View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20496_low_11 (Length: 495)

Name: NF20496_low_11
Description: NF20496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20496_low_11
NF20496_low_11
[»] chr8 (30 HSPs)
chr8 (210-477)||(1788791-1789058)
chr8 (316-455)||(39655697-39655836)
chr8 (316-478)||(17028313-17028474)
chr8 (316-478)||(17558749-17558910)
chr8 (15-148)||(25820716-25820849)
chr8 (316-433)||(21185319-21185436)
chr8 (316-470)||(38678652-38678803)
chr8 (16-148)||(2085809-2085942)
chr8 (15-97)||(1788650-1788732)
chr8 (16-148)||(18040548-18040680)
chr8 (44-144)||(10532860-10532960)
chr8 (16-148)||(32009080-32009213)
chr8 (370-464)||(38676279-38676373)
chr8 (15-148)||(7454733-7454867)
chr8 (51-148)||(18574084-18574181)
chr8 (42-148)||(41280876-41280982)
chr8 (15-148)||(7999649-7999781)
chr8 (349-478)||(21347069-21347198)
chr8 (343-478)||(4326700-4326834)
chr8 (15-148)||(24060557-24060691)
chr8 (18-117)||(33273604-33273704)
chr8 (66-148)||(11709419-11709501)
chr8 (16-144)||(24033762-24033894)
chr8 (316-356)||(38676893-38676933)
chr8 (316-354)||(17088768-17088806)
chr8 (320-386)||(31183750-31183816)
chr8 (42-109)||(15604526-15604593)
chr8 (42-109)||(15612877-15612944)
chr8 (319-401)||(4977390-4977471)
chr8 (78-143)||(22609564-22609631)
[»] chr4 (29 HSPs)
chr4 (212-472)||(6667613-6667871)
chr4 (212-472)||(6671285-6671537)
chr4 (316-478)||(13010531-13010692)
chr4 (15-148)||(17282557-17282690)
chr4 (15-148)||(25239694-25239827)
chr4 (15-148)||(13861313-13861446)
chr4 (316-437)||(44643451-44643571)
chr4 (316-415)||(895463-895562)
chr4 (16-148)||(3270546-3270679)
chr4 (16-148)||(10985780-10985912)
chr4 (16-148)||(21332611-21332743)
chr4 (16-148)||(12885280-12885413)
chr4 (16-148)||(3268334-3268467)
chr4 (316-392)||(20058101-20058177)
chr4 (45-146)||(9901770-9901871)
chr4 (320-472)||(31767450-31767601)
chr4 (320-471)||(43287813-43287964)
chr4 (44-144)||(49402721-49402821)
chr4 (42-109)||(12217588-12217655)
chr4 (15-80)||(18284661-18284725)
chr4 (42-148)||(26780882-26780988)
chr4 (15-75)||(10422046-10422106)
chr4 (18-144)||(8082047-8082173)
chr4 (316-433)||(11914061-11914176)
chr4 (16-116)||(28891910-28892009)
chr4 (42-148)||(34845524-34845630)
chr4 (78-148)||(45313209-45313279)
chr4 (320-454)||(13250527-13250661)
chr4 (92-148)||(16396333-16396389)
[»] chr7 (28 HSPs)
chr7 (212-437)||(31209969-31210194)
chr7 (212-437)||(31206533-31206745)
chr7 (318-477)||(11673960-11674118)
chr7 (15-148)||(47295748-47295881)
chr7 (319-454)||(39426452-39426587)
chr7 (15-148)||(21592944-21593077)
chr7 (319-478)||(3850540-3850700)
chr7 (18-148)||(18153131-18153261)
chr7 (15-148)||(18185624-18185757)
chr7 (316-391)||(22301149-22301224)
chr7 (18-144)||(30770257-30770384)
chr7 (327-478)||(5434870-5435022)
chr7 (15-148)||(29164848-29164982)
chr7 (45-148)||(20093566-20093669)
chr7 (16-148)||(21802450-21802583)
chr7 (233-401)||(13815772-13815940)
chr7 (316-437)||(15569565-15569685)
chr7 (321-471)||(32352432-32352581)
chr7 (16-119)||(22703896-22704000)
chr7 (16-148)||(9549035-9549168)
chr7 (72-148)||(7595406-7595482)
chr7 (15-147)||(2250059-2250193)
chr7 (65-148)||(22705649-22705732)
chr7 (316-443)||(2609600-2609726)
chr7 (238-393)||(15169978-15170131)
chr7 (15-148)||(28794094-28794227)
chr7 (81-148)||(30765047-30765114)
chr7 (78-148)||(38612620-38612690)
[»] chr6 (33 HSPs)
chr6 (319-477)||(19697846-19698004)
chr6 (18-148)||(29095084-29095214)
chr6 (316-407)||(6591847-6591938)
chr6 (244-436)||(3835586-3835777)
chr6 (233-401)||(24044848-24045016)
chr6 (37-144)||(7968565-7968672)
chr6 (17-148)||(18014524-18014656)
chr6 (44-148)||(19860118-19860222)
chr6 (16-148)||(4409196-4409329)
chr6 (16-125)||(8306064-8306170)
chr6 (233-401)||(24041545-24041713)
chr6 (15-148)||(12738494-12738628)
chr6 (44-148)||(18736029-18736133)
chr6 (15-144)||(23574393-23574523)
chr6 (16-147)||(18043340-18043472)
chr6 (15-148)||(18258661-18258795)
chr6 (15-148)||(14910604-14910739)
chr6 (43-148)||(15349695-15349800)
chr6 (15-148)||(29482590-29482724)
chr6 (403-478)||(15517998-15518073)
chr6 (42-148)||(15119787-15119891)
chr6 (16-148)||(24438628-24438760)
chr6 (42-148)||(18728948-18729054)
chr6 (43-148)||(15319045-15319150)
chr6 (325-378)||(15518074-15518127)
chr6 (92-148)||(17757084-17757140)
chr6 (72-148)||(3876375-3876451)
chr6 (316-374)||(19973730-19973787)
chr6 (79-144)||(23524128-23524193)
chr6 (338-393)||(14579662-14579716)
chr6 (294-376)||(2936125-2936205)
chr6 (44-148)||(15369691-15369795)
chr6 (42-109)||(19885769-19885837)
[»] chr2 (24 HSPs)
chr2 (316-478)||(2590458-2590620)
chr2 (320-477)||(18739113-18739270)
chr2 (316-475)||(21189362-21189521)
chr2 (316-477)||(14433597-14433759)
chr2 (315-478)||(35969274-35969433)
chr2 (336-467)||(1043114-1043244)
chr2 (16-148)||(41266262-41266396)
chr2 (42-148)||(42534189-42534295)
chr2 (15-148)||(27347170-27347302)
chr2 (15-148)||(23929796-23929930)
chr2 (237-414)||(8424484-8424661)
chr2 (215-313)||(1043480-1043579)
chr2 (16-148)||(23755885-23756018)
chr2 (42-144)||(25134004-25134106)
chr2 (16-144)||(3770260-3770389)
chr2 (16-148)||(29568315-29568448)
chr2 (15-148)||(3105203-3105337)
chr2 (256-383)||(10941364-10941489)
chr2 (256-383)||(10947233-10947358)
chr2 (66-148)||(26155049-26155131)
chr2 (320-401)||(27083092-27083173)
chr2 (47-148)||(19092753-19092854)
chr2 (16-94)||(26159154-26159233)
chr2 (256-367)||(10938003-10938112)
[»] scaffold0014 (1 HSPs)
scaffold0014 (318-477)||(82580-82739)
[»] chr1 (25 HSPs)
chr1 (316-478)||(24981160-24981322)
chr1 (316-478)||(12141650-12141812)
chr1 (343-478)||(1953645-1953780)
chr1 (15-148)||(24973953-24974086)
chr1 (317-478)||(47580352-47580515)
chr1 (15-148)||(21817805-21817938)
chr1 (15-148)||(22186053-22186186)
chr1 (316-437)||(4242567-4242688)
chr1 (319-478)||(51465454-51465601)
chr1 (319-399)||(9111542-9111622)
chr1 (15-119)||(21815619-21815723)
chr1 (320-470)||(43254081-43254230)
chr1 (15-148)||(8990828-8990962)
chr1 (233-401)||(49387521-49387689)
chr1 (320-471)||(38825479-38825630)
chr1 (16-148)||(19442177-19442310)
chr1 (16-145)||(19967488-19967618)
chr1 (42-148)||(8995505-8995610)
chr1 (44-148)||(9858996-9859104)
chr1 (42-144)||(38621830-38621932)
chr1 (352-464)||(39197184-39197297)
chr1 (320-472)||(38828689-38828841)
chr1 (24-109)||(170684-170769)
chr1 (320-392)||(21501252-21501323)
chr1 (352-392)||(49390928-49390968)
[»] chr5 (22 HSPs)
chr5 (316-478)||(18594772-18594934)
chr5 (15-144)||(36712720-36712849)
chr5 (15-148)||(5590764-5590897)
chr5 (15-148)||(23495348-23495481)
chr5 (316-470)||(26703015-26703170)
chr5 (316-470)||(26972748-26972903)
chr5 (15-148)||(20899663-20899796)
chr5 (316-475)||(39292066-39292218)
chr5 (22-148)||(33622557-33622686)
chr5 (15-148)||(28068090-28068224)
chr5 (15-148)||(38608266-38608400)
chr5 (16-148)||(42792481-42792614)
chr5 (42-148)||(15620258-15620364)
chr5 (16-148)||(5931190-5931323)
chr5 (15-148)||(22922705-22922839)
chr5 (75-148)||(41037712-41037785)
chr5 (15-148)||(22922108-22922242)
chr5 (317-443)||(13291946-13292071)
chr5 (230-299)||(31307320-31307390)
chr5 (87-148)||(19329991-19330052)
chr5 (16-100)||(8244511-8244596)
chr5 (44-117)||(23927179-23927252)
[»] scaffold0265 (2 HSPs)
scaffold0265 (15-148)||(14871-15004)
scaffold0265 (15-119)||(17086-17190)
[»] scaffold0362 (1 HSPs)
scaffold0362 (15-148)||(7417-7549)
[»] scaffold0096 (1 HSPs)
scaffold0096 (15-148)||(10939-11072)
[»] scaffold0028 (2 HSPs)
scaffold0028 (316-437)||(127699-127819)
scaffold0028 (320-437)||(110120-110236)
[»] scaffold0084 (1 HSPs)
scaffold0084 (48-148)||(54670-54770)
[»] scaffold0034 (1 HSPs)
scaffold0034 (16-148)||(47482-47615)
[»] scaffold0076 (1 HSPs)
scaffold0076 (302-436)||(6745-6877)
[»] scaffold0293 (1 HSPs)
scaffold0293 (237-417)||(4844-5024)
[»] chr3 (18 HSPs)
chr3 (338-478)||(11634190-11634330)
chr3 (40-148)||(16853075-16853183)
chr3 (320-472)||(19930038-19930188)
chr3 (15-148)||(22915051-22915185)
chr3 (86-148)||(19790346-19790408)
chr3 (316-415)||(9372210-9372309)
chr3 (320-392)||(42253564-42253635)
chr3 (316-436)||(2353196-2353315)
chr3 (320-415)||(26445096-26445191)
chr3 (15-90)||(19773385-19773462)
chr3 (16-96)||(1998006-1998087)
chr3 (73-146)||(16914764-16914837)
chr3 (320-381)||(19935237-19935297)
chr3 (41-110)||(22006518-22006587)
chr3 (41-110)||(22014035-22014104)
chr3 (91-148)||(44635823-44635880)
chr3 (334-392)||(14658173-14658230)
chr3 (44-117)||(36639623-36639696)
[»] scaffold0002 (2 HSPs)
scaffold0002 (15-148)||(391458-391592)
scaffold0002 (17-148)||(380763-380894)
[»] scaffold0007 (1 HSPs)
scaffold0007 (212-324)||(26200-26311)
[»] scaffold0042 (2 HSPs)
scaffold0042 (42-148)||(68700-68806)
scaffold0042 (42-148)||(74872-74978)
[»] scaffold0083 (1 HSPs)
scaffold0083 (15-146)||(4265-4397)
[»] scaffold0058 (2 HSPs)
scaffold0058 (17-148)||(1609-1741)
scaffold0058 (15-148)||(15364-15498)
[»] scaffold0170 (1 HSPs)
scaffold0170 (44-148)||(16382-16487)
[»] scaffold0008 (2 HSPs)
scaffold0008 (15-148)||(253312-253446)
scaffold0008 (73-148)||(242731-242806)
[»] scaffold0299 (1 HSPs)
scaffold0299 (16-119)||(19150-19254)
[»] scaffold0280 (1 HSPs)
scaffold0280 (19-148)||(1107-1237)
[»] scaffold0026 (1 HSPs)
scaffold0026 (16-148)||(151357-151490)
[»] scaffold0989 (1 HSPs)
scaffold0989 (16-119)||(1617-1721)
[»] scaffold0150 (1 HSPs)
scaffold0150 (42-148)||(30124-30230)
[»] scaffold0111 (1 HSPs)
scaffold0111 (42-148)||(2897-3002)
[»] scaffold0192 (1 HSPs)
scaffold0192 (65-148)||(12373-12456)
[»] scaffold0013 (1 HSPs)
scaffold0013 (66-148)||(37292-37374)
[»] scaffold0025 (1 HSPs)
scaffold0025 (15-144)||(86433-86563)
[»] scaffold0011 (1 HSPs)
scaffold0011 (44-110)||(20389-20455)
[»] scaffold0216 (1 HSPs)
scaffold0216 (355-437)||(12112-12194)
[»] scaffold0063 (1 HSPs)
scaffold0063 (66-148)||(36846-36928)
[»] scaffold0933 (1 HSPs)
scaffold0933 (320-376)||(804-859)


Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 210 - 477
Target Start/End: Original strand, 1788791 - 1789058
Alignment:
Q  210 gggagaacaataaacttatctgtggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaaaaagtaaaccat 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1788791 gggagaacaataaacttatctgtggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataacctgccaaaaagtaaaccat 1788890  T
Q  310 tacataaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatga 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1788891 tacataaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatga 1788990  T
Q  410 atcataaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1788991 atcataaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 1789058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 316 - 455
Target Start/End: Original strand, 39655697 - 39655836
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||    
T  39655697 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagtgcatatcctcccatgatacaacagttcttctccgttatgaatcata 39655796  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagata 455  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  39655797 accggatgtgacagaacagctcaaatttatctcaaagata 39655836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 316 - 478
Target Start/End: Complemental strand, 17028474 - 17028313
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  17028474 aacctgaggcgtgacacagtcactgtccttgaggattttatccgcctcattagcgcatatcctcccaggatatgacagttcttccccgttatgaatcata 17028375  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    ||||||||||||| |||| ||||||| |||  || |||||||| ||||||||||| |||||||    
T  17028374 accggaggtgacacaacagctcaaatatat-acacagatatcaggagatgtaacctagaaact 17028313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 316 - 478
Target Start/End: Complemental strand, 17558910 - 17558749
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  17558910 aacctgaggcgtgacacagtcactgtccttgaggattttatccgcctcattagcgcatatcctcccaggatatgacagttcttccccgttatgaatcata 17558811  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    ||||||||||||| |||| ||||||| |||  || |||||||| ||||||||||| |||||||    
T  17558810 accggaggtgacacaacagctcaaatatat-acacagatatcaggagatgtaacctagaaact 17558749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 25820716 - 25820849
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||| |||||||||||| |||    
T  25820716 cagagagtaagggtttgagaggaagaaagattctaccatggggactgcattgagtcccctatttttagaggtggagggctgcaaagccgttgtaatggca 25820815  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||||||||||||||||||||||||||    
T  25820816 caccttactctgacggttacgaaatcgtgggaag 25820849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 316 - 433
Target Start/End: Original strand, 21185319 - 21185436
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  21185319 aacctgaagcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccagcatataatagttcttccccgttatgaatcata 21185418  T
Q  416 accggaggtgacagaaca 433  Q
    ||||||||||||| ||||    
T  21185419 accggaggtgacaaaaca 21185436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 316 - 470
Target Start/End: Complemental strand, 38678803 - 38678652
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    |||||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||  |||||||||||||||  ||||||||||||||||||    
T  38678803 aacctgaggcgtgacatagtca-tgtctttgaggatttgatccgtctcataagcgcatatccttacaggatacaacagtt--tccccgttatgaatcata 38678707  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacc 470  Q
    | |||||||||||||||||||||||||||||| ||||||| || |||||| ||||    
T  38678706 atcggaggtgacagaacaactcaaatttatcttaaagataacaagagatgcaacc 38678652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 2085942 - 2085809
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||    
T  2085942 agagagtgagggttt-agaggaagagatagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagaaccgttgtaatggc 2085844  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  ||||| |||||||||||||||||||||    
T  2085843 acacctggctctggcggttacgaaatcgtgggaag 2085809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 1788650 - 1788732
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgca 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1788650 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgca 1788732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 18040680 - 18040548
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||| ||||| ||||||||| |  ||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| ||    
T  18040680 agagagtgaaggttt-agaggaagagattgattctaccttggggactgc-ttgagtcccctatttatagaggtggagagctgcagagccgttgtaatggc 18040583  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  |||||||||||||||||||||||||||    
T  18040582 acacctggctctgacggttacgaaatcgtgggaag 18040548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 10532960 - 10532860
Alignment:
Q  44 attctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtg 143  Q
    |||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  10532960 attctaccttggggactccattaagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctgactctggcggttacgaaatcgtg 10532861  T
Q  144 g 144  Q
    |    
T  10532860 g 10532860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 32009213 - 32009080
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  |||| |||||||| || | | ||||||| |||||||||||||||||||||||| |||||||||||||| ||    
T  32009213 agagagtgagggttt-agaggaagagatagattttaccttggggagtactttgagtcccctatttatagaggtggagggctgtagagccgttgtaatggc 32009115  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||| |||||| |||||||||||||||||||||    
