View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20485_low_3 (Length: 544)
Name: NF20485_low_3
Description: NF20485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20485_low_3 |
 | |
|
| [»] scaffold0002 (5 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 457; Significance: 0; HSPs: 54)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 457; E-Value: 0
Query Start/End: Original strand, 20 - 528
Target Start/End: Complemental strand, 10517896 - 10517388
Alignment:
| Q |
20 |
tactaccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaacttt |
119 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10517896 |
tactaccaaatgcatgttttgagagtaaagaccaacaatcttcatgagatagaggttctaattcctgaataggaaatgtgtgtgccacctctgcaacttt |
10517797 |
T |
|
| Q |
120 |
ttgttggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatca |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10517796 |
ttgttggcgcgttgttataatcaccgaactcccgggttttccatcattgagtggacttactagttcaagccaatcattgtaatcatcattccacaaatca |
10517697 |
T |
|
| Q |
220 |
tctaacacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatg |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10517696 |
tctaacacaaacaaaaatcttttctccctcgagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatg |
10517597 |
T |
|
| Q |
320 |
ttgtatttctaacaactgattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttc |
419 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10517596 |
ttgtatttctaacaatagattcaaggatagacttggttgctctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttc |
10517497 |
T |
|
| Q |
420 |
aacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtg |
519 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10517496 |
aacttttgcatcattgtaaacaaactgtgcaagggtcgttttaccgacgcctcccatacccacaattgcagcaacacctaaattattatttctgcttgtg |
10517397 |
T |
|
| Q |
520 |
ccaacatct |
528 |
Q |
| |
|
||||||||| |
|
|
| T |
10517396 |
ccaacatct |
10517388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 11 - 520
Target Start/End: Original strand, 11781631 - 11782140
Alignment:
| Q |
11 |
cacagaccgtactaccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctc |
110 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
11781631 |
cacagtccttactaccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaatgcatgaataggaaatgtgtgtgccacctc |
11781730 |
T |
|
| Q |
111 |
tgcaactttttgttggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattc |
210 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11781731 |
tgcaactttttgttggcgagttgttataatcaccgaacttccaggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattc |
11781830 |
T |
|
| Q |
211 |
cacaaatcatctaacacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11781831 |
cacaaatcatctaacacaaacaaaaatcttttctccctcgagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgaag |
11781930 |
T |
|
| Q |
311 |
cagctgatgttgtatttctaacaactgattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaa |
410 |
Q |
| |
|
||| |||||||||| || ||||||| |||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
11781931 |
cagatgatgttgtacttttaacaacagattcaaggagagacttggttattctaacaacatcgaaatcctccgatacacaaacccagactttgaaatcaaa |
11782030 |
T |
|
| Q |
411 |
atgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattattt |
510 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
11782031 |
atgttgttcaactttcacatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccaaaattgcgacaacacctaaattattattt |
11782130 |
T |
|
| Q |
511 |
ctgcttgtgc |
520 |
Q |
| |
|
||||| |||| |
|
|
| T |
11782131 |
ctgctggtgc |
11782140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 28 - 522
Target Start/End: Complemental strand, 10527761 - 10527267
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||| | ||| || || ||| |||||||||||| | |||||||| ||||||||| ||||| |
|
|
| T |
10527761 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgataaaagttttagtttatgtataggaaatgtgcgtgccacctcagcaacttttcgttggt |
10527662 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| | |||||| ||||| |
|
|
| T |
10527661 |
gggttgttataatcaccatacttccaggttttccatcaatgagtggacttactagctcatcccaatcattgtaattgtcattccatagatcatccaacac |
10527562 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtattt |
327 |
Q |
| |
|
|||||||||||| |||||||| || | || || || | ||||||||||||||||||||||| ||||||||| |||||||| ||| |||| ||||||| |
|
|
| T |
10527561 |
aaacaaaaatctcttctcccttgagattttctttaactgaactcgaaggatatcaagattattgctttcccagacctttgaagcagaagatgatgtattt |
10527462 |
T |
|
| Q |
328 |
ctaacaactgattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttg |
427 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||| | |||||| |||||||| |||||| |||||||||| |||| ||||||||| |||||||| ||| |
|
|
| T |
10527461 |
ctaacaacagattcaatgagagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaacctttt |
10527362 |
T |
|
| Q |
428 |
catcattgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgcca |
522 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
10527361 |
catcattgtaaacaagttgtgcaagggttgttttaccgacacctcccatacccaagattgcaacaacacctaaattattatttctactggtgcca |
10527267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 28 - 300
Target Start/End: Original strand, 10433710 - 10433982
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||| |||||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
10433710 |
aatgcatgcttcgagagtaaagaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttggc |
10433809 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| ||| || ||||| |
|
|
| T |
10433810 |
gcgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatcgtccaacac |
10433909 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||||||| |||| || || || ||||| ||||||| ||||||||||| ||| |||||| |
|
|
| T |
10433910 |
aaacaaaaatcttttctccctcgagtttttctttaactcaacacgaaggacatcaagattattgctatcccaa |
10433982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 28 - 300
Target Start/End: Complemental strand, 11769637 - 11769365
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| ||| ||||||||| |||||||||||||| |||||||| ||||||||| |||||| |
|
|
| T |
11769637 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagttttaattcatgtataggaaatgtgtgtgccacctcagcaacttttcgttggc |
11769538 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||| | ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||||||||| |
|
|
| T |
11769537 |
gtgttgttataatcaccatgcttccaggttttccattactgaagggacttactagttcaccccaatcattataattgtcattccacatatcatctaacac |
