View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20494_low_1 (Length: 411)

Name: NF20494_low_1
Description: NF20494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20494_low_1
NF20494_low_1
[»] chr2 (47 HSPs)
chr2 (321-391)||(31266350-31266420)
chr2 (321-391)||(41637614-41637684)
chr2 (321-391)||(29749472-29749542)
chr2 (321-391)||(30783334-30783404)
chr2 (321-391)||(27523007-27523077)
chr2 (321-391)||(28841411-28841481)
chr2 (321-390)||(23388448-23388517)
chr2 (321-390)||(32300447-32300516)
chr2 (321-392)||(18916468-18916539)
chr2 (321-391)||(13788124-13788194)
chr2 (333-391)||(14757190-14757248)
chr2 (321-387)||(18551326-18551392)
chr2 (321-391)||(32008948-32009018)
chr2 (321-390)||(1141532-1141601)
chr2 (321-390)||(15636805-15636874)
chr2 (325-386)||(27327616-27327677)
chr2 (321-390)||(28262360-28262429)
chr2 (321-390)||(32185828-32185897)
chr2 (326-390)||(28319649-28319713)
chr2 (321-393)||(37724059-37724131)
chr2 (334-393)||(13613160-13613219)
chr2 (333-392)||(36550844-36550903)
chr2 (321-392)||(37802446-37802517)
chr2 (321-383)||(8430292-8430354)
chr2 (321-391)||(26687760-26687830)
chr2 (321-387)||(41736168-41736234)
chr2 (321-390)||(20065144-20065213)
chr2 (321-390)||(21293781-21293850)
chr2 (321-390)||(22140434-22140503)
chr2 (327-392)||(35697458-35697522)
chr2 (330-391)||(43408580-43408641)
chr2 (323-388)||(44722930-44722995)
chr2 (331-393)||(37552233-37552295)
chr2 (321-391)||(40018798-40018868)
chr2 (321-386)||(29998633-29998698)
chr2 (331-391)||(12779606-12779666)
chr2 (331-391)||(23858026-23858086)
chr2 (330-392)||(7093573-7093635)
chr2 (321-383)||(8763630-8763692)
chr2 (321-391)||(44366066-44366136)
chr2 (353-391)||(44476444-44476482)
chr2 (321-368)||(22192188-22192235)
chr2 (321-387)||(9590466-9590532)
chr2 (321-387)||(18609510-18609576)
chr2 (353-391)||(26243390-26243428)
chr2 (321-374)||(24117315-24117368)
chr2 (321-369)||(27058407-27058455)
[»] chr8 (53 HSPs)
chr8 (321-393)||(17103932-17104004)
chr8 (321-393)||(17824683-17824755)
chr8 (321-393)||(37992097-37992169)
chr8 (321-391)||(24576093-24576163)
chr8 (321-393)||(3823131-3823203)
chr8 (321-393)||(8555371-8555443)
chr8 (321-391)||(17810296-17810366)
chr8 (321-390)||(29350921-29350990)
chr8 (333-393)||(27869248-27869308)
chr8 (321-391)||(6816452-6816522)
chr8 (321-387)||(18010133-18010199)
chr8 (321-391)||(33652565-33652635)
chr8 (321-390)||(4330976-4331045)
chr8 (321-390)||(24193266-24193335)
chr8 (330-391)||(26399076-26399137)
chr8 (331-391)||(5670238-5670298)
chr8 (331-391)||(11938753-11938813)
chr8 (331-391)||(19256220-19256280)
chr8 (330-393)||(19493722-19493786)
chr8 (330-390)||(32247916-32247976)
chr8 (333-388)||(22939323-22939378)
chr8 (321-384)||(27910840-27910903)
chr8 (321-384)||(27957259-27957322)
chr8 (330-388)||(13061003-13061061)
chr8 (321-391)||(19240865-19240935)
chr8 (321-391)||(19314049-19314119)
chr8 (321-391)||(21350476-21350546)
chr8 (321-391)||(40289490-40289559)
chr8 (321-391)||(43431628-43431698)
chr8 (330-391)||(19488130-19488191)
chr8 (324-385)||(29345072-29345133)
chr8 (331-387)||(24636660-24636716)
chr8 (330-390)||(31399578-31399638)
chr8 (321-388)||(4647827-4647894)
chr8 (321-388)||(9915112-9915179)
chr8 (321-392)||(15251601-15251671)
chr8 (321-392)||(18844612-18844683)
chr8 (330-393)||(25273394-25273457)
chr8 (321-391)||(5879202-5879272)
chr8 (321-391)||(6817052-6817122)
chr8 (353-391)||(30687966-30688004)
chr8 (321-391)||(32961657-32961727)
chr8 (352-392)||(21219308-21219348)
chr8 (331-391)||(30467023-30467083)
chr8 (356-391)||(8789873-8789908)
chr8 (353-388)||(8824855-8824890)
chr8 (330-385)||(10917834-10917889)
chr8 (335-386)||(33413044-33413095)
chr8 (353-391)||(23752355-23752393)
chr8 (340-390)||(25655928-25655978)
chr8 (321-387)||(31344245-31344311)
chr8 (321-390)||(16062009-16062078)
chr8 (331-388)||(25000503-25000560)
[»] chr7 (58 HSPs)
chr7 (321-393)||(40847502-40847574)
chr7 (321-391)||(36636506-36636576)
chr7 (321-393)||(816258-816330)
chr7 (321-393)||(1907355-1907427)
chr7 (321-393)||(24605838-24605910)
chr7 (321-393)||(47523717-47523789)
chr7 (321-391)||(28800878-28800948)
chr7 (321-391)||(39979693-39979763)
chr7 (321-393)||(2457670-2457742)
chr7 (321-393)||(23232039-23232111)
chr7 (321-388)||(15014477-15014544)
chr7 (321-391)||(10050905-10050975)
chr7 (321-391)||(22486394-22486464)
chr7 (321-391)||(23577258-23577328)
chr7 (321-391)||(27806018-27806088)
chr7 (321-390)||(11036507-11036576)
chr7 (321-390)||(20174020-20174089)
chr7 (321-390)||(31425581-31425650)
chr7 (321-393)||(22501594-22501666)
chr7 (321-388)||(42926492-42926559)
chr7 (321-391)||(7733381-7733451)
chr7 (321-391)||(20924027-20924097)
chr7 (321-391)||(21917403-21917473)
chr7 (321-391)||(31042251-31042321)
chr7 (325-391)||(38057636-38057702)
chr7 (321-390)||(20429465-20429534)
chr7 (330-391)||(26577274-26577335)
chr7 (321-390)||(37135355-37135424)
chr7 (333-393)||(15969796-15969856)
chr7 (330-393)||(4514774-4514837)
chr7 (325-391)||(1842898-1842964)
chr7 (321-391)||(18217829-18217899)
chr7 (321-391)||(23750805-23750875)
chr7 (335-393)||(33427704-33427762)
chr7 (321-387)||(45664768-45664834)
chr7 (330-391)||(1824269-1824330)
chr7 (330-391)||(3904547-3904608)
chr7 (321-393)||(11890214-11890286)
chr7 (321-393)||(24140450-24140522)
chr7 (334-393)||(11852021-11852080)
chr7 (324-387)||(32267350-32267413)
chr7 (340-390)||(2650898-2650948)
chr7 (321-383)||(9698615-9698677)
chr7 (321-390)||(48933136-48933205)
chr7 (331-391)||(21623031-21623091)
chr7 (321-388)||(6849283-6849350)
chr7 (321-388)||(36993820-36993887)
chr7 (330-391)||(3872256-3872317)
chr7 (331-392)||(14786703-14786764)
chr7 (321-391)||(21871572-21871638)
chr7 (321-390)||(23699895-23699964)
chr7 (352-388)||(23539263-23539299)
chr7 (355-391)||(27304904-27304940)
chr7 (321-392)||(10222697-10222768)
chr7 (325-392)||(25777180-25777247)
chr7 (330-392)||(2093430-2093492)
chr7 (352-380)||(5235420-5235448)
chr7 (359-391)||(15330274-15330306)
[»] chr5 (53 HSPs)
chr5 (321-393)||(27428079-27428151)
chr5 (321-391)||(33818630-33818700)
chr5 (321-391)||(618294-618364)
chr5 (330-393)||(25397855-25397918)
chr5 (321-391)||(10420321-10420391)
chr5 (321-391)||(16121908-16121978)
chr5 (321-391)||(17039700-17039770)
chr5 (321-391)||(17079405-17079475)
chr5 (321-391)||(23423825-23423895)
chr5 (321-391)||(33816827-33816897)
chr5 (321-390)||(23975635-23975704)
chr5 (321-393)||(25673295-25673367)
chr5 (333-391)||(2472783-2472841)
chr5 (325-391)||(5982649-5982715)
chr5 (321-391)||(7888797-7888867)
chr5 (321-391)||(8886920-8886990)
chr5 (321-387)||(12328299-12328365)
chr5 (321-391)||(13620196-13620266)
chr5 (321-387)||(23408980-23409046)
chr5 (333-391)||(35620412-35620470)
chr5 (330-391)||(746937-746998)
chr5 (321-390)||(8108930-8108999)
chr5 (321-390)||(15060973-15061042)
chr5 (321-390)||(36196394-36196463)
chr5 (321-388)||(11927858-11927925)
chr5 (321-388)||(17986729-17986796)
chr5 (321-388)||(20959508-20959575)
chr5 (321-391)||(12045727-12045797)
chr5 (330-391)||(10494746-10494807)
chr5 (330-391)||(40484053-40484114)
chr5 (331-391)||(24138910-24138970)
chr5 (331-391)||(26708654-26708714)
chr5 (331-391)||(26978388-26978448)
chr5 (332-391)||(17036481-17036540)
chr5 (340-390)||(31853158-31853208)
chr5 (321-391)||(32726795-32726865)
chr5 (321-391)||(36831959-36832029)
chr5 (321-382)||(13974156-13974217)
chr5 (330-387)||(17772041-17772098)
chr5 (353-390)||(28265545-28265582)
chr5 (321-378)||(29727928-29727985)
chr5 (321-390)||(36716270-36716339)
chr5 (330-391)||(38837740-38837801)
chr5 (321-393)||(3080763-3080835)
chr5 (330-390)||(4125258-4125318)
chr5 (324-388)||(25652655-25652719)
chr5 (321-387)||(7003803-7003867)
chr5 (353-391)||(16631943-16631981)
chr5 (345-391)||(33735042-33735088)
chr5 (330-391)||(36597409-36597470)
chr5 (331-383)||(22649406-22649458)
chr5 (330-391)||(35778150-35778211)
chr5 (330-378)||(16464687-16464735)
[»] chr4 (55 HSPs)
chr4 (321-393)||(25147719-25147791)
chr4 (321-393)||(1638445-1638517)
chr4 (321-392)||(33914057-33914128)
chr4 (321-391)||(5399607-5399677)
chr4 (321-391)||(22156670-22156740)
chr4 (321-390)||(37378693-37378762)
chr4 (325-390)||(37761912-37761977)
chr4 (321-387)||(2275751-2275817)
chr4 (321-391)||(5473847-5473917)
chr4 (321-391)||(8878881-8878951)
chr4 (321-391)||(19839177-19839247)
chr4 (321-391)||(22128381-22128451)
chr4 (321-391)||(32175806-32175876)
chr4 (321-391)||(55309282-55309352)
chr4 (321-390)||(27040095-27040164)
chr4 (321-390)||(46286299-46286368)
chr4 (321-389)||(18051837-18051905)
chr4 (321-392)||(30269056-30269127)
chr4 (321-392)||(30283062-30283133)
chr4 (321-392)||(36689675-36689746)
chr4 (321-391)||(22168266-22168336)
chr4 (331-391)||(13028885-13028945)
chr4 (340-391)||(9059021-9059072)
chr4 (324-391)||(9913259-9913326)
chr4 (324-391)||(38223511-38223578)
chr4 (321-387)||(12071960-12072026)
chr4 (321-383)||(18744147-18744209)
chr4 (330-388)||(29625332-29625390)
chr4 (321-387)||(45532652-45532718)
chr4 (330-391)||(14944753-14944814)
chr4 (325-390)||(19680494-19680559)
chr4 (330-393)||(12105990-12106052)
chr4 (330-393)||(38619854-38619917)
chr4 (330-393)||(38645757-38645820)
chr4 (321-383)||(13564992-13565054)
chr4 (321-391)||(16915367-16915437)
chr4 (353-391)||(30508017-30508055)
chr4 (330-391)||(9239350-9239411)
chr4 (330-391)||(9670548-9670609)
chr4 (331-388)||(25026565-25026622)
chr4 (331-383)||(4586835-4586887)
chr4 (331-387)||(45091282-45091338)
chr4 (333-391)||(44783492-44783551)
chr4 (353-391)||(18714932-18714970)
chr4 (340-393)||(313604-313657)
chr4 (330-391)||(4606898-4606959)
chr4 (330-391)||(6553811-6553872)
chr4 (341-390)||(24682397-24682446)
chr4 (359-391)||(9238694-9238726)
chr4 (321-380)||(30420113-30420172)
chr4 (321-391)||(3612993-3613063)
chr4 (353-391)||(7112015-7112053)
chr4 (321-390)||(30568069-30568138)
chr4 (331-388)||(54539294-54539351)
chr4 (321-392)||(39234940-39235009)
[»] chr1 (70 HSPs)
chr1 (321-393)||(18894967-18895039)
chr1 (321-391)||(50845399-50845469)
chr1 (321-393)||(14760867-14760939)
chr1 (321-391)||(6459217-6459287)
chr1 (321-391)||(9110044-9110114)