T  32009114 acacctgactctggcggttacgaaatcgtgggaag 32009080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 370 - 464
Target Start/End: Complemental strand, 38676373 - 38676279
Alignment:
Q  370 gcatatcctcccaggatacaacagttcttccccgttatgaatcataaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagat 464  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| || |||||    
T  38676373 gcatatcctcccaggatacaacaattcttccccgttatgaatcataatcggaggtgacagaacaactcaaatttattttaaagataacaggagat 38676279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 7454867 - 7454733
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| | ||||||| |  ||||||| ||||| ||||||  |||||| |||||||||||||||||| |||||||||||||||||||| |    
T  7454867 cagagagtgagggttt-acaggaagagatagattctaacttggggactgctatgagtcccctatttatagaggtggaaggctgcagagccgttgtaatgg 7454769  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||  ||||| |||||||||||||||||||||    
T  7454768 cacacctggctctggcggttacgaaatcgtgggaag 7454733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 18574181 - 18574084
Alignment:
Q  51 cttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| || ||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  18574181 cttggggaatgctttgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggctctggcggttacgaaatcgtgggaag 18574084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 41280982 - 41280876
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||| |||||   |||||| |||||||||||||||||||| |||||||||||||||||| |||||||| ||||||  |||||| ||||||    
T  41280982 agattctaccttggggactgttatgagtcccctatttatagaggtggaggactgcagagccgttgtaatggcacacctgactctgggggttacaaaatcg 41280883  T
Q  142 tgggaag 148  Q
    |||||||    
T  41280882 tgggaag 41280876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 7999649 - 7999781
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |  ||||||||||||| ||||||  |||||||||| |||||||||||||||| ||||  ||||||||||||      
T  7999649 cagagagtgagggttt-agaggaagagatagattctaccttggggactgccgtgagtctcctgtttatagaggtggaggactgc--agccgttgtaatga 7999745  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||  ||||| |||||||||||||||||||||    
T  7999746 cacacctggctctggcggttacgaaatcgtgggaag 7999781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 349 - 478
Target Start/End: Complemental strand, 21347198 - 21347069
Alignment:
Q  349 gattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataaccggaggtgacagaacaactcaaatttatctc 448  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||||| | |||||||||||||||  | ||||||| |||||||| ||| | |||||    
T  21347198 gattttatccgcctcataagcacatatcctcccaagatacaactgttctttcacgttatgaatcataaatgaaggtgacggaacaactgaaaataatctc 21347099  T
Q  449 aaagatatcatgagatgtaacccagaaact 478  Q
    ||||| | |  ||||||||||||| |||||    
T  21347098 aaagacaaccggagatgtaacccacaaact 21347069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 478
Target Start/End: Original strand, 4326700 - 4326834
Alignment:
Q  343 cttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataaccggaggtgacagaacaactcaaatt 442  Q
    |||||||||||||||  ||| |||  || ||||||| | |||||||| || |||||| ||||||||||| ||||| ||| ||||||||||||||||||||    
T  4326700 cttgaggattttatcaaccttatagacgaatatcctgctaggataca-catttcttctccgttatgaatgataacaggatgtgacagaacaactcaaatt 4326798  T
Q  443 tatctcaaagatatcatgagatgtaacccagaaact 478  Q
    |||| ||||||| | |  |||||||| |||||||||    
T  4326799 tatcacaaagatgttagaagatgtaatccagaaact 4326834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 24060557 - 24060691
Alignment:
Q  15 cagagagtgagggtttgagaggaag--aaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||| ||||||||||| ||||||||  | |||||||||||||| ||||||   ||||| | ||| |||||||||||||||||||||||||||||| || |    
T  24060557 cagatagtgagggttt-agaggaagcgatagattctaccttggagactgctaagagtcccttatatatagaggtggagggctgcagagccgttgtgatgg 24060655  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||   ||||| ||||||| ||||||| |||||    
T  24060656 cacaccaggctctggcggttacaaaatcgtaggaag 24060691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 33273704 - 33273604
Alignment:
Q  18 agagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcaca 116  Q
    ||||||||||||| ||||   ||| |||||||||||||| |||| |  |||||| ||||||||||||||||||||| ||||||||||||||||| |||||    
T  33273704 agagtgagggtttagagaaagagatagattctaccttggggactcctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatggcaca 33273605  T
Q  117 c 117  Q
    |    
T  33273604 c 33273604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 11709419 - 11709501
Alignment:
Q  66 gagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||||| |||||||   ||||| |  ||||||||||||||||||    
T  11709419 gagtcccctatatatagaggtggagggttgcagagccgttgtaatggcacaccaggctctggcatttacgaaatcgtgggaag 11709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 24033762 - 24033894
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatag---aggtggagggctgcagagccgttgtaat 110  Q
    ||||||||| ||||| ||||||||| |  |||||||| |||| ||||||  |||||| |||| |||||    |||||||||| |||||||||||||||||    
T  24033762 agagagtgaaggttt-agaggaagagatagattctacattggggactgctatgagtcccctagttataatataggtggagggttgcagagccgttgtaat 24033860  T
Q  111 agcacaccttactctgacggttacgaaatcgtgg 144  Q
     |||||| | ||| || |||||||||||||||||    
T  24033861 ggcacacttgactttggcggttacgaaatcgtgg 24033894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 38676933 - 38676893
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttat 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38676933 aacctgaggcgtgacatagtcactgtccttgaggattttat 38676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 17088768 - 17088806
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggatttt 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17088768 aacctgaggcgtgacatagtcactgtccttgaggatttt 17088806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 386
Target Start/End: Complemental strand, 31183816 - 31183750
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggat 386  Q
    |||||||||||||| |||||||  ||||| ||||||||| |||||| |||||||||||||| |||||    
T  31183816 tgaggcgtgacataatcactgttattgagtattttatccacctcattagcgcatatcctccaaggat 31183750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 15604526 - 15604593
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaa 109  Q
    |||||||||||||| | |||||  ||| |||||||||||||||||||  |  ||||||||||||||||    
T  15604526 agattctaccttggaggctgcaaggagcctcctatttatagaggtgggtgaatgcagagccgttgtaa 15604593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 15612877 - 15612944
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaa 109  Q
    |||||||||||||| | |||||  ||| |||||||||||||||||||  |  ||||||||||||||||    
T  15612877 agattctaccttggaggctgcaaggagcctcctatttatagaggtgggtgaatgcagagccgttgtaa 15612944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 4977390 - 4977471
Alignment:
Q  319 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccc 401  Q
    ||||||||||||| || |||| || || ||||||| ||| ||||| || || |||||||||||||||||||||  ||||||||    
T  4977390 ctgaggcgtgacaaagacactatctttaaggattt-atctgcctcgtatgcacatatcctcccaggatacaacgattcttccc 4977471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 22609631 - 22609564
Alignment:
Q  78 tatagaggtggagggctgcagagccgttgtaatag--cacaccttactctgacggttacgaaatcgtg 143  Q
    ||||||||||||||| ||||||| |||||| || |  |||||||  ||||| ||||||||||||||||    
T  22609631 tatagaggtggagggttgcagagtcgttgtgatggtacacacctggctctggcggttacgaaatcgtg 22609564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 212 - 472
Target Start/End: Original strand, 6667613 - 6667871
Alignment:
Q  212 gagaacaataaacttatctgtggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaaaaagtaaaccatta 311  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||| |||| || ||||||||||    
T  6667613 gagaacaataaacttatatgtggtgatttgatgtcggcaaattcgaattaaacaaacacgaaactatgaaagtgataacctaccaagaaataaaccatta 6667712  T
Q  312 cataaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaat 411  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6667713 cataaacctgaggcgtgacatagtcactgttcttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaat 6667812  T
Q  412 cataaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaaccca 472  Q
    |||||||||||||||||||||| ||||||| ||||||  |||||||| |||||||||||||    
T  6667813 cataaccggaggtgacagaacagctcaaatatatctc--agatatcaggagatgtaaccca 6667871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 212 - 472
Target Start/End: Original strand, 6671285 - 6671537
Alignment:
Q  212 gagaacaataaacttatctgtggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaaaaagtaaaccatta 311  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| |||| || ||||||||||    
T  6671285 gagaacaataaacttatctgtggtgatttgatgtcggcaaattcgaattaaacaaacacgaaaccatgaaagtgataacctaccaagaaataaaccatta 6671384  T
Q  312 cataaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaat 411  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||    
T  6671385 cataaacctgaggcgtgacatagtcaccgtccttgaggattttatccgcct------cgcatatcctcccaggatacaacagttcttccccgttatgaat 6671478  T
Q  412 cataaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaaccca 472  Q
    |||||||||||||||||||||| ||||||| ||||||  |||||||| |||||||||||||    
T  6671479 cataaccggaggtgacagaacagctcaaatatatctc--agatatcaggagatgtaaccca 6671537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 316 - 478
Target Start/End: Original strand, 13010531 - 13010692
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||| ||||||||    
T  13010531 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcctaggatataacagttcttctccgttacgaatcata 13010630  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    | |||| ||||||||||||||||||| ||||||| ||||||||  |||||||||||| |||||    
T  13010631 a-cggatgtgacagaacaactcaaatatatctcagagatatcagaagatgtaacccaaaaact 13010692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 17282690 - 17282557
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  17282690 cagagagtgagggtttgagaggaggaaaggttctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca 17282591  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||||||||||||||| ||||||||||    
T  17282590 caccttactctgacggttacgaattcgtgggaag 17282557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 25239694 - 25239827
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||    
T  25239694 cagagagtgagggtttgagagaaagaaagattctaccttggggactgcatttagtcccctatttatagaggtggagggctgcagagccgttgtaatggca 25239793  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||||||||||||||||| ||||||||    
T  25239794 caccttactctgacggttacgaaattgtgggaag 25239827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 13861313 - 13861446
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||    
T  13861313 cagagagtgagggtttgagaagaagaaagattctaccttggggactgcattgagttccctatttatagaggtggagggctgcaaagccgttgtaatggca 13861412  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||| || |||||||||||||||||||    
T  13861413 caccttactctaacagttacgaaatcgtgggaag 13861446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 44643571 - 44643451
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    |||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  44643571 aacctgaggcgtgacatagtcactgtccttcag-attctatccgcctcataagcgcatatcctcctaggatacaacagttcttccccgatatgaatcata 44643473  T
Q  416 accggaggtgacagaacaactc 437  Q
    ||| ||| ||||||||||||||    
T  44643472 accagagatgacagaacaactc 44643451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 316 - 415
Target Start/End: Complemental strand, 895562 - 895463
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||    
T  895562 aacctgagtcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaaagttcttccctaatatgaatcata 895463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 3270546 - 3270679
Alignment:
Q  16 agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||||||| ||| |  ||| |||| ||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  3270546 agagagtgagggtttagagggagagatagatcctaccttggggactgccgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca 3270645  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||  |||||  ||||||||||||||||||||    
T  3270646 cacctggctctggtggttacgaaatcgtgggaag 3270679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 10985912 - 10985780
Alignment:
Q  16 agagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    |||||||||||||||| ||||||||   |||||||||||||| ||||||  |||||| |||||||||||||||||| |||||||||||||||||||| ||    
T  10985912 agagagtgagggtttg-gaggaagaggtagattctaccttgg-gactgccgtgagtcccctatttatagaggtggatggctgcagagccgttgtaatggc 10985815  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  ||||  |||||||||||||||||||||    
T  10985814 acacctggctctcgcggttacgaaatcgtgggaag 10985780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 21332743 - 21332611
Alignment:
Q  16 agagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcac 115  Q
    ||||||||||||||||||    ||| ||||||||||||||  ||||| ||||||| |||||||| |||||||||||||||||||||||||||| | ||||    
T  21332743 agagagtgagggtttgaggaagagatagattctaccttggaaactgctttgagtcccctatttacagaggtggagggctgcagagccgttgtagtggcac 21332644  T
Q  116 accttactctgacggttacgaaatcgtgggaag 148  Q
    ||||  ||||| || |||||||||| |||||||    
T  21332643 acctggctctggcgcttacgaaatcatgggaag 21332611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 12885280 - 12885413
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    |||| |||||||||| ||||||||| |  ||||||||||||| |||||   |||||| |||||||||| |||||||||||||||||||| ||||||| ||    
T  12885280 agagggtgagggttt-agaggaagagatagattctaccttggggactgttgtgagtcccctatttataaaggtggagggctgcagagccattgtaatggc 12885378  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  ||||| |||||||||||||||||||||    
T  12885379 acacctggctctggcggttacgaaatcgtgggaag 12885413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 3268334 - 3268467
Alignment:
Q  16 agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||||||| ||| |  ||| |||||||||||||| |||| |  |||||| ||||||||||||||||||||||||||||||| |||||||  ||    
T  3268334 agagagtgagggtttagagggagagatagattctaccttggagacttccgtgagtcccctatttatagaggtggagggctgcagagccattgtaatgaca 3268433  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||  ||||| |||||||| ||||||||||||    
T  3268434 cacctggctctggcggttacgtaatcgtgggaag 3268467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 20058101 - 20058177
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||    
T  20058101 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcattagcgcgtatccttccacgatacaaca 20058177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 9901871 - 9901770
Alignment:
Q  45 ttctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgg 144  Q
    ||||||||||  ||||||   ||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  9901871 ttctaccttgaggactgctaagagtcccctatatatagaggtggagggttgcagagccgttgtaatggcacacctggctctgacggttacgaaatcgtgg 9901772  T
Q  145 ga 146  Q
    ||    
T  9901771 ga 9901770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 320 - 472
Target Start/End: Original strand, 31767450 - 31767601
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcataacc 418  Q
    |||||||||||| | ||||| ||||| ||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||| | |||||||||  | |    
T  31767450 tgaggcgtgacaaaatcactatccttaaggattt-atccgcctcataagcacatatcctcctaggatacaacatgttcttccctgatatgaatca-catc 31767547  T
Q  419 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaaccca 472  Q
