||||||||||| |||||||||||| |||| |||||||||    
T  8319779 attttttatttttttgacaaaaacaaatgatattcattca-tttaaattgatagagtacatcgatata 8319713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 7986337 - 7986280
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattt 275  Q
    |||||||| ||||||||||||||  ||||||||| |||| |||||||||||| ||||||    
T  7986337 aaaataaaagatattcattcattc-aaattgatagagtagatcgatataatacaaattt 7986280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 24470447 - 24470401
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattg 469  Q
    |||||| |||||| |||||||||||||| ||||||| ||||||||||    
T  24470447 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattg 24470401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 24475395 - 24475349
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattg 469  Q
    |||||| |||||| |||||||||||||| ||||||| ||||||||||    
T  24475395 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattg 24475349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 477
Target Start/End: Complemental strand, 28015392 - 28015354
Alignment:
Q  439 agttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  28015392 agttagaggggtgattttggatcaaaaattgaccctaaa 28015354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 30992493 - 30992542
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||||||    
T  30992493 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatataat 30992542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 431 - 477
Target Start/End: Complemental strand, 40775311 - 40775265
Alignment:
Q  431 gaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||| ||||||| |||||| |||||||||||||||||||| |||||    
T  40775311 gaaaaacgagttataggggtgattttggatcaaaaattgaccctaaa 40775265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 43806819 - 43806868
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||| |||||||||||||| ||||||||| |||| |||||||||||    
T  43806819 aaaataaattatattcattcattt-aaattgatagagtacatcgatataat 43806868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 47750190 - 47750123
Alignment:
Q  210 ttttgataaaataaatgatattcattcat---tttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||| |||||||| |||||||||||||   || ||||||||| |||| ||||||||||| ||||||    
T  47750190 ttttgacaaaataaaagatattcattcattcattcaaattgatagagtacatcgatataatgtaaatt 47750123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 345 - 422
Target Start/End: Original strand, 135111 - 135190
Alignment:
Q  345 cgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    ||||| || |||| |||||||||||| |||||  |||| |||||||||||  |||| ||| |||||||||| ||||||||    
T  135111 cgcacaaaaacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaatacaaaatgaaatagatgtgaaaatc 135190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 2623058 - 2623003
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  ||||||||| |||| ||| |||||||||||||    
T  2623058 aaaataaacgatattcattcattc-aaattgatagagtacatctatataatataaat 2623003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 17508863 - 17508914
Alignment:
Q  221 taaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||||||||||| ||||||||||||| |||| ||||||| |||| ||||    
T  17508863 taaatgatattcattc-ttttaaattgatagagtacatcgatacaatacaaat 17508914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 17544351 - 17544300
Alignment:
Q  221 taaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||||||||||| ||||||||||||| |||| ||||||| |||| ||||    
T  17544351 taaatgatattcattc-ttttaaattgatagagtacatcgatacaatacaaat 17544300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 24319878 - 24319933
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| |||||||||||| |||||||||||| |||| ||||||| |||| ||||    
T  24319878 aaaataaacgatattcattca-tttaaattgatagagtacatcgatacaatacaaat 24319933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 477
Target Start/End: Original strand, 38649438 - 38649474
Alignment:
Q  441 ttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  38649438 ttagaggggtgattttgggtcaaaaattgactctaaa 38649474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 46025710 - 46025765
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||| |||| ||||    
T  46025710 aaaataaacgatattcattcattc-aaattgataaagtacatcgatacaatacaaat 46025765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 48304047 - 48304102
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||| |||| ||||    
T  48304047 aaaataaacgatattcattcattc-aaattgataaagtacatcgatacaatacaaat 48304102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 6886829 - 6886896
Alignment:
Q  199 attttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||| || |||||| |||||||| |||||||||||| |||||||||||| |||| |||||||||||    