chr1 (321-391)||(12720809-12720879)
chr1 (321-391)||(41752433-41752503)
chr1 (321-391)||(45839292-45839362)
chr1 (321-393)||(13523028-13523100)
chr1 (321-393)||(41071902-41071974)
chr1 (321-391)||(6412122-6412192)
chr1 (321-391)||(7830031-7830101)
chr1 (321-390)||(9464103-9464172)
chr1 (321-390)||(12161814-12161883)
chr1 (330-391)||(19865253-19865314)
chr1 (321-390)||(22158802-22158871)
chr1 (321-390)||(23457897-23457966)
chr1 (321-390)||(52183678-52183747)
chr1 (321-393)||(12370008-12370080)
chr1 (321-393)||(14486699-14486771)
chr1 (321-393)||(41063197-41063269)
chr1 (321-391)||(13102316-13102386)
chr1 (321-387)||(15243085-15243151)
chr1 (321-390)||(9259253-9259322)
chr1 (323-388)||(12174838-12174903)
chr1 (321-390)||(20408230-20408299)
chr1 (331-391)||(4340417-4340477)
chr1 (321-393)||(22603548-22603620)
chr1 (331-391)||(41120806-41120866)
chr1 (330-393)||(41358996-41359060)
chr1 (321-388)||(16913649-16913716)
chr1 (321-388)||(29549418-29549485)
chr1 (321-388)||(38531242-38531309)
chr1 (321-391)||(16258555-16258625)
chr1 (321-391)||(19081728-19081798)
chr1 (321-391)||(19129616-19129686)
chr1 (321-390)||(7181625-7181694)
chr1 (321-390)||(17661050-17661119)
chr1 (321-390)||(18890619-18890688)
chr1 (321-390)||(22789661-22789730)
chr1 (331-384)||(50092374-50092427)
chr1 (331-391)||(46786027-46786087)
chr1 (321-392)||(11917786-11917857)
chr1 (341-388)||(46339517-46339564)
chr1 (321-392)||(48522518-48522589)
chr1 (352-390)||(25788067-25788105)
chr1 (321-391)||(30928447-30928517)
chr1 (321-391)||(32046876-32046946)
chr1 (330-391)||(13308889-13308950)
chr1 (330-391)||(28229524-28229585)
chr1 (321-393)||(9985394-9985466)
chr1 (321-391)||(17734022-17734093)
chr1 (334-393)||(26825253-26825312)
chr1 (330-393)||(46790009-46790072)
chr1 (321-391)||(12989852-12989922)
chr1 (324-386)||(13195586-13195648)
chr1 (321-391)||(17200079-17200149)
chr1 (329-383)||(30673502-30673556)
chr1 (330-392)||(39748942-39749004)
chr1 (321-391)||(46865243-46865313)
chr1 (321-383)||(52621154-52621216)
chr1 (330-387)||(9882110-9882167)
chr1 (325-390)||(51973428-51973493)
chr1 (331-391)||(9177110-9177170)
chr1 (352-391)||(12806906-12806945)
chr1 (321-388)||(20580909-20580976)
chr1 (331-385)||(25687355-25687409)
chr1 (360-390)||(27253925-27253955)
chr1 (330-391)||(49881053-49881114)
chr1 (321-392)||(18787980-18788049)
[»] scaffold0058 (1 HSPs)
scaffold0058 (321-391)||(74610-74680)
[»] scaffold0047 (1 HSPs)
scaffold0047 (321-391)||(58582-58652)
[»] chr3 (84 HSPs)
chr3 (322-391)||(19610335-19610404)
chr3 (321-392)||(30219334-30219405)
chr3 (321-388)||(49915447-49915514)
chr3 (321-391)||(16299857-16299927)
chr3 (321-391)||(29215988-29216058)
chr3 (321-390)||(18104600-18104669)
chr3 (321-393)||(25882566-25882638)
chr3 (321-393)||(27449084-27449156)
chr3 (321-393)||(36543745-36543817)
chr3 (321-392)||(18091615-18091686)
chr3 (321-391)||(11007752-11007822)
chr3 (321-391)||(11915754-11915824)
chr3 (324-390)||(23217278-23217344)
chr3 (321-391)||(28389969-28390039)
chr3 (321-390)||(17582371-17582440)
chr3 (321-390)||(18539800-18539869)
chr3 (330-391)||(26098818-26098879)
chr3 (321-390)||(26830512-26830581)
chr3 (321-389)||(4393421-4393489)
chr3 (321-393)||(7623598-7623670)
chr3 (321-388)||(9652574-9652641)
chr3 (321-388)||(11219134-11219201)
chr3 (324-391)||(31250087-31250154)
chr3 (321-391)||(5260933-5261003)
chr3 (321-391)||(8428167-8428237)
chr3 (321-391)||(17762638-17762708)
chr3 (321-391)||(19063958-19064028)
chr3 (321-391)||(19269933-19270003)
chr3 (321-391)||(19545506-19545576)
chr3 (321-391)||(27968911-27968981)
chr3 (322-391)||(1311028-1311097)
chr3 (137-278)||(4704074-4704215)
chr3 (321-390)||(8543465-8543534)
chr3 (330-391)||(13921330-13921391)
chr3 (330-391)||(15064061-15064122)
chr3 (321-393)||(11085409-11085481)
chr3 (321-393)||(27212848-27212920)
chr3 (331-391)||(29236050-29236110)
chr3 (321-393)||(36564506-36564578)
chr3 (331-391)||(48404866-48404926)
chr3 (321-388)||(1628211-1628278)
chr3 (340-391)||(10941734-10941785)
chr3 (324-391)||(46942486-46942553)
chr3 (330-393)||(50665703-50665766)
chr3 (330-388)||(5744421-5744479)
chr3 (330-388)||(5781380-5781438)
chr3 (335-393)||(11837281-11837339)
chr3 (321-391)||(19223445-19223515)
chr3 (321-391)||(26390703-26390773)
chr3 (330-392)||(27711236-27711298)
chr3 (330-391)||(13905107-13905168)
chr3 (330-391)||(21088757-21088818)
chr3 (244-293)||(23255485-23255534)
chr3 (330-391)||(23773482-23773543)
chr3 (331-391)||(21816727-21816787)
chr3 (331-391)||(27182725-27182785)
chr3 (330-393)||(17269671-17269734)
chr3 (340-390)||(6718725-6718775)
chr3 (321-391)||(8110335-8110405)
chr3 (330-388)||(10772126-10772184)
chr3 (331-393)||(20088406-20088468)
chr3 (321-391)||(21020061-21020131)
chr3 (321-387)||(29704105-29704171)
chr3 (321-391)||(31433733-31433803)
chr3 (330-391)||(1745556-1745617)
chr3 (330-391)||(5565727-5565788)
chr3 (330-391)||(28859596-28859657)
chr3 (325-390)||(29956372-29956437)
chr3 (325-390)||(30005527-30005592)
chr3 (330-387)||(46012801-46012858)
chr3 (330-394)||(23233229-23233293)
chr3 (352-387)||(8546272-8546307)
chr3 (321-392)||(15490031-15490101)
chr3 (321-392)||(20615411-20615482)
chr3 (21-59)||(4703060-4703098)
chr3 (321-391)||(10803716-10803786)
chr3 (353-391)||(21490103-21490141)
chr3 (330-387)||(3461383-3461440)
chr3 (331-380)||(35579605-35579654)
chr3 (352-383)||(37283550-37283581)
chr3 (321-383)||(18380020-18380082)
chr3 (331-385)||(29451100-29451154)
chr3 (353-391)||(43329832-43329870)
chr3 (325-394)||(26963315-26963384)
[»] chr6 (69 HSPs)
chr6 (321-393)||(12845003-12845075)
chr6 (321-393)||(14886561-14886633)
chr6 (321-391)||(2992615-2992685)
chr6 (321-391)||(9892963-9893033)
chr6 (321-391)||(12951708-12951778)
chr6 (321-391)||(18033594-18033664)
chr6 (321-391)||(22083838-22083908)
chr6 (321-393)||(28364911-28364983)
chr6 (321-391)||(6598464-6598534)
chr6 (321-383)||(11530225-11530287)
chr6 (321-391)||(21990243-21990313)
chr6 (321-391)||(25398002-25398072)
chr6 (333-391)||(26939599-26939657)
chr6 (321-390)||(21140939-21141008)
chr6 (321-390)||(22579419-22579488)
chr6 (321-390)||(27705422-27705491)
chr6 (321-385)||(27796909-27796973)
chr6 (321-391)||(495696-495766)
chr6 (333-391)||(11049820-11049878)
chr6 (321-391)||(15364527-15364597)
chr6 (321-387)||(20182145-20182211)
chr6 (321-387)||(22153780-22153846)
chr6 (321-391)||(24661078-24661148)
chr6 (333-391)||(26224440-26224498)
chr6 (330-391)||(11077658-11077719)
chr6 (321-390)||(23281786-23281855)
chr6 (321-393)||(12680251-12680323)
chr6 (321-393)||(21691563-21691635)
chr6 (321-392)||(1939310-1939381)
chr6 (321-391)||(9885243-9885313)
chr6 (321-383)||(12160923-12160985)
chr6 (321-391)||(12200694-12200764)
chr6 (330-384)||(14872128-14872182)
chr6 (321-391)||(18048788-18048858)
chr6 (333-391)||(33250777-33250835)
chr6 (321-392)||(343631-343702)
chr6 (330-393)||(5192256-5192319)
chr6 (344-391)||(6978300-6978347)
chr6 (321-392)||(9060091-9060161)
chr6 (321-388)||(12351658-12351725)
chr6 (330-393)||(33547555-33547618)
chr6 (321-391)||(2669309-2669379)
chr6 (330-392)||(5360418-5360480)
chr6 (330-388)||(6605568-6605626)
chr6 (330-392)||(12499225-12499287)
chr6 (330-392)||(12506554-12506616)
chr6 (330-392)||(12509614-12509676)
chr6 (321-387)||(14036620-14036686)
chr6 (353-391)||(17919568-17919606)
chr6 (330-392)||(20692879-20692941)
chr6 (330-391)||(13145011-13145072)
chr6 (341-390)||(18492389-18492438)
chr6 (321-385)||(11431715-11431779)
chr6 (331-387)||(15448395-15448451)
chr6 (321-392)||(5270392-5270463)
chr6 (322-393)||(12157443-12157514)
chr6 (324-383)||(12205262-12205321)
chr6 (321-392)||(30834028-30834099)
chr6 (335-393)||(6065451-6065509)
chr6 (352-390)||(15509187-15509225)
chr6 (321-387)||(16118146-16118212)
chr6 (321-387)||(16250875-16250941)
chr6 (353-391)||(19175846-19175884)
chr6 (321-391)||(22055681-22055751)
chr6 (330-387)||(11350191-11350248)
chr6 (352-391)||(14772692-14772731)
chr6 (330-387)||(15961480-15961537)
chr6 (360-392)||(3673201-3673233)
chr6 (340-388)||(10929569-10929617)
[»] scaffold0717 (1 HSPs)
scaffold0717 (321-391)||(988-1058)
[»] scaffold0219 (1 HSPs)
scaffold0219 (321-391)||(19603-19673)
[»] scaffold0001 (3 HSPs)
scaffold0001 (321-391)||(8179-8249)
scaffold0001 (321-391)||(21911-21981)
scaffold0001 (321-390)||(84303-84372)
[»] scaffold0087 (1 HSPs)
scaffold0087 (321-390)||(37857-37926)
[»] scaffold0599 (1 HSPs)
scaffold0599 (321-391)||(7505-7575)
[»] scaffold0069 (1 HSPs)
scaffold0069 (321-387)||(10158-10224)
[»] scaffold0007 (3 HSPs)
scaffold0007 (321-391)||(202774-202844)
scaffold0007 (325-391)||(3746-3812)
scaffold0007 (321-387)||(276207-276273)
[»] scaffold0076 (1 HSPs)
scaffold0076 (321-393)||(26483-26555)
[»] scaffold0006 (2 HSPs)
scaffold0006 (323-391)||(121056-121124)
scaffold0006 (330-391)||(84743-84804)
[»] scaffold0603 (1 HSPs)
scaffold0603 (321-391)||(6048-6118)
[»] scaffold0576 (1 HSPs)
scaffold0576 (321-391)||(9298-9368)
[»] scaffold0240 (1 HSPs)
scaffold0240 (331-391)||(15059-15119)
[»] scaffold0019 (1 HSPs)
scaffold0019 (333-393)||(173456-173516)
[»] scaffold0009 (2 HSPs)
scaffold0009 (333-387)||(219648-219702)
scaffold0009 (353-391)||(182562-182600)
[»] scaffold0108 (1 HSPs)
scaffold0108 (321-390)||(12653-12721)
[»] scaffold0014 (1 HSPs)
scaffold0014 (331-388)||(22221-22278)
[»] scaffold0161 (1 HSPs)
scaffold0161 (321-385)||(6795-6859)
[»] scaffold0062 (1 HSPs)
scaffold0062 (321-393)||(43917-43989)
[»] scaffold0184 (1 HSPs)
scaffold0184 (325-388)||(7460-7523)
[»] scaffold0502 (1 HSPs)
scaffold0502 (321-391)||(10892-10962)
[»] scaffold0024 (1 HSPs)
scaffold0024 (321-391)||(112328-112398)
[»] scaffold0128 (1 HSPs)
scaffold0128 (331-388)||(10735-10792)
[»] scaffold0023 (1 HSPs)
scaffold0023 (321-390)||(39773-39842)
[»] scaffold0655 (1 HSPs)
scaffold0655 (324-390)||(3232-3296)
[»] scaffold0035 (1 HSPs)
scaffold0035 (333-390)||(74787-74845)
[»] scaffold0002 (1 HSPs)
scaffold0002 (353-387)||(439995-440029)
[»] scaffold0284 (1 HSPs)
scaffold0284 (330-391)||(1588-1649)
[»] scaffold0211 (1 HSPs)
scaffold0211 (330-391)||(19207-19268)