     |||||||||||||||||  ||| |||| |||| ||| || |||||||||||||    
T  31767548 agaggtgacagaacaacttgaatctatcacaaacatagcaggagatgtaaccca 31767601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 320 - 471
Target Start/End: Complemental strand, 43287964 - 43287813
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcataacc 418  Q
    |||||||||||| ||||||||||||| | |  ||||| ||||||||||||||||||| | |||||||||||||  |||||| | | |||||||||  | |    
T  43287964 tgaggcgtgacaaagtcactgtccttaaaggatttattcgcctcataagcgcatatctttccaggatacaacatattcttctcagatatgaatca-catc 43287866  T
Q  419 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaaccc 471  Q
     |||||||||||||| ||  ||| ||||||||||||| || ||||||||||||    
T  43287865 agaggtgacagaacagcttgaatctatctcaaagatagcaggagatgtaaccc 43287813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 49402721 - 49402821
Alignment:
Q  44 attctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtg 143  Q
    ||||||| |||| ||||||  |||||| ||||| ||||||||||||||||||||||||||||||||| |||||||   ||||| ||||||||| ||||||    
T  49402721 attctactttggggactgctatgagtcccctatatatagaggtggagggctgcagagccgttgtaatggcacaccaggctctggcggttacgagatcgtg 49402820  T
Q  144 g 144  Q
    |    
T  49402821 g 49402821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 12217588 - 12217655
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaa 109  Q
    |||||||||||||| |||||   |||||| ||||||||||||||||||||||||||||||||||||||    
T  12217588 agattctaccttggggactgtcgtgagtcccctatttatagaggtggagggctgcagagccgttgtaa 12217655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 18284725 - 18284661
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttat 80  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  18284725 cagagagtgagggttt-agaggaagagagattctaccttggggactgcattgagtcccctatttat 18284661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 26780988 - 26780882
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||| |||||   ||| || |||||  | ||||||||||||||||||||||||||||||  ||||||  ||||||  |||||||||| ||    
T  26780988 agattctaccttggggactgttatgactcccctatacagagaggtggagggctgcagagccgttgtaatgacacaccagactctggtggttacgaaaacg 26780889  T
Q  142 tgggaag 148  Q
    |||||||    
T  26780888 tgggaag 26780882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 10422046 - 10422106
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctccta 75  Q
    ||||||||||||||||  |||||||||| |||||||||||| |||||||||||||| ||||    
T  10422046 cagagagtgagggtttttgaggaagaaatattctaccttggggactgcattgagtccccta 10422106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 8082047 - 8082173
Alignment:
Q  18 agagtgagggtttgagaggaagaa-agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcaca 116  Q
    ||||||||||||| |||| ||||  ||||||||| |||| ||||||   ||||| ||||| |||||||||||||| |||||||||| ||||||| |||||    
T  8082047 agagtgagggttt-agagaaagagtagattctacattggggactgctaagagtcccctatatatagaggtggaggactgcagagccattgtaatggcaca 8082145  T
Q  117 ccttactctgacggttacgaaatcgtgg 144  Q
    |||   ||  || |||||||||||||||    
T  8082146 cctgggtccaacagttacgaaatcgtgg 8082173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 433
Target Start/End: Original strand, 11914061 - 11914176
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacag-ttcttccccgttatgaatcat 414  Q
    ||||| |||||||||  ||||| | ||||| ||||||| ||||| |||||||| |||||||||||||  ||||||||| |||||| ||| ||||||||||    
T  11914061 aacctaaggcgtgacgaagtcattatccttaaggattt-atccgtctcataagtgcatatcctccca-aatacaacagattcttctccggtatgaatcat 11914158  T
Q  415 aaccggaggtgacagaaca 433  Q
     ||  ||||||||||||||    
T  11914159 -actagaggtgacagaaca 11914176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 28891910 - 28892009
Alignment:
Q  16 agagagtgagggtttgagaggaagaa-agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||| ||  |||||||||| |||||||||||||| ||||     ||||| ||||| ||||||||||||| |||||| |||||||||||| |||    
T  28891910 agagagtgaggttt--agaggaagaatagattctaccttggggactcttaagagtcccctatatatagaggtggagagctgcatagccgttgtaatggca 28892007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 34845630 - 34845524
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||| ||||||   ||| | ||| | |||||||||||  |  ||||||| ||||||||| |||||| |   |||||||||||||||||||    
T  34845630 agattctaccttggggactgcgaggagccccctttatatagaggtgggtgaatgcagagtcgttgtaatggcacacatgtgtctgacggttacgaaatcg 34845531  T
Q  142 tgggaag 148  Q
    |||||||    
T  34845530 tgggaag 34845524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 45313209 - 45313279
Alignment:
Q  78 tatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||| ||||| |||| | |||||||||| |||||||   ||||| |||||||||||||||||||||    
T  45313209 tatagaggtagagggttgcaaatccgttgtaatggcacaccaggctctggcggttacgaaatcgtgggaag 45313279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 454
Target Start/End: Original strand, 13250527 - 13250661
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcc-tcccaggatacaaca-gttcttccccgttatgaatcataac 417  Q
    |||||||||||| ||||||| ||||| | ||||| |||| |||||||||||||||||| ||  ||||||||| | ||||||||| | |||||||||  |     
T  13250527 tgaggcgtgacaaagtcactctccttaaagattt-atccacctcataagcgcatatccttcttaggatacaatatgttcttccctgatatgaatca-cat 13250624  T
Q  418 cggaggtgacagaacaactcaaatttatctcaaagat 454  Q
    | | |||||||||||| ||  ||| ||||||||||||    
T  13250625 cagtggtgacagaacagcttgaatctatctcaaagat 13250661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 16396389 - 16396333
Alignment:
Q  92 gctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||||||||| | |||||||| |||||| || ||| |||||| |||||||    
T  16396389 gctgcagagccgttgtagtggcacacctgactctggcgattaggaaatcatgggaag 16396333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 212 - 437
Target Start/End: Original strand, 31209969 - 31210194
Alignment:
Q  212 gagaacaataaacttatctgtggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaaaaagtaaaccatta 311  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  31209969 gagaacaataaacttatctgtggtgatttgatgtcaggaaaatcgaagtaaacaaacacaaaaccatgaaagtgataacctgccaagaagtaaaccatta 31210068  T
Q  312 cataaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaat 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  31210069 cataaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagtgcatatcctcccggggtacaacagttcttccccgttatgaat 31210168  T
Q  412 cataaccggaggtgacagaacaactc 437  Q
    ||||| ||||||||||||||||||||    
T  31210169 cataatcggaggtgacagaacaactc 31210194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 212 - 437
Target Start/End: Original strand, 31206533 - 31206745
Alignment:
Q  212 gagaacaataaacttatctgtggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaaaaagtaaaccatta 311  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||           
T  31206533 gagaacaataaacttatctgtggtgatttgatgtcggcaaaatcgaagtaaacaaacacgaaaccatgaaagtgataacttgccaaaaagtaa------- 31206625  T
Q  312 cataaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaat 411  Q
          ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  31206626 ------cctgaggcgtgacatagtcactgtctttgaggattttatccacctcataagcgcatatcctggcaggatacaacagttcttccccgttatgaat 31206719  T
Q  412 cataaccggaggtgacagaacaactc 437  Q
    |||||| |||||||||||||||||||    
T  31206720 cataactggaggtgacagaacaactc 31206745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 318 - 477
Target Start/End: Complemental strand, 11674118 - 11673960
Alignment:
Q  318 cctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataac 417  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||     
T  11674118 cctgaggtgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttgtt-cccgttatgaatcataat 11674020  T
Q  418 cggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11674019 cggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 11673960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 47295881 - 47295748
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  47295881 cagagagtgagggtttgagaggaagaaagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca 47295782  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||||||||||||||||||||||||||    
T  47295781 caccttactctgacggttacgaaatcgtgggaag 47295748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 319 - 454
Target Start/End: Original strand, 39426452 - 39426587
Alignment:
Q  319 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 418  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  39426452 ctgaggcgtgatatagtcactgtccttgaggattttatccgtctcataagcgaatatcctcccaagataaaacagttcttccctgttatgaatcataacc 39426551  T
Q  419 ggaggtgacagaacaactcaaatttatctcaaagat 454  Q
    |||||||||||||||||||||||||||| |||||||    
T  39426552 ggaggtgacagaacaactcaaatttatcacaaagat 39426587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 21593077 - 21592944
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||    
T  21593077 cagagagtgagggttttagaggaagaaagcttctaccttggggactgcattgagtcccctatttatagaggtggagggctgctgagccgttgtaatggca 21592978  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||||||||||||||| |||||||||||||    
T  21592977 caccttactctgacggttacaaaatcgtgggaag 21592944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 319 - 478
Target Start/End: Original strand, 3850540 - 3850700
Alignment:
Q  319 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaac-agttcttccccgttatgaatcataac 417  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | |||||||| ||||||||| || ||||||||||| |    
T  3850540 ctgaggcgtgacatagtcactgtccttgatgattttatacgcctcataagcgcatatcctcctatgatacaacgagttcttcctcggtatgaatcatacc 3850639  T
Q  418 cggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    | ||||||| |||||||||||||||||||||||||||| ||||| || ||| |||||||||    
T  3850640 cagaggtgatagaacaactcaaatttatctcaaagataacatgatatttaatccagaaact 3850700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 18153131 - 18153261
Alignment:
Q  18 agagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacac 117  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |||||     
T  18153131 agagtgagggtttgagaggaagaaagattctaccttggggaatgcattgagtcccctatttatagaggtggagggctgccgagtcgttgtaatggcacag 18153230  T
Q  118 cttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||||||||||||||||| ||||||||    
T  18153231 cttactctgacggttacgaaatggtgggaag 18153261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 18185624 - 18185757
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| |||||| ||| | ||||||||||||||||||||| |||  |||    
T  18185624 cagagagtgagggtttgagaggaagaaagattctacgctggggactgcattgagtcccctattaataaatgtggagggctgcagagccgttttaacggca 18185723  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||||||||||||||||||| ||||||    
T  18185724 caccttactctgacggttacgaaatcgcgggaag 18185757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 22301149 - 22301224
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaac 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22301149 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaagatacaac 22301224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 30770384 - 30770257
Alignment:
Q  18 agagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcac 115  Q
    ||||||||||||| ||||||||| |  ||||||||||||| ||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  30770384 agagtgagggttt-agaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagtgctgcagagccgttgtaatggcac 30770286  T
Q  116 accttactctgacggttacgaaatcgtgg 144  Q
    ||||  ||||| |||||||||||||||||    
T  30770285 acctggctctggcggttacgaaatcgtgg 30770257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 478
Target Start/End: Original strand, 5434870 - 5435022
Alignment:
Q  327 tgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacag-ttcttccccgttatgaatcataaccggaggtg 425  Q
    ||||||||||  |||| |||| |||||| ||| |||||||||||||||| ||  |||||||||| || ||||||||||||| |||||||||   ||| ||    
T  5434870 tgacatagtcgttgtctttgatgattttttccacctcataagcgcatattctgtcaggatacaagaggttcttccccgttaagaatcataaatagagatg 5434969  T
Q  426 acagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    ||||||||||| |||||||||||||| ||||||  |||||||||||| |||||    
T  5434970 acagaacaactaaaatttatctcaaaaatatcagaagatgtaacccataaact 5435022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 29164848 - 29164982
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |  ||||||||||||| ||||||  |||||| |||||||||||||||||| ||||||||||||||||||||      
T  29164848 cagagagtgagggttt-agaggaagagatagattctaccttggggactgctatgagtcccctatttatagaggtggacggctgcagagccgttgtaatga 29164946  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||| |||||    |||||||||||||||||||    
T  29164947 cacacctgactctagaagttacgaaatcgtgggaag 29164982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 20093566 - 20093669
Alignment:
Q  45 ttctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgg 144  Q
    ||||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | ||  |||||||||||||||||    
T  20093566 ttctaccttggggactgccgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggccctagcggttacgaaatcgtgg 20093665  T
Q  145 gaag 148  Q
    ||||    
T  20093666 gaag 20093669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 21802450 - 21802583
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||||||||| ||||||  |||||| ||||||||||||||| ||||||| ||||||||||||||| ||    
T  21802450 agagagtgagggttt-agaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggttgagggctacagagccgttgtaatggc 21802548  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  |||||  |||||||||||||| |||||    
T  21802549 acacctggctctggtggttacgaaatcgtaggaag 21802583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 233 - 401
Target Start/End: Complemental strand, 13815940 - 13815772
Alignment:
Q  233 ggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagt-gataaccttccaaaaagtaaaccattacataaacctgaggcgtgaca 331  Q
    |||||||||| |||| | |||| |||||||| || ||  ||||||| ||||  |||||||| ||||| ||||| |||||| |||| | ||||||||||||    
T  13815940 ggtgatttgacgtcgacgaaatcgaagtaaagaatcagaaaaccataaaaggagataacctgccaaacagtaatccattatataa-catgaggcgtgaca 13815842  T
Q  332 tagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccc 401  Q
     ||||||||||||| ||||||| || ||||||||||||||||||| ||||||||||||||| |||||||||    
T  13815841 aagtcactgtccttaaggattt-attcgcctcataagcgcatatcttcccaggatacaacatgttcttccc 13815772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 15569685 - 15569565
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcat 414  Q
    |||||||||||||||| |||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||| ||||||| | | ||||||||||    
T  15569685 aacctgaggcgtgacaaagtcactgtccttagggattt-atccgcctcataagcacatatcctcccaggatacaacaggttcttctctgatatgaatcat 15569587  T
Q  415 aaccggaggtgacagaacaactc 437  Q
     | | ||||||||||||||||||    
T  15569586 -atcagaggtgacagaacaactc 15569565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 321 - 471
Target Start/End: Original strand, 32352432 - 32352581
Alignment:
Q  321 gaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcataaccg 419  Q
    ||||||||||| ||||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||  |||||| | | |||||||||  | |     
T  32352432 gaggcgtgacaaagtcactgtccttaaggattt-attcgcctcataagcgcatatcctcccaggacacaacatattcttctcagatatgaatca-catca 32352529  T
Q  420 gaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaaccc 471  Q
    |||||||||||||| || |||| |||||| |||||| || ||||||||||||    
T  32352530 gaggtgacagaacagcttaaatctatctctaagatagcaggagatgtaaccc 32352581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 22703896 - 22704000
