View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2048_low_10 (Length: 252)
Name: NF2048_low_10
Description: NF2048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2048_low_10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 86 - 252
Target Start/End: Original strand, 30777771 - 30777941
Alignment:
| Q |
86 |
atctttttatttcccacacacnnnnnnnnggccaaaaatttcattccactttca----tttgtcgcgacaaaaaaccccaatccttcttaatttcaatct |
181 |
Q |
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| T |
30777771 |
atctttttatttcccacacacttttttttggccaaaaatttcattccactttcattcatttgtcgcgacaaaaaaccccaatccttcttaatttcaatct |
30777870 |
T |
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| Q |
182 |
tacattcgaaaacctcaaaatcagttctttcatcttcccaaagtcatgtatttcttccctaaaacataatc |
252 |
Q |
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| T |
30777871 |
ttcattcgaaaacctcaaaatcagttctttcatcttcccaaagtcatgtatttcttccctaaaacataatc |
30777941 |
T |
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