Alignment Details
Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 31266350 - 31266420
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31266350 ttagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 31266420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 41637614 - 41637684
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41637614 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 41637684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 29749542 - 29749472
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  29749542 ttagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaa 29749472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 30783334 - 30783404
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30783334 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 30783404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 27523007 - 27523077
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27523007 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 27523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 28841481 - 28841411
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28841481 ttagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 28841411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 23388517 - 23388448
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  23388517 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 23388448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 32300447 - 32300516
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  32300447 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 32300516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 18916539 - 18916468
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||  |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  18916539 ttagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaa 18916468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 13788194 - 13788124
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||| |||||||||    |||||||||||||||| ||||||||||||||||||||||    
T  13788194 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaa 13788124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 14757248 - 14757190
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  14757248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaa 14757190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 18551392 - 18551326
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| | |||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  18551392 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcga 18551326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 32008948 - 32009018
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||  ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  32008948 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 32009018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 1141532 - 1141601
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  1141532 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgacca 1141601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 15636874 - 15636805
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  15636874 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgacca 15636805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 27327616 - 27327677
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcg 386  Q
    ||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  27327616 tgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcg 27327677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 28262360 - 28262429
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  28262360 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgacca 28262429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 32185828 - 32185897
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  32185828 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgacca 32185897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 28319713 - 28319649
Alignment:
Q  326 gaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 28319649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 37724131 - 37724059
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||  |||||||| ||||||||||  |||||||||| ||||| |||||||||||||||||||||||||    
T  37724131 ttagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaag 37724059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 334 - 393
Target Start/End: Complemental strand, 13613219 - 13613160
Alignment:
Q  334 tttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  13613219 tttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaag 13613160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 36550844 - 36550903
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaa 36550903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 37802517 - 37802446
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| |||||||| ||||||||||   |||||  |||||||||||||||||||||||||||||||||    
T  37802517 ttagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaaa 37802446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 8430292 - 8430354
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||||||||||||||    
T  8430292 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 8430354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 26687830 - 26687760
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||  |||||||| || |||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  26687830 ttagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaa 26687760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 41736168 - 41736234
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||||||||||||||||| |||||||||    |||||||||||||||| ||||||||||||||||||    
T  41736168 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcga 41736234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 20065213 - 20065144
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | |||| |||||  |||||||||||||||||| ||||||||||||||||||||    
T  20065213 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgacca 20065144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 21293850 - 21293781
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||| ||||||||||||||||||||||||| ||||||    
T  21293850 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgacca 21293781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 22140503 - 22140434
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||  ||||||  |||||||||||||||||||||||||||||||||||||||    
T  22140503 ttagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 22140434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 35697458 - 35697522
Alignment:
Q  327 aggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||||||| | | |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  35697458 aggaaaatttagc-atgaaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaa 35697522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 43408641 - 43408580
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  43408641 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 43408580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 388
Target Start/End: Original strand, 44722930 - 44722995
Alignment:
Q  323 agtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||| | |||||| ||| ||||| | |||||||||||||||||||||||||||||||||||||    
T  44722930 agtgagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgac 44722995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 37552233 - 37552295
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||| |||||||||    |||||||||||||||||||||| ||||||||||||||||||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaag 37552295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 40018798 - 40018868
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| |||||||||| ||||||||||| |||||| |||||||||||  ||||| |||||||| |||||    
T  40018798 ttagtgacgaaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaa 40018868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 29998698 - 29998633
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcg 386  Q
    ||||||||| || ||||| || |||||||  ||||||| |||||||||||||||||||||||||||    
T  29998698 ttagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 12779606 - 12779666
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||| ||||||||||| ||||||||||||||||||||||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaa 12779666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 23858086 - 23858026
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||  ||||||||||||||||||||||||||||||||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaa 23858026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 7093573 - 7093635
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||| |||| ||||||||||   ||||||||||||||||  ||||||||||||||||||||||    
T  7093573 aaaaattagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaa 7093635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 8763630 - 8763692
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    |||||||  ||||||||| || |||||||| ||||||| ||||||||||||||| ||||||||    
T  8763630 ttagtgaaaaaaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaatttt 8763692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 44366136 - 44366066
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| || ||||| |||| |||||| ||||||||||||||||||| ||| | ||||||| ||||||    
T  44366136 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaa 44366066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 44476482 - 44476444
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  44476482 aaatctctctctaattccgtcactaaattttgcgaccaa 44476444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 368
Target Start/End: Original strand, 22192188 - 22192235
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaatt 368  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||    
T  22192188 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaatt 22192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 9590466 - 9590532
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| ||||||||||||  |||||  |||||| ||||||||||  || ||||||||||||||    
T  9590466 ttagtgagggaaatttagcgagcaaaaacgtgaaatcgctctctaattttgttactaaattttgcga 9590532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 18609510 - 18609576
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||||| || |||||||| ||||||||||| ||||| ||||||||||| | | || |||||||||||    
T  18609510 ttagtgggggaaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcga 18609576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 26243428 - 26243390
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  26243428 aaattcctctctaattccgtcactaaattttacgaccaa 26243390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 24117368 - 24117315
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtca 374  Q
    |||||||||||||||||| || | |||||| ||||| | |||||||||||||||    
T  24117368 ttagtgaggaaaatttagagaagaaaaacatgaaattcatctctaattccgtca 24117315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 27058455 - 27058407
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattc 369  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||    
T  27058455 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 17104004 - 17103932
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17104004 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaag 17103932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 17824755 - 17824683
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17824755 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaag 17824683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 37992097 - 37992169
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  37992097 ttagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaag 37992169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 24576163 - 24576093
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  24576163 ttagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaa 24576093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 3823131 - 3823203
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  3823131 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaag 3823203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 8555443 - 8555371
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  8555443 ttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaag 8555371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 17810296 - 17810366
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  17810296 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaa 17810366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 29350921 - 29350990
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  29350921 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgacca 29350990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 27869248 - 27869308
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  27869248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaag 27869308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 6816522 - 6816452
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |||||    
T  6816522 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaa 6816452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 18010199 - 18010133
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| | |||||  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18010199 ttagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtcactaaattttgcga 18010133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 33652565 - 33652635
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  33652565 ttagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaa 33652635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 4330976 - 4331045
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  4330976 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgacca 4331045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 24193335 - 24193266
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||  |||||| | ||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  24193335 ttagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacca 24193266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 26399137 - 26399076
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  26399137 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 26399076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 5670298 - 5670238
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 5670238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 11938753 - 11938813
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 11938813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 19256220 - 19256280
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 19256280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 19493786 - 19493722
Alignment:
Q  330 aaaatttagcgagggaaaaca-agaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  19493786 aaaaattagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaag 19493722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 32247916 - 32247976
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  32247916 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 32247976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 333 - 388
Target Start/End: Original strand, 22939323 - 22939378
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  22939323 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgac 22939378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 27910903 - 27910840
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttg 384  Q
    ||||||||| | |||||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  27910903 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttg 27910840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 27957322 - 27957259
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttg 384  Q
    ||||||||| | |||||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  27957322 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttg 27957259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 13061061 - 13061003
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  13061061 aaaaattagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgac 13061003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 19240865 - 19240935
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||| | ||||||||||   |||| ||||||||||||||||||||||||||||||||||    
T  19240865 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaa 19240935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 19314049 - 19314119
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||| | ||||||||||   |||| ||||||||||||||||||||||||||||||||||    
T  19314049 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaa 19314119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 21350476 - 21350546
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||| |||||   |||||| ||||||||||||||||||||||||||||||||    
T  21350476 ttagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaa 21350546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 40289559 - 40289490
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  40289559 ttagtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaa 40289490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 43431698 - 43431628
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||| |||||||||||||||| |||||    
T  43431698 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaa 43431628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 19488191 - 19488130
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  19488191 aaaagttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaa 19488130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 29345072 - 29345133
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgc 385  Q
    |||||| |||||||| ||||||||||  |||||||||| |||||||||||||||||||||||    
T  29345072 gtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgc 29345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 387
Target Start/End: Original strand, 24636660 - 24636716
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 24636716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 31399638 - 31399578
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||| |||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  31399638 aaaaattagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgacca 31399578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 4647894 - 4647827
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||  |||||| | |||||||||   |||||||||||||||||||||||||||||||||||||    
T  4647894 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgac 4647827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 9915179 - 9915112
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||| | ||||||||||||||||||    
T  9915179 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcgac 9915112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 15251601 - 15251671
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||||||||||| ||||  ||||||||||  ||||||| |||||||||| ||||||||||||||||||||||    
T  15251601 ttagtgaggaaa-tttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaa 15251671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 18844683 - 18844612
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| |||||||| || |||||||| |||||||||||||||||  || | |||||||||||||||||    
T  18844683 ttagtgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaa 18844612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 25273457 - 25273394
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||   ||||||||||||||||| |||||||||||||||||||||||    
T  25273457 aaaaattagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaag 25273394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 5879202 - 5879272
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||| |||||   |||| |||||||||||||||||||||||||| |||||||    
T  5879202 ttagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaa 5879272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 6817052 - 6817122
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||||||||    ||||| |||||||||||||||||||||||||| ||||||    
T  6817052 ttagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaa 6817122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 30687966 - 30688004
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30687966 aaatccctctctaattccgtcactaaattttgcgaccaa 30688004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 32961657 - 32961727
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||||||||    |||| |||||||||||||||||||||| |||||||||||    
T  32961657 ttagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaa 32961727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 21219348 - 21219308
Alignment:
Q  352 gaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  21219348 gaaatccctctctaattccatcactaaattttgcgaccaaa 21219308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 30467083 - 30467023
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   ||||| |||||||||||| ||||||||||||||||||||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaa 30467023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 8789873 - 8789908
Alignment:
Q  356 tccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||||||||||||||||||||||||||||||    
T  8789873 tccctctctaattccgtcactaaattttgcgaccaa 8789908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 388
Target Start/End: Original strand, 8824855 - 8824890
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||||||||||||||||||||||||||||||    
T  8824855 aaatccctctctaattccgtcactaaattttgcgac 8824890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 10917834 - 10917889
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgc 385  Q
    |||| |||| |||| |||||| | ||||||||||||||||||||||||||||||||    
T  10917834 aaaaattagtgaggaaaaacatgcaatccctctctaattccgtcactaaattttgc 10917889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 33413095 - 33413044
Alignment:
Q  335 ttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcg 386  Q
    |||| ||||||||||   ||||||||||||||||||||||||||||||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcg 33413044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 23752393 - 23752355
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  23752393 aaatcactctctaattccgtcactaaattttgcgaccaa 23752355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 390
Target Start/End: Complemental strand, 25655978 - 25655928
Alignment:
Q  340 gagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  25655978 gagggaaaacgtgaaatccctctctaattctatcactaaattttgcgacca 25655928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 31344311 - 31344245
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| || ||||| |||||||||   ||||| ||||||||||||||||| ||||||||||||    
T  31344311 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcga 31344245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 16062078 - 16062009
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| ||||||   |||| |||||  |||||| ||||||||||||||||||| ||||||||||||    
T  16062078 ttagtgagggaaattttttgaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgacca 16062009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 25000560 - 25000503
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||||||| ||||||||||   | ||||||||||||||||||||| ||||| ||||||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgac 25000503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 40847574 - 40847502
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40847574 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaag 40847502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 36636506 - 36636576
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36636506 ttagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 36636576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 816330 - 816258
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  816330 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaag 816258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 1907355 - 1907427
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  1907355 ttagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaag 1907427  T