11769438 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||| || || || ||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
11769437 |
aaacaaaaatcttttctccctcaagtttttctttaactcaactcgaaggatatcaagattattgctatcccaa |
11769365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 28 - 299
Target Start/End: Complemental strand, 9839264 - 9838993
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| | ||||||| ||| || ||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
9839264 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggc |
9839165 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| ||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
9839164 |
gcgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacac |
9839065 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttccca |
299 |
Q |
| |
|
||||||||||||||||||||| |||| || || || |||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
9839064 |
aaacaaaaatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatccca |
9838993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 28 - 299
Target Start/End: Complemental strand, 9850142 - 9849871
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| | ||||||| ||| || ||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
9850142 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggc |
9850043 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| ||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
9850042 |
gtgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacac |
9849943 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttccca |
299 |
Q |
| |
|
||||||||||||||||||||| |||| || || || |||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
9849942 |
aaacaaaaatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatccca |
9849871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 24 - 528
Target Start/End: Complemental strand, 10500981 - 10500480
Alignment:
| Q |
24 |
accaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgt |
123 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||| || |||| ||||||||||||||||| |||||||||||||||| || |||||||||||||||||| |
|
|
| T |
10500981 |
accaaatgcatgcttcgagagtaaagtccaacaatcatcatcagatagaggttctaatttatgaataggaaatgtgcatgcgacctctgcaactttttgt |
10500882 |
T |
|
| Q |
124 |
tggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatcta |
223 |
Q |
| |
|
| ||| |||||||| ||||| | ||| | || || | | | | ||| ||| || |||| ||| ||| ||| |||||||||| || || | |
|
|
| T |
10500881 |
tcgcgtgttgttattatcactttgcctcctgtttctctgttagtcaagggagttattaactcatcccagtcaacataactgtcattccacatgtcgtcca |
10500782 |
T |
|
| Q |
224 |
acacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgt |
323 |
Q |
| |
|
||||||||||||||||| | ||| |||| | || | || |||||| |||||||||||||||||| |||||| ||| |||| | |||||||| |
|
|
| T |
10500781 |
acacaaacaaaaatcttctatccatcaaatgtttcattaactcaacttgaaggatatcaagattattgctttcg---accattgaattgacagatgttgt |
10500685 |
T |
|
| Q |
324 |
atttctaacaactgattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaact |
423 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| ||| | |||||| |||||||| | |||||||| ||| || || | ||||||||||| ||||| | |
|
|
| T |
10500684 |
atttctaacaacagattcaaggagagatttggttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaatt |
10500585 |
T |
|
| Q |
424 |
tttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgccaa |
523 |
Q |
| |
|
|| | || ||||||||||| || ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
10500584 |
ttatcgtcgttgtaaacaagttgagcaagtgttgttttaccgacgcctcccatacccaaaattgcaacaacacctaaattattatttctgcctgttccaa |
10500485 |
T |
|
| Q |
524 |
catct |
528 |
Q |
| |
|
|||| |
|
|
| T |
10500484 |
tatct |
10500480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10663929 - 10663671
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| ||||||| |||||| ||||||||| ||| |||||||||||||| |||||||| ||||||||||||| || |
|
|
| T |
10663929 |
aatgcatgctttgaaagtaaggaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttcgc |
10663830 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| |||||| |||| ||| ||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
10663829 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttgctagttcactccaatcattataattgtcattccacagatcatcgaacac |
10663730 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
|||||||||||||||||||||| || | || || || ||||||||||||| |||||||| |
|
|
| T |
10663729 |
aaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagat |
10663671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10089193 - 10088935
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || |||||||||| |||||| ||||||| || ||| ||||||||| ||| |||||||||||||| |||||||| || ||||||| ||||| |
|
|
| T |
10089193 |
aatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10089094 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
10089093 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattataattgtcattccacagatcatccaacac |
10088994 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
|||||||||||||||||||||| |||| || || || |||||| |||||| | |||||| |
|
|
| T |
10088993 |
aaacaaaaatcttttctccctcgagtttttctttaactcaacttgaaggacaccaagat |
10088935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10196076 - 10195818
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || |||||||||| |||||| ||||||| || ||| ||||||||| ||| |||||||||||||| |||||||| || ||||||| ||||| |
|
|
| T |
10196076 |
aatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10195977 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
10195976 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattataattgtcattccacagatcatccaacac |
10195877 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
|||||||||||||||||||||| |||| || || || |||||| |||||| | |||||| |
|
|
| T |
10195876 |
aaacaaaaatcttttctccctcgagtttttctttaactcaacttgaaggacaccaagat |
10195818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 21 - 299
Target Start/End: Original strand, 10375504 - 10375782
Alignment:
| Q |
21 |
actaccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttt |
120 |
Q |
| |
|
|||||| |||||||| || ||||||||||||||||| ||||||| |||||| ||| || |||||| |||||||||||| || |||| ||||||||| |
|
|
| T |
10375504 |
actacccaatgcatgctttgagagtaaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtgcatgctaccttagcaactttt |
10375603 |
T |
|
| Q |
121 |
tgttggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcat |
220 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| |||||||| |||| |||||||||||||||| |
