View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20496_low_4 (Length: 592)

Name: NF20496_low_4
Description: NF20496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20496_low_4
NF20496_low_4
[»] chr1 (70 HSPs)
chr1 (129-344)||(37711718-37711933)
chr1 (339-466)||(39864146-39864273)
chr1 (339-466)||(26093429-26093556)
chr1 (339-466)||(16395003-16395129)
chr1 (338-467)||(6160414-6160543)
chr1 (356-467)||(12039116-12039227)
chr1 (339-462)||(28749030-28749153)
chr1 (339-466)||(49223942-49224069)
chr1 (338-467)||(31978607-31978736)
chr1 (339-463)||(31042835-31042959)
chr1 (338-466)||(32970522-32970650)
chr1 (339-466)||(37506159-37506289)
chr1 (351-466)||(917059-917174)
chr1 (356-466)||(9307662-9307772)
chr1 (356-466)||(23168966-23169076)
chr1 (349-466)||(33733229-33733345)
chr1 (338-466)||(34031481-34031610)
chr1 (338-415)||(38787427-38787504)
chr1 (338-466)||(5179354-5179482)
chr1 (374-466)||(7759250-7759342)
chr1 (342-466)||(20209799-20209923)
chr1 (339-467)||(40144803-40144931)
chr1 (349-466)||(15699157-15699275)
chr1 (367-500)||(35538644-35538777)
chr1 (349-466)||(42410029-42410146)
chr1 (350-467)||(45331375-45331492)
chr1 (339-466)||(24991609-24991736)
chr1 (339-429)||(11449955-11450045)
chr1 (333-415)||(13579571-13579653)
chr1 (381-467)||(51028491-51028577)
chr1 (346-415)||(30754904-30754973)
chr1 (338-447)||(41080652-41080761)
chr1 (339-466)||(41121778-41121908)
chr1 (339-429)||(27687313-27687404)
chr1 (350-502)||(35682773-35682925)
chr1 (339-466)||(44707716-44707843)
chr1 (339-466)||(52429379-52429506)
chr1 (356-466)||(6023622-6023732)
chr1 (349-447)||(6267822-6267920)
chr1 (346-466)||(36701956-36702074)
chr1 (346-466)||(36718060-36718178)
chr1 (354-462)||(32825963-32826070)
chr1 (361-432)||(35367622-35367694)
chr1 (374-466)||(37276496-37276588)
chr1 (343-466)||(2572504-2572626)
chr1 (367-466)||(12151211-12151310)
chr1 (399-466)||(14757610-14757677)
chr1 (359-467)||(17988534-17988644)
chr1 (361-415)||(43500762-43500816)
chr1 (394-447)||(6365685-6365738)
chr1 (367-432)||(21909990-21910055)
chr1 (369-466)||(24880911-24881008)
chr1 (367-419)||(4659839-4659891)
chr1 (339-462)||(10495878-10496003)
chr1 (375-467)||(22181370-22181462)
chr1 (388-466)||(8896337-8896415)
chr1 (350-432)||(3260655-3260738)
chr1 (375-466)||(9379267-9379358)
chr1 (349-431)||(7439881-7439963)
chr1 (373-466)||(27896990-27897083)
chr1 (355-432)||(31154197-31154273)
chr1 (394-466)||(3312146-3312218)
chr1 (388-427)||(978862-978901)
chr1 (338-407)||(7352380-7352450)
chr1 (356-410)||(26252504-26252558)
chr1 (361-415)||(34332422-34332476)
chr1 (367-420)||(26255980-26256033)
chr1 (388-445)||(29074940-29074997)
chr1 (350-447)||(44761498-44761595)
chr1 (388-448)||(43614450-43614510)
[»] chr2 (50 HSPs)
chr2 (359-561)||(43115773-43115987)
chr2 (349-466)||(39691525-39691642)
chr2 (349-466)||(37322463-37322581)
chr2 (338-466)||(16463724-16463852)
chr2 (344-467)||(45235615-45235738)
chr2 (338-466)||(36354393-36354521)
chr2 (339-466)||(5789599-5789726)
chr2 (338-467)||(39785619-39785751)
chr2 (349-467)||(43410460-43410578)
chr2 (349-466)||(15359048-15359165)
chr2 (367-466)||(16805916-16806015)
chr2 (367-466)||(16845197-16845296)
chr2 (355-448)||(19937730-19937823)
chr2 (374-467)||(41220932-41221025)
chr2 (342-466)||(14523326-14523450)
chr2 (393-500)||(1206708-1206815)
chr2 (356-443)||(3323254-3323341)
chr2 (339-466)||(25637516-25637642)
chr2 (350-445)||(32783420-32783515)
chr2 (338-428)||(26607918-26608008)
chr2 (377-466)||(35313922-35314011)
chr2 (384-448)||(43699595-43699659)
chr2 (339-466)||(17695365-17695492)
chr2 (346-447)||(10005083-10005183)
chr2 (338-466)||(36794319-36794447)
chr2 (339-466)||(8947003-8947130)
chr2 (344-415)||(34120395-34120466)
chr2 (378-466)||(39329652-39329742)
chr2 (356-425)||(39443789-39443858)
chr2 (367-466)||(16377635-16377734)
chr2 (360-415)||(31448665-31448720)
chr2 (350-407)||(5272155-5272212)
chr2 (367-467)||(34225624-34225724)
chr2 (355-466)||(18853167-18853279)
chr2 (381-466)||(17346356-17346440)
chr2 (367-432)||(27501517-27501582)
chr2 (378-467)||(27866526-27866614)
chr2 (397-454)||(36173351-36173408)
chr2 (356-415)||(11742497-11742556)
chr2 (378-425)||(15435447-15435494)
chr2 (394-464)||(19426492-19426563)
chr2 (372-439)||(28170567-28170634)
chr2 (380-427)||(33729909-33729956)
chr2 (460-502)||(7438936-7438978)
chr2 (460-502)||(35242381-35242423)
chr2 (461-502)||(5789733-5789774)
chr2 (339-376)||(30544408-30544445)
chr2 (385-466)||(31976383-31976464)
chr2 (369-466)||(35242278-35242375)
chr2 (460-500)||(36354527-36354567)
[»] chr5 (50 HSPs)
chr5 (337-466)||(7827875-7828004)
chr5 (361-504)||(2232046-2232197)
chr5 (339-466)||(40530175-40530302)
chr5 (339-466)||(40899953-40900080)
chr5 (349-466)||(27542830-27542947)
chr5 (339-466)||(4818586-4818713)
chr5 (339-466)||(38508138-38508265)
chr5 (345-466)||(21060665-21060786)
chr5 (358-466)||(6753629-6753736)
chr5 (339-466)||(6315728-6315855)
chr5 (339-455)||(30512636-30512752)
chr5 (339-455)||(30552976-30553092)
chr5 (339-462)||(32440180-32440303)
chr5 (356-445)||(9515802-9515891)
chr5 (358-465)||(11904241-11904349)
chr5 (338-429)||(843509-843600)
chr5 (367-466)||(8698344-8698443)
chr5 (367-466)||(8724988-8725087)
chr5 (361-436)||(15818453-15818528)
chr5 (352-466)||(27580635-27580749)
chr5 (328-466)||(1248544-1248682)
chr5 (356-466)||(29374377-29374487)
chr5 (339-432)||(2588019-2588112)
chr5 (369-466)||(6754064-6754160)
chr5 (339-447)||(41478881-41478989)
chr5 (356-467)||(22848352-22848463)
chr5 (338-466)||(31655088-31655216)
chr5 (367-467)||(42803599-42803699)
chr5 (350-432)||(3076659-3076740)
chr5 (338-466)||(41062113-41062238)
chr5 (368-466)||(41496115-41496213)
chr5 (354-447)||(41492356-41492449)
chr5 (351-415)||(42922830-42922894)
chr5 (356-467)||(29570426-29570537)
chr5 (368-462)||(15439299-15439393)
chr5 (378-439)||(6615870-6615931)
chr5 (350-466)||(11796129-11796245)
chr5 (367-466)||(29856082-29856179)
chr5 (367-467)||(37184058-37184158)
chr5 (369-415)||(19930032-19930078)
chr5 (384-466)||(5731811-5731893)
