View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20494_high_11 (Length: 228)
Name: NF20494_high_11
Description: NF20494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20494_high_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 94 - 228
Target Start/End: Original strand, 8153927 - 8154058
Alignment:
| Q |
94 |
tattccaagattctcgaaacggcagggcaatctaataaaaataaagttatttcaaatggaagtattcaaaagacacaaatgctacagcttgtaactgtaa |
193 |
Q |
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| T |
8153927 |
tattccaagattctcgaaacggcagggcaatctattaaaaataaagttatttcaaatggaagtattcaaaagacacaaatgctacagcttgtaactgt-- |
8154024 |
T |
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| Q |
194 |
caactatattggtcgagtaatgtgaagtcaatgta |
228 |
Q |
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| T |
8154025 |
-aactatattggtcgagtaatgtgaagtcaatgta |
8154058 |
T |
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