View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20491_low_5 (Length: 359)

Name: NF20491_low_5
Description: NF20491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20491_low_5
NF20491_low_5
[»] chr2 (60 HSPs)
chr2 (29-330)||(18054916-18055217)
chr2 (29-196)||(43495488-43495656)
chr2 (29-196)||(15321394-15321562)
chr2 (147-196)||(6171158-6171207)
chr2 (147-196)||(17346037-17346086)
chr2 (145-196)||(11883625-11883677)
chr2 (145-196)||(11883926-11883978)
chr2 (145-196)||(24832333-24832385)
chr2 (145-196)||(7980003-7980054)
chr2 (145-196)||(26737484-26737534)
chr2 (145-195)||(40469729-40469780)
chr2 (143-196)||(20347165-20347219)
chr2 (143-196)||(26737779-26737833)
chr2 (145-195)||(32673143-32673193)
chr2 (147-196)||(40221315-40221364)
chr2 (145-196)||(2639482-2639534)
chr2 (145-196)||(18296693-18296745)
chr2 (145-196)||(20347464-20347516)
chr2 (145-196)||(26841589-26841641)
chr2 (145-196)||(30190925-30190977)
chr2 (145-196)||(40469429-40469481)
chr2 (145-195)||(15920781-15920832)
chr2 (143-196)||(6171454-6171508)
chr2 (33-107)||(6495517-6495591)
chr2 (145-195)||(17345736-17345785)
chr2 (145-196)||(2638822-2638874)
chr2 (145-196)||(18296078-18296130)
chr2 (145-196)||(26842238-26842290)
chr2 (145-196)||(30191225-30191277)
chr2 (145-195)||(7591204-7591255)
chr2 (32-83)||(17345851-17345902)
chr2 (145-195)||(18055316-18055367)
chr2 (145-195)||(26692820-26692871)
chr2 (202-257)||(36190078-36190133)
chr2 (30-77)||(41790917-41790963)
chr2 (145-195)||(43495484-43495535)
chr2 (147-196)||(6495723-6495773)
chr2 (29-79)||(8851149-8851198)
chr2 (29-83)||(11883743-11883797)
chr2 (202-252)||(23683725-23683775)
chr2 (29-75)||(26737660-26737706)
chr2 (147-196)||(29230284-29230334)
chr2 (29-83)||(32673023-32673077)
chr2 (29-83)||(40221492-40221546)
chr2 (202-268)||(44132579-44132645)
chr2 (146-193)||(26737657-26737706)
chr2 (147-195)||(29343584-29343633)
chr2 (152-196)||(43495311-43495356)
chr2 (202-267)||(45314424-45314489)
chr2 (145-196)||(5378663-5378715)
chr2 (29-77)||(5378664-5378711)
chr2 (145-196)||(17850980-17851032)
chr2 (29-77)||(17850981-17851028)
chr2 (29-77)||(20347468-20347515)
chr2 (29-77)||(30190926-30190973)
chr2 (145-196)||(37720206-37720258)
chr2 (29-77)||(37720207-37720254)
chr2 (144-172)||(40221487-40221515)
chr2 (147-193)||(40469607-40469655)
chr2 (145-196)||(41790912-41790964)
[»] chr6 (33 HSPs)
chr6 (29-196)||(21031981-21032151)
chr6 (32-196)||(31598157-31598324)
chr6 (29-129)||(33658513-33658614)
chr6 (32-131)||(31598641-31598741)
chr6 (29-131)||(23250774-23250875)
chr6 (143-196)||(10039678-10039731)
chr6 (145-195)||(3825530-3825580)
chr6 (145-196)||(3403719-3403771)
chr6 (145-196)||(3403989-3404041)
chr6 (145-196)||(11656782-11656834)
chr6 (145-196)||(13579651-13579702)
chr6 (149-196)||(30388064-30388111)
chr6 (149-195)||(31598732-31598778)
chr6 (145-196)||(18241856-18241908)
chr6 (145-185)||(30388362-30388402)
chr6 (145-196)||(33828992-33829044)
chr6 (145-196)||(33829636-33829688)
chr6 (145-196)||(33655115-33655166)
chr6 (29-83)||(2762603-2762657)
chr6 (29-83)||(10039847-10039901)
chr6 (197-258)||(9443474-9443535)
chr6 (150-196)||(21032285-21032332)
chr6 (145-196)||(33971996-33972047)
chr6 (145-193)||(2762611-2762661)
chr6 (29-83)||(3403869-3403923)
chr6 (145-193)||(10039843-10039893)
chr6 (29-83)||(11656600-11656654)
chr6 (29-83)||(13579532-13579586)
chr6 (29-83)||(30388244-30388298)
chr6 (29-79)||(32734000-32734049)
chr6 (149-193)||(12714436-12714481)
chr6 (203-268)||(20858400-20858465)
chr6 (145-177)||(18242156-18242188)
[»] chr3 (51 HSPs)
chr3 (30-196)||(47871005-47871173)
chr3 (29-196)||(17372477-17372644)
chr3 (29-131)||(14015874-14015977)
chr3 (29-116)||(45060776-45060862)
chr3 (29-105)||(13657625-13657701)
chr3 (31-129)||(17440830-17440929)
chr3 (143-196)||(42627544-42627597)
chr3 (29-129)||(4947333-4947432)
chr3 (145-195)||(14015964-14016014)
chr3 (144-196)||(20969018-20969071)
chr3 (144-196)||(9027032-9027084)
chr3 (145-196)||(10293909-10293961)
chr3 (145-196)||(17372300-17372352)
chr3 (146-193)||(18874887-18874935)
chr3 (145-196)||(18875191-18875243)
chr3 (29-195)||(9026739-9026906)
chr3 (29-131)||(26540639-26540740)
chr3 (145-196)||(42672980-42673031)
chr3 (146-196)||(45060872-45060923)
chr3 (29-83)||(1101094-1101147)
chr3 (202-268)||(4045650-4045716)
chr3 (29-83)||(18875009-18875063)
chr3 (29-83)||(20968900-20968954)
chr3 (148-196)||(17441066-17441115)
chr3 (143-195)||(23630033-23630086)
chr3 (144-196)||(47870825-47870878)
chr3 (145-195)||(3644720-3644772)
chr3 (145-196)||(20968720-20968772)
chr3 (145-196)||(40848961-40849013)
chr3 (145-196)||(3353130-3353181)
chr3 (145-196)||(24485460-24485511)
chr3 (152-191)||(26540876-26540915)
chr3 (145-195)||(27238900-27238951)
chr3 (145-196)||(40848523-40848574)
chr3 (145-196)||(42673296-42673347)
chr3 (145-195)||(1928434-1928484)
chr3 (226-268)||(3461764-3461806)
chr3 (146-195)||(3644538-3644588)
chr3 (29-83)||(3644724-3644778)
chr3 (146-196)||(8315083-8315133)
chr3 (151-196)||(45060598-45060644)
chr3 (146-194)||(4947263-4947312)
chr3 (147-191)||(3353553-3353597)
chr3 (145-196)||(3644783-3644835)
chr3 (145-196)||(10348799-10348851)
chr3 (147-193)||(18875017-18875065)
chr3 (197-257)||(19137643-19137703)
chr3 (29-77)||(20969023-20969070)
chr3 (148-196)||(28702280-28702328)
chr3 (145-196)||(48159899-48159951)
chr3 (29-77)||(48159900-48159947)
[»] chr4 (58 HSPs)
chr4 (31-129)||(24775592-24775690)
chr4 (30-185)||(54509002-54509155)
chr4 (29-131)||(8181939-8182042)
chr4 (29-185)||(39415407-39415564)
chr4 (145-196)||(3930480-3930531)
chr4 (29-131)||(49178587-49178690)
chr4 (29-101)||(7603297-7603369)
chr4 (145-196)||(16555817-16555869)
chr4 (145-196)||(35393776-35393827)
chr4 (147-195)||(47219203-47219252)
chr4 (145-196)||(13198906-13198958)
chr4 (145-196)||(16555517-16555569)
chr4 (145-196)||(18077202-18077254)
chr4 (145-196)||(24775783-24775835)
chr4 (145-196)||(50678781-50678833)
chr4 (145-196)||(56505695-56505747)
chr4 (145-196)||(8488482-8488533)
chr4 (145-196)||(11241661-11241712)
chr4 (145-195)||(13198606-13198657)
chr4 (145-196)||(22681577-22681628)
chr4 (145-196)||(27304720-27304770)
chr4 (145-195)||(36096475-36096526)
chr4 (147-196)||(22681881-22681931)
chr4 (145-194)||(49178816-49178866)
chr4 (29-77)||(28196349-28196396)
chr4 (145-196)||(36095819-36095871)
chr4 (145-196)||(50679424-50679476)
chr4 (145-196)||(3930181-3930232)
chr4 (145-196)||(7603147-7603197)
chr4 (197-271)||(18497401-18497476)
chr4 (145-196)||(26207363-26207414)
chr4 (146-177)||(39415246-39415277)
chr4 (29-83)||(8488304-8488358)
chr4 (145-193)||(27304893-27304943)
chr4 (29-83)||(35393596-35393650)
chr4 (145-196)||(8181993-8182046)
chr4 (145-196)||(8182172-8182225)
chr4 (99-176)||(8488211-8488287)
chr4 (145-196)||(4239366-4239418)
chr4 (29-77)||(4239370-4239417)
chr4 (145-196)||(5205990-5206042)
chr4 (148-196)||(7603422-7603470)
chr4 (145-196)||(9023246-9023298)
chr4 (29-77)||(9380745-9380792)
chr4 (149-196)||(11241391-11241439)
chr4 (145-196)||(11529170-11529222)
chr4 (147-193)||(16555695-16555743)
chr4 (145-196)||(25161880-25161932)
chr4 (29-77)||(25161881-25161928)
chr4 (145-196)||(28196348-28196400)
chr4 (145-196)||(28196773-28196825)
chr4 (29-77)||(28196777-28196824)
chr4 (29-77)||(32703228-32703275)
chr4 (145-196)||(32703650-32703702)
chr4 (29-77)||(32703654-32703701)
chr4 (145-196)||(43051252-43051304)
chr4 (143-193)||(49178644-49178696)
chr4 (29-77)||(56505696-56505743)
[»] chr1 (53 HSPs)
chr1 (29-195)||(31847898-31848067)
chr1 (29-196)||(46056905-46057067)
chr1 (145-196)||(13589659-13589710)
chr1 (29-196)||(1176719-1176886)
chr1 (145-196)||(17518602-17518653)
chr1 (145-196)||(41083211-41083262)
chr1 (147-195)||(22149701-22149750)
chr1 (145-196)||(8108993-8109045)
chr1 (145-196)||(47955308-47955360)
chr1 (145-196)||(48190773-48190825)
chr1 (145-196)||(49284411-49284463)
chr1 (145-195)||(8108724-8108775)
chr1 (145-196)||(17518305-17518356)
chr1 (145-196)||(20371353-20371404)
chr1 (145-196)||(22149405-22149455)
chr1 (145-196)||(27172118-27172169)
chr1 (222-268)||(3140371-3140417)
chr1 (146-196)||(20480613-20480663)
chr1 (29-83)||(22149582-22149636)
chr1 (209-257)||(23336512-23336560)
chr1 (145-196)||(31848192-31848244)
chr1 (145-196)||(47955608-47955660)
chr1 (145-196)||(48191355-48191407)
chr1 (145-195)||(1177018-1177069)
chr1 (145-196)||(20480170-20480221)
chr1 (209-268)||(42801892-42801951)
chr1 (145-196)||(50615621-50615672)
chr1 (145-196)||(50623449-50623500)
chr1 (202-268)||(16182822-16182888)
chr1 (29-83)||(17518484-17518538)
chr1 (143-195)||(31848019-31848073)
chr1 (29-79)||(46823844-46823893)
chr1 (143-185)||(48313790-48313832)
