View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20495_low_10 (Length: 252)

Name: NF20495_low_10
Description: NF20495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20495_low_10
NF20495_low_10
[»] chr5 (10 HSPs)
chr5 (45-230)||(547638-547823)
chr5 (1-47)||(41296928-41296974)
chr5 (1-48)||(32094686-32094733)
chr5 (1-47)||(7390012-7390058)
chr5 (1-47)||(12686643-12686689)
chr5 (1-47)||(12692745-12692791)
chr5 (1-47)||(28525850-28525896)
chr5 (1-47)||(28531946-28531992)
chr5 (1-43)||(14609784-14609826)
chr5 (1-47)||(20499787-20499833)
[»] chr1 (11 HSPs)
chr1 (1-48)||(4280194-4280241)
chr1 (1-47)||(1077893-1077939)
chr1 (1-47)||(25275511-25275557)
chr1 (1-47)||(25382000-25382046)
chr1 (1-47)||(31051193-31051239)
chr1 (1-47)||(31057693-31057739)
chr1 (1-47)||(50305846-50305892)
chr1 (1-46)||(25387967-25388012)
chr1 (1-46)||(33458374-33458419)
chr1 (1-46)||(38152422-38152467)
chr1 (1-46)||(27954811-27954856)
[»] chr7 (13 HSPs)
chr7 (1-47)||(26383318-26383364)
chr7 (1-46)||(5849180-5849225)
chr7 (1-46)||(35152993-35153038)
chr7 (4-47)||(26380757-26380800)
chr7 (1-47)||(339030-339076)
chr7 (1-47)||(351436-351482)
chr7 (1-47)||(3811633-3811679)
chr7 (1-47)||(28421423-28421469)
chr7 (1-47)||(35148473-35148519)
chr7 (1-47)||(3817775-3817821)
chr7 (1-46)||(22742394-22742439)
chr7 (1-46)||(43539645-43539690)
chr7 (2-46)||(30219540-30219584)
[»] chr4 (11 HSPs)
chr4 (1-47)||(6257669-6257715)
chr4 (1-47)||(10733814-10733860)
chr4 (1-47)||(10739801-10739847)
chr4 (1-47)||(10947583-10947629)
chr4 (1-47)||(10953570-10953616)
chr4 (1-47)||(48160608-48160654)
chr4 (1-47)||(48166827-48166873)
chr4 (1-47)||(24287636-24287682)
chr4 (1-47)||(26957268-26957314)
chr4 (2-47)||(26972020-26972065)
chr4 (1-46)||(50426897-50426942)
[»] chr3 (19 HSPs)
chr3 (1-47)||(8331436-8331482)
chr3 (1-47)||(10761115-10761161)
chr3 (1-47)||(10769434-10769480)
chr3 (1-47)||(30051565-30051611)
chr3 (1-46)||(53071716-53071761)
chr3 (1-47)||(11840190-11840236)
chr3 (1-47)||(17056256-17056302)
chr3 (1-47)||(23138881-23138927)
chr3 (1-47)||(26429882-26429928)
chr3 (1-47)||(28964529-28964575)
chr3 (1-47)||(38449528-38449574)
chr3 (1-47)||(42191685-42191731)
chr3 (1-47)||(42197627-42197673)
chr3 (1-47)||(49151261-49151307)
chr3 (1-47)||(49157328-49157374)
chr3 (1-46)||(24643955-24644000)
chr3 (1-47)||(10238677-10238723)
chr3 (1-47)||(10244799-10244845)
chr3 (1-47)||(38456015-38456061)
[»] chr6 (8 HSPs)
chr6 (1-48)||(17581252-17581299)
chr6 (1-47)||(4580786-4580832)
chr6 (1-47)||(8651268-8651314)
chr6 (1-47)||(21771029-21771075)
chr6 (1-47)||(25343276-25343322)
chr6 (1-47)||(25353862-25353908)
chr6 (1-48)||(21783790-21783837)
chr6 (1-46)||(31756683-31756728)
[»] scaffold0440 (1 HSPs)
scaffold0440 (1-47)||(1652-1698)
[»] scaffold0208 (1 HSPs)
scaffold0208 (1-47)||(12044-12090)
[»] chr8 (12 HSPs)
chr8 (1-47)||(10705487-10705533)
chr8 (1-47)||(32890537-32890583)
chr8 (1-47)||(32896661-32896707)
chr8 (1-47)||(36818621-36818667)
chr8 (1-47)||(39727749-39727795)
chr8 (1-47)||(39736003-39736049)
chr8 (1-47)||(42033446-42033492)
chr8 (1-46)||(10699679-10699724)
chr8 (1-46)||(14417611-14417656)
chr8 (1-46)||(42993464-42993509)
chr8 (1-47)||(22220192-22220238)
chr8 (1-46)||(9934933-9934978)
[»] chr2 (13 HSPs)
chr2 (1-47)||(13455748-13455794)
chr2 (1-47)||(13461689-13461735)
chr2 (1-47)||(19879243-19879289)
chr2 (1-47)||(30964976-30965022)
chr2 (1-47)||(31002025-31002071)
chr2 (1-47)||(31008003-31008049)
chr2 (1-47)||(35085144-35085190)
chr2 (1-47)||(35091117-35091163)
chr2 (1-47)||(36750063-36750109)
chr2 (1-47)||(44717270-44717316)
chr2 (1-46)||(28683409-28683454)
chr2 (1-47)||(35442297-35442343)
chr2 (1-46)||(35439835-35439880)
[»] scaffold1114 (1 HSPs)
scaffold1114 (1-46)||(713-758)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-46)||(1063-1108)
[»] scaffold0185 (1 HSPs)
scaffold0185 (1-46)||(5617-5662)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-45)||(173354-173398)