Alignment:
Q  16 agagagtgagggtttgagagga--agaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||  ||| |||||||||||||| ||||||  |||||| | ||||||||||||||||||||||||||||||||||||| ||    
T  22703896 agagagtgagggttt-agaggacgagatagattctaccttggggactgctgtgagtcccatatttatagaggtggagggctgcagagccgttgtaatggc 22703994  T
Q  114 acacct 119  Q
    ||||||    
T  22703995 acacct 22704000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 9549168 - 9549035
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  |||| |||||||| |||| | ||||||| ||| |||||| ||||||||||||||||||||||||||   ||    
T  9549168 agagagtgagggttt-agaggaagagatagattttaccttggggactactttgagtcccctttttataaaggtggagggctgcagagccgttgtagaggc 9549070  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  ||||  |||||||||||||||||||||    
T  9549069 acacctggctctagcggttacgaaatcgtgggaag 9549035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 7595406 - 7595482
Alignment:
Q  72 cctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||  | |||   |||||||||||||||||||    
T  7595406 cctatttatagaggtggagggctgcaaagccgttgtaatagcacacctggcgctggatgttacgaaatcgtgggaag 7595482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 2250193 - 2250059
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    ||||||||||| |||| ||||||||| |  |||||||| |||| |  |||  |||||| ||||| ||||||||||||||| ||||||||||||||||| |    
T  2250193 cagagagtgagagttttagaggaagagatagattctacattggggtttgctatgagtcccctatatatagaggtggagggttgcagagccgttgtaatgg 2250094  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaa 147  Q
    ||||||   || || ||||||| ||||||||||||    
T  2250093 cacaccaggctttggcggttacaaaatcgtgggaa 2250059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 22705649 - 22705732
Alignment:
Q  65 tgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||| | |||||||||||||||||| |||||||||| ||||||| ||||||||  ||||| ||||||||||||| |||||||    
T  22705649 tgagtcccgtatttatagaggtggaggactgcagagccattgtaatggcacacctggctctggcggttacgaaatcatgggaag 22705732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 443
Target Start/End: Original strand, 2609600 - 2609726
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcat 414  Q
    |||||||||||||||  ||||||| ||||| || |||| ||| | ||||||||||||||||||| |||||||||||| ||||||| | | ||||||||||    
T  2609600 aacctgaggcgtgacgaagtcactatccttaagtattt-atctgtctcataagcgcatatcctcgcaggatacaacatgttcttctctgatatgaatcat 2609698  T
Q  415 aaccggaggtgacagaacaactcaaattt 443  Q
     | | || ||||||||||||||| |||||    
T  2609699 -atcagatgtgacagaacaactcgaattt 2609726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 393
Target Start/End: Complemental strand, 15170131 - 15169978
Alignment:
Q  238 tttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaa-gtgataaccttccaaaaagtaaaccattacataaacctgaggcgtgacatagtc 336  Q
    ||||| |||||||||||| |||| ||||||||||||||||| ||| |  ||||||| | ||| ||||||| |||| |||| |||||| |||||   ||||    
T  15170131 tttgaagtcggcaaaattaaagtgaacaaacacgaaaccataaaatgcaataacctgcaaaacagtaaac-attaaataa-cctgagacgtgatgaagtc 15170034  T
Q  337 actgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacag 393  Q
    ||||||||| |  |||| ||| ||||||||| ||||||||||| |||||||||||||    
T  15170033 actgtccttaaaaattt-atcagcctcataaacgcatatcctcacaggatacaacag 15169978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 28794227 - 28794094
Alignment:
Q  15 cagagagtgagggtttgagaggaagaa-agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    |||||| ||||||||| ||||| |||| |||||||||||||| |||||    ||||| ||||| |||| |||||   ||||||| |||||||||||| ||    
T  28794227 cagagaatgagggttt-agagggagaatagattctaccttggggactgttaagagtcccctatatataaaggtgagtggctgcatagccgttgtaatggc 28794129  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||| |   ||||||||||||||||||||||||||    
T  28794128 acacgtgtgtctgacggttacgaaatcgtgggaag 28794094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 30765114 - 30765047
Alignment:
Q  81 agaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||||||||||||| |||||| | ||||||||   || ||||| |||||||||||||||||    
T  30765114 agaggtggagggctgcagagctgttgtagtggcacacctaggtccgacgggtacgaaatcgtgggaag 30765047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 38612620 - 38612690
Alignment:
Q  78 tatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||||||||  |||||||||||||||||| | |||||   ||||| ||||||| |||||||||||||    
T  38612620 tatagaggtggagatctgcagagccgttgtaatggtacaccaggctctggcggttacaaaatcgtgggaag 38612690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 1e-79; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 319 - 477
Target Start/End: Original strand, 19697846 - 19698004
Alignment:
Q  319 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 418  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19697846 ctgaggcgtgacatagtcattgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataatc 19697945  T
Q  419 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 477  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19697946 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 19698004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 29095214 - 29095084
Alignment:
Q  18 agagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacac 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  29095214 agagtgagggtttgagaggaagaaagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacac 29095115  T
Q  118 cttactctgacggttacgaaatcgtgggaag 148  Q
    || ||||||||||||||||||||||||||||    
T  29095114 ctaactctgacggttacgaaatcgtgggaag 29095084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 316 - 407
Target Start/End: Original strand, 6591847 - 6591938
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttat 407  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  6591847 aacctgaggcgtgacgtagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatgcaacagttcttctccgttat 6591938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 244 - 436
Target Start/End: Original strand, 3835586 - 3835777
Alignment:
Q  244 gtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaaaaagtaaaccattacataaacctgaggcgtgacatagtcactgtcc 343  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||| ||||||| ||||| |||| |   |||| ||||    
T  3835586 gtcggcaaaatcgaagtaaacaaacacgaaaccatgagagtgataacctgcaaaacagtaaaccattgcataaacatgaggtgtgataagatcaccgtcc 3835685  T
Q  344 ttgaggattttatccgcctcataagcgcatatcctcccaggatacaac-agttcttccccgttatgaatcataaccggaggtgacagaacaact 436  Q
    || |||| ||||| | |||||||||||||||||||| ||||||||||| | |||||| | | ||| |||||| | | |||||||||||||||||    
T  3835686 ttaagga-tttattcacctcataagcgcatatcctctcaggatacaacaaattcttctctgatataaatcat-atcagaggtgacagaacaact 3835777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 233 - 401
Target Start/End: Original strand, 24044848 - 24045016
Alignment:
Q  233 ggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagt-gataaccttccaaaaagtaaaccattacataaacctgaggcgtgaca 331  Q
    ||||||||||  ||| | |||| ||||||||||| ||  ||||||||||||  |||||||| ||||| ||||| |||||| |||| | ||||||||||||    
T  24044848 ggtgatttgacctcgacgaaatcgaagtaaacaatcagaaaaccatgaaaggagataacctgccaaacagtaatccattatataa-catgaggcgtgaca 24044946  T
Q  332 tagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccc 401  Q
     ||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||    
T  24044947 aagtcactgtccttaaggattt-attcgcctcataagcgcatatcctcccaggatacaacatgttcttccc 24045016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 7968672 - 7968565
Alignment:
Q  37 aagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacga 136  Q
    |||| ||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||| |||||| |||||||||    
T  7968672 aagatagattctgccttggggactgcattgagtcccctatatatagaggtggagggctgcagagctgttgtaatggcacacctgactctggcggttacga 7968573  T
Q  137 aatcgtgg 144  Q
    ||| ||||    
T  7968572 aattgtgg 7968565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 18014656 - 18014524
Alignment:
Q  17 gagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||||||  ||||||||| |  ||||||||||||| ||||||  |||||| ||||  ||||||||||||||||||||||||||||||||| |||    
T  18014656 gagagtgagggtta-agaggaagagattgattctaccttggggactgctatgagtcccctacatatagaggtggagggctgcagagccgttgtaatggca 18014558  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||  ||||| |||||||||||||||||||||    
T  18014557 cacctagctctggcggttacgaaatcgtgggaag 18014524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 44 - 148
Target Start/End: Complemental strand, 19860222 - 19860118
Alignment:
Q  44 attctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtg 143  Q
    |||||||||||| ||||||  |||||| ||||||||||||||||||||||||| ||||||||||||| | ||||||  ||||| ||||||||||||||||    
T  19860222 attctaccttggggactgctgtgagtcccctatttatagaggtggagggctgcggagccgttgtaatgggacacctggctctggcggttacgaaatcgtg 19860123  T
Q  144 ggaag 148  Q
    |||||    
T  19860122 ggaag 19860118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 4409196 - 4409329
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||||||||| ||||||||||| ||  ||||||||||||||||||||||||| |||||||  ||| ||    
T  4409196 agagagtgagggttt-agaggaagagatagattctaccttggggactgcattgaatcctctatttatagaggtggagggctgcaaagccgttacaatggc 4409294  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||| ||||| ||||||| |||||||| ||||    
T  4409295 acaccttgctctggcggttacaaaatcgtgagaag 4409329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 8306064 - 8306170
Alignment:
Q  16 agagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcac 115  Q
    ||||||||||||||| |||||||||  ||||||||||||| ||||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  8306064 agagagtgagggttt-agaggaaga--gattctaccttggggactgctgtgagtcccctatttatagaggtggagggttgcagagccgttgtaatggcac 8306160  T
Q  116 accttactct 125  Q
    |||| |||||    
T  8306161 acctgactct 8306170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 233 - 401
Target Start/End: Original strand, 24041545 - 24041713
Alignment:
Q  233 ggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagt-gataaccttccaaaaagtaaaccattacataaacctgaggcgtgaca 331  Q
    |||||||||| |||| | |||| |||||||||||  |||||||||||||||  |||||||| ||||| ||||| |||||| |||| | | ||||||||||    
T  24041545 ggtgatttgacgtcgacgaaatcgaagtaaacaattacgaaaccatgaaaggagataacctgccaaacagtaatccattatataa-cataaggcgtgaca 24041643  T
Q  332 tagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccc 401  Q
     |||||||||| || || |||| || ||||||||||||||||||||||| ||||||||||| |||||||||    
T  24041644 aagtcactgtctttaagaattt-attcgcctcataagcgcatatcctcctaggatacaacatgttcttccc 24041713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 12738494 - 12738628
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    ||||||||| |||||| ||||||||| |  |||||||||| || ||||||  |||||| ||||||||||||||||||||| ||||||||||||||||| |    
T  12738494 cagagagtgggggttt-agaggaagagatagattctacctaggggactgctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatgg 12738592  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||| ||  || ||||| ||||||||||||||||||    
T  12738593 cacatctggctatgacgattacgaaatcgtgggaag 12738628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 44 - 148
Target Start/End: Original strand, 18736029 - 18736133
Alignment:
Q  44 attctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtg 143  Q
    |||||| ||||| ||||||  |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||  ||||| |||||||||||| |||    
T  18736029 attctagcttggggactgctatgagtcccctatttatagaggtggagggctgctgagccgttgtaatggcacacctggctctggcggttacgaaattgtg 18736128  T
Q  144 ggaag 148  Q
    |||||    
T  18736129 ggaag 18736133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 15 - 144
Target Start/End: Original strand, 23574393 - 23574523
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |  ||||||||||||  |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| |    
T  23574393 cagagagtgagggttt-agaggaagagatagattctaccttgtggactgctttgagtcccctatttatagaggtagagggctgcagagccgttgtaatgg 23574491  T
Q  113 cacaccttactctgacggttacgaaatcgtgg 144  Q
    ||||| |  ||||| | |||||||| ||||||    
T  23574492 cacacttggctctggctgttacgaagtcgtgg 23574523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 18043340 - 18043472
Alignment:
Q  16 agagagtgagggtttgagaggaagaaaga--ttctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| | |  ||||||||||| ||||||||| |||| |||||||||||||||||||||||||| ||||||||||||  |    
T  18043340 agagagtgagggttt-agaggaagagataaattctaccttggggactgcatttagtcccctatttatagaggtggagggctgcaaagccgttgtaatgac 18043438  T
Q  114 acaccttactctgacggttacgaaatcgtgggaa 147  Q
    || | | |||||| ||| ||||||||| ||||||    
T  18043439 acgcatgactctggcgggtacgaaatcatgggaa 18043472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 18258795 - 18258661
Alignment:
Q  15 cagagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    |||||||||||||||| ||||  || | |||||||||||||| |||||   |||||| ||||||||||||||| |||||||| |||||||||||| | ||    
T  18258795 cagagagtgagggtttagagaaaaatatagattctaccttggagactgttgtgagtcccctatttatagaggtagagggctgtagagccgttgtagtggc 18258696  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  |||||| ||||||||||| ||||||||    
T  18258695 acacctggctctgatggttacgaaattgtgggaag 18258661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 14910604 - 14910739
Alignment:
Q  15 cagagagtgagggtttgagaggaaga--aaga-ttctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaata 111  Q
    |||||||||||||||| |||||||||   ||| ||||||||||| ||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||     
T  14910604 cagagagtgagggttt-agaggaagagctagatttctaccttggggactgcagtgagtcccctatatatagaggtggagggctgcaaagccgttgtaatg 14910702  T
Q  112 gcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||| |  ||||| | |||||||||| ||||||||    
T  14910703 gcacacatcgctctggcagttacgaaattgtgggaag 14910739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 43 - 148
Target Start/End: Complemental strand, 15349800 - 15349695
Alignment:
Q  43 gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgt 142  Q
    |||||||| |||| ||||||   ||||| ||||| |||||||||||||||||||||||||||||| |||||||||||   |||| |||||||||||||||    
T  15349800 gattctacgttggggactgctaagagtcccctatatatagaggtggagggctgcagagccgttgtgatagcacacctgggtctggcggttacgaaatcgt 15349701  T
Q  143 gggaag 148  Q
    ||||||    
T  15349700 gggaag 15349695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 29482590 - 29482724
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    ||||||||| |||||| ||||||||| |  ||||||||||||| |||| |  |||||| |||||||||||||||||||||||| |||| ||||||||| |    
T  29482590 cagagagtgggggttt-agaggaagagatagattctaccttggggactactatgagtcccctatttatagaggtggagggctgtagagtcgttgtaatgg 29482688  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||   |||  |||||||||||||||||||||    
T  29482689 cacacctggttctagcggttacgaaatcgtgggaag 29482724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 403 - 478
Target Start/End: Complemental strand, 15518073 - 15517998
Alignment:
Q  403 gttatgaatcataaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||    
T  15518073 gttataaatcataaccggaggtgacagaacaactcaactttatcttaaagatatgaggagatgtaacccagaaact 15517998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 15119891 - 15119787
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||| || ||  ||||||| ||||||||||||||||||| | |||||||||  |||||| ||||||||  ||||| ||||||| ||||||    
T  15119891 agattctaccttggggattg--ttgagtcccctatttatagaggtggagagttgcagagccagtgtaatggcacacctggctctggcggttacaaaatcg 15119794  T
Q  142 tgggaag 148  Q