chr1 (29-79)||(50430085-50430134)
chr1 (197-258)||(50575924-50575985)
chr1 (145-196)||(6002239-6002291)
chr1 (29-77)||(8108997-8109044)
chr1 (145-196)||(9347128-9347180)
chr1 (29-77)||(9347129-9347176)
chr1 (145-196)||(13918448-13918500)
chr1 (29-77)||(13918871-13918918)
chr1 (145-196)||(32163043-32163095)
chr1 (29-77)||(32163047-32163094)
chr1 (145-196)||(39692000-39692052)
chr1 (29-77)||(39692004-39692051)
chr1 (149-185)||(41082923-41082959)
chr1 (145-196)||(44911027-44911079)
chr1 (29-77)||(44911028-44911075)
chr1 (151-195)||(46057199-46057243)
chr1 (29-77)||(47955309-47955356)
chr1 (145-196)||(48105116-48105168)
chr1 (145-196)||(50526472-50526524)
chr1 (29-77)||(50526476-50526523)
[»] chr7 (63 HSPs)
chr7 (29-196)||(27096049-27096216)
chr7 (29-196)||(27182087-27182254)
chr7 (55-196)||(23686423-23686566)
chr7 (29-196)||(5735254-5735426)
chr7 (29-131)||(18925233-18925335)
chr7 (29-128)||(38191335-38191433)
chr7 (29-131)||(8953669-8953772)
chr7 (145-196)||(8953889-8953940)
chr7 (145-196)||(18925322-18925372)
chr7 (146-196)||(6908215-6908265)
chr7 (146-196)||(35079962-35080012)
chr7 (146-195)||(6908485-6908534)
chr7 (145-193)||(33628660-33628709)
chr7 (145-196)||(3687656-3687708)
chr7 (145-196)||(9412025-9412077)
chr7 (145-196)||(9412325-9412377)
chr7 (145-196)||(13772643-13772695)
chr7 (145-196)||(13772901-13772953)
chr7 (145-196)||(34235978-34236030)
chr7 (145-196)||(44599491-44599543)
chr7 (145-196)||(44600135-44600187)
chr7 (145-196)||(3687355-3687408)
chr7 (151-196)||(23686723-23686769)
chr7 (197-255)||(27039533-27039590)
chr7 (145-196)||(5349733-5349782)
chr7 (145-196)||(13863315-13863367)
chr7 (145-196)||(29292041-29292093)
chr7 (145-196)||(13744233-13744284)
chr7 (149-196)||(33628397-33628444)
chr7 (29-84)||(33628497-33628552)
chr7 (149-195)||(38191265-38191312)
chr7 (145-196)||(48359322-48359373)
chr7 (147-196)||(18925064-18925114)
chr7 (29-79)||(20418889-20418938)
chr7 (145-195)||(22740591-22740641)
chr7 (149-195)||(27096346-27096392)
chr7 (149-195)||(27181911-27181957)
chr7 (202-268)||(35498411-35498476)
chr7 (145-195)||(42419029-42419079)
chr7 (147-196)||(18864404-18864453)
chr7 (29-77)||(3687660-3687707)
chr7 (145-196)||(8643766-8643818)
chr7 (29-77)||(9034870-9034917)
chr7 (145-196)||(9035293-9035345)
chr7 (29-77)||(9035297-9035344)
chr7 (29-77)||(9412329-9412376)
chr7 (145-196)||(10533036-10533088)
chr7 (29-77)||(10533037-10533084)
chr7 (153-196)||(13863964-13864008)
chr7 (144-172)||(15567019-15567047)
chr7 (200-268)||(23799313-23799381)
chr7 (145-196)||(29291808-29291860)
chr7 (29-77)||(29292925-29292972)
chr7 (202-266)||(33236283-33236347)
chr7 (145-185)||(35080223-35080263)
chr7 (145-196)||(37888835-37888887)
chr7 (29-77)||(37888836-37888883)
chr7 (145-196)||(37889259-37889311)
chr7 (29-77)||(37889263-37889310)
chr7 (145-196)||(37972396-37972448)
chr7 (29-77)||(37972400-37972447)
chr7 (147-194)||(38191387-38191435)
chr7 (145-196)||(46816311-46816363)
[»] chr8 (54 HSPs)
chr8 (32-131)||(11007603-11007702)
chr8 (144-196)||(74688-74740)
chr8 (29-131)||(9930610-9930710)
chr8 (108-196)||(16929204-16929294)
chr8 (145-196)||(13936725-13936776)
chr8 (145-196)||(23123517-23123567)
chr8 (145-196)||(34313767-34313817)
chr8 (31-196)||(3463826-3463997)
chr8 (149-191)||(7127660-7127702)
chr8 (147-196)||(43162236-43162285)
chr8 (29-178)||(74865-75017)
chr8 (145-196)||(765736-765788)
chr8 (145-196)||(9823361-9823413)
chr8 (145-196)||(12281426-12281478)
chr8 (145-196)||(15155885-15155937)
chr8 (145-196)||(16928944-16928996)
chr8 (145-196)||(37752086-37752138)
chr8 (145-196)||(37752416-37752468)
chr8 (145-196)||(39724048-39724100)
chr8 (145-196)||(41662403-41662455)
chr8 (145-196)||(43245873-43245925)
chr8 (145-196)||(43246176-43246228)
chr8 (145-195)||(13027281-13027332)
chr8 (145-196)||(18020088-18020138)
chr8 (29-104)||(22786909-22786984)
chr8 (147-196)||(12281126-12281176)
chr8 (147-196)||(13026637-13026687)
chr8 (145-194)||(43162539-43162588)
chr8 (148-196)||(11007565-11007613)
chr8 (145-196)||(15156185-15156237)
chr8 (145-196)||(22851392-22851444)
chr8 (145-196)||(23123340-23123392)
chr8 (145-196)||(41662109-41662161)
chr8 (146-177)||(43598756-43598787)
chr8 (146-195)||(7127923-7127973)
chr8 (29-83)||(9465692-9465746)
chr8 (145-195)||(9465874-9465923)
chr8 (29-83)||(15156065-15156119)
chr8 (29-79)||(15444651-15444700)
chr8 (29-83)||(18019907-18019961)
chr8 (29-83)||(37752234-37752288)
chr8 (202-268)||(39432344-39432410)
chr8 (159-196)||(767720-767757)
chr8 (147-195)||(22786843-22786892)
chr8 (29-77)||(765737-765784)
chr8 (145-185)||(3463654-3463694)
chr8 (145-196)||(9822750-9822802)
chr8 (29-77)||(12281127-12281174)
chr8 (145-196)||(25438794-25438846)
chr8 (29-77)||(25438795-25438842)
chr8 (221-269)||(30500480-30500528)
chr8 (145-196)||(34498555-34498607)
chr8 (145-197)||(37670256-37670307)
chr8 (29-77)||(41662407-41662454)
[»] chr5 (53 HSPs)
chr5 (29-130)||(23011261-23011363)
chr5 (65-196)||(41383088-41383218)
chr5 (31-196)||(12441196-12441362)
chr5 (29-114)||(9869742-9869827)
chr5 (145-196)||(22428936-22428987)
chr5 (145-196)||(22429196-22429247)
chr5 (29-195)||(34576870-34577039)
chr5 (145-196)||(18433017-18433069)
chr5 (145-196)||(26020452-26020504)
chr5 (145-196)||(34577164-34577215)
chr5 (145-195)||(9665560-9665609)
chr5 (146-196)||(23011081-23011131)
chr5 (145-196)||(18433316-18433368)
chr5 (145-196)||(18817611-18817663)
chr5 (145-196)||(25116061-25116113)
chr5 (145-196)||(25175151-25175203)
chr5 (147-195)||(31569910-31569958)
chr5 (145-195)||(11351427-11351478)
chr5 (145-196)||(22729440-22729491)
chr5 (146-196)||(9665828-9665877)
chr5 (29-83)||(25115877-25115931)
chr5 (29-83)||(25174969-25175023)
chr5 (146-195)||(23011383-23011432)
chr5 (146-195)||(41382896-41382945)
chr5 (149-196)||(16466746-16466794)
chr5 (145-196)||(18816954-18817006)
chr5 (145-196)||(25115759-25115811)
chr5 (145-196)||(25174851-25174903)
chr5 (147-197)||(16726079-16726130)
chr5 (197-268)||(17557043-17557113)
chr5 (145-196)||(37610204-37610255)
chr5 (145-196)||(37780322-37780373)
chr5 (29-79)||(2817150-2817199)
chr5 (29-83)||(18433135-18433189)
chr5 (29-79)||(21207227-21207276)
chr5 (145-195)||(43463759-43463809)
chr5 (146-195)||(9869563-9869611)
chr5 (29-74)||(16726084-16726128)
chr5 (193-254)||(27278761-27278822)
chr5 (209-266)||(31292544-31292601)
chr5 (147-196)||(37610620-37610669)
chr5 (147-196)||(43464194-43464243)
chr5 (152-196)||(2817582-2817626)
chr5 (145-196)||(5187830-5187882)
chr5 (145-196)||(12498569-12498621)
chr5 (29-77)||(12498570-12498617)
chr5 (145-196)||(12498928-12498980)
chr5 (29-77)||(12498932-12498979)
chr5 (29-77)||(16466746-16466793)
chr5 (148-196)||(22729010-22729058)
chr5 (29-77)||(22729444-22729490)
chr5 (145-196)||(26571164-26571216)
chr5 (29-77)||(26571168-26571215)
[»] scaffold0001 (5 HSPs)
scaffold0001 (29-131)||(183544-183646)
scaffold0001 (145-196)||(438932-438984)
scaffold0001 (146-195)||(183367-183416)
scaffold0001 (149-196)||(439203-439251)
scaffold0001 (145-196)||(183663-183714)
[»] scaffold0319 (3 HSPs)
scaffold0319 (145-196)||(6697-6748)
scaffold0319 (145-196)||(6396-6448)
scaffold0319 (29-83)||(6577-6631)
[»] scaffold0035 (1 HSPs)
scaffold0035 (29-196)||(72968-73137)
[»] scaffold0110 (2 HSPs)
scaffold0110 (145-196)||(45807-45858)
scaffold0110 (148-196)||(45539-45587)
[»] scaffold0015 (2 HSPs)
scaffold0015 (147-196)||(17158-17207)
scaffold0015 (145-196)||(16855-16905)
[»] scaffold0328 (2 HSPs)
scaffold0328 (145-196)||(6154-6206)
scaffold0328 (145-196)||(6795-6847)
[»] scaffold0192 (2 HSPs)
scaffold0192 (145-196)||(25369-25421)
scaffold0192 (29-83)||(25249-25303)
[»] scaffold1221 (2 HSPs)
scaffold1221 (145-196)||(1513-1564)
scaffold1221 (147-195)||(1786-1834)
[»] scaffold0376 (2 HSPs)
scaffold0376 (145-196)||(7457-7508)
scaffold0376 (145-196)||(7600-7651)
[»] scaffold0009 (1 HSPs)
scaffold0009 (145-196)||(205689-205740)
[»] scaffold0802 (4 HSPs)
scaffold0802 (145-196)||(1120-1172)
scaffold0802 (145-196)||(1420-1472)
scaffold0802 (29-83)||(1300-1354)
scaffold0802 (29-77)||(1424-1471)
[»] scaffold0069 (1 HSPs)
scaffold0069 (145-196)||(50507-50558)
[»] scaffold0002 (2 HSPs)
scaffold0002 (145-196)||(411925-411976)
scaffold0002 (34-83)||(412041-412090)
[»] scaffold0460 (1 HSPs)
scaffold0460 (145-196)||(763-814)
[»] scaffold0598 (1 HSPs)
scaffold0598 (146-196)||(6877-6926)
[»] scaffold0535 (2 HSPs)
scaffold0535 (149-196)||(10014-10062)
scaffold0535 (29-77)||(10015-10062)
[»] scaffold0041 (2 HSPs)
scaffold0041 (145-196)||(38695-38747)
scaffold0041 (29-77)||(38699-38746)
[»] scaffold0017 (2 HSPs)
scaffold0017 (145-196)||(185274-185326)
scaffold0017 (29-77)||(185278-185325)


Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 29 - 330
Target Start/End: Complemental strand, 18055217 - 18054916
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18055217 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 18055118  T
Q  129 tcgttcnnnnnnnngagggg-tgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaagaaggagaataaatggggtgtctgaagtttga 227  Q
    ||| |         |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18055117 tcgctaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaag-tagggggaaaagtgcaattaagaaggagaataaatgggatgtctgaagtttga 18055019  T
Q  228 accacaacccttacatataacaatgcatgtctctgtcaactaagcacgaagactttaaacaccatcaattttcacttttgcacctcacccaaagacactc 327  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18055018 accacaacccctacatataacaatgcatgtctctatcaactaagcacgaagactttaaacaccatcaattttcacttttgcacctcacccaaagacattc 18054919  T
Q  328 tct 330  Q
    |||    
T  18054918 tct 18054916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 196
Target Start/End: Original strand, 43495488 - 43495656
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    |||||||||||||||||| |||||  |||||| | |||||||||||||||||||||||  |||||| ||||| ||||||  |||||| ||||||||||||    
T  43495488 tgcaaaatcgcacaattgacaaaaagataggggg-aaaagtgcaattaaacacaagaagttccatctaaccaaaaagggcgcaaaaagatggggtgcaaa 43495586  T
Q  128 atcgttcnnnnnnnngagggg-tgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||| ||        |||||| |||||||||||||||||||||||| ||||  || ||||||||||||||    
T  43495587 atcgctcaaaaaaaagaggggatgcaaaatcgcacaattagcaaaatataggtgggaaagtgcaattaag 43495656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 15321562 - 15321394
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    |||||||||||||| |||| ||||  ||||||  |||||||||||||||||| ||||| || |||| ||| ||||| ||| |||||| ||||||||||||    
T  15321562 tgcaaaatcgcacagttggaaaaag-ataggggacaaaagtgcaattaaacaaaagaaggttcatctaactagaaatggggcaaaaagatggggtgcaaa 15321464  T
Q  128 atcgttc-nnnnnnnngagggg-tgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||| ||          ||||| |||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  15321463 atcgctcaaaataaaataggggatgcaaaattgcacaattaacaaaagatag-gggaaaagtgcaattaag 15321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 6171207 - 6171158
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaag 6171158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 17346037 - 17346086
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  17346037 ggtgcaaaatcgcacaattagcaaaagataaaggaaaaagtgcaattaag 17346086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 11883677 - 11883625
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  11883677 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 11883625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 11883926 - 11883978
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  11883926 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 11883978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 24832385 - 24832333
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24832385 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 24832333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 7980003 - 7980054
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  7980003 ggggtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaag 7980054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 26737534 - 26737484
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  26737534 ggggtgcaaaatcgcacaattagcaaaagatag-gagaaaagtgcaattaag 26737484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 40469729 - 40469780
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaa 195  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  40469729 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 20347219 - 20347165
Alignment:
Q  143 gaggggtgcaaaatcgcacaattagcaaaagataga-gggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  20347219 gaggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaag 20347165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 26737779 - 26737833
Alignment:
Q  143 gaggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||||||||    
T  26737779 gaggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaag 26737833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 32673143 - 32673193
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  32673143 ggggtgcaaaatcgcacaattggcaaaagataggggaaaaagtgcaattaa 32673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 40221364 - 40221315
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagatagggggaaaggtgcaattaag 40221315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 2639482 - 2639534
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  2639482 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 2639534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 18296693 - 18296745
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  18296693 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 18296745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 20347464 - 20347516
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  20347464 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 20347516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 26841641 - 26841589
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  26841641 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 26841589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 30190977 - 30190925
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  30190977 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 30190925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 40469481 - 40469429
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  40469481 ggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaag 40469429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 15920832 - 15920781
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaa 195  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  15920832 ggggtgcaaaatcgcacaattaacaaaagataggagggaaaagtgaaattaa 15920781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 6171454 - 6171508
Alignment:
Q  143 gaggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||| ||||||| |||||||||| | ||||||||||||||||||    
T  6171454 gaggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaag 6171508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 6495591 - 6495517
Alignment:
Q  33 aaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggg 107  Q
    |||| |||||||||||||||  ||||||  |||||||||||||||||||||||| |  |||| ||| ||||||||    
T  6495591 aaatagcacaattggcaaaaagataggggacaaaagtgcaattaaacacaagaatggtcatctaactagaaaggg 6495517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 17345785 - 17345736
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  17345785 ggggtgcaaaattgcataattagcaaaagatag-gggaaaagtgcaattaa 17345736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 2638874 - 2638822
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||||    
T  2638874 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 2638822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 18296130 - 18296078
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||| ||||||||    
T  18296130 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaag 18296078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 26842238 - 26842290
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||| |||||    
T  26842238 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaag 26842290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 30191225 - 30191277
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||  |||||||| | ||||||||||||||||||    
T  30191225 ggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaag 30191277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 7591255 - 7591204
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| ||||||||||| || ||||||| |||||||    
T  7591255 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 17345902 - 17345851
Alignment:
Q  32 aaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||  ||||| ||||||| |||||||||||||| |||||||    
T  17345902 aaaatcgcacaattaacaaaaatatagggggcaaaagtgcaattgaacacaa 17345851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 18055316 - 18055367
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaa 195  Q
    |||||||||||||||||||||  |||||| ||||||| ||||||||||||||    
T  18055316 ggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaa 18055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 26692820 - 26692871
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagataga-gggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| |||||  ||||| |||||||||||||||||    
T  26692820 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 36190133 - 36190078
Alignment:
Q  202 gaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgt 257  Q
    |||||| |||||||||||| ||| ||||| | ||||||||||||||||||| ||||    
T  36190133 gaataagtggggtgtctgaggttcgaacctcgacccttacatataacaatgtatgt 36190078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 41790917 - 41790963
Alignment:
Q  30 gcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  41790917 gcaaaatcgcacaattggcaaaa-tataggggggaaaagtgcaattaa 41790963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 43495484 - 43495535
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaa-gatagagggaaaagtgcaattaa 195  Q
    |||||||||||||||||||||  ||||| ||||| |||||||||||||||||    
T  43495484 ggggtgcaaaatcgcacaattgacaaaaagatagggggaaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 6495723 - 6495773
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    |||||||||||||||||||  |||||||||| | |||||||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaag 6495773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 8851198 - 8851149
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 79  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  8851198 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaaac 8851149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 11883797 - 11883743
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  11883797 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 11883743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 23683775 - 23683725
Alignment:
Q  202 gaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatg 252  Q
    ||||||||||||||||||| ||| ||||| |||||| ||||||||| ||||    
T  23683775 gaataaatggggtgtctgaggttcgaaccccaacccctacatataataatg 23683725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 26737660 - 26737706
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaatt 75  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||||    
T  26737660 tgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 29230334 - 29230284
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    ||||||||||| |||||||  |||||||||||| |||||||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaag 29230284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 32673023 - 32673077
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  32673023 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 32673077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 40221492 - 40221546
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  |||||| ||||||| |||||| |||||||    
T  40221492 tgcaaaatcgcacaattagcaaaaagatagggggcaaaagcgcaattgaacacaa 40221546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 44132579 - 44132645
Alignment:
Q  202 gaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    ||||||| |||||||||| |||| ||||| | |||  | |||||||||||||||||||||| |||||    
T  44132579 gaataaacggggtgtctggagttcgaaccccgacctctgcatataacaatgcatgtctctgccaact 44132645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  146 gggtgcaaaatcgcacaattagc-aaaagatagaggg-aaaagtgcaatt 193  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 29343633 - 29343584
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaa 195  Q
    ||||||||||| |||||||  |||||||||||| ||||||||||||||||    
T  29343633 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaa 29343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 43495356 - 43495311
Alignment:
Q  152 aaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||    
T  43495356 aaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaag 43495311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 45314489 - 45314424
Alignment:
Q  202 gaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaac 267  Q
    |||||| |||| ||||||||||| ||||| | |||  | ||||||||||||||||||| |||||||    
T  45314489 gaataagtgggatgtctgaagttcgaaccccgacctctgcatataacaatgcatgtctttgtcaac 45314424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 5378715 - 5378663
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  5378715 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 5378663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 5378711 - 5378664
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  5378711 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 5378664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 17851032 - 17850980
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  17851032 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 17850980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 17851028 - 17850981
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  17851028 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 17850981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 20347468 - 20347515
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  20347468 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 20347515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 30190973 - 30190926
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  30190973 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 30190926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 37720258 - 37720206
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  37720258 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 37720206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 37720254 - 37720207
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  37720254 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 37720207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 40221487 - 40221515
Alignment:
Q  144 aggggtgcaaaatcgcacaattagcaaaa 172  Q
    |||||||||||||||||||||||||||||    
T  40221487 aggggtgcaaaatcgcacaattagcaaaa 40221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaa-gat-agagggaaaagtgcaatt 193  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 41790912 - 41790964
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||| |||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  41790912 ggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaag 41790964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 21032151 - 21031981
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    |||||||||||||||||| ||| |  |||||| |||||||||||| |||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  21032151 tgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaactaaacacaagaaggtccatctaaccagaaagggggcaaaaagatggggtgcaaa 21032052  T
Q  128 atcgttc-nnnnnnnnga-ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||| ||         || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  21032051 atcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagttagggggaaaagtgcaattaag 21031981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 31598157 - 31598324
Alignment:
Q  32 aaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaaatc 130  Q
    ||||||||||||||| |||||  |||||| ||||||||||||||| ||| ||||| || |||| ||||| ||||||| |||||| ||||||||||||||     
T  31598157 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattacacataagaaggttcatctaaccaaaaagggggcaaaaagatggggtgcaaaatt 31598256  T
Q  131 gttc--nnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    | ||          || |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  31598257 gctcaaaaaaaaaagaagggtgcaaaatcgcacaattagcaaaagatagagggaaaaatacaattaag 31598324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 33658614 - 33658513
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    |||||||| |||||||||||||||  |||  | ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||| |||||    
T  33658614 tgcaaaattgcacaattggcaaaaagataaagggcaaaagtgcaattaaacacaagaaggtccatctaaccagaaagggggcaaaaagatggggagcaaa 33658515  T
Q  128 at 129  Q
    ||    
T  33658514 at 33658513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 31598641 - 31598741
Alignment:
Q  32 aaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaaatc 130  Q
    ||||||||||||||| |||||  |||||| ||||||||||||||| ||||||||| || |||| ||||| |||||||||||||| ||||| |||||||||    
T  31598641 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattacacacaagaaggttcatctaaccaaaaaggggacaaaaagatgggatgcaaaatc 31598740  T
Q  131 g 131  Q
    |    
T  31598741 g 31598741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 23250774 - 23250875
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 128  Q
    |||||||||||||||||  | ||| ||||||| | ||||||||||||||||||||||| ||||||| || |||||||||| ||||| ||||||| |||||    
T  23250774 tgcaaaatcgcacaattaaccaaaatataggg-gtaaaagtgcaattaaacacaagaaggtccatctaatcagaaagggggcaaaagatggggtacaaaa 23250872  T
Q  129 tcg 131  Q
    |||    
T  23250873 tcg 23250875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 10039731 - 10039678
Alignment:
Q  143 gaggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10039731 gaggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaag 10039678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 3825580 - 3825530
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 3403771 - 3403719
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  3403771 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 3403719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 3403989 - 3404041
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  3403989 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 3404041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 11656782 - 11656834
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  11656782 ggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaag 11656834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 13579651 - 13579702
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  13579651 ggggtgcaaaatcgcacaattagcaaacgatagggagaaaagtgcaattaag 13579702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 30388111 - 30388064
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  30388111 tgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaag 30388064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 31598732 - 31598778
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||    
T  31598732 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 31598778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 18241908 - 18241856
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  18241908 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 18241856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 30388362 - 30388402
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaa 185  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  30388362 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaa 30388402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 33829044 - 33828992
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  33829044 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 33828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 33829636 - 33829688
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  33829636 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 33829688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 33655115 - 33655166
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||| |||||||||||||||||||  |||| |||||||||||||    
T  33655115 ggggtgcaaaattgcacaattagcaaaagataaggggacaagtgcaattaag 33655166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 2762657 - 2762603
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  |||||| |||||||||||||| |||||||    
T  2762657 tgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaa 2762603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 10039847 - 10039901
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  |||||| |||||||||||||| |||||||    
T  10039847 tgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaa 10039901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 9443474 - 9443535
Alignment:
Q  197 aaggagaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtc 258  Q
    ||||||||||| |||||||||||| ||| ||| | | |||| ||||||||||||||||||||    
T  9443474 aaggagaataagtggggtgtctgaggttcgaatcccgacccatacatataacaatgcatgtc 9443535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 21032285 - 21032332
Alignment:
Q  150 gcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21032285 gcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 21032332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 33972047 - 33971996
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||| ||||||| |||||||||| || |||| ||||||||||    
T  33972047 ggggtgcaaaatcgtacaattaacaaaagataggggaaaaactgcaattaag 33971996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 2762661 - 2762611
Alignment:
Q  145 ggggtgcaaaatcgcacaattagc-aaaagatagaggg-aaaagtgcaatt 193  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  2762661 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 3403869 - 3403923
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  3403869 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 3403923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 10039843 - 10039893
Alignment:
Q  145 ggggtgcaaaatcgcacaattagc-aaaagatagaggg-aaaagtgcaatt 193  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  10039843 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 11656654 - 11656600
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    |||||||||||||||||  |||||  |||||| |||||||||||||| |||||||    
T  11656654 tgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaattgaacacaa 11656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 13579532 - 13579586
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    |||| ||| |||||||| |||||| ||||||| |||||||||||||| |||||||    