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Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 24605838 - 24605910
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  24605838 ttagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaag 24605910  T

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Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 47523789 - 47523717
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47523789 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaag 47523717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 28800878 - 28800948
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28800878 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 28800948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 39979763 - 39979693
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  39979763 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaa 39979693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 2457670 - 2457742
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  2457670 ttagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaag 2457742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 23232039 - 23232111
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| | |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23232039 ttagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaag 23232111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 15014544 - 15014477
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15014544 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgac 15014477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 10050975 - 10050905
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  10050975 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 10050905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 22486394 - 22486464
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| || |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  22486394 ttagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 22486464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 23577328 - 23577258
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  23577328 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaa 23577258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 27806018 - 27806088
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  27806018 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaa 27806088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 11036507 - 11036576
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  11036507 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 11036576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 20174020 - 20174089
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  20174020 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 20174089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 31425650 - 31425581
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  31425650 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgacca 31425581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 22501594 - 22501666
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||    
T  22501594 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaag 22501666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 42926559 - 42926492
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| | |||||| |||| |||||| |||||||||||||||||||||||||||||||||||||    
T  42926559 ttagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgac 42926492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 7733451 - 7733381
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  7733451 ttagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaa 7733381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 20924097 - 20924027
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  20924097 ttagtgatggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaa 20924027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 21917473 - 21917403
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  21917473 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 21917403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 31042251 - 31042321
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| || ||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  31042251 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaa 31042321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 38057636 - 38057702
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||| |||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||    
T  38057636 tgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaa 38057702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 20429465 - 20429534
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  20429465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgacca 20429534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 26577274 - 26577335
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  26577274 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaa 26577335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 37135424 - 37135355
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  37135424 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgacca 37135355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 15969796 - 15969856
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaag 15969856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 4514774 - 4514837
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  4514774 aaaaattagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaag 4514837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 1842898 - 1842964
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||| |||||||| ||||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaa 1842964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 18217829 - 18217899
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||| |||||   |||||||||||||||| ||||||||||||||||||||||    
T  18217829 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaa 18217899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 23750875 - 23750805
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||||||||    ||||||||||||||||||||||||||||||| |||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaa 23750805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 33427704 - 33427762
Alignment:
Q  335 ttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaag 33427762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 45664768 - 45664834
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||| ||| ||||||||||   |||||||||||||||||||||||||||||||||||    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 45664834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 1824330 - 1824269
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  1824330 aaaaattagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaa 1824269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 3904608 - 3904547
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  3904608 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 3904547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 11890286 - 11890214
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||| | || ||||||| |||| | ||||||||||||||| ||||||||    
T  11890286 ttagtgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaag 11890214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 24140450 - 24140522
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| |||||||||||  |||||| |||| |||||||||| |||||||| |||||||||    
T  24140450 ttagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaag 24140522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 11852021 - 11852080
Alignment:
Q  334 tttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||| ||||||||||  ||||||| ||||||||||||||||||||||||| ||||||||    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaag 11852080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 387
Target Start/End: Original strand, 32267350 - 32267413
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||||| |||||||| ||||||||||   ||||||||||||||||| |||||||||||||||||    
T  32267350 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcga 32267413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 390
Target Start/End: Complemental strand, 2650948 - 2650898
Alignment:
Q  340 gagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  2650948 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgacca 2650898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 9698677 - 9698615
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    ||||||||| |||||||| ||||||||||   |||| ||||||||||||||||||||||||||    
T  9698677 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaatttt 9698615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 48933136 - 48933205
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | |||  |||||  ||||| |||||||||||||||||||||||||||||||||    
T  48933136 ttagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcactaaattttgcgacca 48933205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 21623031 - 21623091
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||| ||||||||||||||| ||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaa 21623091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 6849350 - 6849283
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||| |||| |||||||| |||| |||||   ||||| ||||||||||||||||||||||||||||||    
T  6849350 ttagcgagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgac 6849283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 36993820 - 36993887
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||| | |||||||| |||| |||||| |||||| || |||||||||||||||||||||| ||||    
T  36993820 ttagtgaaggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgac 36993887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 3872317 - 3872256
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   ||||| |||||||||||||||||||||||||| ||||||    
T  3872317 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaa 3872256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 392
Target Start/End: Complemental strand, 14786764 - 14786703
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||| |||||||||||   |||| ||| | |||||||||||||||||||||||||||||    
T  14786764 aaatttaacgagggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaa 14786703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 21871572 - 21871638
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||| |||||||||    |||||    ||||||||||||||||||||||||||||||    
T  21871572 ttagtgaggaaaatttagtgagggaaaatgtaaaatc----tctaattccgtcactaaattttgcgaccaa 21871638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 23699964 - 23699895
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||  |||||| | |||||||||   ||||||||||| |||||| ||||||||||||||||||||    
T  23699964 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgacca 23699895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 388
Target Start/End: Original strand, 23539263 - 23539299
Alignment:
Q  352 gaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||||||||||||||||| |||||||||||||    
T  23539263 gaaatccctctctaattccgtcattaaattttgcgac 23539299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 391
Target Start/End: Original strand, 27304904 - 27304940
Alignment:
Q  355 atccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||||||||||||||||| ||||    
T  27304904 atccctctctaattccgtcactaaattttgcggccaa 27304940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 10222768 - 10222697
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||||||| ||||||||| ||  ||||||   ||||||||||||||||| |||| |||||||||||| ||||    
T  10222768 ttagtgagaaaaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaaa 10222697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 392
Target Start/End: Complemental strand, 25777247 - 25777180
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||| |||||||| ||||||||||  |||||| |||||||||| | |||||||||||| ||| ||||    
T  25777247 tgagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaa 25777180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 2093492 - 2093430
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||| |||| ||||||||||   ||||| ||||||||||||||||||||||||| ||| ||||    
T  2093492 aaaaattagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaa 2093430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 380
Target Start/End: Complemental strand, 5235448 - 5235420
Alignment:
Q  352 gaaatccctctctaattccgtcactaaat 380  Q
    |||||||||||||||||||||||||||||    
T  5235448 gaaatccctctctaattccgtcactaaat 5235420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 15330306 - 15330274
Alignment:
Q  359 ctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||||| |||||||||||||||||||||    
T  15330306 ctctctaattctgtcactaaattttgcgaccaa 15330274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 27428151 - 27428079
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27428151 ttagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaag 27428079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 33818700 - 33818630
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33818700 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 33818630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 618294 - 618364
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  618294 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 618364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 25397918 - 25397855
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25397918 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaag 25397855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 10420391 - 10420321
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  10420391 ttagtgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaa 10420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 16121978 - 16121908
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  16121978 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaa 16121908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 17039770 - 17039700
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||| ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  17039770 ttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 17039700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 17079405 - 17079475
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| ||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17079405 ttagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaa 17079475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 23423895 - 23423825
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  23423895 ttagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaa 23423825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 33816897 - 33816827
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  33816897 ttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaa 33816827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 23975635 - 23975704
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  23975635 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 23975704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 25673367 - 25673295
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||  ||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  25673367 ttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaag 25673295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 2472841 - 2472783
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  2472841 atttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaa 2472783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 5982649 - 5982715
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||| ||||||||||   ||||||||||||||||||||||||||| |||||||||||    
T  5982649 tgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaa 5982715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 7888797 - 7888867
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||| ||||||||||   |||||||||||||| |||||||||||||||| |||||||    
T  7888797 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaa 7888867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 8886990 - 8886920
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||||||||    |||||||||||||||||||||||||||||||||||||||    
T  8886990 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaa 8886920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 12328365 - 12328299
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| | |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  12328365 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcga 12328299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 13620266 - 13620196
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  13620266 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaa 13620196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 23408980 - 23409046
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||    
T  23408980 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcga 23409046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 35620470 - 35620412
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  35620470 atttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaa 35620412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 746998 - 746937
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  746998 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 746937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 8108999 - 8108930
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||  |||||| | ||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  8108999 ttagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgacca 8108930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 15060973 - 15061042
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | |||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  15060973 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 15061042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 36196394 - 36196463
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  36196394 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgacca 36196463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 11927925 - 11927858
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| || ||||| || |||||||  |||||||||||||||||||||||||||||||||||||    
T  11927925 ttagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgac 11927858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 17986729 - 17986796
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| | |||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||    
T  17986729 ttagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgac 17986796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 20959508 - 20959575
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| |||||||| ||||||||||  |||||| ||||||||||||||||||||||||| ||||    
T  20959508 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgac 20959575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 12045727 - 12045797
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||| |||||||||||||||||||||||| |||||||    
T  12045727 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaa 12045797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 10494746 - 10494807
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  10494746 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 10494807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 40484053 - 40484114
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  40484053 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 40484114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 24138970 - 24138910
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   ||||| |||||||||||||||||||||||||||||||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaa 24138910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 26708714 - 26708654
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||| ||||||||||||||||||||||||||||||||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaa 26708654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 26978448 - 26978388
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||| ||||||||||||||||||||||||||||||||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaa 26978388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 391
Target Start/End: Complemental strand, 17036540 - 17036481
Alignment:
Q  332 aatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| ||||||||||   ||||||||||||||||| |||||||||||||||||||||    
T  17036540 aatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaa 17036481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 390
Target Start/End: Complemental strand, 31853208 - 31853158
Alignment:
Q  340 gagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  31853208 gaggaaaaacatgaaatctctctctaattccgtcactaaattttgcgacca 31853158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 32726865 - 32726795
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| | |||||||| |||||||||   |||||  |||||||||||||||||||||||||||||||||    
T  32726865 ttagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaa 32726795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 36832029 - 36831959
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||||||||    |||||||||||||||||| ||||||||||||| ||||||    
T  36832029 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaa 36831959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 13974217 - 13974156
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattt 382  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||| |||||||||||||||||    
T  13974217 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaattt 13974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 17772098 - 17772041
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||| |||| |||||||||||  ||||| |||||||||||||||||||||||||||||    
T  17772098 aaaaattagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcga 17772041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 28265582 - 28265545
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28265582 aaatccctctctaattccgtcactaaattttgcgacca 28265545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 29727985 - 29727928
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaa 378  Q
    ||||||||| |||||| ||||||||||||  ||||| |||||||||||||||||||||    
T  29727985 ttagtgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtcactaa 29727928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 36716339 - 36716270
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||||||||||||||| | ||||||||||  ||||||| ||||||||||| ||| |||||||| ||||||    
T  36716339 ttagtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgacca 36716270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 38837801 - 38837740
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  38837801 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaa 38837740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 3080835 - 3080763
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||| |||||||||| ||||||||||| |||||||||||| |||| | ||||||| ||||| ||| ||||    
T  3080835 ttagtgaagaaaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaag 3080763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 4125318 - 4125258
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||| |||| |||||||||   |||||| ||||||||||||||||||||||||||||||||    
T  4125318 aaaaattagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgacca 4125258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 25652719 - 25652655
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||||| |||||||| |||||||||    ||||||||||||||||||||||| ||||||||||||    
T  25652719 gtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgac 25652655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 7003867 - 7003803
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||| | ||||||||||  ||||||  ||||||||||||||||||||||||||||    
T  7003867 ttagtgagggaaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattttgcga 7003803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 16631981 - 16631943
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  16631981 aaatccctctctaattccgtcactaaattttgtgaccaa 16631943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 33735088 - 33735042
Alignment:
Q  345 aaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||    
T  33735088 aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaa 33735042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 36597470 - 36597409
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| |||||||||||  |||| |||||||||||| ||||||||||||| |||||||    
T  36597470 aaaaattagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaa 36597409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 22649458 - 22649406
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    |||||||| ||||||||||  ||||||| ||||||||||||||| ||||||||    
T  22649458 aaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 35778150 - 35778211
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||| ||||||||| ||| |||| || | ||||||||||||||||    
T  35778150 aaaaattagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaa 35778211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 16464687 - 16464735
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaa 378  Q
    |||| |||| ||||||||||| ||||| |||||||| ||||||||||||    
T  16464687 aaaaattagtgagggaaaacatgaaattcctctctatttccgtcactaa 16464735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 25147719 - 25147791
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25147719 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaag 25147791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 1638445 - 1638517
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  1638445 ttagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaag 1638517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 33914057 - 33914128
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  33914057 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaa 33914128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 5399607 - 5399677
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  5399607 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaa 5399677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 22156740 - 22156670
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22156740 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 22156670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 37378762 - 37378693
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37378762 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgacca 37378693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 37761977 - 37761912
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  37761977 tgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 2275817 - 2275751
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2275817 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcga 2275751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 5473847 - 5473917
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||| ||||||||||   |||||||||| ||||||||||||||||||||||||||||    
T  5473847 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaa 5473917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 8878881 - 8878951
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  8878881 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaa 8878951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 19839177 - 19839247
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| ||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  19839177 ttagcgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 19839247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 22128451 - 22128381
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  22128451 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaa 22128381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 32175876 - 32175806
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 32175806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 55309352 - 55309282
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  55309352 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 55309282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 27040164 - 27040095
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  27040164 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 27040095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 46286368 - 46286299
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  46286368 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 46286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 18051837 - 18051905
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacc 389  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18051837 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacc 18051905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 30269127 - 30269056
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| ||||||||||||||||||    ||||| ||||||||||||||||||||||||||||||||||    
T  30269127 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaa 30269056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 30283062 - 30283133
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| ||||||||||||||||||    ||||| ||||||||||||||||||||||||||||||||||    
T  30283062 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaa 30283133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 36689675 - 36689746
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||| |||| |||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  36689675 ttagcgagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaa 36689746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 22168266 - 22168336
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  22168266 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaa 22168336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 13028945 - 13028885
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 13028885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 9059072 - 9059021
Alignment:
Q  340 gagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  9059072 gagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaa 9059021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 9913259 - 9913326
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| || ||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  9913259 gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaa 9913326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 38223511 - 38223578
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| |||||||| ||||||||||   ||||||||||||||||| |||||||||||||||||||||    
T  38223511 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaa 38223578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 12071960 - 12072026
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| | |||||| || ||||||||  |||||||||||||||||||||||||||||||||||    
T  12071960 ttagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcga 12072026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 18744209 - 18744147
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||||||||||||||    
T  18744209 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 18744147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 29625332 - 29625390
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  29625332 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgac 29625390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 45532718 - 45532652
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||| ||||||||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcga 45532652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 14944753 - 14944814
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  14944753 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 14944814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 19680559 - 19680494
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||| |||||| | ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  19680559 tgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgacca 19680494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 12105990 - 12106052
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  12105990 aaaaattagtgagggaaaacatgaaacccctctctaattccgtcactaaa-tttgcgaccaaag 12106052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 38619854 - 38619917
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||| |||||||||    
T  38619854 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaag 38619917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 38645757 - 38645820
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||   |||||||||||||| ||||||||||||||||||||||||||    
T  38645757 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaag 38645820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 13565054 - 13564992
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    ||||||||| |||||||| ||||||||||   |||| ||||||||||||||||||||||||||    
T  13565054 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaatttt 13564992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 16915367 - 16915437
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| | |||||||| ||||||||| | |||||| ||||||||||  |||||||||||||||||||||    
T  16915367 ttagtgacggaaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaa 16915437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 30508017 - 30508055
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30508017 aaatccctctctaattccgtcactaaattttgcgaccaa 30508055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 9239411 - 9239350
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||  ||||||||||||||||||||||| | ||||||||||||||    
T  9239411 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaa 9239350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 9670609 - 9670548
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||| ||||||||||||||||||||||||||||||||||    
T  9670609 aaaaattagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaa 9670548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 25026565 - 25026622
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||||||| ||||||||||   ||||| ||||||||||||||||||||||||||||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgac 25026622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 4586887 - 4586835
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttt 4586835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 387
Target Start/End: Original strand, 45091282 - 45091338
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||||||| ||||||||||   |||||| ||||||||||||||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga 45091338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 44783492 - 44783551
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctct-ctaattccgtcactaaattttgcgaccaa 391  Q
    ||||| ||| |||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  44783492 atttatcgaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaa 44783551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 18714932 - 18714970
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  18714932 aaatccctctctaattccgtcactaaattttgagaccaa 18714970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 393
Target Start/End: Original strand, 313604 - 313657
Alignment:
Q  340 gagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||| |||| |||||||||||||||||  || ||||||||||||||||||||    
T  313604 gagggataacatgaaatccctctctaattatgttactaaattttgcgaccaaag 313657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 4606959 - 4606898
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| |||||||||   |||||| |||||||||||||||||||||||||||| ||||    
T  4606959 aaaaattagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaa 4606898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 6553811 - 6553872
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| |||||| |||| |||||||||||||||||  || ||||||||||||||||||    
T  6553811 aaaaattagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaa 6553872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 24682446 - 24682397
Alignment:
Q  341 agggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  24682446 agggaaaacgtgaaatccctctctaattccaccactaaattttgcgacca 24682397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 9238726 - 9238694
Alignment:
Q  359 ctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||||||||||||||||||    
T  9238726 ctctctaattccgtcactaaattttgcgaccaa 9238694  T