chr5 (393-466)||(4441056-4441129)
chr5 (382-467)||(8493832-8493917)
chr5 (388-447)||(18890555-18890614)
chr5 (460-502)||(9515723-9515765)
chr5 (388-466)||(18841514-18841592)
chr5 (464-492)||(843285-843313)
chr5 (339-432)||(3348074-3348169)
chr5 (355-427)||(5282416-5282488)
chr5 (342-414)||(31747969-31748041)
[»] chr4 (70 HSPs)
chr4 (338-466)||(11907557-11907685)
chr4 (338-466)||(32884836-32884964)
chr4 (367-500)||(46396870-46397003)
chr4 (344-467)||(2653454-2653575)
chr4 (338-466)||(49428300-49428428)
chr4 (339-466)||(33790690-33790817)
chr4 (339-466)||(38405061-38405188)
chr4 (339-465)||(47464324-47464450)
chr4 (338-466)||(52247386-52247514)
chr4 (338-466)||(52859757-52859885)
chr4 (331-466)||(49175885-49176020)
chr4 (347-445)||(51625139-51625237)
chr4 (337-466)||(34360690-34360819)
chr4 (339-502)||(4972559-4972722)
chr4 (339-466)||(7061623-7061750)
chr4 (339-466)||(17114475-17114602)
chr4 (339-466)||(17237255-17237382)
chr4 (339-466)||(42517598-42517724)
chr4 (339-466)||(47772978-47773105)
chr4 (349-500)||(28500860-28501015)
chr4 (354-466)||(2066824-2066936)
chr4 (339-467)||(38502441-38502569)
chr4 (367-466)||(44536183-44536282)
chr4 (342-452)||(8175542-8175652)
chr4 (356-466)||(40122830-40122940)
chr4 (339-439)||(6609823-6609924)
chr4 (350-465)||(11288600-11288714)
chr4 (339-466)||(16821290-16821417)
chr4 (339-466)||(36985821-36985948)
chr4 (339-445)||(43237299-43237405)
chr4 (361-467)||(52869106-52869212)
chr4 (345-466)||(3689597-3689718)
chr4 (338-466)||(6643618-6643746)
chr4 (339-467)||(32469907-32470035)
chr4 (356-448)||(49747014-49747105)
chr4 (380-467)||(29575142-29575229)
chr4 (367-466)||(30192240-30192339)
chr4 (367-466)||(35311210-35311309)
chr4 (356-466)||(2942621-2942730)
chr4 (373-466)||(35380326-35380419)
chr4 (339-500)||(27880201-27880363)
chr4 (352-464)||(42616875-42616987)
chr4 (337-462)||(461997-462122)
chr4 (338-415)||(3669965-3670042)
chr4 (354-447)||(54506842-54506935)
chr4 (352-415)||(50263904-50263967)
chr4 (339-466)||(53346794-53346921)
chr4 (378-466)||(19265843-19265931)
chr4 (355-415)||(25141889-25141949)
chr4 (338-466)||(30682155-30682282)
chr4 (339-466)||(22130078-22130209)
chr4 (367-465)||(35998847-35998945)
chr4 (355-465)||(53412144-53412254)
chr4 (356-464)||(47358925-47359033)
chr4 (402-466)||(50264102-50264166)
chr4 (391-438)||(25869855-25869902)
chr4 (356-466)||(38663424-38663533)
chr4 (349-466)||(25233216-25233333)
chr4 (350-447)||(41711426-41711523)
chr4 (339-432)||(48914102-48914195)
chr4 (384-415)||(34321715-34321746)
chr4 (367-461)||(5618582-5618676)
chr4 (384-466)||(21240708-21240790)
chr4 (400-466)||(26147635-26147701)
chr4 (356-466)||(39397379-39397489)
chr4 (339-464)||(18532216-18532341)
chr4 (394-431)||(26885504-26885541)
chr4 (338-419)||(46878813-46878894)
chr4 (383-447)||(3098772-3098836)
chr4 (387-439)||(21325171-21325223)
[»] chr3 (58 HSPs)
chr3 (349-455)||(10366605-10366711)
chr3 (332-466)||(37311985-37312119)
chr3 (339-466)||(8679007-8679134)
chr3 (339-466)||(37695618-37695746)
chr3 (335-466)||(30190609-30190740)
chr3 (356-467)||(36460386-36460497)
chr3 (349-466)||(24569063-24569180)
chr3 (349-500)||(49830125-49830282)
chr3 (338-466)||(19823046-19823174)
chr3 (339-466)||(29023919-29024045)
chr3 (367-466)||(43253844-43253943)
chr3 (349-467)||(11905856-11905974)
chr3 (349-455)||(51837922-51838028)
chr3 (331-439)||(50035162-50035270)
chr3 (356-502)||(31158492-31158639)
chr3 (338-466)||(45710885-45711013)
chr3 (338-415)||(17652834-17652911)
chr3 (338-466)||(1778678-1778805)
chr3 (339-466)||(11632116-11632242)
chr3 (355-454)||(14194602-14194701)
chr3 (339-466)||(36476619-36476746)
chr3 (338-445)||(37497548-37497655)
chr3 (349-466)||(52290928-52291045)
chr3 (367-455)||(27471381-27471469)
chr3 (356-428)||(33491053-33491125)
chr3 (355-462)||(12736541-12736648)
chr3 (339-454)||(44301609-44301724)
chr3 (339-465)||(38795380-38795506)
chr3 (339-455)||(5322892-5323006)
chr3 (367-466)||(28690763-28690862)
chr3 (349-464)||(37772927-37773042)
chr3 (356-467)||(3313288-3313395)
chr3 (338-412)||(34957592-34957666)
chr3 (349-455)||(53560263-53560369)
chr3 (339-432)||(51064771-51064864)
chr3 (384-466)||(23004380-23004462)
chr3 (338-412)||(21918364-21918441)
chr3 (366-465)||(34750532-34750631)
chr3 (355-462)||(48540969-48541076)
chr3 (368-467)||(54726519-54726618)
chr3 (388-466)||(3901151-3901229)
chr3 (367-429)||(7757599-7757661)
chr3 (349-455)||(19609345-19609451)
chr3 (347-429)||(43719338-43719420)
chr3 (341-466)||(19611944-19612068)
chr3 (391-466)||(12904899-12904975)
chr3 (359-466)||(26467146-26467252)
chr3 (388-467)||(30682068-30682147)
chr3 (394-467)||(54477467-54477540)
chr3 (339-415)||(23068286-23068362)
chr3 (367-467)||(30711107-30711207)
chr3 (356-432)||(38137413-38137489)
chr3 (388-448)||(44684988-44685048)
chr3 (339-418)||(49447747-49447826)
chr3 (349-427)||(40462386-40462464)
chr3 (401-445)||(24245109-24245153)
chr3 (383-447)||(29595724-29595788)
chr3 (460-500)||(39043843-39043883)
[»] chr7 (62 HSPs)
chr7 (338-466)||(83427-83555)
chr7 (339-466)||(13962001-13962128)
chr7 (339-445)||(44180268-44180374)
chr7 (338-466)||(16560529-16560657)
chr7 (338-466)||(16605005-16605133)
chr7 (338-466)||(24516248-24516376)
chr7 (339-466)||(26974068-26974198)
chr7 (350-466)||(27921030-27921146)
chr7 (338-466)||(28103775-28103903)
chr7 (339-466)||(7463255-7463382)
chr7 (339-466)||(34947542-34947669)
chr7 (348-466)||(759060-759178)
chr7 (368-466)||(41506054-41506152)
chr7 (349-466)||(42935703-42935820)
chr7 (361-466)||(12631347-12631452)
chr7 (381-466)||(34100549-34100634)
chr7 (338-466)||(9786030-9786158)
chr7 (338-466)||(11373387-11373515)
chr7 (350-462)||(40076361-40076473)
chr7 (367-466)||(5524422-5524521)
chr7 (339-466)||(16904421-16904548)
chr7 (367-466)||(38391790-38391889)
chr7 (356-466)||(22738743-22738853)
chr7 (361-466)||(19271715-19271820)
chr7 (338-415)||(46211524-46211601)
chr7 (338-466)||(2850840-2850968)
chr7 (338-466)||(28202268-28202396)
chr7 (356-467)||(46478270-46478381)
chr7 (361-467)||(21759966-21760072)