T  13579532 tgcagaattgcacaattagcaaaaatatagggggcaaaagtgcaattgaacacaa 13579586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 30388244 - 30388298
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  30388244 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 30388298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 32734000 - 32734049
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 79  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  32734000 tgcaaaatcgcacaattggc-aaactatagggaggaaaagtgcaattaaac 32734049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 12714481 - 12714436
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaatt 193  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||    
T  12714481 tgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 20858400 - 20858465
Alignment:
Q  203 aataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    ||||||||||||||| | | || ||||| |||||| | |||||||||||||||||| ||| |||||    
T  20858400 aataaatggggtgtccggaattcgaaccccaacccctgcatataacaatgcatgtccctgccaact 20858465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 18242156 - 18242188
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatag 177  Q
    ||||||||||||||||||||| |||||||||||    
T  18242156 ggggtgcaaaatcgcacaattggcaaaagatag 18242188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 47871005 - 47871173
Alignment:
Q  30 gcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaat 129  Q
    |||||||||||||||||||||||  |||||| ||||||||| ||||| ||||||||| ||||||| ||||||||| |||  |||| ||||||||||||||    
T  47871005 gcaaaatcgcacaattggcaaaaagataggg-gcaaaagtgtaattatacacaagaaggtccatctaaccagaaaaggggaaaaagatggggtgcaaaat 47871103  T
Q  130 cgttcnnnnnnnnga---ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    || ||         |   ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47871104 cgctcaaaaaaaaaagtgggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaag 47871173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 29 - 196
Target Start/End: Original strand, 17372477 - 17372644
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaa-ggggacaaaaaatggggtgcaaa 127  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||  |||||| | ||||||| ||||  |||| ||||||||||||    
T  17372477 tgcaaaatcgcacaattggcaaaaagatagggtgcaaaagtgccattaaacacaagaagttccatctacccagaaatggggctaaaagatggggtgcaaa 17372576  T
Q  128 atcgttcnnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||| ||          |||||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  17372577 atcattaaaaaaaaaaaggggtgcaaaatcgcacaattagtaaaatatag-gggaaaagtgcaattaag 17372644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 14015874 - 14015977
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtg-caaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaa 127  Q
    ||||||||||||||||||||||||  |||||| | |||||||||||||||||| ||||  ||||||| |||||||| |||||||||| ||||||||||||    
T  14015874 tgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaattaaacataagatggtccatctaaccagaatggggacaaaagatggggtgcaaa 14015973  T
Q  128 atcg 131  Q
    ||||    
T  14015974 atcg 14015977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 45060776 - 45060862
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaa 116  Q
    |||||||||| |||||||||||||  |||||| |||||||||||||| ||||||| |||||||||| ||||||||||||| |||||||    
T  45060776 tgcaaaatcgaacaattggcaaaaagataggg-gcaaaagtgcaattgaacacaaaaaagtccatctaaccagaaagggggcaaaaaa 45060862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 13657625 - 13657701
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaag 105  Q
    ||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||| ||||||| || |||||||    
T  13657625 tgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaaacacaagaaggtccatctaatcagaaag 13657701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 17440929 - 17440830
Alignment:
Q  31 caaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccag-aaaggggacaaaaaatggggtgcaaaat 129  Q
    |||||||||||||||||||||| |||| || |||||| |||||||||||||||||| || |||| |||||| |||||||| |||| ||| | ||||||||    
T  17440929 caaaatcgcacaattggcaaaaatatatggggcaaaaatgcaattaaacacaagaaggttcatctaaccagaaaaggggaaaaaagatgagatgcaaaat 17440830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 42627544 - 42627597
Alignment:
Q  143 gaggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42627544 gagggatgcaaaatcacacaattagcaaaagatagagggaaaagtgcaattaag 42627597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 4947432 - 4947333
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 128  Q
    ||||||||||||||||||||||||  |||| | |||||||||||||| | ||||| |||||||||| ||| ||||||| |  |||| |||||||||||||    
T  4947432 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattgagcacaa-aaagtccatctaactagaaaggagcaaaaagatggggtgcaaaa 4947334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 14015964 - 14016014
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||    
T  14015964 ggggtgcaaaatcgcacaattagcaaaagataggatgaaaagtgcaattaa 14016014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 20969018 - 20969071
Alignment:
Q  144 aggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  20969018 aggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 20969071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 9027032 - 9027084
Alignment:
Q  144 aggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||| |||||||    
T  9027032 aggggtgtaaaattgcacaattagcaaaagatagggggaaaagtgaaattaag 9027084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 10293909 - 10293961
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  10293909 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 10293961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 17372352 - 17372300
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaa-gtgcaattaag 196  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||||||    
T  17372352 ggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaag 17372300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 18874935 - 18874887
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaatt 193  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatt 18874887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 18875191 - 18875243
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  18875191 ggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaag 18875243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 9026906 - 9026739
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacac-aagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaa 127  Q
    ||||||||||||||||| ||||||  |||||| |||||||||||||| ||||| ||||  |       || ||||||||||  |||| ||||||||||||    
T  9026906 tgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagacggggggcaaaatcagaaagggggaaaaagatggggtgcaaa 9026807  T
Q  128 atcgttcnnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||| ||         ||||||||||||| ||||||||| ||||||||||  |||||| |||||||||    
T  9026806 atcgctcaaaaaataaaggggtgcaaaattgcacaattaacaaaagataggaggaaaaatgcaattaa 9026739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 26540740 - 26540639
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    |||||||| ||||||||| |||||  |||||| ||||||||||||||||| |||||||  |||||| ||||||||| | | |||||| || |||||||||    
T  26540740 tgcaaaattgcacaattgacaaaaa-ataggg-gcaaaagtgcaattaaatacaagaagatccatctaaccagaaatgaggcaaaaagatagggtgcaaa 26540643  T
Q  128 atcg 131  Q
    ||||    
T  26540642 atcg 26540639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 42673031 - 42672980
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  42673031 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 42672980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 45060872 - 45060923
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaag 45060923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 1101094 - 1101147
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    |||||||||||||||||| |||||  |||||| ||||||||||||||||||||||    
T  1101094 tgcaaaatcgcacaattgacaaaaagataggg-gcaaaagtgcaattaaacacaa 1101147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 4045650 - 4045716
Alignment:
Q  202 gaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    |||||| ||||||||| |||||| ||||| | |||| | |||||||||||||||||| |||||||||    
T  4045650 gaataagtggggtgtccgaagttcgaacctcgacccctgcatataacaatgcatgtccctgtcaact 4045716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 18875063 - 18875009
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  |||||| |||||||||||||| |||||||    
T  18875063 tgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaa 18875009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 20968900 - 20968954
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||| ||| || |||||||||||||| |||||||    
T  20968900 tgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaa 20968954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 17441066 - 17441115
Alignment:
Q  148 gtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  17441066 gtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaag 17441115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 23630033 - 23630086
Alignment:
Q  143 gaggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaa 195  Q
    |||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  23630033 gaggggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaa 23630086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 47870878 - 47870825
Alignment:
Q  144 aggggtgcaaaat-cgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||| |||| |||||||||||||||| || |||||||||||||||    
T  47870878 aggggtgcaaaattcgcataattagcaaaagataggggaaaaagtgcaattaag 47870825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 3644720 - 3644772
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaa-aagatagaggg-aaaagtgcaattaa 195  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  3644720 ggggtgcaaaatcgcacaattagcaagaggatagagggcaaaagtgcaattaa 3644772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 20968772 - 20968720
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||| | |||||| |||||||||||    
T  20968772 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaag 20968720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 40848961 - 40849013
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagataga-gggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||||| ||||||||||||||||||    
T  40848961 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaag 40849013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 3353181 - 3353130
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  3353181 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaag 3353130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 24485460 - 24485511
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| | ||||||||||||||||    
T  24485460 ggggtgcaaaatcgcacaattggcaaactatagggagaaaagtgcaattaag 24485511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 26540876 - 26540915
Alignment:
Q  152 aaaatcgcacaattagcaaaagatagagggaaaagtgcaa 191  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  26540876 aaaatcgcacaattagcaaaagatagggggaaaggtgcaa 26540915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 27238900 - 27238951
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagataga-gggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| |||||  ||||| |||||||||||||||||    
T  27238900 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 40848574 - 40848523
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||| |||||||||||||| |||||  |||| ||||||||||||||||||    
T  40848574 ggggtgtaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 40848523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 42673296 - 42673347
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  42673296 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaag 42673347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 1928434 - 1928484
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| ||||||||||| | | ||| |||||||||    
T  1928434 ggggtgcaaaatcgcacaattggcaaaagatagggaggaaaatgcaattaa 1928484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 3461764 - 3461806
Alignment:
Q  226 gaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    ||||| |||||| |||||||||||||||||||| |||||||||    
T  3461764 gaaccccaacccctacatataacaatgcatgtccctgtcaact 3461806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 3644588 - 3644538
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaa 195  Q
    |||||||||||  ||||||||||||||||||||| | ||||||||||||||    
T  3644588 gggtgcaaaattacacaattagcaaaagatagagagaaaaagtgcaattaa 3644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 3644724 - 3644778
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| |||| |  |||| | ||||||||||||||||||||||    
T  3644724 tgcaaaatcgcacaattagcaagaggatagagggcaaaagtgcaattaaacacaa 3644778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 8315083 - 8315133
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||  ||||| |||| ||| ||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatataggggggaaagtgcaattaag 8315133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 45060644 - 45060598
Alignment:
Q  151 caaaatcgcacaattagcaaaagatag-agggaaaagtgcaattaag 196  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  45060644 caaaatcgcataattagcaaaagatagtggggaaaagtgcaattaag 45060598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 4947312 - 4947263
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaatta 194  Q
    ||||||||||||||||||||| ||||| |||| || ||||||||||||||    
T  4947312 gggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 3353553 - 3353597
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaa 191  Q
    ||||||||||||||||||| |||||  |||| |||||||||||||    
T  3353553 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaa 3353597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 3644783 - 3644835
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||| || || ||||||| ||||||||||    
T  3644783 ggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaag 3644835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 10348799 - 10348851
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| |||| |||||||||||||||    
T  10348799 ggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaag 10348851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 18875065 - 18875017
Alignment:
Q  147 ggtgcaaaatcgcacaattagc-aaaagatagaggg-aaaagtgcaatt 193  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 19137703 - 19137643
Alignment:
Q  197 aaggagaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgt 257  Q
    |||||||||||||||||||||||  ||| ||||| |  ||| | |||||||||||||||||    
T  19137703 aaggagaataaatggggtgtctggggttcgaacctcggcccctgcatataacaatgcatgt 19137643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 20969023 - 20969070
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  20969023 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 20969070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 28702328 - 28702280
Alignment:
Q  148 gtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||  ||||||||||||| ||||||| |||||||    
T  28702328 gtgcaaaatcgcataattgacaaaagatagaggaaaaagtgaaattaag 28702280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 48159951 - 48159899
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  48159951 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 48159899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 48159947 - 48159900
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  48159947 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 48159900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 24775690 - 24775592
Alignment:
Q  31 caaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaat 129  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| | ||||||| |||||||||||||| |||| ||||||||||||||    
T  24775690 caaaatcgcacaattgacaaaaatatagggggcaaaagtgcaattaaacacaaggatgtccatctaaccagaaaggggataaaagatggggtgcaaaat 24775592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 54509002 - 54509155
Alignment:
Q  30 gcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaat 129  Q
    |||||||||||||||||||||||| || |||  |||||||||||||||||| ||||| ||||||| ||| ||||||||| |||||  ||| |||||||||    
T  54509002 gcaaaatcgcacaattggcaaaatgatgggg--caaaagtgcaattaaacataagaaggtccatctaactagaaagggggcaaaatttggagtgcaaaat 54509099  T
Q  130 cgttcnnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagggaaaa 185  Q
    || ||           ||||||||||||||||||||||||||| |||| |||||||    
T  54509100 cgctcaaaaaaaaagagggtgcaaaatcgcacaattagcaaaaaatagggggaaaa 54509155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 8182042 - 8181939
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggac-aaaaaatggggtgcaaa 127  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||| ||||||||  ||| || ||||| ||||||| | |||||||||||||||||    
T  8182042 tgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagcacaagaagttccttctaaccaaaaagggggcaaaaaaatggggtgcaaa 8181943  T
Q  128 atcg 131  Q
    ||||    
T  8181942 atcg 8181939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 39415407 - 39415564
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaatta-tagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaa 126  Q
    |||||||||||||| ||| |||||  | ||||| |||||||||||||||| ||||| || ||||||| ||||| ||||||| |||||| |||| ||||||    
T  39415407 tgcaaaatcgcacagttgacaaaaaaaatagggggcaaaagtgcaattaagcacaataaggtccatctaaccataaagggggcaaaaagatggagtgcaa 39415506  T
Q  127 aatcgttcnnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagggaaaa 185  Q
    ||||| ||         |||| |||||||| ||||||||||||||||||||||||||||    
T  39415507 aatcgctcaaaaaaaa-agggatgcaaaattgcacaattagcaaaagatagagggaaaa 39415564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 3930480 - 3930531
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3930480 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaag 3930531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 49178690 - 49178587
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||| |||||||||| || |||| || ||||||||   |||||| || |||||||||    
T  49178690 tgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaattgaacacaagaaggttcatctaatcagaaaggaagcaaaaagatagggtgcaaa 49178591  T
Q  128 atcg 131  Q
    ||||    
T  49178590 atcg 49178587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 7603297 - 7603369
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccag 101  Q
    |||||||||||||| |||| ||||  |||||| |||||||||||||||||||||| |||||||||| ||||||    
T  7603297 tgcaaaatcgcacatttggtaaaaagatagggagcaaaagtgcaattaaacacaaaaaagtccatctaaccag 7603369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 16555817 - 16555869
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  16555817 ggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaag 16555869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 35393776 - 35393827
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||    
T  35393776 ggggtgcaaattcgcacaattagcaaaagatagggtgaaaagtgcaattaag 35393827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 47219203 - 47219252
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaa 195  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  47219203 ggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaa 47219252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 13198906 - 13198958
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  13198906 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 13198958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 16555569 - 16555517
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  16555569 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaag 16555517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 18077202 - 18077254
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  18077202 ggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaag 18077254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 24775783 - 24775835
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  24775783 ggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaag 24775835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 50678833 - 50678781
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  50678833 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 50678781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 56505747 - 56505695
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  56505747 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 56505695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 8488482 - 8488533
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||| ||||||||  | ||||||||||||||||    
T  8488482 ggggtgcaaaatcgcacaattagaaaaagataaggcgaaaagtgcaattaag 8488533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 11241661 - 11241712
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||| ||||||||    
T  11241661 ggggtgcaaaatcccacaattggcaaaagatagggggaaaagtacaattaag 11241712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 13198657 - 13198606
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  13198657 ggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 22681628 - 22681577
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  |||||||||| ||| ||||||||||||||    
T  22681628 ggggtgcaaaatcgcacaattgacaaaagataggggggaaagtgcaattaag 22681577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 27304770 - 27304720
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  27304770 ggggtgcaaaatcgcacaattagcagaagatag-gggaaaagggcaattaag 27304720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 36096475 - 36096526
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  36096475 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 22681881 - 22681931
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatag-agggaaaagtgcaattaag 196  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaag 22681931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 49178816 - 49178866
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaatta 194  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  49178816 ggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 28196396 - 28196349
