View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20486_high_41 (Length: 216)
Name: NF20486_high_41
Description: NF20486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20486_high_41 |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 41078063 - 41078261
Alignment:
| Q |
8 |
ttatgtgtattttcttagagattcattaagctaggactttatcctattagtttatgcttagaaaagtttgattgtaatattgatttttgtataggatttg |
107 |
Q |
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| T |
41078063 |
ttatgtgtattttcttagagattcattaagctaggactttatcctattagttt-tgcttagaaaagtttgattgtaatattgatttttgtataggatttg |
41078161 |
T |
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| Q |
108 |
atgtacgacattggttactttgaacatcacatgatatattattattatttgttccaaagatttaattttctgttctcaaaaaatatatttaaagtattat |
207 |
Q |
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| T |
41078162 |
atgtacgacattggttactttgaacatcatttgatatattattattatttgttccaaagatttaattttctgttctcaaaaaatatatttaaagtattat |
41078261 |
T |
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