|
|
| T |
10375604 |
cgttggcgcgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcataataattgtcattccacaaatcat |
10375703 |
T |
|
| Q |
221 |
ctaacacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttccca |
299 |
Q |
| |
|
| |||||||||||||||||||||||||| | || || || || |||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
10375704 |
ccaacacaaacaaaaatcttttctcccttgattttttctttaacgcaactcgaaggacatcaagattattgctatccca |
10375782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 30 - 297
Target Start/End: Original strand, 10363466 - 10363733
Alignment:
| Q |
30 |
tgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgc |
129 |
Q |
| |
|
|||||| || |||||||||| |||||| ||||||| |||||| | ||||||| ||| |||||||||||||| |||||||| || ||||||| ||||||| |
|
|
| T |
10363466 |
tgcatgctttgagagtaaagtccaacaatcttcatttgatagaagatctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggcgc |
10363565 |
T |
|
| Q |
130 |
gttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaa |
229 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||| ||| || |||||||| ||| ||||||||| |||| |||||||||| ||| || ||||||| |
|
|
| T |
10363566 |
gttgttataatcaccatgcttccaggttttccatcaatgaaggggcttactagttcaccccaatcattataattgtcattccacagatcgtccaacacaa |
10363665 |
T |
|
| Q |
230 |
acaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcc |
297 |
Q |
| |
|
||||| |||||||||||||| || | || || || ||||||||||||| ||||||||||| ||||||| |
|
|
| T |
10363666 |
acaaatatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctttcc |
10363733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10032406 - 10032148
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| ||| || |||||| |||||||||||| |||||||| ||||||||| |||||| |
|
|
| T |
10032406 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgcatgccacctcagcaacttttcgttggc |
10032307 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||| || || |
|
|
| T |
10032306 |
gtgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatcatccaaaac |
10032207 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
|||||||||||||||||||||| || | || || || ||||||||||||| |||||||| |
|
|
| T |
10032206 |
aaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagat |
10032148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10077672 - 10077414
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || |||||| ||||||| ||||||| |||| |||||||||| ||| |||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
10077672 |
aatgcatgctttgaaagtaaataccaacaatcttcatttgataaaggttctaatatatgtataggaaatgtgcgtgccacctctgcaactttttgttggc |
10077573 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| ||||| | ||||||||| ||| |||||||| || ||| ||||||| | |||| |||||||||| |||||||||||| |
|
|
| T |
10077572 |
gtgttgttataatcaccatgcttccatgctttccatcaatgaagggacttacaagttcatcccaatcactataattgtcattccacatatcatctaacac |
10077473 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||| || ||||||||||||| |||||||| |
|
|
| T |
10077472 |
aaacaaaaatcttttatccctcgagtttttttttaactcaactcgaaggacatcaagat |
10077414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 28 - 289
Target Start/End: Complemental strand, 10261101 - 10260840
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| ||| || |||||| |||||||||||| |||||||| |||||||||||||| | |
|
|
| T |
10261101 |
aatgcatgctttgagagtaaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtgcatgccacctcagcaactttttgttgcc |
10261002 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| || || |||||||| ||| ||||||||| |||| |||||||||| ||| || ||||| |
|
|
| T |
10261001 |
gcgttgttataatcaccatgcttccaggttttccatcaacgaaggggcttactagttcaccccaatcattataattgtcattccacagatcgtccaacac |
10260902 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||||||||||| || | || || || |||||||||||||| |||||||||| |
|
|
| T |
10260901 |
aaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggatgtcaagattat |
10260840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 28 - 300
Target Start/End: Complemental strand, 10184645 - 10184373
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || |||||||| |||||||| ||||||| |||||| ||| || |||||| |||||||||||||| |||||||| || ||||||| ||||| |
|
|
| T |
10184645 |
aatgcatgctttgagagtaacgaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10184546 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||||| |||||||| ||| |||||||||| |||||| || || |
|
|
| T |
10184545 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagctcatcccaatcatcataactgtcattccacagatcatccaatac |
10184446 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
||||||||||||||||||||| | | || || || ||||||||||||| ||||||||||| ||| |||||| |
|
|
| T |
10184445 |
aaacaaaaatcttttctcccttgaatgtttctttaactcaactcgaaggacatcaagattattgctatcccaa |
10184373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 40 - 297
Target Start/End: Complemental strand, 10580992 - 10580735
Alignment:
| Q |
40 |
gagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataa |
139 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||| | ||| | || ||| |||| |||| || || |||||||||||||||||||||||||| |
|
|
| T |
10580992 |
gagagtaaagaccaacaatcttcatttgatagaggttctaaattatgtacagcaaacatgtgtgccatctttgtaactttttgttggcgcgttgttataa |
10580893 |
T |
|
| Q |
140 |
tcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatct |
239 |
Q |
| |
|
||||| ||||| |||||||||| | ||| ||||||||||||||| ||||||||| ||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
10580892 |
tcaccatgcttccaggttttccattaatgaagggacttactagctcatcccaatcattacaattgtcattccacagatcatccaacacaaacaaaaatct |
10580793 |
T |
|
| Q |
240 |
tttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcc |
297 |
Q |
| |
|
||||||||| || | || || || ||||| ||||||| ||||||||||| ||||||| |
|
|
| T |
10580792 |
tttctcccttgagattttctttaactcaacacgaaggacatcaagattattgctttcc |
10580735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 28 - 300
Target Start/End: Complemental strand, 10127331 - 10127059
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || |||||||||||||| ||||||| ||||| || || |||||| |||||||||||| | |||||||| |||||||||||||||| |
|
|
| T |
10127331 |
aatgcatgctttgatagtaaagaccaacaatcttcatctgatagtacttttagttcatgtataggaaatgtgcgtgccacctcagcaactttttgttggc |
10127232 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| | ||| ||||||||||||||| ||||||||| ||| |||||||| | ||| || ||||| |
|
|
| T |
10127231 |
gcgttgttataatcaccatgcttccaggttttccattaatgaagggacttactagctcatcccaatcattacaattgtcattccatagatcgtccaacac |
10127132 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