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Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 380
Target Start/End: Complemental strand, 30420172 - 30420113
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaat 380  Q
    |||||||| ||||||||| | | ||||||| ||||| ||||||||||| |||||||||||    
T  30420172 ttagtgagaaaaatttagagtgagaaaacatgaaattcctctctaatttcgtcactaaat 30420113  T

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Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 3612993 - 3613063
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||  || ||||| |||| |||||  ||||| ||||||||||| |||||||||| |||||||||||    
T  3612993 ttagtgagagaattttagagaggaaaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaa 3613063  T

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Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 7112053 - 7112015
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  7112053 aaatccctctataattccgtcactaaatttttcgaccaa 7112015  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 30568138 - 30568069
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||| | |||||| | ||||||||||   ||||| |||||||||||||||| |||||||| ||||||    
T  30568138 ttagtgaaggaaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgacca 30568069  T

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Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 54539294 - 54539351
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||||||| ||||||||||   ||||| |||| ||||| |||||||||||||||||||    
T  54539294 aaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgac 54539351  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 39234940 - 39235009
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| |||||||| || |||||||  ||||||  |||||||||  || |||||||||||||||||||    
T  39234940 ttagtgagggaaatttagagaaggaaaacgtgaaatc--tctctaattttgttactaaattttgcgaccaaa 39235009  T

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Target: chr1 (Bit Score: 61; Significance: 5e-26; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 18895039 - 18894967
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  18895039 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaag 18894967  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 50845469 - 50845399
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50845469 ttagtgtggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 50845399  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 14760867 - 14760939
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  14760867 ttagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaag 14760939  T

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Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 6459217 - 6459287
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6459217 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 6459287  T

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Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 9110114 - 9110044
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9110114 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 9110044  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 12720809 - 12720879
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12720809 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 12720879  T

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Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 41752433 - 41752503
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41752433 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 41752503  T

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Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 45839292 - 45839362
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45839292 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 45839362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 13523100 - 13523028
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| || ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  13523100 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaag 13523028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 41071974 - 41071902
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  41071974 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaag 41071902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 6412192 - 6412122
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  6412192 ttagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaa 6412122  T

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Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 7830031 - 7830101
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  7830031 ttagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaa 7830101  T