chr7 (367-461)||(33819261-33819355)
chr7 (342-467)||(29835377-29835502)
chr7 (338-466)||(32018671-32018799)
chr7 (367-466)||(8592428-8592527)
chr7 (356-466)||(7457398-7457508)
chr7 (339-466)||(21390337-21390466)
chr7 (349-415)||(44424228-44424294)
chr7 (355-466)||(2459513-2459622)
chr7 (367-455)||(30866020-30866108)
chr7 (339-466)||(23670528-23670654)
chr7 (339-402)||(36790852-36790915)
chr7 (356-466)||(21350605-21350712)
chr7 (350-466)||(31930468-31930584)
chr7 (367-462)||(37245736-37245833)
chr7 (367-500)||(32346040-32346185)
chr7 (359-415)||(48608955-48609011)
chr7 (367-466)||(49101705-49101807)
chr7 (367-466)||(3178192-3178291)
chr7 (361-466)||(43873965-43874070)
chr7 (339-466)||(17828309-17828438)
chr7 (338-401)||(34635958-34636021)
chr7 (381-466)||(32018917-32019003)
chr7 (400-466)||(35333085-35333151)
chr7 (394-464)||(47045469-47045538)
chr7 (366-427)||(4958597-4958658)
chr7 (338-383)||(6494918-6494963)
chr7 (350-462)||(39452390-39452501)
chr7 (460-502)||(11373521-11373563)
chr7 (460-502)||(46478386-46478428)
chr7 (349-442)||(19060371-19060464)
chr7 (459-500)||(48608862-48608903)
chr7 (460-500)||(41506158-41506198)
chr7 (422-466)||(42796050-42796094)
[»] chr8 (60 HSPs)
chr8 (339-466)||(10179901-10180028)
chr8 (349-467)||(32476321-32476439)
chr8 (361-466)||(1875568-1875673)
chr8 (338-466)||(39482650-39482778)
chr8 (339-466)||(45425620-45425747)
chr8 (339-466)||(11976890-11977017)
chr8 (351-466)||(31271056-31271171)
chr8 (364-466)||(42972487-42972589)
chr8 (349-466)||(51148-51264)
chr8 (338-439)||(39405824-39405925)
chr8 (350-466)||(13335251-13335367)
chr8 (362-466)||(21216078-21216182)
chr8 (338-466)||(40996318-40996446)
chr8 (367-466)||(9300095-9300194)
chr8 (339-466)||(10097945-10098072)
chr8 (354-445)||(36967417-36967508)
chr8 (350-467)||(7172948-7173065)
chr8 (361-466)||(26626088-26626193)
chr8 (350-466)||(4428317-4428432)
chr8 (349-467)||(34393918-34394036)
chr8 (349-466)||(17719222-17719339)
chr8 (349-466)||(22771799-22771916)
chr8 (350-415)||(32678804-32678869)
chr8 (381-466)||(41092029-41092114)
chr8 (338-466)||(2767244-2767372)
chr8 (339-466)||(31231765-31231893)
chr8 (394-466)||(44761503-44761575)
chr8 (357-455)||(7703128-7703226)
chr8 (367-465)||(33765696-33765794)
chr8 (366-459)||(39329061-39329154)
chr8 (339-439)||(34948641-34948741)
chr8 (367-466)||(31082654-31082753)
chr8 (339-441)||(6795999-6796101)
chr8 (350-448)||(9839791-9839889)
chr8 (343-432)||(1739709-1739798)
chr8 (397-466)||(42887035-42887104)
chr8 (356-431)||(6611767-6611842)
chr8 (384-447)||(40028570-40028632)
chr8 (385-467)||(396611-396693)
chr8 (381-447)||(12559647-12559712)
chr8 (382-439)||(10953405-10953462)
chr8 (382-439)||(10961410-10961467)
chr8 (338-447)||(27294012-27294121)
chr8 (367-432)||(29226213-29226278)
chr8 (394-455)||(39890667-39890728)
chr8 (367-466)||(14854916-14855015)
chr8 (388-466)||(5053156-5053234)
chr8 (369-427)||(9549999-9550057)
chr8 (388-466)||(31331443-31331521)
chr8 (356-462)||(39300912-39301018)
chr8 (366-428)||(39329370-39329431)
chr8 (460-502)||(17823908-17823950)
chr8 (400-466)||(17823956-17824022)
chr8 (367-433)||(21649320-21649386)
chr8 (393-447)||(34057626-34057680)
chr8 (385-415)||(39465809-39465839)
chr8 (394-467)||(5356634-5356706)
chr8 (460-500)||(10180034-10180074)
chr8 (364-419)||(15249678-15249736)
chr8 (460-500)||(39301043-39301083)
[»] chr6 (38 HSPs)
chr6 (339-466)||(11655898-11656025)
chr6 (339-466)||(15058152-15058279)
chr6 (339-463)||(23142705-23142829)
chr6 (338-466)||(29363341-29363469)
chr6 (367-466)||(1781837-1781936)
chr6 (356-466)||(3720210-3720320)
chr6 (349-466)||(1955941-1956058)
chr6 (338-466)||(13087565-13087693)
chr6 (338-462)||(32440596-32440720)
chr6 (339-466)||(3291720-3291847)
chr6 (338-467)||(21010211-21010340)
chr6 (346-466)||(1063562-1063682)
chr6 (338-466)||(6834320-6834448)
chr6 (367-466)||(13909459-13909558)
chr6 (338-445)||(31894161-31894268)
chr6 (344-445)||(27448113-27448214)
chr6 (339-466)||(6801966-6802093)
chr6 (347-466)||(7920274-7920392)
chr6 (356-445)||(181612-181700)
chr6 (388-497)||(27823307-27823416)
chr6 (395-466)||(15582318-15582389)
chr6 (351-466)||(30716935-30717050)
chr6 (394-466)||(1225082-1225154)
chr6 (382-466)||(24983444-24983528)
chr6 (346-446)||(28101318-28101418)
chr6 (368-415)||(5302437-5302484)
chr6 (383-455)||(2423664-2423736)
chr6 (393-465)||(17835420-17835492)
chr6 (394-466)||(21804536-21804607)
chr6 (378-445)||(27367427-27367494)
chr6 (378-445)||(27457774-27457841)
chr6 (362-448)||(7072213-7072299)
chr6 (460-502)||(28106014-28106056)
chr6 (461-502)||(3720327-3720368)
chr6 (421-466)||(8115072-8115117)
chr6 (380-425)||(12340035-12340080)
chr6 (399-432)||(16406798-16406831)
chr6 (399-447)||(4590610-4590658)
[»] scaffold0583 (1 HSPs)
scaffold0583 (339-466)||(2060-2187)
[»] scaffold0294 (1 HSPs)
scaffold0294 (356-467)||(17069-17180)
[»] scaffold0159 (2 HSPs)
scaffold0159 (339-466)||(33972-34099)
scaffold0159 (461-502)||(34106-34147)
[»] scaffold0302 (1 HSPs)
scaffold0302 (337-467)||(16132-16262)
[»] scaffold0095 (2 HSPs)
scaffold0095 (338-439)||(50266-50367)
scaffold0095 (385-415)||(22662-22692)
[»] scaffold1391 (1 HSPs)
scaffold1391 (338-466)||(1769-1897)
[»] scaffold0182 (1 HSPs)
scaffold0182 (339-466)||(20306-20433)
[»] scaffold0110 (1 HSPs)
scaffold0110 (337-464)||(1741-1868)
[»] scaffold0018 (1 HSPs)
scaffold0018 (339-466)||(135990-136117)
[»] scaffold0003 (3 HSPs)
scaffold0003 (344-445)||(39144-39245)
scaffold0003 (349-432)||(252492-252575)
scaffold0003 (460-500)||(252890-252930)
[»] scaffold0012 (1 HSPs)
scaffold0012 (367-466)||(105719-105818)
[»] scaffold0330 (1 HSPs)
scaffold0330 (350-466)||(5425-5541)
[»] scaffold0328 (1 HSPs)
scaffold0328 (343-466)||(7938-8061)
[»] scaffold0470 (1 HSPs)
scaffold0470 (356-431)||(1055-1130)
[»] scaffold0464 (1 HSPs)
scaffold0464 (361-437)||(6260-6336)
[»] scaffold0188 (1 HSPs)
scaffold0188 (350-446)||(6792-6888)
[»] scaffold1809 (1 HSPs)
scaffold1809 (399-466)||(697-764)
[»] scaffold0001 (1 HSPs)
scaffold0001 (387-441)||(143890-143944)
[»] scaffold0011 (1 HSPs)