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  28196396 tgcaaaatcgcacaattggc-aaattataggggggaaaagtgcaattaa 28196349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 36095871 - 36095819
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||||    
T  36095871 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 36095819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 50679424 - 50679476
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    |||||||||||||| |||||| ||||||||||| || ||||||||||||||||    
T  50679424 ggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaag 50679476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 3930232 - 3930181
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||| |||||  ||||||||| || |||||||||||||||    
T  3930232 ggggtgcaaaatcgcataattaataaaagataggggaaaaagtgcaattaag 3930181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 7603197 - 7603147
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||| |||||||||  ||||||||| ||||||||||||||||||    
T  7603197 ggggtgcaaaattgcacaattaaaaaaagatag-gggaaaagtgcaattaag 7603147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 18497476 - 18497401
Alignment:
Q  197 aaggagaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgt-ctctgtcaactaag 271  Q
    ||||||||||| |||| |||| | |||| ||||| |||||| | ||||||||||||||||| | ||||||||||||    
T  18497476 aaggagaataagtgggatgtccggagttcgaaccccaacccctgcatataacaatgcatgtcccctgtcaactaag 18497401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 26207414 - 26207363
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| ||| ||||||||||||||    
T  26207414 ggggtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaag 26207363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 177
Target Start/End: Complemental strand, 39415277 - 39415246
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatag 177  Q
    ||||||||||||||||||||||||||||||||    
T  39415277 gggtgcaaaatcgcacaattagcaaaagatag 39415246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 8488358 - 8488304
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    |||||||| |||||||| ||||||  |||||| |||||||||||||| |||||||    
T  8488358 tgcaaaattgcacaattagcaaaaacatagggggcaaaagtgcaattgaacacaa 8488304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 27304893 - 27304943
Alignment:
Q  145 ggggtgcaaaatcgcacaattagc-aaaagatagaggg-aaaagtgcaatt 193  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  27304893 ggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 35393650 - 35393596
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  |||||| |||||||| ||||| |||||||    
T  35393650 tgcaaaatcgcacaattagcaaaaagatagggggcaaaagttcaattgaacacaa 35393596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 8182046 - 8181993
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaa-gatagaggg-aaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||| ||||| ||| |||||||||||||||    
T  8182046 ggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaag 8181993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 8182172 - 8182225
Alignment:
Q  145 ggggtgcaaaatcgcacaattagc-aaaagatagagg-gaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||| |||| |||| || ||||||||||||||||    
T  8182172 ggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaattaag 8182225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 8488287 - 8488211
Alignment:
Q  99 cagaaaggggacaaaaaatggggtgcaaaatcgttcnnnnnnnngaggggtgcaaaatcgcacaattagcaaaagata 176  Q
    ||||||||||| |||||||||| ||||||||||||          ||||||||||||||||||||||| |||||||||    
T  8488287 cagaaaggggaaaaaaaatgggctgcaaaatcgttaaaaaaaaa-aggggtgcaaaatcgcacaattaacaaaagata 8488211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 4239366 - 4239418
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| ||| |||||||||||||||    
T  4239366 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 4239418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 4239370 - 4239417
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  4239370 tgcaaaatcgcacaattggc-aaactatagggggaaaaagtgcaattaa 4239417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 5206042 - 5205990
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    |||||||||||||||  ||||| |||||||||| | |||||||||||||||||    
T  5206042 ggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaag 5205990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 7603422 - 7603470
Alignment:
Q  148 gtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||   ||||||||| || |||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagataggggaaaaagtgcaattaag 7603470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 9023298 - 9023246
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| || ||||||||||||||||    
T  9023298 ggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaag 9023246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 9380745 - 9380792
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  9380745 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 9380792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 11241439 - 11241391
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaag 196  Q
    |||||||||||||||||| |||||||| ||  |||||||||||||||||    
T  11241439 tgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaag 11241391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 11529222 - 11529170
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||| ||||||| ||| | |||||||||||||||||    
T  11529222 ggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaag 11529170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 16555695 - 16555743
Alignment:
Q  147 ggtgcaaaatcgcacaattagc-aaaagat-agagggaaaagtgcaatt 193  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 25161932 - 25161880
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  25161932 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25161880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 25161928 - 25161881
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  25161928 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 25161881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 28196400 - 28196348
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  28196400 ggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaag 28196348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 28196773 - 28196825
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  28196773 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 28196825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 28196777 - 28196824
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  28196777 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 28196824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 32703275 - 32703228
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||| |||||||||||||||||| |||||||| | ||||||||||||||    
T  32703275 tgcataatcgcacaattggcaaa-ttataggggggaaaagtgcaattaa 32703228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 32703650 - 32703702
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  32703650 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 32703702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 32703654 - 32703701
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  32703654 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 32703701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 43051252 - 43051304
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||| ||||||||||| || ||||| ||||||||||    
T  43051252 ggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaag 43051304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 49178696 - 49178644
Alignment:
Q  143 gaggggtgcaaaatcgcacaattagc-aaaagatagaggg-aaaagtgcaatt 193  Q
    ||||||||||||||||||||||| || ||||||||| ||| ||||||||||||    
T  49178696 gaggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaatt 49178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 56505743 - 56505696
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  56505743 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 56505696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 31848067 - 31847898
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    ||||||||||||||||||||||||  |||| | ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| || |||||||||    
T  31848067 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaaacacaagaaggtccatcaaaccagaaagggggcaaaaagatcgggtgcaaa 31847968  T
Q  128 atcgttcnnnnnnnnga-ggggtgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaa 195  Q
    |||| ||         | ||| |||||||| |||||||||||||||||| || ||| |||||||||||||    
T  31847967 atcgctcaaaaaaaatatgggatgcaaaattgcacaattagcaaaagataagggggtaaagtgcaattaa 31847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 46057067 - 46056905
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 128  Q
    ||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||| ||| ||| ||||| ||||||| ||||| || ||||||||||    
T  46057067 tgcaaaatcgcacaattggcaaaaaaatagggggcaaaattgcaattaaacacaagaaggtctatctaaccaaaaagggg-caaaagatagggtgcaaaa 46056969  T
Q  129 tcgttcnnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    | | ||         |  |||||||||||||| |||||||||||||||| ||| ||||||||||||||    
T  46056968 ttgctcaaaaaa---aaaggtgcaaaatcgcaaaattagcaaaagatag-ggggaaagtgcaattaag 46056905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 13589659 - 13589710
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13589659 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaag 13589710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 1176886 - 1176719
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    |||||||| ||||||||| |||||  |||||| | |||||||||||||||||||||||  | |||| ||  | ||||||  |||||| || |||||||||    
T  1176886 tgcaaaattgcacaattgacaaaag-atagggggtaaaagtgcaattaaacacaagaagtttcatctaataaaaaagggagcaaaaagatagggtgcaaa 1176788  T
Q  128 atcgttcnnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||| |         ||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  1176787 atcgctaaaaaaaaagagggatgcaaaatcgcacaattagcaaaatataggggggaaagtgcaattaag 1176719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 17518602 - 17518653
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17518602 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 41083211 - 41083262
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  41083211 ggggtgcaaaatcgcacaactaacaaaagatagggggaaaagtgcaattaag 41083262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 22149701 - 22149750
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaa 195  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 8108993 - 8109045
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  8108993 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 8109045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 47955360 - 47955308
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  47955360 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 47955308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 48190825 - 48190773
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  48190825 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 48190773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 49284463 - 49284411
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  49284463 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 49284411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 8108775 - 8108724
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaa 195  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||||||||    
T  8108775 ggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaa 8108724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 17518356 - 17518305
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||||  |||||| |||||||||||    
T  17518356 ggggtgcaaaatcgcacaattaacaaaagataaggggaaaggtgcaattaag 17518305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 20371353 - 20371404
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  20371353 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 20371404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 22149455 - 22149405
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  22149455 ggggtgcaaaatcgcacaattaccaaa-gatagggggaaaagtgcaattaag 22149405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 27172169 - 27172118
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  27172169 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 27172118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 3140417 - 3140371
Alignment:
Q  222 gtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||    
T  3140417 gtttgaaccccgacccctacatataacaatgcatgtctctgtcaact 3140371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 20480613 - 20480663
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 20480663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 22149582 - 22149636
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || ||||||||||||||||||||||    
T  22149582 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaa 22149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 23336512 - 23336560
Alignment:
Q  209 tggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgt 257  Q
    ||||||||| | ||||||||||||||||| | |||||||||||||||||    
T  23336512 tggggtgtccggagtttgaaccacaacccctgcatataacaatgcatgt 23336560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 31848192 - 31848244
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    |||||||||||||| ||||||| |||||||||| || ||||||||||||||||    
T  31848192 ggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaag 31848244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 47955608 - 47955660
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||  |||||||| | ||||||||||||||||||    
T  47955608 ggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaag 47955660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 48191355 - 48191407
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  48191355 ggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaag 48191407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 1177018 - 1177069
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaa 195  Q
    |||||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  1177018 ggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaa 1177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 20480221 - 20480170
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  20480221 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaag 20480170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 42801951 - 42801892
Alignment:
Q  209 tggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    |||||||||||  ||| ||||| |||||  | ||||||||||||||||||||||||||||    
T  42801951 tggggtgtctggggttcgaaccccaacctctgcatataacaatgcatgtctctgtcaact 42801892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 50615621 - 50615672
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  50615621 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaag 50615672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 50623449 - 50623500
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  50623449 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaag 50623500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 16182888 - 16182822
Alignment:
Q  202 gaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    |||||| ||||||||| |  ||||||||| || ||| ||||||||| |||||||||||||| |||||    
T  16182888 gaataagtggggtgtccggggtttgaaccccagcccctacatataataatgcatgtctctgccaact 16182822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 17518484 - 17518538
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  17518484 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 17518538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 31848073 - 31848019
Alignment:
Q  143 gaggggtgcaaaatcgcacaattagc-aaaagatagaggg-aaaagtgcaattaa 195  Q
    ||||| ||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  31848073 gagggatgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaa 31848019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 46823893 - 46823844
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 79  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  46823893 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaaac 46823844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 48313790 - 48313832
Alignment:
Q  143 gaggggtgcaaaatcgcacaattagcaaaagatagagggaaaa 185  Q
    |||||||||||||| |||||||||||||||||||  |||||||    
T  48313790 gaggggtgcaaaattgcacaattagcaaaagataatgggaaaa 48313832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 50430085 - 50430134
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 79  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  50430085 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaaac 50430134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 50575985 - 50575924
Alignment:
Q  197 aaggagaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtc 258  Q
    |||| |||||| || ||||||||| ||| ||||| || ||||| ||||||||||||||||||    
T  50575985 aaggtgaataagtgaggtgtctgaggttcgaaccccagcccttgcatataacaatgcatgtc 50575924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 6002291 - 6002239
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||| |||||||  |||||||||| || ||||||||||||||||    
T  6002291 ggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaag 6002239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 8108997 - 8109044
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  8108997 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 8109044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 9347180 - 9347128
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  9347180 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 9347128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 9347176 - 9347129
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  9347176 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 9347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 13918500 - 13918448
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| |||| |||||||||||||||    
T  13918500 ggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaag 13918448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 13918871 - 13918918
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  13918871 tgcaaaatcgcacaattggc-aaactatagggaggaaaagtgcaattaa 13918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 32163043 - 32163095
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  32163043 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 32163095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 32163047 - 32163094
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  32163047 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 32163094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 39692000 - 39692052
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||||||||||    
T  39692000 ggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaag 39692052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 39692004 - 39692051
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||| ||||| ||||||| | ||||||||||||||    
T  39692004 tgcaaaatcgcacaattgacaaaa-tataggggggaaaagtgcaattaa 39692051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 41082959 - 41082923
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagagggaaaa 185  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  41082959 tgcaaaatcgcacaattggcaaaagatagggggaaaa 41082923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 44911079 - 44911027
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||| ||| | ||| ||||||||||||||    
T  44911079 ggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaag 44911027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 44911075 - 44911028
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||||||| ||||||| |  |||||||||||||    
T  44911075 tgcaaaatcgcacaattggcaaaa-tatagggggggaaagtgcaattaa 44911028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 46057199 - 46057243
Alignment:
Q  151 caaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||| ||| |||||||||||||||| || ||||||||||||||    
T  46057199 caaaattgcataattagcaaaagataggggaaaaagtgcaattaa 46057243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 47955356 - 47955309
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  47955356 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 47955309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 48105116 - 48105168
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  || || ||||||||||||||||||    
T  48105116 ggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaag 48105168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 50526472 - 50526524
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| ||| |||||||||||||||    
T  50526472 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 50526476 - 50526523
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  50526476 tgcaaaatcgcacaattggc-aaactatagggggaaaaagtgcaattaa 50526523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 27096216 - 27096049
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggac-aaaaaatggggtgcaaa 127  Q
    ||||||||||||||||||| ||||  |||||| ||||||||||||||||| |||||||  | |||| ||||||||||||| | |||||||||||||||||    
T  27096216 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaaaacaagaagtttcatctaaccagaaagggggcaaaaaaatggggtgcaaa 27096117  T
Q  128 atcgttcnnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||| |          | || | |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  27096116 atcgct-aaaaaaaaaaaggatacaaaatcgcacaattagcaaaatataggggggaaagtgcaattaag 27096049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 196
Target Start/End: Original strand, 27182087 - 27182254
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggac-aaaaaatggggtgcaaa 127  Q
    ||||||||||||||||||| ||||  |||||| ||||||||||||||||| |||||||  | |||| ||||||||||||| | |||||||||||||||||    
T  27182087 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaaaacaagaagtttcatctaaccagaaagggggcaaaaaaatggggtgcaaa 27182186  T
Q  128 atcgttcnnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||| |          | || | |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  27182187 atcgct-aaaaaaaaaaaggatacaaaatcgcacaattagcaaaatataggggggaaagtgcaattaag 27182254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 23686566 - 23686423