Alignment Details
Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 45 - 230
Target Start/End: Complemental strand, 547823 - 547638
Alignment:
Q  45 tagtagaaagtttacgtaaaagcaaggcatcgttggaatgttcccatttattggcatcgt-tggactgcaagaagacactcatatgttcatgggaaagat 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   | |||||||||||||||||||||||||||||||||||||    
T  547823 tagtagaaagtttacgtaaaagcaaggcatcgttggaatgttcccatttattga-atcaccttgactgcaagaagacactcatatgttcatgggaaagat 547725  T
Q  144 gtgacttatctacttgtatcggtccagaggaagtagttgatgattaagatgcgtatcacattttcatacattattgattgtttgcta 230  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  547724 gtgacttatctacttgtatcagtccagaggaagtagttgatgattaagatgcatatcacattttcatacattgttgattgtttgcta 547638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41296974 - 41296928
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  41296974 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 41296928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32094686 - 32094733
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatagt 48  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  32094686 tacttaatttgatcactaatcaattaaggctcacaattgataaatagt 32094733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7390012 - 7390058
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  7390012 tacttaatttgatcactaatcaactaagactcacaattgataaatag 7390058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12686643 - 12686689
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  12686643 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 12686689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12692745 - 12692791
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  12692745 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 12692791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28525850 - 28525896
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  28525850 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 28525896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28531946 - 28531992
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  28531946 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 28531992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14609826 - 14609784
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataa 43  Q
    ||||||||||||||||||||||| | ||| |||||||||||||    
T  14609826 tacttaatttgatcactaatcaattaaggctcacaattgataa 14609784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20499833 - 20499787
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||  |||||||||||||||||    
T  20499833 tacttaatttgatcactaatcaattaagactcacaattgataaatag 20499787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4280194 - 4280241
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatagt 48  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  4280194 tacttaatttgatcactaatcaattaaggttcacaattgataaatagt 4280241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1077939 - 1077893
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  1077939 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 1077893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25275511 - 25275557
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  25275511 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 25275557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25382000 - 25382046
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  25382000 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 25382046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31051239 - 31051193
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  31051239 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 31051193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31057739 - 31057693
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  31057739 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 31057693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50305892 - 50305846
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  50305892 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 50305846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25387967 - 25388012
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  25387967 tacttaatttgatcactaatcaattaaggctcacaattgataaata 25388012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33458374 - 33458419
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  33458374 tacttaatttgatcactaatcaattaaggctcacaattgataaata 33458419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38152422 - 38152467
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||    
T  38152422 tacttaatttgatcactaatcaactaaggcccacaattgataaata 38152467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27954856 - 27954811
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||    
T  27954856 tacttaatttgatcactaatcaattaagcctcacaattgataaata 27954811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26383364 - 26383318
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  26383364 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 26383318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5849225 - 5849180
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  5849225 tacttaatttgatcactaatcaactaaggctcacaattgataaata 5849180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35152993 - 35153038
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  35152993 tacttaatttgatcactaatcaactaaggctcacaattgataaata 35153038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 26380800 - 26380757
Alignment:
Q  4 ttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  26380800 ttaatttgatcactaatcaactaaggctcacaattgataaatag 26380757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 339076 - 339030
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||    
T  339076 tacttaatttgatcactaatcaactaaggctgacaattgataaatag 339030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 351482 - 351436
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||    
T  351482 tacttaatttgatcactaatcaactaaggctgacaattgataaatag 351436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3811633 - 3811679
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  3811633 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 3811679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28421423 - 28421469
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  28421423 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 28421469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35148473 - 35148519
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  35148473 tacttaatttgatcactaatcaactaaggctcataattgataaatag 35148519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3817775 - 3817821
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    |||||||||| |||||||||||||| |||  ||||||||||||||||    
T  3817775 tacttaatttcatcactaatcaactaaggcccacaattgataaatag 3817821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22742394 - 22742439
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    |||||||||| |||||||||||||| ||| ||||| ||||||||||    
T  22742394 tacttaattttatcactaatcaactaaggctcacagttgataaata 22742439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43539690 - 43539645
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||| |||||| |||||||||    
T  43539690 tacttaatttgatcactaatcaattaaggctcacaaatgataaata 43539645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 30219540 - 30219584
Alignment:
Q  2 acttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    |||||||||||||||||||||| | ||| |||||||| |||||||    
T  30219540 acttaatttgatcactaatcaattaaggctcacaattaataaata 30219584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6257669 - 6257715
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6257669 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 6257715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10733814 - 10733860
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10733814 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 10733860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10739801 - 10739847