T  6886829 attttttttttttttgacaaaataaaagatattcattca-tttaaattgatagagtacatcgatataat 6886896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 426 - 471
Target Start/End: Original strand, 34893981 - 34894026
Alignment:
Q  426 aaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||    
T  34893981 aaagagaaaaacgagttagaggggtgattttgggtcaaaaattgac 34894026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 9196686 - 9196744
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    |||||||| ||||||||||||||  ||||||||| |||| || |||||||||||||||||    
T  9196686 aaaataaacgatattcattcattc-aaattgatagagtacattgatataatataaattta 9196744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 15710594 - 15710551
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaa 466  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||    
T  15710594 gggaaagagaaaaacgagttagaggggtgattttggataaaaaa 15710551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 41988236 - 41988189
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattga 470  Q
    ||||||||||||| |||||||||||||  |||||| ||||||||||||    
T  41988236 gggaaagagaaaaacgagttagaggggcgattttgaatcaaaaattga 41988189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 5378747 - 5378698
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||||||    
T  5378747 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatataat 5378698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 477
Target Start/End: Original strand, 29310427 - 29310465
Alignment:
Q  439 agttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  29310427 agttagaggggtgattttggatcaaaaattgaccctaaa 29310465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 477
Target Start/End: Complemental strand, 31645865 - 31645827
Alignment:
Q  439 agttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  31645865 agttagaggggtgattttggatcaaaaattgaccctaaa 31645827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 39308422 - 39308471
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||||||||| || || ||||||||||| |||||||||||    
T  39308422 aaaataaatgatattcattca-ttcaatttgataaagtacatcgatataat 39308471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 6281518 - 6281454
Alignment:
Q  210 ttttgataaaa-taaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||| |||| ||||||||||||||  ||||||||| |||||||||||| |||| |||||    
T  6281518 ttttgataaaagtaaacgatattcattcattc-aaattgatagagtatatcgatacaatacaaatt 6281454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 11734500 - 11734556
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||| |||| |||||    
T  11734500 aaaataaacgatattcattcattc-aaattgataaagtacatcgatacaatacaaatt 11734556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 17218168 - 17218112
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||||||||||||| || ||||||||| |||| ||||||| |||| |||||    
T  17218168 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatacaataaaaatt 17218112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 31646281 - 31646225
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  31646281 ttttgacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataat 31646225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 32309962 - 32309906
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| |||||| |||||||  ||||||||| |||| ||||||||||||||||||    
T  32309962 aaaataaacgatattgattcattc-aaattgatagagtacatcgatataatataaatt 32309906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 41358479 - 41358423
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||| |||||||||||||||||  ||||||||| |||| ||||||||||| ||||||    
T  41358479 aaaatgaatgatattcattcattc-aaattgatagagtacatcgatataatgtaaatt 41358423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 43415669 - 43415613
Alignment:
Q  219 aataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    ||||||||||||||||  |||  |||| ||||||||||||| ||||||||||||||||    
T  43415669 aataaatgatattcatctattc-aaatcgataaagtatatcaatataatataaattta 43415613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 19646103 - 19646151
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    |||||||||||||  ||||||||||||| ||||||| ||||| ||||||    
T  19646103 gggaaagagaaaaatgagttagaggggtgattttgggtcaaacattgac 19646151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 28618656 - 28618608
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgac 471  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||    
T  28618656 gggaaatagaaaaacgagttagaggggtgattttgggttaaaaattgac 28618608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 39179500 - 39179555
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaat 273  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||| |||| ||||    
T  39179500 aaaataaacgatattcattcattc-aaattgataaagtacatcgatacaatacaaat 39179555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 41358088 - 41358036