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Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 9464103 - 9464172
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  9464103 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 9464172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 12161814 - 12161883
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  12161814 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 12161883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 19865253 - 19865314
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19865253 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 19865314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 22158802 - 22158871
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  22158802 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 22158871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 23457897 - 23457966
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  23457897 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 23457966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 52183678 - 52183747
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  52183678 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 52183747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 12370080 - 12370008
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| ||||||||  ||||||||||  |||||| ||||||||||||||||||||||||||||||||||    
T  12370080 ttagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaag 12370008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 14486771 - 14486699
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||||||||||||| |||||||||| |||||    
T  14486771 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaag 14486699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 41063197 - 41063269
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| |||| ||||||  ||||| ||||||||||||||||||||||||||||| |||||    
T  41063197 ttagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaag 41063269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 13102316 - 13102386
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||||||||||  ||||| || ||||||||||||||||||||||||||||||    
T  13102316 ttagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaa 13102386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 15243085 - 15243151
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  15243085 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcga 15243151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 9259322 - 9259253
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  9259322 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgacca 9259253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 12174903 - 12174838
Alignment:
Q  323 agtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||| | |||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  12174903 agtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgac 12174838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 20408299 - 20408230
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  20408299 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgacca 20408230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 4340417 - 4340477
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 4340477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 22603548 - 22603620
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  22603548 ttagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaag 22603620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 41120866 - 41120806
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 41120806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 41358996 - 41359060
Alignment:
Q  330 aaaatttagcgagggaaaaca-agaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  41358996 aaaaattagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaag 41359060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 16913716 - 16913649
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||| | |||||||| ||||    
T  16913716 ttagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgac 16913649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 29549418 - 29549485
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||| |||||    
T  29549418 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgac 29549485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 38531309 - 38531242
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| |||||||| ||||||||||  |||||| |||||||||||| |||||||||||||||||    
T  38531309 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgac 38531242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 16258625 - 16258555
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||| |||| |||||  |||| |||||| |||||||||||||||||||||| |||||    
T  16258625 ttagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaa 16258555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 19081728 - 19081798
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| || ||||| ||||||||||  |||||||||||||||||| ||||||||||||| |||||||    
T  19081728 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaa 19081798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 19129616 - 19129686
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| || ||||| ||||||||||  |||||||||||||||||| ||||||||||||| |||||||    
T  19129616 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaa 19129686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 7181694 - 7181625
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| |  |||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  7181694 ttagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgacca 7181625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 17661050 - 17661119
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  ||||| ||||||||||||| |||||||||||||||||||    
T  17661050 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgacca 17661119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 18890688 - 18890619
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||| ||||||  ||||||||||||||||||||| |||||||||||||||||    
T  18890688 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgacca 18890619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 22789730 - 22789661
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||||| ||||||||||  |||||| || |||||||| ||||||||||||||||||||    
T  22789730 ttagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgacca 22789661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 50092427 - 50092374
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttg 384  Q
    |||||| | ||||||||||| |||||||||||||||||||||||||||||||||    
T  50092427 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 50092374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 46786087 - 46786027
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||| ||||||||||||||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaa 46786027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 11917786 - 11917857
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||  || ||||| ||||||||||  ||| ||||| |||||||||||||||||||||||||||||||    
T  11917786 ttagtgagataagtttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaa 11917857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 388
Target Start/End: Complemental strand, 46339564 - 46339517
Alignment:
Q  341 agggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  46339564 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgac 46339517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 48522518 - 48522589
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| | || ||| ||||||||||| ||||| |||||  ||||||||||||||||||||||||||||    
T  48522518 ttagtgagggatatgtagtgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaa 48522589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 352 - 390
Target Start/End: Complemental strand, 25788105 - 25788067
Alignment:
Q  352 gaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgacca 25788067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 30928517 - 30928447
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||  ||| ||||||| |||||  |||||||||||  ||||||||||||||||||||    
T  30928517 ttagtgaggaaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattttgcgaccaa 30928447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 32046876 - 32046946
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||| ||| ||||||||||   ||||| ||||||||||||| |||||||||||||||||||    
T  32046876 ttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaa 32046946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 13308950 - 13308889
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| |||| |||||| ||||||||||||||||| | ||||||||||||||||||||    
T  13308950 aaaaattagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaa 13308889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 28229585 - 28229524
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  28229585 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaa 28229524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 9985466 - 9985394
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||| | |||| |||||   |||||||||||||||||||||| |||||||| |||||||||    
T  9985466 ttagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaag 9985394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 17734093 - 17734022
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaa-ttttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| |||||| ||| |||||||| ||| |||| ||||||||||||    
T  17734093 ttagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaa 17734022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 26825253 - 26825312
Alignment:
Q  334 tttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||| ||||||||||  ||||| |||||||||||||||||||||||||| ||| |||||    
T  26825253 tttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaag 26825312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 46790009 - 46790072
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||   |||||||| ||||||||||||| ||||||||||||||||||    
T  46790009 aaaaattagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaag 46790072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 12989852 - 12989922
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||| | ||||||||||  |||||| ||| ||||||| ||||||||| |||||||||||    
T  12989852 ttagtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaa 12989922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 13195586 - 13195648
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcg 386  Q
    |||||| |||||||| |||||||||    ||||||||||||||||| ||||||||||||||||    
T  13195586 gtgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcg 13195648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 17200149 - 17200079
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||| |||| |  |||| | ||| ||||||||||||||||||||||||||||    
T  17200149 ttagtgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaa 17200079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 383
Target Start/End: Original strand, 30673502 - 30673556
Alignment:
Q  329 gaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    |||||||||| ||||||||||| ||||||||||||||||||  | ||||||||||    
T  30673502 gaaaatttagtgagggaaaacatgaaatccctctctaattctattactaaatttt 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 39748942 - 39749004
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| || |||||||| |||||||| ||| |||| |||||||||||||||||| ||||    
T  39748942 aaaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaa 39749004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 46865243 - 46865313
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| ||||| || |||||| |||  ||||||||||||||||||| | ||||||||||||| ||||    
T  46865243 ttagtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaa 46865313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 52621154 - 52621216
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    |||||||||||||||||| |||| |||||| ||||| | || |||||||| ||||||||||||    
T  52621154 ttagtgaggaaaatttagtgaggaaaaacatgaaattcttcactaattccatcactaaatttt 52621216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 9882167 - 9882110
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||| |||| |||| ||||||  |||| ||||||||||||||||||||||||||||||    
T  9882167 aaaaattagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcga 9882110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 51973428 - 51973493
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||| |||||| | |||||||||   |||||  ||||||||||||||||||||||||||||||||    
T  51973428 tgagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgacca 51973493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 9177110 - 9177170
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| |||| |||||   |||||||||| ||||| ||||||||||||||||||||||    
T  9177110 aaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaa 9177170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 12806945 - 12806906
Alignment:
Q  352 gaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  12806945 gaaatccctctataattccgtcactaaattttacgaccaa 12806906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 20580909 - 20580976
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||  || ||||| ||||||||||  ||||||||||||||||| ||| | |||||||||||||    
T  20580909 ttagtgagagaattttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgac 20580976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 25687409 - 25687355
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgc 385  Q
    |||||||| || ||||||||  | |||||||||||||||| ||||||||||||||    
T  25687409 aaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgc 25687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 390
Target Start/End: Complemental strand, 27253955 - 27253925
Alignment:
Q  360 tctctaattccgtcactaaattttgcgacca 390  Q
    |||||||||||||||||||||||||||||||    
T  27253955 tctctaattccgtcactaaattttgcgacca 27253925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 49881053 - 49881114
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| |||||| |||| |||||||||||||||| | || ||||||||||| ||||||    
T  49881053 aaaaattagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaa 49881114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 18788049 - 18787980
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| |||||||  ||||||||||  || |||  |||||||||  ||||||||||||||||||||||    
T  18788049 ttagtgagggaaatttaaagagggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaa 18787980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 74680 - 74610
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  74680 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 74610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 58582 - 58652
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  58582 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 58652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 391
Target Start/End: Original strand, 19610335 - 19610404
Alignment:
Q  322 tagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19610335 tagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 19610404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 30219334 - 30219405
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  30219334 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaa 30219405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 49915447 - 49915514
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49915447 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgac 49915514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 16299857 - 16299927
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16299857 ttagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 16299927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 29215988 - 29216058
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  29215988 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaa 29216058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 18104669 - 18104600
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18104669 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgacca 18104600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 25882566 - 25882638
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  25882566 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaag 25882638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 27449084 - 27449156
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  27449084 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaag 27449156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 36543745 - 36543817
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||| | ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  36543745 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaag 36543817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 18091686 - 18091615
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| | |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  18091686 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaa 18091615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 11007822 - 11007752
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  11007822 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 11007752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 11915754 - 11915824
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  11915754 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 11915824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 23217344 - 23217278
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  23217344 gtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggacca 23217278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 28389969 - 28390039
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  28389969 ttagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaa 28390039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 17582440 - 17582371
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17582440 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 17582371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 18539800 - 18539869
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  18539800 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 18539869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 26098818 - 26098879
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26098818 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 26098879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 26830581 - 26830512
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  26830581 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgacca 26830512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 4393489 - 4393421
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacc 389  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  4393489 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacc 4393421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 7623670 - 7623598
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||| | |||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  7623670 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaag 7623598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 9652574 - 9652641
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  9652574 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgac 9652641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 11219134 - 11219201
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||||||||||||||| | ||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  11219134 ttagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgac 11219201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 31250087 - 31250154
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| |||||||| |||||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  31250087 gtgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaa 31250154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 5260933 - 5261003
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||| ||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  5260933 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 5261003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 8428167 - 8428237
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| |||||| ||||||||||||||||||||||||| |||||||    
T  8428167 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaa 8428237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 17762638 - 17762708
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  17762638 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaa 17762708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 19063958 - 19064028
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  19063958 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaa 19064028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 19270003 - 19269933
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||| ||||||||||||||||||||||||||||    
T  19270003 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaa 19269933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 19545506 - 19545576
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||| |||||   |||||||||||||||||||||||||||||||||||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 19545576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 27968911 - 27968981
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  27968911 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaa 27968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 1311097 - 1311028
Alignment:
Q  322 tagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| |||||||| || |||||||   |||||||||||||||||||||||||||||||||||||||    
T  1311097 tagtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 1311028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 278
Target Start/End: Original strand, 4704074 - 4704215
Alignment:
Q  137 aattggagggaaagtgaacaaaatcttttgaaactcacagatactaaccatattcacctacttatgctctaaacaaacaagttttttatataagtggaag 236  Q
    |||| ||||||||| ||||| |||||||| |||||||||||||| | |  | |||||||||| |||| ||||| |||||||||| | | ||||||| ||     
T  4704074 aatttgagggaaagggaacacaatcttttcaaactcacagataccatctctcttcacctactcatgcactaaataaacaagtttataacataagtgtaaa 4704173  T
Q  237 agtatatattgaataatgaagcttttgaattaataagtgatg 278  Q
    ||||||| |||||  ||||||| ||| |||||| || |||||    
T  4704174 agtatatgttgaaccatgaagccttttaattaagaattgatg 4704215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 8543465 - 8543534
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  8543465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgacca 8543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 13921330 - 13921391
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  13921330 aaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 13921391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 15064122 - 15064061
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  15064122 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaa 15064061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 11085481 - 11085409
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||  |||||||| ||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  11085481 ttagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaag 11085409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 27212920 - 27212848
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| |||| |||||  ||||||||||| ||||||||||||||||||||||||| ||||    
T  27212920 ttagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaag 27212848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 29236050 - 29236110
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 29236110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 36564578 - 36564506
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||| | |||||||| || ||||||||||||||||| |||||||||||| |||||||||||    
T  36564578 ttagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaag 36564506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 48404866 - 48404926
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 48404926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 1628211 - 1628278
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||| ||||    
T  1628211 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgac 1628278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 10941785 - 10941734
Alignment:
Q  340 gagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  10941785 gagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaa 10941734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 46942486 - 46942553
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| || ||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  46942486 gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaa 46942553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 50665766 - 50665703
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  50665766 aaaaattagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaag 50665703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 5744421 - 5744479
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  5744421 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgac 5744479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 5781380 - 5781438
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  5781380 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgac 5781438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 11837339 - 11837281
Alignment:
Q  335 ttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  11837339 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaag 11837281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 19223445 - 19223515
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| | ||||||||   ||||||||||||||||||||||||||||||| |||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaa 19223515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 26390773 - 26390703