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10739801 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 10739847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10947583 - 10947629
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10947583 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 10947629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10953570 - 10953616
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10953570 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 10953616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48160654 - 48160608
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  48160654 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 48160608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48166873 - 48166827
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  48166873 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 48166827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24287682 - 24287636
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||| ||||||||    
T  24287682 tacttaatttgatcactaatcaattaaggctcacaatttataaatag 24287636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26957268 - 26957314
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    |||||||||||||||||||| || | ||| |||||||||||||||||    
T  26957268 tacttaatttgatcactaattaattaaggctcacaattgataaatag 26957314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 26972020 - 26972065
Alignment:
Q  2 acttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    |||||||||||||||||||||| | ||  |||||||||||||||||    
T  26972020 acttaatttgatcactaatcaattaagactcacaattgataaatag 26972065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 50426942 - 50426897
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  50426942 tacttaatttgatcactaatcaattaaggctcacacttgataaata 50426897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8331482 - 8331436
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  8331482 tacttaatttgatcactaatcaactaaggtccacaattgataaatag 8331436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10761115 - 10761161
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10761115 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 10761161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10769434 - 10769480
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10769434 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 10769480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30051565 - 30051611
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  30051565 tacttaatttgatcactaatcaactaaggctcacaattgataaatag 30051611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 53071716 - 53071761
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  53071716 tacttaatttgatcactaatcaactaaggctcacaattgataaata 53071761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11840190 - 11840236
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  11840190 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 11840236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17056256 - 17056302
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  17056256 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 17056302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23138881 - 23138927
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  23138881 tacttaatttgatcactaatcaactaagactcacaattgataaatag 23138927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26429882 - 26429928
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  26429882 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 26429928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28964575 - 28964529
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  28964575 tacttaatttgatcactaatcaactaaggctcacaatttataaatag 28964529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38449528 - 38449574
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  38449528 tacttaatttgatcactaatcaactaagactcacaattgataaatag 38449574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42191685 - 42191731
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  42191685 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 42191731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42197627 - 42197673
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  42197627 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 42197673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49151307 - 49151261
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  49151307 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 49151261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49157374 - 49157328
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  49157374 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 49157328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24643955 - 24644000
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  24643955 tacttaatttgatcactaatcaactaagactcacaattgataaata 24644000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10238677 - 10238723
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    |||||||||||| |||||||||| | ||| |||||||||||||||||    
T  10238677 tacttaatttgaacactaatcaattaaggctcacaattgataaatag 10238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10244799 - 10244845
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    |||||||||||| |||||||||| | ||| |||||||||||||||||    
T  10244799 tacttaatttgaacactaatcaattaaggctcacaattgataaatag 10244845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38456015 - 38456061
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |   |||||||||||||||||    
T  38456015 tacttaatttgatcactaatcaactaacactcacaattgataaatag 38456061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17581299 - 17581252
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatagt 48  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  17581299 tacttaatttgatcactaatcaattgaggctcacaattgataaatagt 17581252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4580786 - 4580832
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  4580786 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 4580832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8651268 - 8651314
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  8651268 tacttaatttgatcactaatcaactaagactcacaattgataaatag 8651314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21771029 - 21771075
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  21771029 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 21771075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25343322 - 25343276
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    |||||||||| |||||||||||| | |||||||||||||||||||||    
T  25343322 tacttaatttaatcactaatcaattaaggttcacaattgataaatag 25343276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25353908 - 25353862
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  25353908 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 25353862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21783790 - 21783837
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatagt 48  Q
    ||||||||||||||||||||| ||| ||  ||||||||||||||||||    
T  21783790 tacttaatttgatcactaatccactaagactcacaattgataaatagt 21783837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31756683 - 31756728
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||||| ||   |||||||||||||||    
T  31756683 tacttaatttgatcactaatcaactaagacccacaattgataaata 31756728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1652 - 1698
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  1652 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 1698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12090 - 12044
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  12090 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 12044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10705533 - 10705487
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  10705533 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 10705487  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32890583 - 32890537
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  32890583 tacttaatttgatcactaatcaattaagggtcacaattgataaatag 32890537  T