||||||||||||||| |||||| || | || || || |||||||||||| ||||||||||| ||| |||||| |
|
|
| T |
10127131 |
aaacaaaaatcttttttccctcgagattttctttaacgcaactcgaaggacatcaagattattgctatcccaa |
10127059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 337 - 508
Target Start/End: Original strand, 10375799 - 10375970
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| | || ||||||||||||||| |||||| |||| || || |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
10375799 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
10375898 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||||||| ||||||||||| ||||| || | |||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
10375899 |
aaacaagttgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
10375970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 337 - 508
Target Start/End: Complemental strand, 10032118 - 10031947
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||||||| |||||||| |||| ||||||||||||||| |||||| ||||||| || |||||||||||||||| ||||| | |||||||| |
|
|
| T |
10032118 |
gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaagcccaggccttcaaatcaaaatgttgttgaacttctttatcattgt |
10032019 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
10032018 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
10031947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 337 - 508
Target Start/End: Complemental strand, 10127043 - 10126872
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||| | |||||||| |
|
|
| T |
10127043 |
gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgt |
10126944 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
10126943 |
aaacaagttgggcaagggtagtttttcccaaacctcccatgcccaaaattgcaacaacacctatattattat |
10126872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 337 - 508
Target Start/End: Complemental strand, 10663641 - 10663470
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||| | |||||||| |
|
|
| T |
10663641 |
gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgt |
10663542 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
10663541 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
10663470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 337 - 506
Target Start/End: Original strand, 10363752 - 10363921
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||| | |||||||| |
|
|
| T |
10363752 |
gattcaaggagagactttgttactctcataatatcaaaatcctcagagacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgt |
10363851 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattatt |
506 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| || | ||||||||||||||||| |||||| |
|
|
| T |
10363852 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattatt |
10363921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 289
Target Start/End: Complemental strand, 13333307 - 13333046
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
13333307 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
13333208 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| ||| || | | | |||||| |||||| |||| ||||||||| |||| |||||||||| ||||| ||||| |
|
|
| T |
13333207 |
gtgttgtgatgatcaccctacttccttttttgccgttaatcagtggagttactaactcatcccaatcattataattgtcattccacaggtcatccaacac |
13333108 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| || ||||||||||||||||| | ||||||||||| |
|
|
| T |
13333107 |
taacaaaaatcttttatccctcaagtttttattcaattcaactcgaagaaaatcaagattat |
13333046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 334 - 506
Target Start/End: Complemental strand, 10260816 - 10260644
Alignment:
| Q |
334 |
actgattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcat |
433 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||| || || | ||||||||||||| ||||| | ||||| |
|
|
| T |
10260816 |
actgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacgccttcatgtcaaaatgttgttgaacttctttatcat |
10260717 |
T |
|
| Q |
434 |
tgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattatt |
506 |
Q |
| |
|
|||||||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| |||||| |
|
|
| T |
10260716 |
tgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattatt |
10260644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 369 - 509
Target Start/End: Original strand, 11160003 - 11160143
Alignment:
| Q |
369 |
atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacg |
468 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||||||| | || ||||||| ||| |||||||||||| |||||||| |||||||||||||| |
|
|
| T |
11160003 |
atcaaaatcctcagatacacaagcccatgctttgaaatcaaaatgatcttgaactttttcattattgtaaacaagttgtgcaagtgtcgttttaccgaca |
11160102 |
T |
|
| Q |
469 |
cctcccatacccacaattgcaacaacacctaaattattatt |
509 |
Q |
| |
|
||||||||||| | |||||||||||| |||| ||| ||||| |
|
|
| T |
11160103 |
cctcccatacctaaaattgcaacaacgcctatattgttatt |
11160143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 337 - 508
Target Start/End: Complemental strand, 10580716 - 10580545
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || | ||||||||||||| ||||| | |||||||| |
|
|
| T |
10580716 |
gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccacgccttcatgtcaaaatgttgttgaacttctttatcattgt |
10580617 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
10580616 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
10580545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 337 - 506
Target Start/End: Complemental strand, 10088905 - 10088736
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || ||||||||||| |||| ||||| | |||||||| |
|
|
| T |
10088905 |
gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcattgt |
10088806 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattatt |
506 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| || | ||||||||||||||||| |||||| |
|
|
| T |
10088805 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattatt |
10088736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 337 - 506
Target Start/End: Complemental strand, 10195788 - 10195619
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || ||||||||||| |||| ||||| | |||||||| |
|
|
| T |
10195788 |
gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcattgt |
10195689 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattatt |
506 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| || | ||||||||||||||||| |||||| |
|
|
| T |
10195688 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattatt |
10195619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 369 - 497