scaffold0011 (388-440)||(14172-14224)


Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-118; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 129 - 344
Target Start/End: Original strand, 37711718 - 37711933
Alignment:
Q  129 ggaaagactacgattctgaagatattaggagggaaacatatggtggaacctgaaatggttcgtgttcttggaagatctgcttttcatgatactactttaa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37711718 ggaaagactacgattctgaagatattaggagggaaacatatggtggaacctgaaatggttcgtgttcttggaagatctgcttttcatgatactactttaa 37711817  T
Q  229 cttcttccggtgatctttgttatcttggtggtgaggttagtgcttgatttcattatccttatcaatgcacttatgccgtatttagcatgtggattagtat 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37711818 cttcttccggtgatctttgttatcttggtggtgaggttagtgcttgatttcattatccttatcaatgcacttatgccgtatttagcatgtggattagtat 37711917  T
Q  329 aaataaatcatactcc 344  Q
    ||||||||||||||||    
T  37711918 aaataaatcatactcc 37711933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 39864273 - 39864146
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||| |||||| ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  39864273 tactccctccgtctctaaattatagtcgtttaaagtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 39864174  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||||||||||||| ||||||||||    
T  39864173 actaaaatactcttattaattgtagtta 39864146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 26093556 - 26093429
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||| ||| |||||||||||| ||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||||||| || |||||    
T  26093556 tactccatctctctctaaataatggtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatatcattt 26093457  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    |||||||||  |||||| ||||||||||    
T  26093456 attaaaatatccttattaattgtagtta 26093429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 16395003 - 16395129
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||| | || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||    
T  16395003 tactccctccgtcttttaaaaatagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatagtaaaattagtatcattt 16395102  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| ||| || ||||||||||    
T  16395103 actaaaatac-ctttttaattgtagtta 16395129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 338 - 467
Target Start/End: Original strand, 6160414 - 6160543
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||| |||| |||||| ||||||||||| |||| |  || || |||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||    
T  6160414 ataccccctttgtctcaaaataatagtcgtttacgacttgtgtacgatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatt 6160513  T
Q  438 tattaaaatactcttatttattgtagttaa 467  Q
    || ||||||||||||||| |||||||||||    
T  6160514 tactaaaatactcttattaattgtagttaa 6160543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 356 - 467
Target Start/End: Complemental strand, 12039227 - 12039116
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||| ||| | |||||||||    
T  12039227 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaatacactcttatt 12039128  T
Q  456 tattgtagttaa 467  Q
     |||||||||||    
T  12039127 aattgtagttaa 12039116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 462
Target Start/End: Complemental strand, 28749153 - 28749030
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| | |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  28749153 tactccctccgtctcataatatttgtcatttaagatttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 28749054  T
Q  439 attaaaatactcttatttattgta 462  Q
    | ||||| || |||||| ||||||    
T  28749053 actaaaacacccttattaattgta 28749030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 49223942 - 49224069
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| ||||||||||||||||| |||||| || ||||||| ||| |||||||||||||||||||||||||||  ||  ||||||||||| |||||    
T  49223942 tactccctccgtctctaaataatagtcgtttaagattgatgcacggttactaagaaaatgattaattgtgttgattttgatggtaaaattagtatcattt 49224041  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  49224042 actaaaacacccttattaattgtagtta 49224069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 338 - 467
Target Start/End: Original strand, 31978607 - 31978736
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||||||| |||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||  |||||||| || || |    
T  31978607 atactccctccgtctctaaattatagtcgtttaaagtttgtgcacgattattaagaaaaagattaattgtgttgatttcaatggtaaaattaatatcact 31978706  T
Q  438 tattaaaatactcttatttattgtagttaa 467  Q
    || |||| || ||||||| ||| |||||||    
T  31978707 tactaaactattcttattaattatagttaa 31978736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 339 - 463
Target Start/End: Complemental strand, 31042959 - 31042835
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||    
T  31042959 tactccctccgtctcacaatattagtcatttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcattt 31042860  T
Q  439 attaaaatactcttatttattgtag 463  Q
    | |  ||||| |||||| |||||||    
T  31042859 actgtaatacccttattaattgtag 31042835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 32970522 - 32970650
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||||||| |||| |||||||| || |||||||||  |  ||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||    
T  32970522 atactccctctatctcaaaataatattcgtttaaggttcgtatacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatattatt 32970621  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || |||||||||| |||| ||||| ||||    
T  32970622 tactaaaatactcgtattaattgttgtta 32970650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 37506289 - 37506159
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattag---tagca 435  Q
    ||||||||| |||||||||||||| || ||||||||| ||||||| |||||||| ||||||||||||||||||||||  || ||||||||||   || ||    
T  37506289 tactccctccgtctctaaataataatcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatgataaaattagtactatca 37506190  T
Q  436 tttattaaaatactcttatttattgtagtta 466  Q
    |||| ||||| ||| ||||| ||||||||||    