    |||||||    
T  15119793 tgggaag 15119787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 24438760 - 24438628
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  |||| |||||||| ||||||  |||||| ||||||||||||||| ||||  ||||||| |||||||||  |    
T  24438760 agagagtgagggttt-agaggaagagatagattataccttgg-gactgctgtgagtcccctatttatagaggtagaggattgcagagtcgttgtaatgac 24438663  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  ||||  |||||||||||||||||||||    
T  24438662 acacctggctcttgcggttacgaaatcgtgggaag 24438628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 18728948 - 18729054
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||  |||||   |||||| ||||||||||||||||||||||||||||| | ||||||| | ||||||  ||||| ||| ||| ||||||    
T  18728948 agattctaccttgaggactgttatgagtcccctatttatagaggtggagggctgcagagacattgtaatggaacacctggctctggcgggtacaaaatcg 18729047  T
Q  142 tgggaag 148  Q
    |||||||    
T  18729048 tgggaag 18729054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 148
Target Start/End: Complemental strand, 15319150 - 15319045
Alignment:
Q  43 gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgt 142  Q
    ||||||||||||| ||||||   ||||  ||||| ||||||||||||||||||||||| |||||| || | ||||||   |||| |||||||||||||||    
T  15319150 gattctaccttggggactgctaagagttccctatatatagaggtggagggctgcagagtcgttgtgatggtacacctaggtctggcggttacgaaatcgt 15319051  T
Q  143 gggaag 148  Q
    ||||||    
T  15319050 gggaag 15319045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 15518127 - 15518074
Alignment:
Q  325 cgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcct 378  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  15518127 cgtgacatagtcactttccttgaggattatatccgcctcataagcgcatatcct 15518074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 17757140 - 17757084
Alignment:
Q  92 gctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  17757140 gctgccgagccgttgtaatggcacaccttactctgacggttacaaaatcgtgggaag 17757084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 3876375 - 3876451
Alignment:
Q  72 cctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| |||||||||||||||||||||||||||||| |   ||||||| | |||| ||||||||||||||| |||||    
T  3876375 cctatatatagaggtggagggctgcagagccgttgtgaagacacacctaagtctggcggttacgaaatcgtaggaag 3876451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 19973787 - 19973730
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcata 374  Q
    |||||||||||||||| ||||||||||||| | || |||||||||||||||||||||||    
T  19973787 aacctgaggcgtgacaaagtcactgtccttaaaga-tttatccgcctcataagcgcata 19973730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 23524128 - 23524193
Alignment:
Q  79 atagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgg 144  Q
    ||||| |||||||||||||||||| ||||||| ||||||||  ||||| |||||| ||||||||||    
T  23524128 atagacgtggagggctgcagagccattgtaatggcacacctggctctggcggttaagaaatcgtgg 23524193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 14579716 - 14579662
Alignment:
Q  338 ctgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacag 393  Q
    |||||||| ||||||| |||||||||||||||| |||||||| |||||||||||||    
T  14579716 ctgtccttaaggattt-atccgcctcataagcgaatatcctctcaggatacaacag 14579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 376
Target Start/End: Original strand, 2936125 - 2936205
Alignment:
Q  294 ccaaaaagtaaaccattacataaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatc 376  Q
    ||||| |||||||| ||| |||| | ||||| |||||  ||||||||||||| ||||||| ||||||||||||||||||||||    
T  2936125 ccaaatagtaaaccgttatataa-catgaggtgtgacgaagtcactgtccttaaggattt-atccgcctcataagcgcatatc 2936205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 148
Target Start/End: Complemental strand, 15369795 - 15369691
Alignment:
Q  44 attctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtg 143  Q
    |||||||||||| ||||||   |||||  |||| |||||||||||||||||| |||| |||| | || | ||||||   |||| |||||||||||| ||     
T  15369795 attctaccttggggactgctaagagtcctctatatatagaggtggagggctgtagagtcgttatgatggtacacctaggtctggcggttacgaaattgta 15369696  T
Q  144 ggaag 148  Q
    |||||    
T  15369695 ggaag 15369691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 19885769 - 19885837
Alignment:
Q  42 agattctacc-ttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaa 109  Q
    |||||||||| |||| |||||||  ||||| ||| | |||||||| ||| |||||||||||||||||||    
T  19885769 agattctacccttggggactgcaaagagtcccctttatatagaggcggatggctgcagagccgttgtaa 19885837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 3e-77; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 316 - 478
Target Start/End: Complemental strand, 2590620 - 2590458
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2590620 aacctgaggcgtgacatagtcactgtccttgaggattttattcgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 2590521  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  2590520 accggaggtgacagaacaactcaaatttatctcatagatatcaggagatataacccagaaact 2590458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 320 - 477
Target Start/End: Original strand, 18739113 - 18739270
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataaccg 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  18739113 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccacaatacaacggttcttccccgttatgaatcataatcg 18739212  T
Q  420 gaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 477  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  18739213 gaggtgacagaacagctcgaatttatctcaaatatatcatgagatgtaacccagaaac 18739270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 316 - 475
Target Start/End: Complemental strand, 21189521 - 21189362
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  21189521 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctccccggatacaacagttattccccgttatgaatcata 21189422  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaa 475  Q
    || |||||||||||||||||||||| | |||||||||||| |  ||||||||||||||||    
T  21189421 actggaggtgacagaacaactcaaaataatctcaaagataaccggagatgtaacccagaa 21189362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 316 - 477
Target Start/End: Original strand, 14433597 - 14433759
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcat 414  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||  || ||| ||||| ||||||||| ||||||||||||||||||||||    
T  14433597 aacctgaggcgtgacatagtcactgtccttgtggattttatccgcctcataagtacacatcttcccaagatacaacatgttcttccccgttatgaatcat 14433696  T
Q  415 aaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 477  Q
    ||||  ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||    
T  14433697 aaccaaaggtgacagaataactcaaatttatctcaaagatatcaggagatgtaacctagaaac 14433759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 315 - 478
Target Start/End: Original strand, 35969274 - 35969433
Alignment:
Q  315 aaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcat 414  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    || | || ||||||||||||||||||||||||||    
T  35969274 aaacctgaggcgtgacatagtcactgtccttgaagattttatccgcctcaaaagcgcatatca---catgtta-aacagttcttccccgttatgaatcat 35969369  T
Q  415 aaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    ||| |||||| |||||||||||||||||||||||||||||| |   |||||||||| |||||||    
T  35969370 aacaggaggtaacagaacaactcaaatttatctcaaagataaccgaagatgtaacctagaaact 35969433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 336 - 467
Target Start/End: Complemental strand, 1043244 - 1043114
Alignment:
Q  336 cactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataaccggaggtgacagaacaac 435  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| ||| ||||||||||||      
T  1043244 cactgtccttgaggattttatccgtctcataggcgcatatcctcccaggatacaaccgttctt-cccgttatgaatcataatcgggggtgacagaacagg 1043146  T
Q  436 tcaaatttatctcaaagatatcatgagatgta 467  Q
    ||||||| |||||||||||| || ||||||||    
T  1043145 tcaaattcatctcaaagataacaggagatgta 1043114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 41266396 - 41266262
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  41266396 agagagtgagggttttagaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggc 41266297  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  ||||| ||||||||| |||||| ||||    
T  41266296 acacctggctctggcggttacgatatcgtgagaag 41266262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 42534295 - 42534189
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||| ||||||||||||||    
T  42534295 agattctaccttggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacatctggctctggcggttacgaaatcg 42534196  T
Q  142 tgggaag 148  Q
    |||||||    
T  42534195 tgggaag 42534189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 27347170 - 27347302
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||| |||||  |||||||| |||||||||||||| ||||||||||| || ||||| |||||| |||||||||| || |||||||||||| |||    
T  27347170 cagagagtgatggtttt-gaggaagagagattctaccttggggactgcattgaatcccctatgtatagacgtggagggctacaaagccgttgtaatggca 27347268  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| || ||||||||||||||||| |||||||    
T  27347269 cacctaacactgacggttacgaaatcatgggaag 27347302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 23929796 - 23929930
Alignment:
Q  15 cagagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| |||||||||   ||||| |||||||| ||||||| |||||| ||||| || |||||||||||||||||||||||||||||| |    
T  23929796 cagagagtgagggttt-agaggaagagttagattttaccttggggactgcagtgagtcccctatataaagaggtggagggctgcagagccgttgtaatgg 23929894  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||  ||||| |||||||| ||||||||||||    
T  23929895 cacacctggctctggcggttacggaatcgtgggaag 23929930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 237 - 414
Target Start/End: Complemental strand, 8424661 - 8424484
Alignment:
Q  237 atttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaaaaagtaaaccattacataaacctgaggcgtgacatagtc 336  Q
    ||||||| ||||||||||  |||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||| |   ||    
T  8424661 atttgatctcggcaaaatcaaagtaaacaaacactaaaccatgaaagtgataacctgcaaaacagtaaaccattacataaacctgagacgtgataggatc 8424562  T
Q  337 actgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcat 414  Q
    |||||| || |||| || ||| ||||||||||| ||| | |||  ||||||||||| ||||||| | | ||||||||||    
T  8424561 actgtcgttaagga-ttcatctgcctcataagcacattttctcttaggatacaacatgttcttctctgatatgaatcat 8424484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 1043579 - 1043480
Alignment:
Q  215 aacaataaacttatctgtggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaa-aaagtaaaccattaca 313  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||| |||| | ||||||||||||||    
T  1043579 aacaataaacttatctgtggggatttgatgtcagcaaaattgaagtaaacaaacacggaaccgtgaaggtgataacctgccaagagagtaaaccattaca 1043480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 23756018 - 23755885
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||||||||| |||||   |||||| |||||||||||||||||| ||||| |||||||||||||| ||    
T  23756018 agagagtgagggttt-agaggaagagatagattctaccttggggactgttgtgagtcccctatttatagaggtggaaggctgtagagccgttgtaatggc 23755920  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  ||||  |||||||||||||||||||||    
T  23755919 acacctggctctagcggttacgaaatcgtgggaag 23755885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 25134106 - 25134004
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||| | ||||||  |||||| ||||||||||||||||||||||||||||||||||||| | ||||||||  ||||| ||||||||||||||    
T  25134106 agattctaccttagggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtagtggcacacctggctctggcggttacgaaatcg 25134007  T
Q  142 tgg 144  Q
    |||    
T  25134006 tgg 25134004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 3770260 - 3770389
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| | ||||||| |  ||||||||||||| |||||   ||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  3770260 agagagtgagggtttaa-aggaagagatagattctaccttggggactgttgtgaatcccctatttatagaggtggagggctgcagagccgttgtaatggc 3770358  T
Q  114 acaccttactctgacggttacgaaatcgtgg 144  Q
    ||||||  ||||| ||||||| |||||||||    
T  3770359 acacctggctctggcggttacaaaatcgtgg 3770389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 29568315 - 29568448
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||| ||||| |  |||  |||||| || |||||||||||||||||||| ||||||||||||||| |     
T  29568315 agagagtgagggttt-agaggaagacatagattctaacttggcggttgctatgagtccccaatttatagaggtggagggctacagagccgttgtaatggt 29568413  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  ||||| |||||||||||||||||||||    
T  29568414 acacctggctctggcggttacgaaatcgtgggaag 29568448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 3105203 - 3105337
Alignment:
Q  15 cagagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||| ||| |||||||||   |||||||||||||| ||||||  |||||| | ||||||||||||||||||  || ||||||||||||||      
T  3105203 cagagagtgaggtttt-agaggaagagttagattctaccttggggactgctatgagtcccatatttatagaggtggaggattgtagagccgttgtaatga 3105301  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||| ||||| | ||||| ||||||||||||||    
T  3105302 cacacctaactctcatggttatgaaatcgtgggaag 3105337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 383
Target Start/End: Original strand, 10941364 - 10941489
Alignment:
Q  256 gaagtaaacaaacacgaaaccatgaaagt-gataaccttccaaaaagtaaaccattacataaacctgaggcgtgacatagtcactgtccttgaggatttt 354  Q
    ||||||||||| || |||||||||||||  |||||  | ||||| ||||| |||||| |||| | |||||||||||| ||||||||||||| |||||||     
T  10941364 gaagtaaacaatcaggaaaccatgaaaggagataatttgccaaacagtaatccattatataa-catgaggcgtgaca-agtcactgtccttaaggattt- 10941460  T
Q  355 atccgcctcataagcgcatatcctcccag 383  Q
    || ||||||||||||||||||||||||||    
T  10941461 attcgcctcataagcgcatatcctcccag 10941489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 383
Target Start/End: Original strand, 10947233 - 10947358
Alignment:
Q  256 gaagtaaacaaacacgaaaccatgaaagt-gataaccttccaaaaagtaaaccattacataaacctgaggcgtgacatagtcactgtccttgaggatttt 354  Q
    ||||||||||| || |||||||||||||  |||||  | ||||| ||||| |||||| |||| | |||||||||||| ||||||||||||| |||||||     
T  10947233 gaagtaaacaatcaggaaaccatgaaaggagataatttgccaaacagtaatccattatataa-catgaggcgtgaca-agtcactgtccttaaggattt- 10947329  T
Q  355 atccgcctcataagcgcatatcctcccag 383  Q
    || ||||||||||||||||||||||||||    
T  10947330 attcgcctcataagcgcatatcctcccag 10947358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 26155131 - 26155049
Alignment:
Q  66 gagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||| ||||||||  || ||  ||||||||||||||||||||    
T  26155131 gagtcccctatttatagaggtggagggctgcatagccgttataatggcacacctggctatggtggttacgaaatcgtgggaag 26155049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 401
Target Start/End: Original strand, 27083092 - 27083173
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccc 401  Q
    |||||| ||||| |||| |||||||  ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  27083092 tgaggcatgacaaagtcgctgtcctgaaggattt-atccgcctcacaagcgcatatcctcccaggatacaacaggttcttccc 27083173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 19092753 - 19092854
Alignment:
Q  47 ctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtggga 146  Q
    ||||||||| ||||||  |||||| ||||| ||||||||||| |||||||||||||||||||||  ||||||  |||||  ||||| |||| | ||||||    
T  19092753 ctaccttggggactgctatgagtcccctatatatagaggtggggggctgcagagccgttgtaatgacacaccagactctcgcggtttcgaacttgtggga 19092852  T
Q  147 ag 148  Q
    ||    
T  19092853 ag 19092854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 26159233 - 26159154