Alignment:
Q  426 aaagagaaaagcgagttagagggg-taattttggatcaaaaattgactctaaa 477  Q
    |||||||||| ||||||||||||| | ||||||| |||||||||||| |||||    
T  41358088 aaagagaaaaacgagttagagggggtgattttgggtcaaaaattgaccctaaa 41358036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 11223 - 11281
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||| |||| |||||||    
T  11223 aaaataaatgatattaattcattt-aaattgatagagtatatcgatacaataaaaattta 11281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000006; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 17348041 - 17347983
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    |||||||| |||||||| |||||| ||||||||| |||| ||||||||||||||||||||    
T  17348041 aaaataaacgatattcactcattt-aaattgatagagtacatcgatataatataaattta 17347983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 43504263 - 43504205
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    ||||||||||||||||||| |||| | ||||||| |||||||| ||||||||||||||||    
T  43504263 aaaataaatgatattcatttattt-acattgatagagtatatcaatataatataaattta 43504205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 23257537 - 23257484
Alignment:
Q  213 tgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||    
T  23257537 tgataaaataaatgatatttattca-tttaaattgatagagtacatcgatataat 23257484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 44562811 - 44562865
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  44562811 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaa 44562865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 15276101 - 15276164
Alignment:
Q  203 tttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| |||||| |||||||| |||||||||||| || ||||||||| |||| |||||||||||    
T  15276101 tttatttttttgacaaaataaaagatattcattca-ttcaaattgatagagtacatcgatataat 15276164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 13999425 - 13999352
Alignment:
Q  199 attttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||| || |||| |||||||||| |||||||||| |||| |||||| ||||||||||||||| |||| |||||    
T  13999425 atttttttttttttttataaaataaa-gatattcatttattt-aaattggtaaagtatatcgatagaatacaaatt 13999352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 51418468 - 51418394
Alignment:
Q  200 ttttttattcttttgataaaa-taaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||| || |||||| |||| |||| ||||||||||||||| ||||||||| |||| |||||||||||| |||||    
T  51418468 ttttttttttttttgacaaaagtaaacgatattcattcattt-aaattgatagagtacatcgatataatacaaatt 51418394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 5832285 - 5832231
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| |||||||||||||| |||| || |||||||||||| |||||    
T  5832285 gggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaa 5832231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 6212578 - 6212639
Alignment:
Q  212 ttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||| |||||||| |||||| |||||||  ||||||||| |||||||||||||||| ||||||    
T  6212578 ttgacaaaataaaagatatttattcattc-aaattgatagagtatatcgatataatgtaaatt 6212639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 44562704 - 44562766
Alignment:
Q  334 acaaacaataccgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcacaa 396  Q
    |||||||||  ||||| || |||| |||||||||||| |||||  ||||||||||||||||||    
T  44562704 acaaacaatgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagatgacgaaatcacaa 44562766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 49652280 - 49652231
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||||||    
T  49652280 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatataat 49652231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 900512 - 900440
Alignment:
Q  201 tttttattcttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||||||||   ||||||||| ||||||||||| || ||||||||| |||| ||||||| ||| ||||||    
T  900512 tttttattcttttacaaaaataaattatattcattca-ttcaaattgatagagtacatcgatacaatgtaaatt 900440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 468
Target Start/End: Complemental strand, 8893345 - 8893300
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaatt 468  Q
    ||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  8893345 gggaaagagaaaaacgagttagaagggtgattttgggtcaaaaatt 8893300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 476
Target Start/End: Complemental strand, 17579820 - 17579767
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaa 476  Q
    |||||||||||||  ||||||||||| | ||||||| |||||||||||| ||||    
T  17579820 gggaaagagaaaaatgagttagagggatgattttggttcaaaaattgaccctaa 17579767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 26771551 - 26771495
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||||||||||||| || ||||||||| |||| ||||||| |||| |||||    