Target Start/End: Complemental strand, 10889389 - 10889261
Alignment:
| Q |
369 |
atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacg |
468 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||| |||||| || | || ||||||| |||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
10889389 |
atcaaaatcctcagatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgaca |
10889290 |
T |
|
| Q |
469 |
cctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
||||||||||| | ||||||||||||||| |
|
|
| T |
10889289 |
cctcccatacctaaaattgcaacaacacc |
10889261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 337 - 508
Target Start/End: Complemental strand, 9838976 - 9838805
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| | || ||||||||||||||| |||||| |||| || | | |||||||||||||| ||||| | ||||||||| |
|
|
| T |
9838976 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgt |
9838877 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| ||| |||| |
|
|
| T |
9838876 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
9838805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 337 - 508
Target Start/End: Complemental strand, 9849854 - 9849683
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| | || ||||||||||||||| |||||| |||| || | | |||||||||||||| ||||| | ||||||||| |
|
|
| T |
9849854 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgt |
9849755 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| ||| |||| |
|
|
| T |
9849754 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
9849683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 25 - 296
Target Start/End: Complemental strand, 13161386 - 13161115
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
13161386 |
ccaaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgtt |
13161287 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | |
|
|
| T |
13161286 |
ggcgtgttgtgatgatcaccctacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccag |
13161187 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttc |
296 |
Q |
| |
|
||| |||||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
13161186 |
cactaacaaaaatcttttatccctcaagtttttattcaactcaactcgaagagaatcaagattattgctttc |
13161115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 289
Target Start/End: Complemental strand, 13171434 - 13171173
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
13171434 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
13171335 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
13171334 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
13171235 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||| |
|
|
| T |
13171234 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattat |
13171173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 289
Target Start/End: Complemental strand, 13344492 - 13344231
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
13344492 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
13344393 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
13344392 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
13344293 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||| |
|
|
| T |
13344292 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattat |
13344231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 369 - 497
Target Start/End: Complemental strand, 8861369 - 8861241
Alignment:
| Q |
369 |
atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacg |
468 |
Q |
| |
|
|||||||||||| ||||||||| |||| ||||||| |||||| || | || ||||||| |||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
8861369 |
atcaaaatcctctgatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgaca |
8861270 |
T |
|
| Q |
469 |
cctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
||||||||||| | ||||||||||||||| |
|
|
| T |
8861269 |
cctcccatacctaaaattgcaacaacacc |
8861241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 337 - 497
Target Start/End: Original strand, 11130980 - 11131140
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||| || |||||||| | || |||||||||||| ||||||||| |||| ||||||| |||||| |||| || ||||||| ||||||||| |
|
|
| T |
11130980 |
gattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcattgt |
11131079 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
|| ||| ||||||||||| ||||| ||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
11131080 |
aagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacacc |
11131140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 337 - 497
Target Start/End: Original strand, 11148808 - 11148968
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||| || |||||||| | || |||||||||||| ||||||||| |||| ||||||| |||||| |||| || ||||||| ||||||||| |
|
|
| T |
11148808 |
gattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcattgt |
11148907 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
|| ||| ||||||||||| ||||| ||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
11148908 |
aagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacacc |
11148968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 337 - 508
Target Start/End: Complemental strand, 11769349 - 11769178
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
||||||||||||||| |||||||||| |||| ||||||||||||||| || ||| |||| || || |||||||||| ||||| ||||| | |||||||| |
|
|
| T |
11769349 |
gattcaaggagagacctggttactctcataatatcaaaatcctcagacacgcaagcccatgccttcaaatcaaaatattgttgaacttctttatcattgt |
11769250 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
| ||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
11769249 |
agacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
11769178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 25 - 296
Target Start/End: Complemental strand, 13290071 - 13289800
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
13290071 |
ccaaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgtt |
13289972 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | |
|
|
| T |
13289971 |
ggcgtgttgtgatgatcaccctacttcctgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccag |
13289872 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttc |
296 |
Q |
| |
|
||| |||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||||| |||||| |
|
|
| T |
13289871 |
caccaacaaaaatcttttatccctcaagttttgattcagttcaactcgaagagaatcaagattattgctttc |
13289800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 337 - 499