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggct 94  Q
    ||||||||||||||| ||||||||| |  |||||||||||||  ||||| ||||||| |||||||||||||||||||||||    
T  26159233 agagagtgagggttt-agaggaagagatagattctaccttgggaactgctttgagtcccctatttatagaggtggagggct 26159154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 10938003 - 10938112
Alignment:
Q  256 gaagtaaacaaacacgaaaccatgaaagt-gataaccttccaaaaagtaaaccattacataaacctgaggcgtgacatagtcactgtccttgaggatttt 354  Q
    ||||||||||| || |||| ||||||||  || ||||| ||||  ||||| |||||| |||| | |||||||||||| ||||||||||||| |||| |||    
T  10938003 gaagtaaacaatcaggaaatcatgaaaggagacaacctgccaaccagtaatccattatataa-catgaggcgtgaca-agtcactgtccttaagga-ttt 10938099  T
Q  355 atccgcctcataa 367  Q
    || ||||||||||    
T  10938100 attcgcctcataa 10938112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 318 - 477
Target Start/End: Complemental strand, 82739 - 82580
Alignment:
Q  318 cctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataac 417  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  82739 cctgaggcgtgacatagtcactatccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttataaatcatagc 82640  T
Q  418 cggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 477  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  82639 cggatgtgacagaacatctcaaatttatctcaaagatatcatgagatgcaacccagaaac 82580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 4e-70; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 316 - 478
Target Start/End: Original strand, 24981160 - 24981322
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24981160 aacctgaggcgtgacatagtcagcgtccttgaggattttatccgcctcataagcacatatcctcccaggatacaacagttcttccccgttatgaatcata 24981259  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  24981260 accggagatgatagaacaactcaaatttatctcaaagatatcaggagatgtaacacagaaact 24981322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 316 - 478
Target Start/End: Original strand, 12141650 - 12141812
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  12141650 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacaattattccccgttatgaatcata 12141749  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    ||  |||||||||||||||||||||||||| ||||||||||||  |||| ||||||| |||||    
T  12141750 actagaggtgacagaacaactcaaatttatatcaaagatatcagaagatataacccaaaaact 12141812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 343 - 478
Target Start/End: Complemental strand, 1953780 - 1953645
Alignment:
Q  343 cttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataaccggaggtgacagaacaactcaaatt 442  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1953780 cttgaggattttatctgcctcataagcgaatatcctcccaggatacaacagttcttccctgttatgaatcataacgggaggtgacagaacaactcaaatt 1953681  T
Q  443 tatctcaaagatatcatgagatgtaacccagaaact 478  Q
    |||| ||||||| ||| |||||||||||||||||||    
T  1953680 tatcacaaagatgtcaggagatgtaacccagaaact 1953645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 24974086 - 24973953
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| |||    
T  24974086 cagagagtgagggttttagaggaagagagattctaccttggtgactgcattgagtcccctatttatagagttagagggctgcagagccgttgtaatggca 24973987  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| ||||||||||||||||||||||||||||    
T  24973986 cacctaactctgacggttacgaaatcgtgggaag 24973953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 317 - 478
Target Start/End: Complemental strand, 47580515 - 47580352
Alignment:
Q  317 acctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcc--caggatacaacagttcttccccgttatgaatcat 414  Q
    ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||    
T  47580515 acctgaggcgtgacatagtcaatgtccttgaagattttatctgcctcataagcgaatatcctccaccaggatacaacaggtcttccccgttatgaatcat 47580416  T
Q  415 aaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    ||||  || |||||||| |||||||||||||| ||||||| ||| |||||||||||||||||||    
T  47580415 aaccaaagatgacagaagaactcaaatttatcacaaagatgtcaggagatgtaacccagaaact 47580352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 21817938 - 21817805
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||| |||||||||||||||| |||    
T  21817938 cagagagtgagggttttagaggaagaaagattctaccttggggactgcattgagtcccctatttataaaggtggatggccgcagagccgttgtaatggca 21817839  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| ||||||||||||||||||||||||||||    
T  21817838 cacctaactctgacggttacgaaatcgtgggaag 21817805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 22186186 - 22186053
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||| |||||||||||||||||||| |||    
T  22186186 cagagagtgagggtttgagaggaagaaagattctaccttggggactgctttaagtcccctatttatagaggtggatggctgcagagccgttgtaatggca 22186087  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||||| ||||||||| |||||||||||||    
T  22186086 caccttactcggacggttacaaaatcgtgggaag 22186053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 316 - 437
Target Start/End: Original strand, 4242567 - 4242688
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    |||||||| ||||||||| ||  ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4242567 aacctgagacgtgacataatcgttgtccttgaggattttatccgactcatgagcgcatatcctcccaggatacaactgttcttccccgttatgaatcata 4242666  T
Q  416 accggaggtgacagaacaactc 437  Q
    | || |||||||||||||||||    
T  4242667 atcgaaggtgacagaacaactc 4242688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 319 - 478
Target Start/End: Complemental strand, 51465601 - 51465454
Alignment:
Q  319 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 418  Q
    ||||||||||||||||||||||||||||  |||||||||          |||||||| || ||||||||||||||||||| ||||||||||||||||  |    
T  51465601 ctgaggcgtgacatagtcactgtccttggagattttatc----------gcgcatattcttccaggatacaacagttctttcccgttatgaatcatactc 51465512  T
Q  419 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    |||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  51465511 ggaggttacagaacaactcaaatttatctc--agatatcaggagatgtaacccagaaact 51465454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 9111542 - 9111622
Alignment:
Q  319 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttc 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9111542 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcttcccaggatacaacagttcttc 9111622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 21815723 - 21815619
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||    
T  21815723 cagagagtaagggttttagaggaagaaagattctaccttggagactgcattgagtcccatatttatagaggtggagggctgcagagctgttgtaatggca 21815624  T
Q  115 cacct 119  Q
    |||||    
T  21815623 cacct 21815619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 320 - 470
Target Start/End: Complemental strand, 43254230 - 43254081
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcataacc 418  Q
    |||||||||||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||   |||||||||| | |    
T  43254230 tgaggcgtgacaaagtcactgtccttaaggattt-attcgcctcataagcgcatatcctcccaggatacaacatgttcttcccatatatgaatcat-atc 43254133  T
Q  419 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacc 470  Q
     |||||||||||||||||  ||| ||||||||||||| || |||||||||||    
T  43254132 agaggtgacagaacaacttgaatctatctcaaagatagcaggagatgtaacc 43254081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 8990962 - 8990828
Alignment:
Q  15 cagagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| |||||||||   |||||||||| ||| ||||||| |||||| |||||||| ||||||||||||||| |||||||||||||| |    
T  8990962 cagagagtgagggttt-agaggaagagttagattctaccgtggggactgcagtgagtcccctatttacagaggtggagggctgtagagccgttgtaatgg 8990864  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||  ||||  |||||||||||||||||||||    
T  8990863 cacacctggctctagcggttacgaaatcgtgggaag 8990828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 233 - 401
Target Start/End: Original strand, 49387521 - 49387689
Alignment:
Q  233 ggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagt-gataaccttccaaaaagtaaaccattacataaacctgaggcgtgaca 331  Q
    |||||||||| |||  | |||| ||||||||||| || |||||||||||||  |||||||| ||||| ||||| |||||| |||| | ||||||||||||    
T  49387521 ggtgatttgacgtcaacgaaatcgaagtaaacaatcaggaaaccatgaaaggagataacctgccaaacagtaatccattatataa-catgaggcgtgaca 49387619  T
Q  332 tagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccc 401  Q
     |||||||| |||| ||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||    
T  49387620 aagtcactggccttaaggattt-attcgccttataagcgcatatcctcccaggatacaacatgttcttccc 49387689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 320 - 471
Target Start/End: Original strand, 38825479 - 38825630
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaac-agttcttccccgttatgaatcataacc 418  Q
    ||||| |||||  ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||| |||||||| | | |||||||||| | |    
T  38825479 tgaggtgtgacgaagtcactgtccttaaggattttatcctcctcataaacgcatatcctcccaggatacaacaagttcttctctgctatgaatcat-atc 38825577  T
Q  419 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaaccc 471  Q
      ||||| ||||||||||  ||||||||||||||||| ||  |||||||||||    
T  38825578 aaaggtggcagaacaacttgaatttatctcaaagataacagaagatgtaaccc 38825630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 19442310 - 19442177
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||||||||| ||||||  |||||| ||||||||||||||||||| |||||| ||||||||||||  |    
T  19442310 agagagtgagggttt-agaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagtgctgcaaagccgttgtaatgac 19442212  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||| || |||||| |||||||||||||| ||||||    
T  19442211 acatctgactctggcggttacgaaatcgggggaag 19442177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 19967618 - 19967488
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||||||| | |||||| ||||||| ||||||||||||||||||||| |||| | ||||||||||  |    
T  19967618 agagagtgagggttt-agaggaagagatggattctaccttagggactgctttgagtcccctatttatagaggtggagggttgcataaccgttgtaatgac 19967520  T
Q  114 acaccttactctgacggttacgaaatcgtggg 145  Q
    ||||||  ||||| ||||||||||||||||||    
T  19967519 acacctggctctggcggttacgaaatcgtggg 19967488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 8995610 - 8995505
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||| || |||| |||||| ||||||||||||||||||||||||||||||||||| | |  |||||||  ||||  ||||||||||||||    
T  8995610 agattctaccttggggaatgcagtgagtcccctatttatagaggtggagggctgcagagccgttg-attgacacacctagctctagcggttacgaaatcg 8995512  T
Q  142 tgggaag 148  Q
    |||||||    
T  8995511 tgggaag 8995505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 148
Target Start/End: Original strand, 9858996 - 9859104
Alignment:
Q  44 attctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacac---ctt-actctgacggttacgaaat 139  Q
    |||||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||  | ||||||   |||  ||||||||||||||||||    
T  9858996 attctaccttggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtggttgcacacacacttggctctgacggttacgaaat 9859095  T
Q  140 cgtgggaag 148  Q
    |||||||||    
T  9859096 cgtgggaag 9859104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 38621830 - 38621932
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||| ||||||| |||||| | ||| ||||||||||||||||||||||||||||||||| |||||  |  |||||  |||||||||||||    
T  38621830 agattctaccttggggactgcagtgagtcccttatatatagaggtggagggctgcagagccgttgtaatggcacatttggctctggtggttacgaaatcg 38621929  T
Q  142 tgg 144  Q
    |||    
T  38621930 tgg 38621932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 39197297 - 39197184
Alignment:
Q  352 tttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcataaccggaggtgacagaacaactcaaatttatctcaa 450  Q
    |||||| |||||||||||||||||||| ||||||||||||| || | || ||  |||||||||||  || ||||||||||||||||||||| ||||||||    
T  39197297 tttatctgcctcataagcgcatatcctaccaggatacaacaagtccctctccaatatgaatcatagtcgaaggtgacagaacaactcaaatatatctcaa 39197198  T
Q  451 agatatcatgagat 464  Q
    ||||| || |||||    
T  39197197 agataacaggagat 39197184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 472
Target Start/End: Original strand, 38828689 - 38828841
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaac-agttcttccccgttatgaatcataacc 418  Q
    |||||||||||  ||||||| ||||| |||||||||||||||| |||||| |||||| |||||||||| ||| ||||||||||   |||||||||| | |    
T  38828689 tgaggcgtgacgaagtcactatccttaaggattttatccgccttataagctcatatcttcccaggataaaacaagttcttccctactatgaatcat-atc 38828787  T
Q  419 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaaccca 472  Q
     ||| || ||||||||||  ||||||||| |||||||  |  ||||||||||||    
T  38828788 agagttggcagaacaacttgaatttatctaaaagataagagaagatgtaaccca 38828841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 170769 - 170684
Alignment:
Q  24 agggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaa 109  Q
    ||||||||||||   || |||||||||||||| | ||||  |||| |||||||||||||||||||| |  ||||||||||||||||    
T  170769 agggtttgagagtgtgagagattctaccttggaggctgcgatgagcctcctatttatagaggtggatgaatgcagagccgttgtaa 170684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 21501252 - 21501323
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca 392  Q
    |||||||||||| |||| || || || ||||||| ||||| |||||||| | ||||||||| |||||||||||    
T  21501252 tgaggcgtgacaaagtcgctatctttaaggattt-atccgtctcataagtgtatatcctcctaggatacaaca 21501323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 49390928 - 49390968
Alignment:
Q  352 tttatccgcctcataagcgcatatcctcccaggatacaaca 392  Q
    ||||| ||| ||||||||||||||||| |||||||||||||    
T  49390928 tttattcgcttcataagcgcatatccttccaggatacaaca 49390968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 316 - 478
Target Start/End: Complemental strand, 18594934 - 18594772
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  18594934 aacctgaggcgtgacattgtcactgtccttgaagattttatccgcctcataagcgcatattctcacaggatacaacagttcttccccgttatgaatcata 18594835  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    || | ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  18594834 actgaaggtgacagaacaactcaaatttatgtcaaagatatcaggagatgtaacccaaaaact 18594772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 36712849 - 36712720
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  36712849 cagagagtgagggtttgagaggaagaaagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca 36712750  T
Q  115 caccttactctgacggttacgaaatcgtgg 144  Q
    ||||| ||||||||||||||||||||||||    
T  36712749 cacctaactctgacggttacgaaatcgtgg 36712720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 5590897 - 5590764
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||||||||| |||    
T  5590897 cagagagtaagggtttgagaggaagaaagattctaccttggggactgcattgaatcccctatttatagaggtggagggcagcagagccgttgtaatggca 5590798  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||||||||||||||||| ||||||||    
T  5590797 caccttactctgacggttacgaaattgtgggaag 5590764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 23495348 - 23495481
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||| ||||| ||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  23495348 cagagagtgaaggttttagaggaagagagattctacattggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca 23495447  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| ||||||||||||||||||||||||||||    
T  23495448 cacctaactctgacggttacgaaatcgtgggaag 23495481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 316 - 470
Target Start/End: Original strand, 26703015 - 26703170
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaac-agttcttccccgttatgaatcat 414  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| | | |||||||||     