T  26771551 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatacaatacaaatt 26771495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 38644459 - 38644515
Alignment:
Q  210 ttttgataaaataaatgatattcattcattttaaattgataaagtatatcgatataat 267  Q
    |||||| ||||||||| ||||||||||| |||||||||||| |||| ||| |||||||    
T  38644459 ttttgacaaaataaattatattcattca-tttaaattgatagagtacatcaatataat 38644515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 460
Target Start/End: Complemental strand, 40992386 - 40992349
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggat 460  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  40992386 gggaaagagaaaaacgagttagaggggtgattttggat 40992349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 423956 - 424003
Alignment:
Q  226 gatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||||||  |||| |||||||||||||||||||||| |||||    
T  423956 gatattcattcattc-aaatcgataaagtatatcgatataatacaaatt 424003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 12967402 - 12967449
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatata 265  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||||    
T  12967402 aaaataaatgatattcattca-ttcaaattgatagagtacatcgatata 12967449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 13691826 - 13691874
Alignment:
Q  429 gagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||| |||||    
T  13691826 gagaaaaacgatttagaggggtgattttgggtcaaaaattgaccctaaa 13691874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 23320492 - 23320448
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaat 467  Q
    |||||| |||||| |||||||||||||| ||||||| ||||||||    
T  23320492 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaat 23320448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 25032739 - 25032814
Alignment:
Q  199 attttttattcttttgataaaa-taaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||||| |||| |||||| |||| |||||||||||| || ||||||||| |||| ||||||| |||| |||||    
T  25032739 attttttattttttttataaaaataaacgatattcattca-ttcaaattgatagagtacatcgatacaatacaaatt 25032814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 52752080 - 52752036
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaat 467  Q
    |||||| |||||| |||||||||| ||| ||||||||||||||||    
T  52752080 gggaaaaagaaaaacgagttagagaggtgattttggatcaaaaat 52752036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 345 - 422
Target Start/End: Original strand, 1107 - 1186
Alignment:
Q  345 cgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    ||||| ||||||| |||||||||||| ||||| ||||| |||||||||||  ||||||||   |||||||| ||||||||    
T  1107 cgcacaaatacgacgaacaaaccaacgtcgcactaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatc 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 3361 - 3303
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattta 276  Q
    |||||||| ||||||||||||||  ||||||||| |||| ||||||| ||||||||||||    
T  3361 aaaataaacgatattcattcattc-aaattgatagagtacatcgatacaatataaattta 3303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 5195 - 5252
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaattt 275  Q
    ||||||||||||||||||||| || ||||| ||| |||| |||||||||||| ||||||    
T  5195 aaaataaatgatattcattca-ttcaaatttatagagtacatcgatataatacaaattt 5252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 6787 - 6841
Alignment:
Q  220 ataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||| ||||||||||||||| ||||||||| |||| ||||||| |||| |||||    
T  6787 ataaacgatattcattcatttcaaattgatagagtacatcgatacaatacaaatt 6841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 9710 - 9764
Alignment:
Q  423 gggaaagagaaaagcgagttagaggggtaattttggatcaaaaattgactctaaa 477  Q
    |||||| |||||| ||||||||||| || ||||||| |||||||||||| |||||    
T  9710 gggaaatagaaaaacgagttagaggagtgattttgggtcaaaaattgaccctaaa 9764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 2103 - 2159
Alignment:
Q  217 aaaataaatgatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    |||||||| ||||||||||||||  |||||||||||||| ||||||| |||| |||||    
T  2103 aaaataaacgatattcattcattc-aaattgataaagtacatcgatacaatacaaatt 2159  T

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Target: scaffold0312 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 6593 - 6546
Alignment:
Q  226 gatattcattcattttaaattgataaagtatatcgatataatataaatt 274  Q
    ||||||||||||||  |||| |||||||||||||||||||||| |||||    
T  6593 gatattcattcattc-aaatcgataaagtatatcgatataatacaaatt 6546  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 36677 - 36598
Alignment:
Q  345 cgcacgaatacgatgaacaaaccaacatcgcattaagatgacgaaatcac--aataaaaagtgaaatagatttgaaaatc 422  Q
    ||||| || |||| |||||||||||| |||||  |||| |||||||||||  |||||||| | |||||||| ||||||||    
T  36677 cgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaataaaatagatgtgaaaatc 36598  T

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