Alignment:
Q  55 atagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaatcgttc-nnnnnnnngag-gggtgca 152  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||   ||||||||||||| ||         ||| |||||||    
T  23686566 atagggggcaaaagtgcaattaaacacaagaaggtccatctaaccagaaatggggcaaaaagatgggtgcaaaatcgctcaaaaaaatagagagggtgca 23686467  T
Q  153 aaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||| | |||||||||||||||||| ||||||||||||||||||    
T  23686466 aaattgtacaattagcaaaagatagggggaaaagtgcaattaag 23686423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 5735426 - 5735254
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    ||||||||||||||||||||||||  |||||| | |||||||||| |||||||||||| ||||||| ||||||||| | | |||||| ||| ||||||||    
T  5735426 tgcaaaatcgcacaattggcaaaaagatagggagaaaaagtgcaaataaacacaagaaggtccatctaaccagaaaagtggcaaaaagatgtggtgcaaa 5735327  T
Q  128 atcgttc---nnnnnnnngaggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    |||| ||            ||| ||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  5735326 atcgctcaaaaaaaaaaaaaggagtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaag 5735254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 18925233 - 18925335
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 128  Q
    ||||||||||||||||||||||||  |||||| |||||||| |||||| ||||||||| || |||| ||||||||||  |  ||||||||||||||||||    
T  18925233 tgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaattacacacaagaaggttcatctaaccagaaagatggtaaaaaatggggtgcaaaa 18925332  T
Q  129 tcg 131  Q
    |||    
T  18925333 tcg 18925335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 38191433 - 38191335
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 128  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||| ||||||||| ||||||| |||| ||||||||  |||| ||||| |||||||    
T  38191433 tgcaaaatcgcacaattggcaaaaagataggg-gaaaaagtgcaattacacacaagaaggtccatctaacccgaaagggggaaaaagatgggatgcaaaa 38191335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 8953772 - 8953669
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaa-aatggggtgcaaa 127  Q
    |||||||||||||| |||  ||||  ||||||  ||||||||||||||||||||| |||||||||| |||||||| || | |||||  ||||||||||||    
T  8953772 tgcaaaatcgcacatttgctaaaaagataggggacaaaagtgcaattaaacacaaaaaagtccatctaaccagaagggcggcaaaaggatggggtgcaaa 8953673  T
Q  128 atcg 131  Q
    ||||    
T  8953672 atcg 8953669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 8953889 - 8953940
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  8953889 ggggtgcaaaattgcacaattaacaaaagatagggggaaaagtgcaattaag 8953940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 18925322 - 18925372
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  18925322 ggggtgcaaaatcgcacaattagcaaaatataga-ggaaaagtgcaattaag 18925372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 6908265 - 6908215
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagatagggggaaaagtgcaattaag 6908215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 35080012 - 35079962
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagatagggggaaaagtgcaattaag 35079962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 33628660 - 33628709
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaatt 193  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  33628660 ggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatt 33628709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 3687656 - 3687708
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  3687656 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 3687708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 9412077 - 9412025
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  9412077 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaag 9412025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 9412325 - 9412377
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  9412325 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 9412377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 13772695 - 13772643
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  13772695 ggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaag 13772643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 13772901 - 13772953
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  13772901 ggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaag 13772953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 34235978 - 34236030
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatag-agggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  34235978 ggggtgcaaaatcgcacaattagcaaaagatagaagggaaaaatacaattaag 34236030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 44599543 - 44599491
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  44599543 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 44599491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 44600135 - 44600187
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  44600135 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 44600187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 3687408 - 3687355
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata--gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||||  | ||||||||||||||||||    
T  3687408 ggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaag 3687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 23686723 - 23686769
Alignment:
Q  151 caaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaag 23686769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 27039590 - 27039533
Alignment:
Q  197 aaggagaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcat 255  Q
    |||| ||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||    
T  27039590 aaggtgaataaatggg-tgtctgaagttcgaatcacaacccctacatataacaatgcat 27039533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 5349733 - 5349782
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||  |||| ||||||||||||||    
T  5349733 ggggtgcaaaatcgcacaattaacaaaagat--aggggaaagtgcaattaag 5349782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 13863367 - 13863315
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||||    
T  13863367 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 13863315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 29292041 - 29292093
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    |||||| |||||||||||||||||||||| ||||||  |||||||||||||||    
T  29292041 ggggtggaaaatcgcacaattagcaaaagttagaggaaaaaagtgcaattaag 29292093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 13744233 - 13744284
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  13744233 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaag 13744284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 33628444 - 33628397
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||| |||||||||||||||||||  | ||||||||||||||||    
T  33628444 tgcaaaattgcacaattagcaaaagataaggagaaaagtgcaattaag 33628397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 33628552 - 33628497
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaag 84  Q
    |||||||| |||||||| ||||||  |||||||||||| |||||||| ||||||||    
T  33628552 tgcaaaattgcacaattagcaaaaagatagggtgcaaatgtgcaattgaacacaag 33628497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 38191312 - 38191265
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaa 195  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||    
T  38191312 tgcaaaatcgcataattagcaaaagataaagaggaaaagtgcaattaa 38191265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 48359373 - 48359322
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  48359373 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaag 48359322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 18925114 - 18925064
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaag 18925064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 20418938 - 20418889
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 79  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  20418938 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaaac 20418889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 22740591 - 22740641
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||    
T  22740591 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 27096346 - 27096392
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||| |||||||  |||||||||| |||||||||||||||||    
T  27096346 tgcaaaatcacacaattgacaaaagatagggggaaaagtgcaattaa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 27181957 - 27181911
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||| |||||||  |||||||||| |||||||||||||||||    
T  27181957 tgcaaaatcacacaattgacaaaagatagggggaaaagtgcaattaa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 35498476 - 35498411
Alignment:
Q  202 gaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    |||||| ||||||||| |||||||||||| |||||| | ||||||| |||||||||| ||| |||||    
T  35498476 gaataagtggggtgtccgaagtttgaacc-caacccctgcatataataatgcatgtccctgccaact 35498411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 42419029 - 42419079
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||||| ||||||||| |||||  |||| |||||||||||||||||    
T  42419029 ggggtgcaaaaacgcacaattggcaaactatagggggaaaagtgcaattaa 42419079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 18864404 - 18864453
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||| |||||  |||| ||||||||| ||||||||    
T  18864404 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtacaattaag 18864453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 3687660 - 3687707
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  3687660 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 3687707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 8643766 - 8643818
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| | ||||||||| |  ||||||||||||||||    
T  8643766 ggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaag 8643818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 9034917 - 9034870
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||| |||||||||||||||||| |||||||| | ||||||||||||||    
T  9034917 tgcagaatcgcacaattggcaaa-ttataggggggaaaagtgcaattaa 9034870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 9035293 - 9035345
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  9035293 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 9035345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 9035297 - 9035344
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  9035297 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 9035344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 9412329 - 9412376
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  9412329 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 9412376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 10533088 - 10533036
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  10533088 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 10533036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 10533084 - 10533037
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  10533084 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 10533037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 13863964 - 13864008
Alignment:
Q  153 aaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||    
T  13863964 aaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 13864008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 15567047 - 15567019
Alignment:
Q  144 aggggtgcaaaatcgcacaattagcaaaa 172  Q
    |||||||||||||||||||||||||||||    
T  15567047 aggggtgcaaaatcgcacaattagcaaaa 15567019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 23799381 - 23799313
Alignment:
Q  200 gagaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    |||||||| ||||||||| || ||| ||| | | |||| | |||||||||||||||||||||| |||||    
T  23799381 gagaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcatgtctctgccaact 23799313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 29291860 - 29291808
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    |||||||||||||||| ||||| |||||||||| | | |||||||||||||||    
T  29291860 ggggtgcaaaatcgcataattatcaaaagatagggagaaaaagtgcaattaag 29291808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 29292972 - 29292925
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  29292972 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 29292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 33236283 - 33236347
Alignment:
Q  202 gaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaa 266  Q
    |||||| | |||||||||  ||| ||||| |||||| | |||||||||||| |||||||||||||    
T  33236283 gaataagtagggtgtctgttgttcgaaccccaacccctgcatataacaatgtatgtctctgtcaa 33236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 35080223 - 35080263
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaa 185  Q
    |||||||||||||||||||||| |||||||||  |||||||    
T  35080223 ggggtgcaaaatcgcacaattaacaaaagataaggggaaaa 35080263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 37888887 - 37888835
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  37888887 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 37888835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 37888883 - 37888836
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  37888883 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 37888836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 37889259 - 37889311
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  37889259 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 37889311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 37889263 - 37889310
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  37889263 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 37889310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 37972396 - 37972448
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  37972396 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 37972448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 37972400 - 37972447
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  37972400 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 37972447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 38191435 - 38191387
Alignment:
Q  147 ggtgcaaaatcgcacaattagc-aaaagatagagggaaaagtgcaatta 194  Q
    ||||||||||||||||||| || ||||||||| || |||||||||||||    
T  38191435 ggtgcaaaatcgcacaattggcaaaaagataggggaaaaagtgcaatta 38191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 46816311 - 46816363
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    |||||||||||||||| |||| | ||||||||| ||| |||||||||||||||    
T  46816311 ggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaag 46816363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 11007702 - 11007603
Alignment:
Q  32 aaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaatcg 131  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||||||| || |||| ||||||||| ||| ||||| || | |||||||||||    
T  11007702 aaaatcgcacaattggcaaaaagatagggagcaaaagtgcaattaaacacaagaaggttcatctaaccagaaaaggggcaaaagatagtgtgcaaaatcg 11007603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 74740 - 74688
Alignment:
Q  144 aggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  74740 aggggtgcaaaatcgcacaattagcaaaagatggagggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 9930710 - 9930610
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 128  Q
    |||||||||||||||||| ||||| |||||||   |||| |||||||||||||||||| ||| ||| ||| ||||||||| ||||| || ||||||||||    
T  9930710 tgcaaaatcgcacaattgacaaaaatatagggg--aaaaatgcaattaaacacaagaaggtctatctaacaagaaagggggcaaaagatagggtgcaaaa 9930613  T
Q  129 tcg 131  Q
    |||    
T  9930612 tcg 9930610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 16929204 - 16929294
Alignment:
Q  108 gacaaaaaatggggtgcaaaatcgttcnnnnnnnngagggg-tgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||| |||||||||||||||||||        |||||| ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  16929204 gacaaaagatggggtgcaaaatcgttcaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaag 16929294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 13936776 - 13936725
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  13936776 ggggtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaag 13936725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 23123517 - 23123567
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  23123517 ggggtgcaaaatcgcacaattagcaaaagata-aggggaaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 34313817 - 34313767
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  34313817 ggggtgcaaaatcgcacaattaacaaaagatag-gggaaaagtgcaattaag 34313767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 3463826 - 3463997
Alignment:
Q  31 caaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatc---caaccagaaa-ggggacaaaaaatggggtgcaa 126  Q
    ||||||||||||||||||||||  |||||| | ||| |||||||||||||||||||  ||||||   | |||||||| ||||  |||| |||||||||||    
T  3463826 caaaatcgcacaattggcaaaaagataggg-gtaaatgtgcaattaaacacaagaagttccatctaaccaccagaaacggggtaaaaagatggggtgcaa 3463924  T
Q  127 aatcgttc-nnnnnnnngag-gggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||| ||         ||| |||||||| |||||||||||||||||| ||| | ||||||||||||||||||    
T  3463925 aatcgctcaaaacaaaggagagggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaag 3463997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 7127702 - 7127660
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaa 191  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  7127702 tgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 43162285 - 43162236
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  43162285 ggtgcaaaatcgcacaattaacaaaatatagggggaaaagtgcaattaag 43162236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 74865 - 75017
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatc-caaccagaaaggggacaaaaa-atggggtgcaa 126  Q
    |||||||||||||||||| |||||  ||||||  |||||||||||||||||||||  | ||    |  || |||||||||| |||||| |||||||||||    
T  74865 tgcaaaatcgcacaattgacaaaaagataggggacaaaagtgcaattaaacacaaagatgtggtgcaaaatcagaaagggggcaaaaagatggggtgcaa 74964  T
Q  127 aatcgttcnnnnnnnnga-ggggtgcaaaatcgcacaattagcaaaagataga 178  Q
    ||||| |         || ||||||||||||||||||||||||||||||||||    
T  74965 aatcgctaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataga 75017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 765788 - 765736
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  765788 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 9823361 - 9823413
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  9823361 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 9823413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 12281426 - 12281478
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  12281426 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaag 12281478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 15155937 - 15155885
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15155937 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 15155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 16928996 - 16928944
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  16928996 ggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaag 16928944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 37752138 - 37752086
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  37752138 ggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaag 37752086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 37752416 - 37752468
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  37752416 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 37752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 39724048 - 39724100
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  39724048 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 39724100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 41662403 - 41662455
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  41662403 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 41662455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 43245925 - 43245873
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  43245925 ggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaag 43245873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 43246176 - 43246228
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  43246176 ggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaag 43246228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 13027281 - 13027332
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  13027281 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 18020088 - 18020138
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  18020088 ggggtgcaaaatcgcacaattaacaaaagatag-ggtaaaagtgcaattaag 18020138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 22786984 - 22786909
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaa 104  Q
    ||||||||||||||| || ||||   ||| || ||||||||||||||||||||||||| ||| ||| |||||||||    
T  22786984 tgcaaaatcgcacaactgacaaatagataaggggcaaaagtgcaattaaacacaagaaggtctatctaaccagaaa 22786909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 12281176 - 12281126
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  12281176 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 12281126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 13026687 - 13026637
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 13026637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 43162539 - 43162588
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaatta 194  Q
    ||||||||||||||||| |||  |||||||||| ||||||||||||||||    
T  43162539 ggggtgcaaaatcgcacgattgacaaaagatagggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 11007613 - 11007565
Alignment:
Q  148 gtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||  |||||| || |||||||    
T  11007613 gtgcaaaatcgcacaattagcaaaagatagcaggaaaaatgtaattaag 11007565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 15156185 - 15156237
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  ||||||||| | ||||||||||||||||||    