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||| | |||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  26390773 ttagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaa 26390703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 27711298 - 27711236
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||| ||||||| |||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  27711298 aaaaattagcgacggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaa 27711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 13905168 - 13905107
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  13905168 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 13905107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 21088757 - 21088818
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  21088757 aaaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaa 21088818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 23255534 - 23255485
Alignment:
Q  244 attgaataatgaagcttttgaattaataagtgatgtgatcaacatcataa 293  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  23255534 attgattaatgaagcttttgaattaagaagtgatgtgatcaacatcataa 23255485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 23773482 - 23773543
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  23773482 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 23773543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 21816727 - 21816787
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||| ||||||||||||||||||||||||||||||||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaa 21816787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 27182785 - 27182725
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||||| ||| ||||||    
T  27182785 aaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaa 27182725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 17269734 - 17269671
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| |||| |||| | |||||||||||||||||||||||||||||||||||| |||||    
T  17269734 aaaaattagtgaggaaaaatatgaaatccctctctaattccgtcactaaattttgcgatcaaag 17269671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 390
Target Start/End: Original strand, 6718725 - 6718775
Alignment:
Q  340 gagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  6718725 gagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgacca 6718775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 8110335 - 8110405
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||| ||||||||||||||||| |||||||| |||||||    
T  8110335 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaa 8110405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 10772184 - 10772126
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| ||||||||| | ||||||||||||||||| ||||| |||||||||||||    
T  10772184 aaaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgac 10772126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 20088406 - 20088468
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||| |||| |||||| ||||||| ||||||||||| ||||||||||||| ||||||||    
T  20088406 aaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaag 20088468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 21020061 - 21020131
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||  | ||||| |||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  21020061 ttagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaa 21020131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 29704171 - 29704105
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||| | ||| ||||||  ||||||||||| ||||||||||||||||||||||||    
T  29704171 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcga 29704105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 31433733 - 31433803
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| || |||||  |||||||||  ||||| |||||||||||||||||||||||||| |||||||    
T  31433733 ttagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaa 31433803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 1745617 - 1745556
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   ||||| |||||||||||||||||||||||||||||||||    
T  1745617 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaa 1745556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 5565727 - 5565788
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||  |||||||||||||||||  |||||||||||||||||||||    
T  5565727 aaaaattagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaa 5565788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 28859596 - 28859657
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||| |||||   ||||||||||||||||||||||||||||||||| |||||    
T  28859596 aaaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaa 28859657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 29956372 - 29956437
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||| |||||| | |||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  29956372 tgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgacca 29956437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 30005527 - 30005592
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||| |||||| | |||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  30005527 tgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgacca 30005592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 46012858 - 46012801
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||| |||| ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  46012858 aaaaattagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcga 46012801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 23233293 - 23233229
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaagt 394  Q
    |||| |||| ||||||||||  ||||| |||||| |||||| |||||||||||||||||||||||    
T  23233293 aaaaattagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagt 23233229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 387
Target Start/End: Original strand, 8546272 - 8546307
Alignment:
Q  352 gaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  8546272 gaaatccctctctaattccgtcactaaattttgcga 8546307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 15490031 - 15490101
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| |||||||| ||| ||||||  ||||||||||| |||||  ||||||||||||||||||||||    
T  15490031 ttagtgagggaaatttagtgagagaaaacgtgaaatccctctttaatt-tgtcactaaattttgcgaccaaa 15490101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 20615482 - 20615411
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| |||||||| || |||||||  ||||| |||||||||||| |||| |||||||| ||||||||    
T  20615482 ttagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaa 20615411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 4703060 - 4703098
Alignment:
Q  21 tgaacatttcagcacagtatagctaacttgtctcctact 59  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  4703060 tgaacatttcagcacagtatagctaacttctctcctact 4703098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 10803716 - 10803786
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| |||||||| ||||||||||   |||| ||||| ||||||||||| ||||||||||||||||    
T  10803716 ttagcgagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaa 10803786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 21490141 - 21490103
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  21490141 aaatccctctctaattctgtcactaaattttgcgaccaa 21490103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 3461440 - 3461383
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||| |||| ||||||||||   |||||||||||||||||||||| ||||||||||||    
T  3461440 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcga 3461383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 35579654 - 35579605
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaat 380  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 37283550 - 37283581
Alignment:
Q  352 gaaatccctctctaattccgtcactaaatttt 383  Q
    ||||||||||||||||||||||||||||||||    
T  37283550 gaaatccctctctaattccgtcactaaatttt 37283581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 18380020 - 18380082
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    ||||||||| |||||||  |||||||||    |||||||||| ||||||||||||||||||||    
T  18380020 ttagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaatttt 18380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 29451100 - 29451154
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgc 385  Q
    |||||||| ||||||||||   ||||||||||||||||||||| | |||||||||    
T  29451100 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgc 29451154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 43329870 - 43329832
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  43329870 aaatccttctctaattccgtcactaaattttacgaccaa 43329832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 26963384 - 26963315
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaagt 394  Q
    ||||| |||||||| |||||||||    |||| ||||||||||||||| |||||||||| | ||||||||    
T  26963384 tgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagt 26963315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 12845003 - 12845075
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  12845003 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaag 12845075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 14886561 - 14886633
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  14886561 ttagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaag 14886633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 2992615 - 2992685
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2992615 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 2992685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 9892963 - 9893033
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  9892963 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 9893033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 12951708 - 12951778
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  12951708 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaa 12951778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 18033664 - 18033594
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18033664 ttagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 18033594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 22083838 - 22083908
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  22083838 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaa 22083908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 28364911 - 28364983
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  28364911 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaag 28364983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 6598464 - 6598534
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  6598464 ttagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaa 6598534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 11530225 - 11530287
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  11530225 ttagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaatttt 11530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 21990313 - 21990243
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||| ||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  21990313 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaa 21990243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 25398002 - 25398072
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  25398002 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 25398072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 26939599 - 26939657
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26939599 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 26939657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 21140939 - 21141008
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  21140939 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 21141008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 22579488 - 22579419
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  22579488 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 22579419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 27705422 - 27705491
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  27705422 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 27705491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 27796973 - 27796909
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgc 385  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  27796973 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgc 27796909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 495766 - 495696
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   ||||| |||||||||||||||||||||||||||||||||    
T  495766 ttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaa 495696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 11049878 - 11049820
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  11049878 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaa 11049820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 15364597 - 15364527
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||| ||||||||||||||||||||||||||||||||    
T  15364597 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaa 15364527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 20182145 - 20182211
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  20182145 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcga 20182211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 22153846 - 22153780
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||| | ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  22153846 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcga 22153780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 24661148 - 24661078
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  24661148 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaa 24661078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 26224440 - 26224498
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  26224440 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaa 26224498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 11077658 - 11077719
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  11077658 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaa 11077719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 23281786 - 23281855
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||| |||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  23281786 ttagggagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 23281855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 12680323 - 12680251
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||||  ||||| ||||||||||||||||| |||||||| ||| |||||    
T  12680323 ttagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaag 12680251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 21691635 - 21691563
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| || ||||| |||| |||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  21691635 ttagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaag 21691563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 1939381 - 1939310
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| | ||| || ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  1939381 ttagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaa 1939310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 9885243 - 9885313
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| |||||||||| ||||||||||| ||||||||||| |||||  ||||||||||||||| |||||    
T  9885243 ttagtgacgaaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaa 9885313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 12160985 - 12160923
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    ||||||||||| |||||| |||||||||||  |||||||||||||||| ||||||||||||||    
T  12160985 ttagtgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt 12160923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 12200694 - 12200764
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||| | ||||||||||||||||||| |||||||||||| |||||||    
T  12200694 ttagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaa 12200764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 384
Target Start/End: Original strand, 14872128 - 14872182
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttg 384  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  14872128 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 14872182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 18048788 - 18048858
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| |||| |||||| |||||||||| |||||||  ||||||||||||||||||||    
T  18048788 ttagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaa 18048858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 33250835 - 33250777
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  33250835 atttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaa 33250777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 343702 - 343631
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| |||||||  ||||||||||   ||||||||||||||||| ||||||||| ||||||||||||    
T  343702 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaa 343631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 5192319 - 5192256
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||   ||||||||||||||||||||||||||||||| |||||||||    
T  5192319 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaag 5192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 391
Target Start/End: Original strand, 6978300 - 6978347
Alignment:
Q  344 gaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaa 6978347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 9060091 - 9060161
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||| | ||||||||||||||||| || |||||  ||||||||||| ||||||||||||||||||||||    
T  9060091 ttagtgaaggaaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattttgcgaccaaa 9060161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 12351725 - 12351658
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||| |||||||| ||||||||||  |||||  |||||||||||||||| |||||||||||||    
T  12351725 ttagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgac 12351658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 33547555 - 33547618
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| |||| ||||||||||| ||||||||| |||||||  |||||||||||||||||||||||    
T  33547555 aaaaattagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaag 33547618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 2669309 - 2669379
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| | || |||||   |||| ||||||||||||||||||||||||||||||||||    
T  2669309 ttagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaa 2669379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 5360418 - 5360480
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||| ||| |||||||||||   ||||| ||||||||||||||||||||||||||||||||||    
T  5360418 aaaaattaacgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaa 5360480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 6605626 - 6605568
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||| |||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  6605626 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgac 6605568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 12499225 - 12499287
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||| |||| ||||||||||   |||||||||||||| |||||||||||||||||||||||||    
T  12499225 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaa 12499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 12506554 - 12506616
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||| |||| ||||||||||   |||||||||||||| |||||||||||||||||||||||||    
T  12506554 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaa 12506616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 12509676 - 12509614
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||| |||| ||||||||||   |||||||||||||| |||||||||||||||||||||||||    
T  12509676 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaa 12509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 14036620 - 14036686
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||| | ||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  14036620 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcga 14036686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 17919568 - 17919606
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17919568 aaatccctctctaattccgtcactaaattttgcgaccaa 17919606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 20692941 - 20692879
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||| |||| ||||||||||   |||||||||||||||| |||||||||||||||||||||||    
T  20692941 aaaaattagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaa 20692879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 13145011 - 13145072
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||  |||||| |||| ||||||||||||||||||||||||||||    
T  13145011 aaaaattagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaa 13145072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 18492389 - 18492438
Alignment:
Q  341 agggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  18492389 agggaaaacgtgaaatcccactctaattccgtcactaaattttgcgacca 18492438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 11431779 - 11431715
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgc 385  Q
    ||||||||| |||||||| |||| |||||  || |||||||| ||||||||||||||||||||||    
T  11431779 ttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgc 11431715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 387
Target Start/End: Original strand, 15448395 - 15448451
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||||||| ||||||||||   |||||||||||||||||||||| ||||||||||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcga 15448451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 5270392 - 5270463
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||||| || ||||| |||||||||   ||||| |||||||||||||||||||||||||| ||| ||||    
T  5270392 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaa 5270463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 12157514 - 12157443
Alignment:
Q  322 tagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||||||||||| |||  |||| | ||||||  ||||||||||||||||||||||||  ||||||||    
T  12157514 tagtgaggaaaatttagagagcaaaaatatgaaatcattctctaattccgtcactaaattttatgaccaaag 12157443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 383
Target Start/End: Complemental strand, 12205321 - 12205262
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaatttt 383  Q
    |||||||||||||   ||||||||||  |||||||||| |||||||||||||||||||||    
T  12205321 gtgaggaaaattttaagagggaaaacgtgaaatccctcactaattccgtcactaaatttt 12205262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 30834099 - 30834028
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaa 392  Q
    ||||||| | |||||||| |||||| |||   ||||||||||||||||| |||| |||||||||||||||||    
T  30834099 ttagtgaaggaaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaa 30834028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 6065451 - 6065509
Alignment:
Q  335 ttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||| ||||||||||||||||| |||||||||||  |||| |||||||||||| |||||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaag 6065509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 15509187 - 15509225
Alignment:
Q  352 gaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  15509187 gaaatccctctctaattccgtcactaaattttccgacca 15509225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 16118146 - 16118212
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||||||| ||||||||  |||||| |||| |||||| |||||||||| ||||| ||||||||||||    
T  16118146 ttagtgagaaaaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcga 16118212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 16250941 - 16250875
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||  |||||| | ||||||||||  |||||| ||||||||||| |||||||||||||||||    
T  16250941 ttagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcga 16250875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 19175884 - 19175846
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  19175884 aaattcctctctaattccgtcactaaattttgcgaccaa 19175846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 22055751 - 22055681
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| || ||||| |||| |||||| ||||||||||||||||||| ||| | ||||||| ||||||    
T  22055751 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaa 22055681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 387
Target Start/End: Original strand, 11350191 - 11350248
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||| |||| |||||||||||  ||||| ||||||||||| |||||||||||||||||    
T  11350191 aaaaattagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcga 11350248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 14772692 - 14772731
Alignment:
Q  352 gaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  14772692 gaaatctctctctaattccgtcactaaattttacgaccaa 14772731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 15961537 - 15961480
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||| |||| ||||||||||   |||| ||||||||||||||| ||||||||||||||    
T  15961537 aaaaattagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcga 15961480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 392
Target Start/End: Complemental strand, 3673233 - 3673201
Alignment:
Q  360 tctctaattccgtcactaaattttgcgaccaaa 392  Q
    |||||||||||||||||||||||| ||||||||    
T  3673233 tctctaattccgtcactaaattttacgaccaaa 3673201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 10929617 - 10929569
Alignment:
Q  340 gagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||||||||| |||||| |||| | ||||||||| |||||||||||||    
T  10929617 gagggaaaacatgaaatctctctttgattccgtcattaaattttgcgac 10929569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 1058 - 988
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1058 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 988  T