T  26703015 aacctgatgcgtgacttagtcactgtccttgaggattttatccgcctcataaacgcatatcctcccaagatacaacaagttcttctctggtatgaatcaa 26703114  T
Q  415 aaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacc 470  Q
    |||||||||||||||||||  |||||||||||||| |||||||| |||||||||||    
T  26703115 aaccggaggtgacagaacagttcaaatttatctcacagatatcaagagatgtaacc 26703170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 316 - 470
Target Start/End: Original strand, 26972748 - 26972903
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaac-agttcttccccgttatgaatcat 414  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| | | |||||||||     
T  26972748 aacctgatgcgtgacttagtcactgtccttgaggattttatccgcctcataaacgcatatcctcccaagatacaacaagttcttctctggtatgaatcaa 26972847  T
Q  415 aaccggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacc 470  Q
    |||||||||||||||||||  |||||||||||||| |||||||| |||||||||||    
T  26972848 aaccggaggtgacagaacagttcaaatttatctcacagatatcaagagatgtaacc 26972903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 20899796 - 20899663
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||  ||||||||| |||    
T  20899796 cagagagtgagggttttagaggaagaaagattcaaccttggggactgcattgagtcccctatttataaaggtggagggctgcagattcgttgtaatggca 20899697  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| ||||||||||||||||||||||||||||    
T  20899696 cacctaactctgacggttacgaaatcgtgggaag 20899663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 316 - 475
Target Start/End: Complemental strand, 39292218 - 39292066
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||     
T  39292218 aacctgaggtgtgatatagtcactgtccttaaggattttatccgcctcataagcgcatatccttccagaatacaacagttcttctccgttatgaatcat- 39292120  T
Q  416 accggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaa 475  Q
          ||||||| ||||||||||| | |||||||||||| |  ||||||||||||||||    
T  39292119 ------ggtgacataacaactcaaaataatctcaaagataaccggagatgtaacccagaa 39292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 33622686 - 33622557
Alignment:
Q  22 tgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacacctta 121  Q
    ||||||||||||||||||||| |||||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  33622686 tgagggtttgagaggaagaaatattctatcttagggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaattacacacctta 33622587  T
Q  122 ctctgac---ggttacgaaatcgtgggaag 148  Q
    |||||||   |||||||||||| |||||||    
T  33622586 ctctgacggtggttacgaaatcctgggaag 33622557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 28068224 - 28068090
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaaga--ttctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |||  ||||||||| | ||||||  |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  28068224 cagagagtgagggttt-agaggaagagagagattctaccttagggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatgg 28068126  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||  ||||| |||||||||||||||||||||    
T  28068125 cacacctggctctggcggttacgaaatcgtgggaag 28068090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 38608266 - 38608400
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa-gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    |||||||||||||||| ||||| ||||| ||||||||||| | |||||||||||||| |||||||||||||||||||| || ||||||||||||    ||    
T  38608266 cagagagtgagggttttagagggagaaaagattctaccttagggactgcattgagtcccctatttatagaggtggaggtctacagagccgttgtggaggc 38608365  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||  ||||| |||||||||||||||||||||    
T  38608366 acacctggctctggcggttacgaaatcgtgggaag 38608400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 42792481 - 42792614
Alignment:
Q  16 agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||| ||||||||| |||||| ||| |||||||||||||| || ||   |||||| |||| ||||||||||||||||||||||||| |||||| | |||    
T  42792481 agagaatgagggtttagagagggagatagattctaccttggggattgttatgagtcccctagttatagaggtggagggctgcagagcagttgtagtggca 42792580  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||  ||||| |||||||||||||||||||||    
T  42792581 cacctggctctggcggttacgaaatcgtgggaag 42792614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 15620364 - 15620258
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||| ||||||  |||||| |||||||||||||||| ||||||| ||||| |||||||| |||||| |  |||||||||||||||||| |    
T  15620364 agattctaccttggggactgctatgagtcccctatttatagaggtgaagggctgtagagctgttgtaatggcacacttggctctgacggttacgaaattg 15620265  T
Q  142 tgggaag 148  Q
    |||||||    
T  15620264 tgggaag 15620258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 5931190 - 5931323
Alignment:
Q  16 agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||||||||||||| ||| |  ||| |||||||| ||||| |||||   |||||| |||||||||||||||||||||||||||||||||||||||  ||    
T  5931190 agagagtgagggtttagagggagagatagattctatcttggggactgtcgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatgaca 5931289  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||   |||| |||||| ||||||||||||||    
T  5931290 cacctggttctggcggttatgaaatcgtgggaag 5931323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 22922839 - 22922705
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |  ||||||||||||| || ||   |||||| ||||||||||||||||||||||| ||||||||||||| |      
T  22922839 cagagagtgagggttt-agaggaagagatagattctaccttggggattgttatgagtcccctatttatagaggtggagggctacagagccgttgtagtga 22922741  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||  ||||  |||||||||||||||||||||    
T  22922740 cacacctggctctagcggttacgaaatcgtgggaag 22922705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 41037785 - 41037712
Alignment:
Q  75 atttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  41037785 atttatagaggtggagggctgcggagccgttgtaatggcacacctggctctggcggttacgaaatcgtgggaag 41037712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 22922242 - 22922108
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |  |||||||||||||  ||||   |||||| ||||||||||||||||||||||| ||||||||||||| |      
T  22922242 cagagagtgagggttt-agaggaagagatagattctaccttgggaactgttatgagtcccctatttatagaggtggagggctacagagccgttgtagtga 22922144  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||  |||||  |||||| |||||||||||||    
T  22922143 cacacctggctctggtggttacaaaatcgtgggaag 22922108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 443
Target Start/End: Complemental strand, 13292071 - 13291946
Alignment:
Q  317 acctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcata 415  Q
    ||||||||| ||||  ||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||| ||| | | ||||||||||     
T  13292071 acctgaggcatgacgaagttactgtccttaaagattt-atccgcctcataagcgcatatcctcccaggatacaacaggttattctctgatatgaatcat- 13291974  T
Q  416 accggaggtgacagaacaactcaaattt 443  Q
    | | ||||||| |||||||||| |||||    
T  13291973 atcagaggtgatagaacaactcgaattt 13291946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 31307320 - 31307390
Alignment:
Q  230 tgtggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaa-gtgataaccttccaaaa 299  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||| |||||||| | ||||||    
T  31307320 tgtggtgatttgaagtcggcaaaatcgaagtgaacaaacacgaaaccataaaaggtgataacttgccaaaa 31307390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 19330052 - 19329991
Alignment:
Q  87 ggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||| ||||||| ||||||| |||||||   ||||| |||||||||||||||||||||    
T  19330052 ggagggctacagagccattgtaatggcacaccaagctctggcggttacgaaatcgtgggaag 19329991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 8244511 - 8244596
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagag 100  Q
    |||||||||||||||  |||||||| |  ||||||||||||  |||||   |||||| | |||||||||||||||||||||||||||    
T  8244511 agagagtgagggtttt-gaggaagagatagattctaccttgaggactgatgtgagtcccttatttatagaggtggagggctgcagag 8244596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 23927252 - 23927179
Alignment:
Q  44 attctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacac 117  Q
    |||||||||||| | |||||  ||| |||||||||||| ||||||  |  ||||||||||||||||| ||||||    
T  23927252 attctaccttggaggctgcagggagcctcctatttataaaggtgggtgaatgcagagccgttgtaatggcacac 23927179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 14871 - 15004
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||| |||||||||||||||| |||    
T  14871 cagagagtgagggttttagaggaagaaagattctaccttggggactgcattgagtcccctatttataaaggtggatggccgcagagccgttgtaatggca 14970  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| ||||||||||||||||||||||||||||    
T  14971 cacctaactctgacggttacgaaatcgtgggaag 15004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 17086 - 17190
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||    
T  17086 cagagagtaagggttttagaggaagaaagattctaccttggagactgcattgagtcccatatttatagaggtggagggctgcagagctgttgtaatggca 17185  T
Q  115 cacct 119  Q
    |||||    
T  17186 cacct 17190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 7549 - 7417
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||    
T  7549 cagagggtgagggtttgagaggaagaaagattctaccttggggattgcattgagtcccctatttatagaggtggagggctgcaaagccgttgtaatggca 7450  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||||||||| ||||||||||||| |||||    
T  7449 caccttactctgac-gttacgaaatcgttggaag 7417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 11072 - 10939
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||| ||||||||| ||||||||||||||||| |||||| |||| |||||||||  ||||||||| ||||||||||||| |||||||||||||| |||    
T  11072 cagagaatgagggttttagaggaagaaagattctcccttggggactccattgagtccactatttataaaggtggagggctgtagagccgttgtaatggca 10973  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| |||||||||||||||||||| |||||||    
T  10972 cacctaactctgacggttacgaaatcatgggaag 10939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 127819 - 127699
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcata 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| | ||||||||||     
T  127819 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcagaaacgcatatcctcccatgatacaacagttcttccctgatatgaatcat- 127721  T
Q  416 accggaggtgacagaacaactc 437  Q
      | ||||||||||||||||||    
T  127720 gtcagaggtgacagaacaactc 127699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 320 - 437
Target Start/End: Complemental strand, 110236 - 110120
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataaccg 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| | | ||||||||||   |     
T  110236 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataaacgcatatcctcccaagatacaacagttcttcgctgatatgaatcat-gtca 110138  T
Q  420 gaggtgacagaacaactc 437  Q
    ||||||||||||||||||    
T  110137 gaggtgacagaacaactc 110120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 54770 - 54670
Alignment:
Q  48 taccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaa 147  Q
    |||||| | |||||||||||||| |||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  54770 tacctttgggactgcattgagtcccctatttatagaggtggagggctgcatagccgttgtaatggtacaccttactctgacggttacgaaatcatgggaa 54671  T
Q  148 g 148  Q
    |    
T  54670 g 54670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 47615 - 47482
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  47615 agagagtgagggttt-agaggaagagatagattctaccttggggactgctttgagtcccctatttatagaggtggagggctgcagagccgttgtaatggc 47517  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||| |  ||||| ||||||| |||| ||||||||    
T  47516 acacttggctctggcggttacaaaattgtgggaag 47482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 302 - 436
Target Start/End: Original strand, 6745 - 6877
Alignment:
Q  302 taaaccattacataaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccc 401  Q
    ||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||    
T  6745 taaaccattatctaaac-tgaggcgtgacatagtcactgtcattgaggattttatccgcctcataagtgcatatccttccatgatacaacagtttttccc 6843  T
Q  402 cgttatgaatcataaccggaggtgacagaacaact 436  Q
     | |||||||||| | | ||| |||||||||||||    
T  6844 tgatatgaatcat-atcagagatgacagaacaact 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 237 - 417
Target Start/End: Original strand, 4844 - 5024
Alignment:
Q  237 atttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaaaaagtaaaccattacataaacctgaggcgtgacatagtc 336  Q
    |||||| || ||||||||  || ||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||| |||| ||| |   ||    
T  4844 atttgaagttggcaaaatcaaattaaacaaacacgaaaccatgagagtgataacctgcaaaacagtaaaccattacataaaccttaggcatgataggatc 4943  T
Q  337 actgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcataac 417  Q
    ||||| ||| |||| |||||| ||||||||||| |||||||||||| ||||||||| |||||||   | |||||||||||||    
T  4944 actgttcttaagga-tttatctgcctcataagcacatatcctcccaagatacaacaggttcttctatgatatgaatcataac 5024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 478
Target Start/End: Original strand, 11634190 - 11634330
Alignment:
Q  338 ctgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcataaccggaggtgacagaacaact 436  Q
    |||| |||||||||||||||| |||| ||| |||||||||||||||||||||||| || |||||||||||||||||||||| | |||| ||| |||||||    
T  11634190 ctgttcttgaggattttatccacctcgtaaacgcatatcctcccaggatacaacatgtccttccccgttatgaatcataactgcaggtaacacaacaact 11634289  T
Q  437 caaatttatctcaaagatatcatgagatgtaacccagaaact 478  Q
    ||||||||||| ||| ||| ||| ||||| ||| ||||||||    
T  11634290 caaatttatct-aaaaataacataagatgcaactcagaaact 11634330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 16853183 - 16853075
Alignment:
Q  40 aaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaat 139  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |   |||||||| ||||||||  ||||| ||||||||||||    
T  16853183 aaagattctcccttggggactgcattgagtcccctatttatagaggtggagggctgcaaatatgttgtaatggcacacctggctctggcggttacgaaat 16853084  T
Q  140 cgtgggaag 148  Q
    |||||||||    
T  16853083 cgtgggaag 16853075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 472
Target Start/End: Original strand, 19930038 - 19930188
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcataacc 418  Q
    |||||||||||| |||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| |  ||||||||  | |    
T  19930038 tgaggcgtgacaaagtcaccgtccttaaggattt-atccgcctcataagcgcatatcctccca-gatacaacatgttcttccctgagatgaatca-catc 19930134  T
Q  419 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaaccca 472  Q
     ||||||| |||||||||  ||| ||||||||||||| || |||||||||||||    
T  19930135 agaggtgatagaacaacttgaatctatctcaaagatagcaggagatgtaaccca 19930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 22915051 - 22915185
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |  ||||||||||||| ||||||  |||||| |||||||||| |||||||| ||||||||||||||||||| |    
T  22915051 cagagagtgagggttt-agaggaagagatagattctaccttggggactgctatgagtcccctatttataaaggtggagagctgcagagccgttgtaatgg 22915149  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
     |||| |  ||| | |||||| ||||||||||||||    
T  22915150 tacacttggctccggcggttatgaaatcgtgggaag 22915185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 19790346 - 19790408
Alignment:
Q  86 tggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  19790346 tggagggctgcagagccgttgtaatggcacacctgactctgacggttacgaaatcgtgggaag 19790408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 316 - 415
Target Start/End: Original strand, 9372210 - 9372309
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcat 414  Q
    |||||||||| ||||  ||||||||||||| ||||||| || ||||||||||||||||||| ||||||||||||||| |||| |||| | ||||||||||    