T  37506189 tttactaaaacacttttattaattgtagtta 37506159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 351 - 466
Target Start/End: Complemental strand, 917174 - 917059
Alignment:
Q  351 ctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactc 450  Q
    |||||||| |||||| |||||||||| ||||||||||||||  |||||||||||| ||||||||| |||  |||||||| || |||||| |||||||| |    
T  917174 ctctaaattatagtcgtttaaggtttgtgcacgattattaaataaatgattaattatgttgatttaaatggtaaaattaatatcatttactaaaataccc 917075  T
Q  451 ttatttattgtagtta 466  Q
    ||||| ||||||||||    
T  917074 ttattaattgtagtta 917059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 356 - 466
Target Start/End: Complemental strand, 9307772 - 9307662
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||| | ||||||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||||| ||||| || ||| ||    
T  9307772 aatattagtcgtttaaggtttgtacacgattattaaggaaatgattaactgtgttgatttcaatgataaaattaatagcatttactaaaacacccttgtt 9307673  T
Q  456 tattgtagtta 466  Q
     ||||||||||    
T  9307672 aattgtagtta 9307662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 356 - 466
Target Start/End: Original strand, 23168966 - 23169076
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| ||||| |||| |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||| ||||| |  ||||||    
T  23168966 aatattagtcgtttaaagtttgtgcacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatccttatt 23169065  T
Q  456 tattgtagtta 466  Q
     ||| ||||||    
T  23169066 aattatagtta 23169076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 349 - 466
Target Start/End: Original strand, 33733229 - 33733345
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||| |||| |||||| ||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||  |||||||| || |||||| ||||||||    
T  33733229 gtctccaaattatagtcgtttaaagtttgtgcacgattattaaggaaatgatta-ttgtgttgatttcaatggtaaaattattaacatttactaaaatac 33733327  T
Q  449 tcttatttattgtagtta 466  Q
    | ||||| ||||||||||    
T  33733328 ttttattaattgtagtta 33733345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 34031481 - 34031610
Alignment:
Q  338 atactccctctgtctctaaataatagtca-tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcat 436  Q
    |||||||||| |||||||||| ||||||  |||||||||| |||| |||||||||| ||||||||| ||||||||||| ||||  |||||||| || |||    
T  34031481 atactccctccgtctctaaattatagtctgtttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggtaaaattaatatcat 34031580  T
Q  437 ttattaaaatactcttatttattgtagtta 466  Q
    ||| ||||||||  ||||| ||||||||||    
T  34031581 ttactaaaataccgttattaattgtagtta 34031610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 38787504 - 38787427
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  38787504 atactccccccgtctctaaataatagtcgtttaaggtttatgcacgattattaaggaaatgattgattgtgttgattt 38787427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 5179354 - 5179482
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||||||  ||||||||||| |||| |||||||||| | ||||||| |||| ||||||||||||||||||||||||||||  ||||| |||| ||||    
T  5179354 atactccctccatctctaaataacagtcgtttaaggtttgtacacgattcttaacaaaatgattaattgtgttgatttcaatagcaaaatgagtatcatt 5179453  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || |||| |  || |||| ||||||||||    
T  5179454 tactaaagttttcatattaattgtagtta 5179482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 7759342 - 7759250
Alignment:
Q  374 tttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||  | |||||| || |||||| ||||||||||||||| ||||||||||    
T  7759342 tttatgcacgattattaaaaaaataattaattgtgttgatttcaatggtgaaattaatatcatttactaaaatactcttattaattgtagtta 7759250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 342 - 466
Target Start/End: Original strand, 20209799 - 20209923
Alignment:
Q  342 tccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttatt 441  Q
    |||||| ||||||||||||||||| ||||| | | ||||||  ||||||||||||||||||||| |||||||||  ||| ||||||||||| |||||| |    
T  20209799 tccctccgtctctaaataatagtcgtttaaaggtgatgcaccgttattaagaaaatgattaattatgttgattttgatagtaaaattagtatcatttact 20209898  T
Q  442 aaaatactcttatttattgtagtta 466  Q
    |||| |  |||||| ||||||||||    
T  20209899 aaaacatccttattaattgtagtta 20209923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 339 - 467
Target Start/End: Original strand, 40144803 - 40144931
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||  |||||||||||||||| || ||| || ||||||  |||||||||||||||||||||||||||||||  ||  |||||||| || |||||    
T  40144803 tactccctcaatctctaaataatagtcgttcaagattgatgcacagttattaagaaaatgattaattgtgttgattttgatggtaaaattaatatcattt 40144902  T
Q  439 attaaaatactcttatttattgtagttaa 467  Q
    | ||||| || |||||| |||||||||||    
T  40144903 actaaaacacccttattaattgtagttaa 40144931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 15699275 - 15699157
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaa-tgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    ||||||||||||||||| ||||||||| ||||||  |||||||||||| |||||||||||||||||||  ||  |||||||| || |||||| ||||| |    
T  15699275 gtctctaaataatagtcgtttaaggttgatgcacagttattaagaaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaaca 15699176  T
Q  448 ctcttatttattgtagtta 466  Q
    | |||||| ||||||||||    
T  15699175 cccttattaattgtagtta 15699157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 367 - 500
Target Start/End: Complemental strand, 35538777 - 35538644
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||| |||||  || ||| |||||||||| ||||||||||||||||||||| |||||||   ||  ||||| |||||||  |||||| ||||||||||    
T  35538777 tttaagatttatttacaatttttaagaaaattattaattgtgttgatttcaatgataaaatggatattatttactaaaatatccttattaattgtagtta 35538678  T
Q  467 agttgaatgaaattcaatgaataatagtataata 500  Q
    ||||  |||||||||||| ||||||| |||||||    
T  35538677 agttagatgaaattcaataaataatattataata 35538644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 42410146 - 42410029
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||||||||||||||  ||||||||| ||||||| ||||||| |||||||||||||||||||||||  ||  |||||||| || |||||| ||||  ||    