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Target: scaffold0219 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 19603 - 19673
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19603 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 19673  T

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Target: scaffold0001 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 8249 - 8179
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8249 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 8179  T

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Target: scaffold0001; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 21981 - 21911
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21981 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 21911  T

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Target: scaffold0001; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 84303 - 84372
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | |||||||||   ||||||||||||||||||||||||||||||||| |||||    
T  84303 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgacca 84372  T

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Target: scaffold0087 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 37926 - 37857
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37926 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgacca 37857  T

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Target: scaffold0599 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 7505 - 7575
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  7505 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 10158 - 10224
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10158 ttagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcga 10224  T

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Target: scaffold0007 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 202774 - 202844
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||| ||||||||||   |||| ||||||||||||||||||||||||||||||||||    
T  202774 ttagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaa 202844  T

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Target: scaffold0007; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 3746 - 3812
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||| |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 3812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 276273 - 276207
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    ||||||||| |||||| | ||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  276273 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

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Target: scaffold0076 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 26483 - 26555
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    ||||||||| | |||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaag 26555  T

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Target: scaffold0006 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 391
Target Start/End: Complemental strand, 121124 - 121056
Alignment:
Q  323 agtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||| || ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  121124 agtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 121056  T

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Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 84804 - 84743
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| ||||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  84804 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaa 84743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 6118 - 6048
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  6118 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaa 6048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 9368 - 9298
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||| ||||||||||   |||||| ||||||||||||||||||||||||||||||||    
T  9368 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaa 9298  T

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Target: scaffold0240 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 15119 - 15059
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 15059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 173456 - 173516
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||| |||||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  173456 atttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaag 173516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 219648 - 219702
Alignment:
Q  333 atttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcga 387  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  219648 atttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcga 219702  T

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Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 182562 - 182600
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||||||||||||||||||||||||||||||||||||||    
T  182562 aaatccctctctaattccgtcactaaattttgcgaccaa 182600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 12653 - 12721
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| |||||| | ||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  12653 ttagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgacca 12721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 22221 - 22278
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgac 22278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 6795 - 6859
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgc 385  Q
    ||||| ||| |||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  6795 ttagtaagggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgc 6859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 43917 - 43989
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaaag 393  Q
    |||||||||||||||||| ||||||||||   |||| | ||||||||||||| | ||||||||||||||||||    
T  43917 ttagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaag 43989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 7460 - 7523
Alignment:
Q  325 tgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    ||||| |||||||| ||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  7460 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgac 7523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 10892 - 10962
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||| |||||||  |||| |||||| ||||| |||||||||||| |||||||||||||| ||||||    
T  10892 ttagtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaa 10962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 112328 - 112398
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    ||||||||||||||| || |||| |||||   |||||||||||||||||||||| |||||||||| |||||    
T  112328 ttagtgaggaaaattcagagaggaaaaacgttaaatccctctctaattccgtcattaaattttgcaaccaa 112398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 10792 - 10735
Alignment:
Q  331 aaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgac 388  Q
    |||||||| ||||||||||   |||| |||||||||||||||||||||||||||||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgac 10735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 39842 - 39773
Alignment:
Q  321 ttagtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    ||||||||| ||||||   ||||||||||  |||||| ||||||||||||||||||||||||||| ||||    
T  39842 ttagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaacca 39773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 3296 - 3232
Alignment:
Q  324 gtgaggaaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||||| ||||||||  |||||||||  |||||||||| ||||||| ||||||||||||||||||||    
T  3296 gtgagggaaatttag--agggaaaacgtgaaatccctcactaattctgtcactaaattttgcgacca 3232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 390
Target Start/End: Complemental strand, 74845 - 74787
Alignment:
Q  333 atttagcgagggaaaa-caagaaatccctctctaattccgtcactaaattttgcgacca 390  Q
    |||||| ||||||||| || |||||||||||||||||| ||||||||||||| ||||||    
T  74845 atttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgacca 74787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 387
Target Start/End: Original strand, 439995 - 440029
Alignment:
Q  353 aaatccctctctaattccgtcactaaattttgcga 387  Q
    |||||||||||||||||||||||||||||||||||    
T  439995 aaatccctctctaattccgtcactaaattttgcga 440029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 1649 - 1588
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| |||||| |||| |||| ||||||||||||  || ||||||||||||||||||    
T  1649 aaaaattagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaa 1588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 19268 - 19207
Alignment:
Q  330 aaaatttagcgagggaaaacaagaaatccctctctaattccgtcactaaattttgcgaccaa 391  Q
    |||| |||| |||||| |||| |||||||||||||||||  ||  |||||||||||||||||    
T  19268 aaaaattagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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