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Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32896707 - 32896661
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  32896707 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 32896661  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36818667 - 36818621
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  36818667 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 36818621  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39727749 - 39727795
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  39727749 tacttaatttgatcactaatcaactaagtctcacaattgataaatag 39727795  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39736003 - 39736049
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||    
T  39736003 tacttaatttgatcactaatcaactaatgctcacaattgataaatag 39736049  T

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Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42033492 - 42033446
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  42033492 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 42033446  T

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Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10699724 - 10699679
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  10699724 tacttaatttgatcactaatcaattaaggctcacaattgataaata 10699679  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14417656 - 14417611
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  14417656 tacttaatttgatcactaatcaactaagactcacaattgataaata 14417611  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42993464 - 42993509
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  42993464 tacttaatttgatcactaatcaattaaggctcacaattgataaata 42993509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22220192 - 22220238
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| | || ||||||||||||    
T  22220192 tacttaatttgatcactaatcaactaaggcttacgattgataaatag 22220238  T

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Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9934978 - 9934933
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||    
T  9934978 tacttaatttgatcactaatcaattaagactcacaattgataaata 9934933  T

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Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13455794 - 13455748
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  13455794 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 13455748  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13461735 - 13461689
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  13461735 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 13461689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19879289 - 19879243
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  19879289 tacttaatttgatcactaatcaactaaggctcacaattaataaatag 19879243  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30965022 - 30964976
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  30965022 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 30964976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31002071 - 31002025
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  31002071 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 31002025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31008049 - 31008003
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  31008049 tacttaatttgatcactaatcaactaaggcccacaattgataaatag 31008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35085144 - 35085190
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  35085144 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 35085190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35091117 - 35091163
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  35091117 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 35091163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36750109 - 36750063
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  36750109 tacttaatttgatcactaatcaattaaggctcacaattgataaatag 36750063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44717270 - 44717316
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  44717270 tacttaatttgatcactaatcaactaagactcacaattgataaatag 44717316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28683409 - 28683454
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||    
T  28683409 tacttaatttgatcactaatcaactaaggcccacaattgataaata 28683454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35442297 - 35442343
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaatag 47  Q
    |||||||||||||||||||||||   ||| |||||||||||||||||    
T  35442297 tacttaatttgatcactaatcaatcaaggctcacaattgataaatag 35442343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35439835 - 35439880
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||    
T  35439835 tacttaatttgatcactaatcaatcaaggctcacaattgataaata 35439880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 758 - 713
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  758 tacttaatttgatcactaatcaattgaggctcacaattgataaata 713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1063 - 1108
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  1063 tacttaatttgatcactaatcaactaagactcacaattgataaata 1108  T

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Target: scaffold0185 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5662 - 5617
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaata 46  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  5662 tacttaatttgatcactaatcaattaaggctcacaattgataaata 5617  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 173354 - 173398
Alignment:
Q  1 tacttaatttgatcactaatcaacttaggttcacaattgataaat 45  Q
    ||||||||||||||||||||||||| ||   ||||||||||||||    
T  173354 tacttaatttgatcactaatcaactaagacccacaattgataaat 173398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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