Target Start/End: Complemental strand, 10184357 - 10184195
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||| || |||||| |||| || | | |||||||||||||| ||||| | |||||||| |
|
|
| T |
10184357 |
gattcaaggagagacttggttactctcataatatcaaaatcctcggacacacaagcccacgccctcatatcaaaatgttgttgaacttctttatcattgt |
10184258 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacaccta |
499 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| |
|
|
| T |
10184257 |
aaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta |
10184195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 337 - 508
Target Start/End: Complemental strand, 10077384 - 10077213
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||| || | ||||||||||| | | |||||| |||||||| |
|
|
| T |
10077384 |
gattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccatgcctgcaaatcaaaatggtatcgaactttataatcattgt |
10077285 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
10077284 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatcttattat |
10077213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 337 - 508
Target Start/End: Original strand, 10433998 - 10434169
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
|||||||||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||| || ||||||||||| |||| ||||| | |||||||| |
|
|
| T |
10433998 |
gattcaaggagagacttggttactttcaaaatatcaaaatcctgagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgt |
10434097 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| || | ||||||||||||||||| ||||||| |
|
|
| T |
10434098 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattat |
10434169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 300
Target Start/End: Original strand, 11130689 - 11130964
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
11130689 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
11130788 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | ||| |||| || ||| ||||||||| |||| |||||||| | ||||| || |
|
|
| T |
11130789 |
ggcgtgttgtgacgatgaccctgcttccattgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccataggtcatccaa |
11130888 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||| || ||||| | || |||| |||||||||||| | ||||||||||| | |||||||| |
|
|
| T |
11130889 |
cacaaacaaaaatcttttgtctctcaaagttttcttcagttcaactcgaagaaaatcaagattattgttttcccaa |
11130964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 300
Target Start/End: Original strand, 11148517 - 11148792
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
11148517 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
11148616 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | || |||| || ||| ||||||||| |||| |||||||| || ||||| || |
|
|
| T |
11148617 |
ggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggtgttacaagttcatcccaatcattataattgtcattccataagtcatccaa |
11148716 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||| | ||||| | || |||| |||||||||||| | ||||||||||| | |||||||| |
|
|
| T |
11148717 |
cacaaacaaaaatcttttggctctcaaagttttcttcagttcaactcgaagaaaatcaagattattgttttcccaa |
11148792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 300
Target Start/End: Original strand, 11159680 - 11159955
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
11159680 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
11159779 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | ||| |||| || ||| ||||||||| |||| |||||||| | ||||| || |
|
|
| T |
11159780 |
ggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccaaaggtcatccaa |
11159879 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||| || ||||| | || || | |||||||||||| | ||||||||||| | |||||||| |
|
|
| T |
11159880 |
cacaaacaaaaatcttttgtcgctcaaagttttctttagttcaactcgaagaaaatcaagattattggtttcccaa |
11159955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 300
Target Start/End: Complemental strand, 8861692 - 8861417
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
8861692 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
8861593 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | ||| |||| || ||| ||| ||||| |||| |||||||| | ||||| || |
|
|
| T |
8861592 |
ggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccactcattataattgtcattccataggtcatccaa |
8861493 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||| || ||||| | || || | |||||||||||| | ||||||||||| | |||||||| |
|
|
| T |
8861492 |
cacaaacaaaaatcttttgtctctcaatgttttctttagttcaactcgaagaaaatcaagattattgttttcccaa |
8861417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 300
Target Start/End: Complemental strand, 10889712 - 10889437
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||| | ||||| || ||||||||||||||||| | |
|
|
| T |
10889712 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttgtgaataggatacgtgtgtgcaacctctgcaactttttgct |
10889613 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| || | ||| ||||| ||||||| | | | ||| |||| || ||| ||||||||| |||| |||||||| | ||||| || |
|
|
| T |
10889612 |
ggcgtgttgtgatgacgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccataggtcatccaa |
10889513 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa |
300 |
Q |
| |
|
|||||||||||||||||| || ||||| | || || | |||||||||||| | ||| ||||||| | |||||||| |
|
|
| T |
10889512 |
cacaaacaaaaatcttttgtctctcaaagttttctttagttcaactcgaagaaaatctagattattgttttcccaa |
10889437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 355 - 497
Target Start/End: Complemental strand, 13161077 - 13160935
Alignment:
| Q |
355 |
gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | |||||| |||| ||| || ||||| | |
|
|
| T |
13161077 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13160978 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| ||||| |
|
|
| T |
13160977 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13160935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 355 - 497
Target Start/End: Complemental strand, 13171128 - 13170986
Alignment:
| Q |
355 |
gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | |||||| |||| ||| || ||||| | |
|
|
| T |
13171128 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13171029 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| ||||| |
|
|
| T |
13171028 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13170986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 355 - 497
Target Start/End: Complemental strand, 13333001 - 13332859
Alignment:
| Q |
355 |
gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | |||||| |||| ||| || ||||| | |
|
|
| T |
