View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20488_low_14 (Length: 241)
Name: NF20488_low_14
Description: NF20488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20488_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 46845205 - 46845433
Alignment:
| Q |
1 |
aattattaactttgtgtcagtcactgattctgggagtgcagtattgcaaagtgttcaacaatttgcgtacgtgttgcaatcaaaccaatgtaccagatcc |
100 |
Q |
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| T |
46845205 |
aattattaactttgtgtcagtcactgattctgggagtgcactattgcaaagtgttcaacaatttgcgtacgtgttgcaatcaaaccaatgtaccagatcc |
46845304 |
T |
|
| Q |
101 |
aatgcaccttattattatttagaaataataatataataaagaaaaagaagcctaacccacctgcccttaatcccatggttttattatattgagtcacaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46845305 |
aatgcaccttattattatttagaaataataatataataaagaaaaagaagcctaacccacctgcccttaatcccatggttttattatattgagtcacaca |
46845404 |
T |
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| Q |
201 |
cttcatgctccttccttctctattccctt |
229 |
Q |
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||||||||||||||||||||| ||||||| |
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| T |
46845405 |
cttcatgctccttccttctctcttccctt |
46845433 |
T |
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