T  42410146 gtctctaaataatagttgtttaaggttgatgcacggttattaaaaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaagcac 42410047  T
Q  449 tcttatttattgtagtta 466  Q
     |||||| ||||||||||    
T  42410046 ccttattaattgtagtta 42410029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 467
Target Start/End: Complemental strand, 45331492 - 45331375
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    |||||||||||||||| ||||||||| | ||||| ||||||||||||| ||||||| |||||||||  ||  |||||||| || |||||| ||||| ||     
T  45331492 tctctaaataatagtcgtttaaggttgacgcacggttattaagaaaataattaattatgttgattttgatggtaaaattaatatcatttactaaaacacc 45331393  T
Q  450 cttatttattgtagttaa 467  Q
    |||||| |||||||||||    
T  45331392 cttattaattgtagttaa 45331375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 24991609 - 24991736
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| ||||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||   |||||||| ||| ||||    
T  24991609 tactccctccgtctcacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattaatagtattt 24991708  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | || || ||  ||||| ||||||||||    
T  24991709 actacaacacctttattaattgtagtta 24991736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 429
Target Start/End: Complemental strand, 11450045 - 11449955
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaatta 429  Q
    |||||| || ||||||||||||||||  |||||||||| ||||||||||||||| ||||| |||||| |||||||||||||  ||||||||    
T  11450045 tactccttccgtctctaaataatagttgtttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggtaaaatta 11449955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 333 - 415
Target Start/End: Original strand, 13579571 - 13579653
Alignment:
Q  333 aaatcatactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||| ||||||| || |||||||| ||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  13579571 aaataatactccatccgtctctaagtaataatcatttaaggtttatgcatgattattaaagaaatgattaattgtgttgattt 13579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 51028491 - 51028577
Alignment:
Q  381 acgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    |||||| | ||| ||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| | ||||| |||||||||||    
T  51028491 acgattttcaaggaaacgattaattgtgttgattttaataataaagttagtagcatttattaaaatatttttattaattgtagttaa 51028577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 346 - 415
Target Start/End: Original strand, 30754904 - 30754973
Alignment:
Q  346 tctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    ||||||| ||||| |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  30754904 tctgtctttaaattatagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgattt 30754973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 447
Target Start/End: Complemental strand, 41080761 - 41080652
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| | |||||| |||||||||||  |||||||||||||| || | |||| ||||||||||||||||||||||| |||| |||||||  || ||||    
T  41080761 atactccatatgtctcaaaataatagtcgattaaggtttatgcatgaattttaaaaaaatgattaattgtgttgattttaatagtaaaatttatatcatt 41080662  T
Q  438 tattaaaata 447  Q
    |||| |||||    
T  41080661 tattgaaata 41080652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 41121778 - 41121908
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaa---gaaaatgattaattgtgttgatttcaataataaaattagtagca 435  Q
    |||||| || ||||||||||||||||  ||||||||||||||||  |||||||   | ||||||||||||||||||||||  ||  ||||||||| |  |    
T  41121778 tactccttccgtctctaaataatagttgtttaaggtttatgcacatttattaattaggaaatgattaattgtgttgattttgatggtaaaattagcataa 41121877  T
Q  436 tttattaaaatactcttatttattgtagtta 466  Q
    |||| |||||||| |||||| ||||||||||    
T  41121878 tttactaaaatacccttattaattgtagtta 41121908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 339 - 429
Target Start/End: Complemental strand, 27687404 - 27687313
Alignment:
Q  339 tactccctctgtctctaaataata-gtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaatta 429  Q
    ||||||||| |||||||||| ||| ||| |||||||||| ||||| |||||||| |||||||||| ||||||||||||||||  ||||||||    
T  27687404 tactccctccgtctctaaattataagtcttttaaggtttgtgcacaattattaaaaaaatgattagttgtgttgatttcaatggtaaaatta 27687313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 350 - 502
Target Start/End: Original strand, 35682773 - 35682925
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    |||| ||||||||||| | || ||||| ||||||||| ||||  ||| |||||||||||||||||||||| |||| ||||||| |||||||| ||||| |    
T  35682773 tctcaaaataatagtcgtata-ggtttgtgcacgatttttaacgaaaagattaattgtgttgatttcaatgataacattagtatcatttatt-aaataat 35682870  T
Q  450 cttatt--tattgtagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
     |||||  |   |||||||||||| |||||||||||| |||||  ||||||||||    
T  35682871 tttattactggagtagttaagttggatgaaattcaataaataagggtataatagt 35682925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 44707716 - 44707843
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||  |||||  |||| ||||| ||||| |||| |||||||||||||   |||||||||||| | ||||||||||| ||||||||||||| ||||    
T  44707716 tactcccttcgtctcataatattagtcgtttaaagtttttgcacgattattatagaaatgattaattatattgatttcaatgataaaattagtagtattt 44707815  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| ||  ||||| ||||||||||    
T  44707816 actaaaacacatttattaattgtagtta 44707843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 52429506 - 52429379
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||| ||  || |||||||||| ||||||||||| ||| ||||||||||||  ||||||| | ||  |||| ||| |  |||||    
T  52429506 tactccctccgtctctaaattattatcgtttaaggtttgtgcacgattatgaaggaaatgattaatttggttgattacgatggtaaatttaatgtcattt 52429407  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    |||||||||| |||||| ||||||||||    
T  52429406 attaaaatacccttattaattgtagtta 52429379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 466
Target Start/End: Original strand, 6023622 - 6023732
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| ||||| |||| ||| ||||||||| | ||||| ||||||||||||||||||||  |||| |||||||| |||| ||||||||  |||||    