13333001 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13332902 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| ||||| |
|
|
| T |
13332901 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13332859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 497
Target Start/End: Complemental strand, 13344168 - 13344044
Alignment:
| Q |
373 |
aaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctc |
472 |
Q |
| |
|
|||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | |||||| |||| ||| || ||||| || ||||| || || || | |
|
|
| T |
13344168 |
aaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgc |
13344069 |
T |
|
| Q |
473 |
ccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
||||||||| ||||||||| ||||| |
|
|
| T |
13344068 |
ccatacccaaaattgcaaccacacc |
13344044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 497
Target Start/End: Complemental strand, 13289762 - 13289620
Alignment:
| Q |
355 |
gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | |||||| |||| ||| || ||||| | |
|
|
| T |
13289762 |
gttactctcaaaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13289663 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
| ||||| || || || |||||||||| |||||| || ||||| |
|
|
| T |
13289662 |
tggttttgccaacaccgcccatacccaaaattgcgaccacacc |
13289620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 25 - 521
Target Start/End: Original strand, 17852586 - 17853082
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || ||||| ||||||||||| ||||||| |||| ||||||||||| |||||| ||||||||| | || ||||| |||||||||| | |
|
|
| T |
17852586 |
ccaaatgcatgctttgagagcaaagaccaacaatcttcatcggatataggttctaatttatgaattggaaatgtgcgtgcaacctccgcaacttttttta |
17852685 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| |||||||| || ||| ||||| | |||||| | | | ||| ||||||||||| ||||||| ||||| |||||||| || || || || |
|
|
| T |
17852686 |
ggcgtgttgttatgatgaccttgcttccagcttttcccttaaacaagggagttactagctcactccaatcaacgtaattgtcattccataagtcgtccaa |
17852785 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgta |
324 |
Q |
| |
|
|||||||||||||||| | ||| |||| | || | ||||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||| |
|
|
| T |
17852786 |
cacaaacaaaaatcttctatccatcaattgtttcattaattcaactcggaggatatcaagattatcgctttcccagacctttgaagcagcaaatgttgta |
17852885 |
T |
|
| Q |
325 |
tttctaacaactgattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaactt |
424 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| | |||||||||||| || |||||||||||||||||||||| ||||||||| |||||||| | |
|
|
| T |
17852886 |
tttctaacaacagattcaaggagagacttggttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaacct |
17852985 |
T |
|
| Q |
425 |
ttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgcc |
521 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||| |||||| |||| ||||| |
|
|
| T |
17852986 |
tttcatcattgtaaacaagctgtgcaagggtcgttttaccgacacctcccatccccaatattgcaacaacacctaaattgttatttatgctggtgcc |
17853082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 159; Significance: 2e-84; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 25 - 515
Target Start/End: Complemental strand, 11485444 - 11484954
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| | || |||||||||||||| | || |
|
|
| T |
11485444 |
ccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcgacctctgcaactttctctt |
11485345 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
||| |||||||| |||||| ||| | | || ||||| | | | ||| ||| || | | ||||||| |||| || ||||| | || || || |
|
|
| T |
11485344 |
cgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaa |
11485245 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgta |
324 |
Q |
| |
|
||||||||||| |||| | ||| |||| | ||| | ||||||||| |||||||||||||||||| ||||||||| || ||||| | || ||||| |
|
|
| T |
11485244 |
cacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttcccagacttttgaattgacagacgttgtg |
11485145 |
T |
|
| Q |
325 |
tttctaacaactgattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaactt |
424 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||| || | ||||| |||||||| |||||||||||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
11485144 |
tttctaacaacagattcaaggagggacttggttatcctcacgacatcgaaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactt |
11485045 |
T |
|
| Q |
425 |
ttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgct |
515 |
Q |
| |
|
|| |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
11485044 |
tttcatcgttgtaaacaagttgtgcaagggtcgttttaccgacgcctcccataaccaaaattgcaacaacacctaaattattatatctgct |
11484954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 223 - 520
Target Start/End: Original strand, 44957549 - 44957846
Alignment:
| Q |
223 |
aacacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttg |
322 |
Q |
| |
|
|||||||||||||||||| | ||| |||| | || | ||||||||| |||||||||||||||||||||||||||| || ||||| | | |||||| |
|
|
| T |
44957549 |
aacacaaacaaaaatcttctatccatcaaatgtttcattaattcaacttgaaggatatcaagattatcgctttcccacacatttgaatcgacatatgttg |
44957648 |
T |
|
| Q |
323 |
tatttctaacaactgattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaac |
422 |
Q |
| |
|
| ||||||||||| ||||||| |||||||| |||| ||||| ||||| |||||||| |||||||| | ||| ||||||| ||| |||||||||||||| |
|
|
| T |
44957649 |
tttttctaacaacacattcaagaagagactttgttattctaacaacattgaaatcctctgatacacatatccatgctttgagatcgaaatgttgttcaac |
44957748 |
T |
|
| Q |
423 |
ttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgc |
520 |
Q |
| |
|
|||| ||||||||||||||| ||||| || |||||||||||||| ||||||||||| | | ||||||||||||||||||||||||||||| |||| |
|
|
| T |
44957749 |
ttttatatcattgtaaacaagttgtgcgagagtcgttttaccgacacctcccatacctaaggtggcaacaacacctaaattattatttctgctggtgc |
44957846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 44957352 - 44957463
Alignment:
| Q |
26 |
caaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttg |
125 |
Q |
| |
|
|||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||||||| || ||||||||||| ||||||| |
|
|
| T |
44957352 |
caaatgcatgctttgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaatcggaaatgtgtgtgcaacctctgcaacgttttgttc |
44957451 |
T |
|
| Q |
126 |
gcgcgttgttat |
137 |
Q |
| |
|
|| |||||||| |
|
|
| T |
44957452 |
acgtgttgttat |
44957463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 106; Significance: 9e-53; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 28 - 289
Target Start/End: Complemental strand, 26907300 - 26907039
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
26907300 |