T  15156185 ggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaag 15156237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 22851444 - 22851392
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  |||||||||| || ||||||||||||||||    
T  22851444 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaag 22851392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 23123392 - 23123340
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||| ||||||||||||||  ||||||||| ||||||||||||||||||||    
T  23123392 ggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaag 23123340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 41662161 - 41662109
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaa-gtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||||  ||||||| |||||||||||    
T  41662161 ggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaag 41662109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 177
Target Start/End: Original strand, 43598756 - 43598787
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatag 177  Q
    ||||||||||||||||||||||||||||||||    
T  43598756 gggtgcaaaatcgcacaattagcaaaagatag 43598787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 7127923 - 7127973
Alignment:
Q  146 gggtgcaaaatcgcacaa-ttagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||||||||    
T  7127923 gggtgcaaaatcgcacaaattagcaaaagatagggaaaaaagtgcaattaa 7127973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 9465746 - 9465692
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    |||||||||||||| || ||||||  |||||| |||||||||||||| |||||||    
T  9465746 tgcaaaatcgcacagttagcaaaaagatagggggcaaaagtgcaattgaacacaa 9465692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 9465874 - 9465923
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||||||||||||| |||||||||| || |||| |||||||||    
T  9465874 ggggtgcaaaatcgcacaattaacaaaagatag-ggaaaaaatgcaattaa 9465923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 15156065 - 15156119
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  15156065 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 15156119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 15444651 - 15444700
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 79  Q
    ||||||||||||||||||| ||| |||||||| | ||||||||||||||||    
T  15444651 tgcaaaatcgcacaattggtaaa-ttatagggggaaaaagtgcaattaaac 15444700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 18019961 - 18019907
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| | ||||  |||||| |||||||||||||| |||||||    
T  18019961 tgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaattgaacacaa 18019907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 37752288 - 37752234
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  37752288 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 37752234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 39432344 - 39432410
Alignment:
Q  202 gaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    |||||| |||||||||||| ||| ||||| |||||| | ||||||||| |||||||| ||| |||||    
T  39432344 gaataagtggggtgtctgaggttcgaaccccaacccctgcatataacattgcatgtccctgccaact 39432410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 767720 - 767757
Alignment:
Q  159 cacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  767720 cacaattaacaaaagatagggggaaaagtgcaattaag 767757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 22786892 - 22786843
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaa 195  Q
    ||||||||||| ||||||||| ||||||||| ||| ||||||||||||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaa 22786843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 765784 - 765737
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  765784 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 765737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 3463694 - 3463654
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaa 185  Q
    |||||||||||| ||||||||| |||||||||| |||||||    
T  3463694 ggggtgcaaaattgcacaattaacaaaagatagggggaaaa 3463654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 9822802 - 9822750
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    |||||||||||||||||||||   ||||||||| || ||||||||||||||||    
T  9822802 ggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaag 9822750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 12281174 - 12281127
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  12281174 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 12281127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 25438846 - 25438794
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  25438846 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 25438842 - 25438795
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  25438842 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 25438795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 30500528 - 30500480
Alignment:
Q  221 agtttgaaccacaacccttacatataacaatgcatgtctctgtcaacta 269  Q
    |||| ||||| |||||| ||||||||| |||||||||||||| ||||||    
T  30500528 agttcgaaccccaacccctacatataataatgcatgtctctgccaacta 30500480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 34498555 - 34498607
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  34498555 ggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaag 34498607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 37670256 - 37670307
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaaga 197  Q
    |||||||||||| ||||||||| |||| ||||| | |||||||||||||||||    
T  37670256 ggggtgcaaaattgcacaattaacaaa-gatagggagaaaagtgcaattaaga 37670307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 41662407 - 41662454
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  41662407 tgcaaaatcgcacaattggcaaaa-gataggggggaaaagtgcaattaa 41662454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 23011261 - 23011363
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaa 127  Q
    |||||||||||||||||||| |||  |||||| |||||| |||||||||||||||| | ||||||| ||||||||||||| |||||| |||| |||||||    
T  23011261 tgcaaaatcgcacaattggctaaaagatagggggcaaaattgcaattaaacacaagcacgtccatctaaccagaaagggggcaaaaagatggtgtgcaaa 23011360  T
Q  128 atc 130  Q
    |||    
T  23011361 atc 23011363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 41383088 - 41383218
Alignment:
Q  65 aaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaaatcgttcnnnnnnnngaggggtgcaaaatcgcacaa 163  Q
    ||||||||||||||||||||||  |||||| ||  |||||||||||||||| ||||| ||||||||||  |         ||||||||||||||||||||    
T  41383088 aaagtgcaattaaacacaagaagatccatcaaatgagaaaggggacaaaaagatgggatgcaaaatcg--ctaaaaaaaaaggggtgcaaaatcgcacaa 41383185  T
Q  164 ttagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||| |||| ||||||||| ||||||||    
T  41383186 ttagcaaaaaatagggggaaaagttcaattaag 41383218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 12441196 - 12441362
Alignment:
Q  31 caaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaaaat 129  Q
    |||||||||||||||| |||||  |||||| |||||||||||||||||||||| || || |||| |||  |||||||| |||||| ||||||||||||||    
T  12441196 caaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaaacacaa-aaggttcatctaactggaaagggggcaaaaatatggggtgcaaaat 12441294  T
Q  130 cgttcnnnnnnnngag---gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    || ||         ||   || ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  12441295 cgctcaaaaaaaaaagaatggatgc-aaatcgcacaattagcaaaagatag-gggaaaagtgcaattaag 12441362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 9869742 - 9869827
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaa 114  Q
    ||||||||||||||||||| ||||  | |||| ||||||||||||||||||||| ||| ||||||| ||||| ||||||| |||||    
T  9869742 tgcaaaatcgcacaattggtaaaaagacagggggcaaaagtgcaattaaacacatgaaggtccatctaaccaaaaagggggcaaaa 9869827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 22428987 - 22428936
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  22428987 ggggtgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaag 22428936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 22429196 - 22429247
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  22429196 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaag 22429247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 34577039 - 34576870
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa-gaaagtccatccaaccagaaaggggacaaaaa-atggggtgcaa 126  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||||||||||| ||  |       || |||||||||| |||||| |||||||||||    
T  34577039 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaaagatggggtggaaaatcagaaagggggcaaaaagatggggtgcaa 34576940  T
Q  127 aatcgttcnnnnnnnnga-ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||| ||        || |||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  34576939 aatcgctcaaaaaaaagatggggtgtaaaatcgcacaattagcaaaagataggggggaaagtgcaattaa 34576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 18433069 - 18433017
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  18433069 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 18433017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 26020504 - 26020452
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  26020504 ggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaag 26020452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 34577164 - 34577215
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||||    
T  34577164 ggggtgcaaaatcacacaattagcaaaagataggggaaaaagtgcaattaag 34577215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 9665609 - 9665560
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  9665609 ggggtgcaaaattgcacaattagcaaaagatag-gggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 23011131 - 23011081
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaatgcaattaag 23011081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 18433316 - 18433368
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  18433316 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 18433368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 18817611 - 18817663
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  18817611 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 18817663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 25116061 - 25116113
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  25116061 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 25116113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 25175151 - 25175203
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  25175151 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 25175203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 31569958 - 31569910
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagatagggggaaaagtgcaattaa 31569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 11351427 - 11351478
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  11351427 ggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaa 11351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 22729440 - 22729491
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  22729440 ggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaag 22729491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 9665828 - 9665877
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  9665828 gggtgcaaaat-gcacaattagcaaaagatagggggaaaagtggaattaag 9665877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 25115931 - 25115877
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||| ||| || |||||||||||||| |||||||    
T  25115931 tgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaa 25115877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 25175023 - 25174969
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||| ||| || |||||||||||||| |||||||    
T  25175023 tgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaa 25174969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 23011383 - 23011432
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| |||||||||  || ||||||||||||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagataagggaaaaagtgcaattaa 23011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 41382945 - 41382896
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| |||||||||| ||| ||| |||||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaatgcaattaa 41382896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 16466746 - 16466794
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaag 16466794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 18817006 - 18816954
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||||    
T  18817006 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 18816954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 25115811 - 25115759
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||| |||||||||| | ||||||||||||||||||    
T  25115811 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaag 25115759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 25174903 - 25174851
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||| |||||||||| | ||||||||||||||||||    
T  25174903 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaag 25174851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 16726130 - 16726079
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaaga 197  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||    
T  16726130 ggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaatcaaga 16726079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 268
Target Start/End: Complemental strand, 17557113 - 17557043
Alignment:
Q  197 aaggagaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaact 268  Q
    |||| |||||| ||||||||| |  ||||||||| | |||| |||||||||||||||||||||||| |||||    
T  17557113 aaggtgaataagtggggtgtccgg-gtttgaaccccgacccctacatataacaatgcatgtctctgccaact 17557043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 37610255 - 37610204
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||| |||||  |||| ||||||||||||||||||    
T  37610255 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaag 37610204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 37780373 - 37780322
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||| |||||  |||| ||||||||||||||||||    
T  37780373 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaag 37780322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 2817199 - 2817150
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 79  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  2817199 tgcaaaatcgcacaattggc-aaactatagggaggaaaagtgcaattaaac 2817150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 18433189 - 18433135
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  18433189 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 18433135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 21207276 - 21207227
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 79  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  21207276 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaaac 21207227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 43463809 - 43463759
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||| |||||  |||  |||||||||||||||||    
T  43463809 ggggtgcaaaatcgcacaattggcaaactataaggggaaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 9869611 - 9869563
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||||||||||||||||||||| |  || ||||||||||||||||    
T  9869611 gggtgcaaaatcgcacaattagcaaaataggga-ggaaaagtgcaattaa 9869563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 16726128 - 16726084
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaat 74  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||    
T  16726128 tgcaaaatcgcacaattggcaaaa-gatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 27278761 - 27278822
Alignment:
Q  193 taagaaggagaataaatggggtgtctgaagtttgaaccacaacccttacatataacaatgca 254  Q
    |||||| | ||||||||||||||||||| ||| ||||| | |||| ||||||||| ||||||    
T  27278761 taagaaagtgaataaatggggtgtctgaggttcgaaccccgacccctacatataataatgca 27278822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 31292601 - 31292544
Alignment:
Q  209 tggggtgtctgaagtttgaaccacaacccttacatataacaatgcatgtctctgtcaa 266  Q
    ||||||||||| |||||||||| || | | | |||||||||||||||||| |||||||    
T  31292601 tggggtgtctggagtttgaaccccagctcctgcatataacaatgcatgtccctgtcaa 31292544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 37610620 - 37610669
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||  |||| ||| ||||| ||||||||    
T  37610620 ggtgcaaaatcgcacaattagcaaactataggggggaaagtacaattaag 37610669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 43464194 - 43464243
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaag 43464243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 2817582 - 2817626
Alignment:
Q  152 aaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||| |||||  |||| ||||||||||||||||||    
T  2817582 aaaatcgcacaattcgcaaactatagggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 5187830 - 5187882
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaag 196  Q
    |||||||||||| ||||||||| |||||||| || || |||||||||||||||    
T  5187830 ggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaag 5187882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 12498621 - 12498569
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  12498621 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 12498569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 12498617 - 12498570
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  12498617 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 12498570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 12498928 - 12498980
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  12498928 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 12498980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 12498932 - 12498979
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  12498932 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 12498979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 16466746 - 16466793
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||| |||||| ||||||| | ||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaa-tataggggggaaaagtgcaattaa 16466793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 22729058 - 22729010
Alignment:
Q  148 gtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  22729058 gtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaag 22729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 22729444 - 22729490
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  22729444 tgcaaaatcgcacaattggc-aaattataggg-ggaaaagtgcaattaa 22729490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 26571164 - 26571216
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  ||| | ||||||||||||||||||    
T  26571164 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 26571216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 26571168 - 26571215
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  26571168 tgcaaaatcgcacaattggc-aaactataggggggaaaagtgcaattaa 26571215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 51; Significance: 4e-20; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 183544 - 183646
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 128  Q
    ||||||||||||||||||| ||||  |||||| |||||||||||||||||||||||||  | |||| ||||| ||||||| ||||||   ||||||||||    
T  183544 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaacacaagaagtttcatctaaccataaagggggcaaaaagatgggtgcaaaa 183643  T
Q  129 tcg 131  Q
    |||    
T  183644 tcg 183646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 438984 - 438932
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  438984 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 438932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 183416 - 183367
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    ||||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagatagggggaaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 439203 - 439251
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagat-agagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||    
T  439203 tgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaag 439251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 183663 - 183714
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||| ||||||||||||||||| ||| | ||||||||||||||||||    
T  183663 ggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgcaattaag 183714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 6697 - 6748
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6697 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaag 6748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 6448 - 6396
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  6448 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 6577 - 6631
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  6577 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 6631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 73137 - 72968
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaagaaagtccatccaaccagaaaggggacaaaaaatggggtgcaaaa 128  Q
    |||||||||||||| ||| |||||  ||||||  |||||||||||||||||| ||||  ||||||| |||||||| || | ||||| |||| ||||||||    
T  73137 tgcaaaatcgcacagttgacaaaaagataggggacaaaagtgcaattaaacataagatggtccatctaaccagaatggcggcaaaagatggagtgcaaaa 73038  T
Q  129 tcgttcnnnnnnnngagg-ggtgcaaaatcgcacaattagcaaaagataga-gggaaaagtgcaattaag 196  Q
    ||  |         |||| |||||||||| ||||||||||||||||||| | ||||||| ||||||||||    
T  73037 tcacttaaaaaaaagaggcggtgcaaaattgcacaattagcaaaagataaaggggaaaaatgcaattaag 72968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 45807 - 45858
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  45807 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 45858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 45587 - 45539
Alignment:
Q  148 gtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  45587 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaag 45539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 17158 - 17207
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  17158 ggtgcaaaattgcacaattagcaaaagatagggggaaaagtgcaattaag 17207  T

