View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20486_low_21 (Length: 292)
Name: NF20486_low_21
Description: NF20486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20486_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 33 - 278
Target Start/End: Complemental strand, 36396990 - 36396740
Alignment:
| Q |
33 |
atatcgatgactcaaattctctgttactccgaaatccaaattatata---ctgatttagttttttaatataataataccaactacttgatctataacatg |
129 |
Q |
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| T |
36396990 |
atatcgttgactcaaattctttgttactccgaaatccaaattatatagtactgatttagttttttaatataataataccaactacttgatctataacgtg |
36396891 |
T |
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| Q |
130 |
ttgactaattga--gcaaaattccttgagtgttgggaatccatttgacccagtcacacccaaaattacataaaagatcataattgtaatattgcaacttg |
227 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36396890 |
ttgactaattgactgcaaaattccttgagtgttgggaatccatttgacccagtcacacccaaaattacataaaagatcataattgtaatattgcaacttg |
36396791 |
T |
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| Q |
228 |
caaaatttgggagtagacccactcaatttaaaatgacattaatcatgcata |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36396790 |
caaaatttgggagtagacccactcaatttaaaatgacattaatcatgcata |
36396740 |
T |
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