aatgcatgctttgagagtaaagaccaacaatcttcagttgatagaggttctaatttatgtataggaaatgtatgtgccacctctgcaactttttgttggc |
26907201 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| | ||| |||||||| || || ||||||| | |||| || ||||||| ||||| ||||| |
|
|
| T |
26907200 |
gcgttgttataatcaccatgcttccaggttttccatgaatgaagggacttacaagttcttcccaatcactataattgtcgttccacaggtcatccaacac |
26907101 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
||||||||||||||||||||| |||| || | || ||||||||||||| ||||||||||| |
|
|
| T |
26907100 |
aaacaaaaatcttttctcccttgagtttttccttaactcaactcgaaggacatcaagattat |
26907039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 337 - 508
Target Start/End: Complemental strand, 26907012 - 26906841
Alignment:
| Q |
337 |
gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
436 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| ||||||||||||||| ||||||||||| || || ||||||||||| ||| ||||| | |||||||| |
|
|
| T |
26907012 |
gattcaaggagagatttggttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgccgttgaacttctttatcattgt |
26906913 |
T |
|
| Q |
437 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat |
508 |
Q |
| |
|
||| ||| || |||||||| ||||| || | |||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
26906912 |
aaagaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
26906841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 74; Significance: 1e-33; HSPs: 5)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 289
Target Start/End: Original strand, 135554 - 135815
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
135554 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
135653 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
135654 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
135753 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||| |
|
|
| T |
135754 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattat |
135815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 289
Target Start/End: Original strand, 145605 - 145866
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
145605 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
145704 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
145705 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
145804 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||| |
|
|
| T |
145805 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattat |
145866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 153910 - 154026
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
153910 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
154009 |
T |
|
| Q |
128 |
gcgttgttataatcacc |
144 |
Q |
| |
|
| ||||| || |||||| |
|
|
| T |
154010 |
gtgttgtgatgatcacc |
154026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 355 - 497
Target Start/End: Original strand, 135860 - 136002
Alignment:
| Q |
355 |
gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | |||||| |||| ||| || ||||| | |
|
|
| T |
135860 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
135959 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| ||||| |
|
|
| T |
135960 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
136002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 355 - 497
Target Start/End: Original strand, 145911 - 146053
Alignment:
| Q |
355 |
gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg |
454 |
Q |
| |
|
|||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| | |||||| |||| ||| || ||||| | |
|
|
| T |
145911 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
146010 |
T |
|
| Q |
455 |
tcgttttaccgacgcctcccatacccacaattgcaacaacacc |
497 |
Q |
| |
|
| ||||| || || || |||||||||| ||||||||| ||||| |
|
|
| T |
146011 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
146053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 25 - 297
Target Start/End: Original strand, 31679396 - 31679668
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| || || |||| |||||||||||||||| || |||||||| || || | | ||| |||||||||| || |
|
|
| T |
31679396 |
ccaaatgcatgctttgagagtaaagaccagcaatcatcatctgatagaggttctaatttatagataggaaaggtatgggtgaactcggcaactttttatt |
31679495 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
| || ||||| ||||||||| |||||| | || ||||||| ||| ||| | ||||| | | |||||||||| || ||||||||||| ||||| || |
|
|
| T |
31679496 |
gacgtgttgtgataatcaccctacttccagattctccatcaatgaagggagtgactagatgatgccaatcattatagctatcattccacatgtcatccaa |
31679595 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcc |
297 |
Q |
| |
|
|||||||||||||||||| || ||||||| | || |||| |||||||| | |||||||||||| |||||| |
|
|
| T |
31679596 |
cacaaacaaaaatctttttcccttcaagttttgctttaatttgactcgaagaaaatcaagattatcactttcc |
31679668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 509
Target Start/End: Complemental strand, 29836756 - 29836586
Alignment:
| Q |
339 |
ttcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaa |
438 |
Q |
| |
|
|||||||||||| ||||||||||| | | ||||||||| ||||| |||||||||||| ||| | ||||||||| | || ||||| | | | ||||| |
|
|
| T |
29836756 |
ttcaaggagagatttggttactctcaacatatcaaaatcttcagacacacaaacccagacttgtacatcaaaatgatttttaacttcttcctggttgtat |
29836657 |
T |
|
| Q |
439 |
acaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatt |
509 |
Q |
| |
|
| ||| | || |||||||||||||||| |||||||| || |||||| || ||||||| ||||||||| |
|
|
| T |
29836656 |
ataagtcgagcgagggtcgttttaccgatacctcccatgcctgtaattgcgactacacctatattattatt |
29836586 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 473
Target Start/End: Complemental strand, 825991 - 825887
Alignment:
| Q |
369 |
atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacg |
468 |
Q |
| |
|
|||||||||||| | |||||||||||| |||| ||||||||||| | |||||||| ||||||||||||||| | ||||| |||| |||||| || |
|
|
| T |
825991 |
atcaaaatcctcggtgacacaaacccagactttcaaatcaaaatgctcatcaactttcttatcattgtaaacaagtcgagcaagtgtcgatttaccaaca |
825892 |
T |
|
| Q |
469 |
cctcc |
473 |
Q |
| |
|
||||| |
|
|
| T |
825891 |
cctcc |
825887 |
T |
|
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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 826317 - 826225
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaact |
117 |
Q |
| |
|
|||||||||| || ||||||||||||||||| | ||| | ||||||||||| |||| |||||||||| | || || || |||||||||||| |
|
|
| T |
826317 |
ccaaatgcatacttggagagtaaagaccaacaatgttcgtccgatagaggttccaatttatgaataggatacgtatgtgcaacctctgcaact |
826225 |
T |
|
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