T  9372210 aacctgaggcatgacgaagtcactgtccttaaggattt-attcgcctcataagcgcatatcgtcccaggatacaacaggttcatccctgatatgaatcat 9372308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 42253564 - 42253635
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca 392  Q
    |||||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||||| |||||||||||    
T  42253564 tgaggcgtgacaaagtcactgtccttaaggattt-acccgcctcataagcgcatatcctccaaggatacaaca 42253635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 436
Target Start/End: Complemental strand, 2353315 - 2353196
Alignment:
Q  316 aacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcat 414  Q
    |||||||||| |||   ||||| ||||||| ||||||| |||||||||||||| || |||||||||||||||||||| ||||||| | | ||||||||||    
T  2353315 aacctgaggcatgatgaagtcattgtccttaaggattt-atccgcctcataagtgcttatcctcccaggatacaacaggttcttctctgatatgaatcat 2353217  T
Q  415 aaccggaggtgacagaacaact 436  Q
     |   |||||||||||||||||    
T  2353216 -ataagaggtgacagaacaact 2353196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 320 - 415
Target Start/End: Original strand, 26445096 - 26445191
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca-gttcttccccgttatgaatcata 415  Q
    |||||| ||||| ||||||||||||| |||| |||||||||||||||| || |||||||  || ||||||||| ||||||||| | |||||||||||    
T  26445096 tgaggcatgacaaagtcactgtccttaagga-tttatccgcctcataatcgtatatcctgtcaagatacaacatgttcttccctgatatgaatcata 26445191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 19773385 - 19773462
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggag 90  Q
    ||||||||||||||||   ||||||| |  ||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  19773385 cagagagtgagggtttagaaggaagagatagattctaccttggggactgctgtgagtctcctatttatagaggtggag 19773462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 1998006 - 1998087
Alignment:
Q  16 agagagtgagggttt-gagaggaagaaagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgc 96  Q
    ||||||||||||||| ||||   ||| |||||||||||||| |||||| ||||||  ||||||||||||||||||| |||||    
T  1998006 agagagtgagggtttagagacagagacagattctaccttggggactgctttgagtaccctatttatagaggtggagagctgc 1998087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 16914764 - 16914837
Alignment:
Q  73 ctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtggga 146  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||  |   |||| |||||||||||||||||||    
T  16914764 ctatatatagaggtggagggctgcagagccattgtaatggcacagatcggtctggcggttacgaaatcgtggga 16914837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 19935237 - 19935297
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctccc 381  Q
    |||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||| |||||    
T  19935237 tgaggcgtgacaaagtcactgtccttaagga-tttatcctcctcataagcgcatattctccc 19935297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 22006518 - 22006587
Alignment:
Q  41 aagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaat 110  Q
    ||||||||||||||| ||||||   ||||| | ||| ||||||||||||||||||||||| |||||||||    
T  22006518 aagattctaccttggggactgctacgagtcccttatatatagaggtggagggctgcagagtcgttgtaat 22006587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 22014035 - 22014104
Alignment:
Q  41 aagattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaat 110  Q
    ||||||||||||||| ||||||   ||||| | ||| ||||||||||||||||||||||| |||||||||    
T  22014035 aagattctaccttggggactgctacgagtcccttatatatagaggtggagggctgcagagtcgttgtaat 22014104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 44635823 - 44635880
Alignment:
Q  91 ggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||||||||||||||| |||||| | | || | |||||||||||||||||||||    
T  44635823 ggctgcagagccgttgtaatggcacacgtgagtccgtcggttacgaaatcgtgggaag 44635880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 14658230 - 14658173
Alignment:
Q  334 gtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaca 392  Q
    |||| ||||||| ||||||| ||| || ||||||||||||||||| |||||||||||||    
T  14658230 gtcattgtccttaaggattt-atctgcatcataagcgcatatccttccaggatacaaca 14658173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 36639623 - 36639696
Alignment:
Q  44 attctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacac 117  Q
    |||||||||| | | ||||  |||| |||||||||||||||||||  |  ||||||||||||||||| ||||||    
T  36639623 attctaccttagaggctgcgatgaggctcctatttatagaggtgggtgaatgcagagccgttgtaatggcacac 36639696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 391458 - 391592
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |  ||||||||||||| ||||||  |||||| ||||||||||||||||||||| ||||||||||||||||| |    
T  391458 cagagagtgagggttt-agaggaagagatagattctaccttggggactgctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatgg 391556  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||  ||||| ||||||||||||  |||||||    
T  391557 cacacctggctctggcggttacgaaattatgggaag 391592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 380763 - 380894
Alignment:
Q  17 gagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||||||| ||||||||| |  |||| |||| ||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  380763 gagagtgagggttt-agaggaagagatagatt-taccatggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca 380860  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||  |||||  ||||||||||| ||| ||||    
T  380861 cacctggctctggaggttacgaaattgtgagaag 380894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 26200 - 26311
Alignment:
Q  212 gagaacaataaacttatctgtggtgatttgatgtcggcaaaattgaagtaaacaaacacgaaaccatgaaagtgataaccttccaaaaagtaaaccatta 311  Q
    ||||||||| ||||||| || ||||||||||||| |  ||| | |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  26200 gagaacaatgaacttatttgcggtgatttgatgttgt-aaattcgaagtaaacaaatacgaaaccatgaaagtgataacctgccaagaagtaaaccatta 26298  T
Q  312 cataaacctgagg 324  Q
    |||||||||||||    
T  26299 cataaacctgagg 26311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 68700 - 68806
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    ||||||||||||||  |||||  |||||| |||||||||||||||||||||||||| ||||||||||||  |||||||| || || ||||||||||||||    
T  68700 agattctaccttgggcactgcggtgagtcccctatttatagaggtggagggctgcaaagccgttgtaatgacacaccttgctttggcggttacgaaatcg 68799  T
Q  142 tgggaag 148  Q
    |||||||    
T  68800 tgggaag 68806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 74872 - 74978
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||||| || |||  |||||| |||||||||||||||||||||||| |||||||||||||| ||||||||  ||||| | |||| |||||||    
T  74872 agattctaccttggggaatgcggtgagtcccctatttatagaggtggagggctgtagagccgttgtaatggcacacctggctctggcagttatgaaatcg 74971  T
Q  142 tgggaag 148  Q
    | |||||    
T  74972 tcggaag 74978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 4397 - 4265
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |  ||||||  ||||| |||||   |||||| ||||||||||||||||||||||||||||||||||||| | |    
T  4397 cagagagtgagggttt-agaggaagagatagattctctcttggggactgatgtgagtcccctatttatagaggtggagggctgcagagccgttgtagtgg 4299  T
Q  113 cacaccttactctgacggttacgaaatcgtggga 146  Q
    |||||||  |||||  ||||||||||||||||||    
T  4298 cacacctggctctggtggttacgaaatcgtggga 4265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 1609 - 1741
Alignment:
Q  17 gagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagca 114  Q
    |||||||||||||| ||||||||| |  |||||||| |||| |||||   |||||| |||||||||||||||||| |||||||||||||||||||| |||    
T  1609 gagagtgagggttt-agaggaagagatagattctacattggggactgttgtgagtcccctatttatagaggtggatggctgcagagccgttgtaatggca 1707  T
Q  115 caccttactctgacggttacgaaatcgtgggaag 148  Q
     || |  ||||| |||||||||||||||||||||    
T  1708 tacttggctctggcggttacgaaatcgtgggaag 1741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 15364 - 15498
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||||||||| ||||||||| |  |||||||||  || |||||   |||||| ||||||||||||||||||||||||||||||||||| ||| |    
T  15364 cagagagtgagggttt-agaggaagagatagattctaccgcggggactgttatgagtcccctatttatagaggtggagggctgcagagccgttgcaatgg 15462  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||  ||| |||||| ||||||| |||||||||||||    
T  15463 catgcctgactctggcggttactaaatcgtgggaag 15498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 148
Target Start/End: Complemental strand, 16487 - 16382
Alignment:
Q  44 attctaccttggtg-actgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgt 142  Q
    |||||||||||| | ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||  ||||| ||||||| |||||||    
T  16487 attctaccttgggggactgctttgagtcccctatttatagaggtggagggctgcagagccattgtaatggtacacctggctctggcggttacaaaatcgt 16388  T
Q  143 gggaag 148  Q
    ||||||    
T  16387 gggaag 16382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 253312 - 253446
Alignment:
Q  15 cagagagtgagggtttgagaggaagaa--agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    |||||||||| ||||| |||||||||   |||||||||||||| ||||| | |||||| ||||| |||| ||||||| ||||||| || ||||||||| |    
T  253312 cagagagtgacggttt-agaggaagagttagattctaccttggggactgtagtgagtcccctatatataaaggtggacggctgcaaagtcgttgtaatgg 253410  T
Q  113 cacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||||  ||||| |||||||||||||||||||||    
T  253411 cacacctggctctggcggttacgaaatcgtgggaag 253446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 242731 - 242806
Alignment:
Q  73 ctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||  ||||  |||||||| ||||||||||||    
T  242731 ctatatatagaggtggagggcggcagagccgttgtaatggcacacctggctcttgcggttacgtaatcgtgggaag 242806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 19150 - 19254
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||| ||| ||||||||| |  ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| ||||||  ||    
T  19150 agagagtgaggattt-agaggaagagatagattctaccttggggactgcagtgagtcccctatttatagaggtggagggctgcagagccattgtaacggc 19248  T
Q  114 acacct 119  Q
    ||||||    
T  19249 acacct 19254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 1237 - 1107
Alignment:
Q  19 gagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcaca 116  Q
    |||||||||||| ||||||||| |  |||||||| |||| ||||||  |||||| ||||||||||||||||||||||| || |||||||||||| | |||    
T  1237 gagtgagggttt-agaggaagagatagattctacgttggagactgctgtgagtcccctatttatagaggtggagggctacatagccgttgtaatggaaca 1139  T
Q  117 ccttactctgacggttacgaaatcgtgggaag 148  Q
    |||  ||||  || ||||||||||||||||||    
T  1138 cctggctctagcgattacgaaatcgtgggaag 1107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 151490 - 151357
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| | ||||||| |  ||||||||||| | || |||  |||||| ||||||||||||||||||||||||||||||||||||| | |     
T  151490 agagagtgagggtttaa-aggaagagatagattctaccttagggaatgctgtgagtcccctatttatagaggtggagggctgcagagccgttgtagtgga 151392  T
Q  114 acaccttactctgacggttacgaaatcgtgggaag 148  Q
    | ||||  ||||  |||||||||||||||||||||    
T  151391 agacctggctctagcggttacgaaatcgtgggaag 151357  T

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Target: scaffold0989 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 1721 - 1617
Alignment:
Q  16 agagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagc 113  Q
    ||||||||||||||| ||||||||| |  ||||||||||||| |||||| ||||||  |||||||||||||||||| ||||| ||||| |||||||| ||    
T  1721 agagagtgagggttt-agaggaagagatagattctaccttggggactgctttgagtgccctatttatagaggtggacggctgtagagctgttgtaatggc 1623  T
Q  114 acacct 119  Q
    ||||||    
T  1622 acacct 1617  T

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Target: scaffold0150 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 30230 - 30124
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||| | ||||||  |||||| | ||||||||||||||||||||||||||||| ||||||  | ||||||  |||||  ||||||||||| |    
T  30230 agattctaccttagggactgctgtgagtcccgtatttatagaggtggagggctgcagagccattgtaacggaacacctggctctggtggttacgaaattg 30131  T
Q  142 tgggaag 148  Q
    |||||||    
T  30130 tgggaag 30124  T

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Target: scaffold0111 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 3002 - 2897
Alignment:
Q  42 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcg 141  Q
    |||||||||||| | |||||   |||||| ||||| ||||||||||||| |||||||||| |||||||| |||||||   ||||| ||||||||||||||    
T  3002 agattctaccttcgggactgttatgagtc-cctatatatagaggtggagagctgcagagctgttgtaatggcacaccaggctctggcggttacgaaatcg 2904  T
Q  142 tgggaag 148  Q
    |||||||    
T  2903 tgggaag 2897  T

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Target: scaffold0192 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 12373 - 12456
Alignment:
Q  65 tgagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||| |||||||   ||||| ||||||| ||||| |||||||    
T  12373 tgagtcccctatatatagaggtgaagggctgcagagccgttgtaatggcacaccaggctctggcggttacaaaatcatgggaag 12456  T

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Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 37374 - 37292
Alignment:
Q  66 gagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| ||||| |||||||||||||||||||||||||||||| || |||| ||   ||||| |||||| ||||||||||||||    
T  37374 gagtcccctatatatagaggtggagggctgcagagccgttgtgatggcacgccaggctctggcggttatgaaatcgtgggaag 37292  T

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Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 86563 - 86433
Alignment:
Q  15 cagagagtgagggtttgagaggaagaaa--gattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaatag 112  Q
    ||||||||||| |||| |||||||||||  ||||||| ||| | ||||||  |||||| ||||| ||||||||||||||| |||| || ||||||||| |    
T  86563 cagagagtgagagttt-agaggaagaaatagattctatcttcgggactgctatgagtcccctatatatagaggtggagggttgcaaagtcgttgtaatgg 86465  T
Q  113 cacaccttactctgacggttacgaaatcgtgg 144  Q
    |||||    ||||| || ||||||||||||||    
T  86464 cacactaggctctggcgattacgaaatcgtgg 86433  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 20455 - 20389
Alignment:
Q  44 attctaccttggtgactgcattgagtctcctatttatagaggtggagggctgcagagccgttgtaat 110  Q
    |||||||||||| |||||    ||||| ||||||| |||||||||||||||||||||||||||||||    
T  20455 attctaccttggggactgttaagagtcccctatttttagaggtggagggctgcagagccgttgtaat 20389  T

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Target: scaffold0216 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 437
Target Start/End: Complemental strand, 12194 - 12112
Alignment:
Q  355 atccgcctcataagcgcatatcctcccaggatacaac-agttcttccccgttatgaatcataaccggaggtgacagaacaactc 437  Q
    |||||||||| ||||||||||| ||| |||||||||| ||||||||||   |||||||||| | | ||||||||||||||||||    
T  12194 atccgcctcacaagcgcatatcatcctaggatacaacaagttcttcccttatatgaatcat-atcagaggtgacagaacaactc 12112  T

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Target: scaffold0063 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 36928 - 36846
Alignment:
Q  66 gagtctcctatttatagaggtggagggctgcagagccgttgtaatagcacaccttactctgacggttacgaaatcgtgggaag 148  Q
    ||||| ||||| |||||||||||  ||||| |||||||||||||| |||||| |   || |||||||||||||| ||||||||    
T  36928 gagtcccctatatatagaggtgggtggctgtagagccgttgtaatggcacacgtgtgtccgacggttacgaaattgtgggaag 36846  T

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Target: scaffold0933 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 859 - 804
Alignment:
Q  320 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatc 376  Q
    |||||||||||| ||||||||||||| |||  ||| ||||||||||||| |||||||    
T  859 tgaggcgtgacaaagtcactgtcctt-aggtatttttccgcctcataagagcatatc 804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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