T  6023622 aatattagtcgtttaatgtttgtgcgcgattattacggaaatgtttaattgtgttgatttcaatggtaaatttagtagcttttactaaaatacctttatt 6023721  T
Q  456 tattgtagtta 466  Q
     ||||||||||    
T  6023722 aattgtagtta 6023732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 6267822 - 6267920
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    ||||| ||||||||||| |||||||||| ||||| ||| ||||  |||||||||||||||||||||| ||| |||||| ||||| ||| || |||||||    
T  6267822 gtctcaaaataatagtcgtttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatgataaaactagtatcatgtactaaaata 6267920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 346 - 466
Target Start/End: Complemental strand, 36702074 - 36701956
Alignment:
Q  346 tctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    |||||||| |||||||||||  ||||||||| |||    || ||||| |||||||||||| |||||||||||||  ||||||||||| |||||| |||||    
T  36702074 tctgtctcaaaataatagtc--ttaaggtttttgcgaactttttaaggaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaa 36701977  T
Q  446 tactcttatttattgtagtta 466  Q
    | | |||||| ||||||||||    
T  36701976 tgcccttattaattgtagtta 36701956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 346 - 466
Target Start/End: Complemental strand, 36718178 - 36718060
Alignment:
Q  346 tctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    |||||||| |||||||||||  ||||||||| |||    || ||||| |||||||||||| |||||||||||||  ||||||||||| |||||| |||||    
T  36718178 tctgtctcaaaataatagtc--ttaaggtttttgcgaactttttaaggaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaa 36718081  T
Q  446 tactcttatttattgtagtta 466  Q
    | | |||||| ||||||||||    
T  36718080 tgcccttattaattgtagtta 36718060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 462
Target Start/End: Original strand, 32825963 - 32826070
Alignment:
Q  354 taaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactctta 453  Q
    |||||||||||| ||||||||| ||||||| |||||||| |||||||||| |||||||||||  ||  ||||||||||| |||||| ||||| ||  |||    
T  32825963 taaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaa-tgtgttgattttgatggtaaaattagtatcatttactaaaacaccttta 32826061  T
Q  454 tttattgta 462  Q
    || ||||||    
T  32826062 ttaattgta 32826070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 35367622 - 35367694
Alignment:
Q  361 tagtcatttaag-gtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||    
T  35367622 tagtcgtttaagcgtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 35367694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 37276588 - 37276496
Alignment:
Q  374 tttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||||||||||||| |||||||||| |||||||||||  ||  ||||||||||| | |||| ||||| || |||||| ||||||||||    
T  37276588 tttatgcacgattattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcgtttactaaaacacccttattaattgtagtta 37276496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 343 - 466
Target Start/End: Complemental strand, 2572626 - 2572504
Alignment:
Q  343 ccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttatta 442  Q
    ||||| |||| ||||| |||||| ||||| |||| || ||||||||||| | ||||||||||||| |||||||||||  |||||||| || |||||| |     
T  2572626 ccctccgtctttaaattatagtcgtttaaagtttgtgtacgattattaaaataatgattaattgtattgatttcaatggtaaaattaatatcatttact- 2572528  T
Q  443 aaatactcttatttattgtagtta 466  Q
    ||||||  ||||| ||||||||||    
T  2572527 aaatacaattattaattgtagtta 2572504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 12151310 - 12151211
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| || | |||||||||| | || ||||||| ||||||||||||| |||||||||||| |||||| ||||||| | | ||| ||||||||||    
T  12151310 tttaaggtttgtgtatgattattaaggagattattaattatgttgatttcaatgataaaattagtatcatttactaaaatattgtaattaattgtagtta 12151211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 14757610 - 14757677
Alignment:
Q  399 attaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||||||||||||||  |||||||||||| |||||| ||||| ||||||||| ||||||||||    
T  14757610 attaattgtgttgatttcaacgataaaattagtaacatttactaaaacactcttattaattgtagtta 14757677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 467
Target Start/End: Original strand, 17988534 - 17988644
Alignment:
Q  359 aatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattag--tagcatttattaaaatactcttattt 456  Q
    |||||||||||||||||| |   || || |||||||  |||||||||||||||||||||||  |||||||||  ||  ||||| |||||||||||||||     
T  17988534 aatagtcatttaaggtttgttggcggtttttaagaatgtgattaattgtgttgatttcaatgttaaaattagtatattatttactaaaatactcttatta 17988633  T
Q  457 attgtagttaa 467  Q
    |||||||||||    
T  17988634 attgtagttaa 17988644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 43500762 - 43500816
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  43500762 tagtcgtttaaggtttatgcacgattattaaggaaattattaattgtgttgattt 43500816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 447
Target Start/End: Complemental strand, 6365738 - 6365685
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  6365738 aaatgattaattgtgttgatttcaataatcaaattagtattatttattaaaata 6365685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 21909990 - 21910055
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||  ||  |||||||||||    
T  21909990 tttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagta 21910055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 466
Target Start/End: Complemental strand, 24881008 - 24880911
Alignment:
Q  369 taaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||| ||||  ||||||| | |||||||| ||| |||||||||||||  |||||||| || |||||| ||||||||| ||||| ||||||||||    
T  24881008 taaggtttgtgcataattattacggaaatgattgattatgttgatttcaatggtaaaattaatatcatttactaaaatacttttattaattgtagtta 24880911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 419
Target Start/End: Complemental strand, 4659891 - 4659839
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaat 419  Q
    |||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  4659891 tttagggtttatgcatgaatattaagaaaatgattaattgtgttgatttcaat 4659839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 462