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Target: scaffold0015; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 16905 - 16855
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||| |||||||||||||||||||||||| |||||||  |||||||||    
T  16905 ggggtgcataatcgcacaattagcaaaagatag-gggaaaaaggcaattaag 16855  T

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Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 6206 - 6154
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  6206 ggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaag 6154  T

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Target: scaffold0328; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 6795 - 6847
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagg-gaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||||    
T  6795 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 6847  T

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Target: scaffold0192 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 25369 - 25421
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagata-gagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  25369 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 25421  T

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Target: scaffold0192; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 25249 - 25303
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  25249 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 25303  T

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Target: scaffold1221 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 1564 - 1513
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  1564 ggggtgcaaaatcacacaattggcaaaagatagaggaaaaagtgcaattaag 1513  T

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Target: scaffold1221; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 1786 - 1834
Alignment:
Q  147 ggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaa 195  Q
    |||||||||||||||||| | |||||||||| |||||||||||||||||    
T  1786 ggtgcaaaatcgcacaataaacaaaagatagggggaaaagtgcaattaa 1834  T

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Target: scaffold0376 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 7508 - 7457
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  7508 ggggtgcaaaatcgcataattagcaaaagataggggaaaaagtgcaattaag 7457  T

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Target: scaffold0376; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 7600 - 7651
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||||||    
T  7600 ggggtacaaaatcgcacaattagcaaaagataggggaaaaagtgcaattaag 7651  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 205740 - 205689
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  205740 ggggtgcaaaatcgcacaattagcaaaagatagggagaaaaatgcaattaag 205689  T

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Target: scaffold0802 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 1172 - 1120
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  1172 ggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaag 1120  T

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Target: scaffold0802; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 1420 - 1472
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  1420 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaag 1472  T

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Target: scaffold0802; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 1300 - 1354
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    ||||||||||||||||| ||||||  ||| || |||||||||||||| |||||||    
T  1300 tgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaa 1354  T

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Target: scaffold0802; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 1424 - 1471
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  1424 tgcaaaatcgcacaattggcaaaa-gatagggggaaaaagtgcaattaa 1471  T

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Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 50507 - 50558
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  50507 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 50558  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 411976 - 411925
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    |||||||||||||||||||||  |||||||||| ||| ||||||||||||||    
T  411976 ggggtgcaaaatcgcacaattgacaaaagatagggggtaaagtgcaattaag 411925  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 412090 - 412041
Alignment:
Q  34 aatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaacacaa 83  Q
    |||||||||||| ||||||  |||||| |||||||||||||| |||||||    
T  412090 aatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaa 412041  T

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Target: scaffold0460 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 763 - 814
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| || |||||||||||||||    
T  763 ggggtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaag 814  T

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Target: scaffold0598 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 6877 - 6926
Alignment:
Q  146 gggtgcaaaatcgcacaattagcaaaagatagagggaaaagtgcaattaag 196  Q
    ||||||||||| |||||||| ||||||||||| ||| ||||||||||||||    
T  6877 gggtgcaaaat-gcacaattggcaaaagataggggggaaagtgcaattaag 6926  T

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Target: scaffold0535 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 10062 - 10014
Alignment:
Q  149 tgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    |||||||||| |||||| ||||||||||| ||| |||||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaag 10014  T

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Target: scaffold0535; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 10062 - 10015
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||| |||||||||||||  |||||| ||||||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaa-gatagggggcaaaagtgcaattaa 10015  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 38695 - 38747
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagaggg-aaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| ||| |||||||||||||||    
T  38695 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 38747  T

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Target: scaffold0041; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 38699 - 38746
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  38699 tgcaaaatcgcacaattggc-aaactatagggggaaaaagtgcaattaa 38746  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 185274 - 185326
Alignment:
Q  145 ggggtgcaaaatcgcacaattagcaaaagatagag-ggaaaagtgcaattaag 196  Q
    ||||||||||||||||||||| |||||  |||| | |||||||||||||||||    
T  185274 ggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaag 185326  T

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Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 185278 - 185325
Alignment:
Q  29 tgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 77  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  185278 tgcaaaatcgcacaattggc-aaactatagggaggaaaagtgcaattaa 185325  T

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