Target Start/End: Complemental strand, 10496003 - 10495878
Alignment:
Q  339 tactccctctgtctctaaataatagtcatt---taaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagca 435  Q
    |||||||||| ||||||||||||| | |||   ||||||||||| | ||||||||| ||||| ||||||| |||||||||  ||  ||||||||||| ||    
T  10496003 tactccctctatctctaaataatactaattgtttaaggtttatgtaagattattaaaaaaattattaattttgttgattttgatggtaaaattagtatca 10495904  T
Q  436 tttattaaaatactcttatttattgta 462  Q
    |||| ||||| ||| ||||| ||||||    
T  10495903 tttactaaaacact-ttattaattgta 10495878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 375 - 467
Target Start/End: Complemental strand, 22181462 - 22181370
Alignment:
Q  375 ttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    ||||||||| |||||||| ||||||||| ||| ||| ||||||||  |||||||| || |||||| ||||| || |||| |||||||||||||    
T  22181462 ttatgcacggttattaaggaaatgattagttgagttcatttcaatggtaaaattaatatcatttactaaaacacccttagttattgtagttaa 22181370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 8896337 - 8896415
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||| |||||||||||||||||  |||||||| || |||||| |||||||   ||||| ||||||||||    
T  8896337 ttaagaaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatatatttattaattgtagtta 8896415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 3260738 - 3260655
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaaga-aaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||||||||||||||| |||||| ||| || | |||| || | | ||||||||| ||||||||||||||||||||||| |||||    
T  3260738 tctctaaataatagtcgtttaagatttgtgtatgattttttaaagaaatgattagttgtgttgatttcaataataaaagtagta 3260655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 9379358 - 9379267
Alignment:
Q  375 ttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||| ||| ||||  ||||||||||||||  |||||| ||| ||||||||| || ||||||||||||||   ||||| ||||||||||    
T  9379358 ttatgcacaatttttaaagaaatgattaattgtaatgattttaatgataaaattaatatcatttattaaaatatatttattaattgtagtta 9379267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 431
Target Start/End: Original strand, 7439881 - 7439963
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagt 431  Q
    ||||| ||||||||||| |||||||||| ||||||||| |||  |||||||||||  ||||  ||||||||  ||||||||||    
T  7439881 gtctcaaaataatagtcgtttaaggtttttgcacgatttttagaaaaatgattaaccgtgtcaatttcaatggtaaaattagt 7439963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 27897083 - 27896990
Alignment:
Q  373 gtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||| |||| |||| ||||| |||| |||||  |||||||||| ||| ||||||||||||  |||||| |||||| ||||||| ||| ||||||    
T  27897083 gtttgtgcatgatttttaaggaaataattaaacgtgttgattttaatgataaaattagtataatttatcaaaatattcttattaattatagtta 27896990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 355 - 432
Target Start/End: Complemental strand, 31154273 - 31154197
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||||||||| |||||| || |  | |||||| |||| ||||||||||||||||||||||| ||| ||||||||||||    
T  31154273 aaataatagttatttaaagtcttagtacgatt-ttaataaaatgattaattgtgttgattttaatgataaaattagta 31154197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 3312218 - 3312146
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||||| ||| || ||||||||| |||||| || |||| |  |||| ||||||||||    
T  3312218 aaatgattaattgtgttgattttaatgattaaattagtatcatttactataatattgatattaattgtagtta 3312146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 427
Target Start/End: Original strand, 978862 - 978901
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaat 427  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  978862 ttaagaaaatgattagttgtgttgatttcaatgataaaat 978901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 7352450 - 7352380
Alignment:
Q  338 atactccctctgtctctaaataatagtca-tttaaggtttatgcacgattattaagaaaatgattaattgt 407  Q
    |||||| |||||||||||||||||| ||  |||||||||| || |  ||| ||||||||||||||||||||    
T  7352450 atactcgctctgtctctaaataatattccgtttaaggtttgtgtattatttttaagaaaatgattaattgt 7352380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 26252504 - 26252558
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgtt 410  Q
    |||| ||||| ||||| |||| |||| ||||||||| ||||||||||||||||||    
T  26252504 aatagtagtcgtttaaagtttttgcatgattattaaaaaaatgattaattgtgtt 26252558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 415
Target Start/End: Complemental strand, 34332476 - 34332422
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    ||||| |||||||||| || | |||| |||||||||| |||||||||||||||||    
T  34332476 tagtcttttaaggtttctgtaagatttttaagaaaataattaattgtgttgattt 34332422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 420
Target Start/End: Original strand, 26255980 - 26256033
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaata 420  Q
    ||||||||||||||||||| ||| |  |||||||||||| ||||||||| ||||    
T  26255980 tttaaggtttatgcacgatcatttatgaaatgattaattatgttgattttaata 26256033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 29074997 - 29074940
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    |||| |||||||||| |||||||||||| |||  |||||||| || ||||||||||||    
T  29074997 ttaaaaaaatgattagttgtgttgattttaatggtaaaattaatatcatttattaaaa 29074940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 44761498 - 44761595
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    ||||||||| ||| || ||||  |||| || | ||||| ||| ||||||||||||| |||| |||| ||| ||||||||| || |||||| |||||||    
T  44761498 tctctaaattataatcgtttagagtttgtgtatgattaataaaaaaatgattaattatgttaattttaatgataaaattaatatcatttactaaaata 44761595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 43614510 - 43614450
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||| |||||||||| ||||||||||| |||  ||||||||||| |||| | ||||||||    
T  43614510 ttaaggaaatgattaagtgtgttgattttaatggtaaaattagtatcattgactaaaatac 43614450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 359 - 561
Target Start/End: Original strand, 43115773 - 43115987
Alignment:
Q  359 aatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttat 458  Q
    ||||||| ||||| |||| ||| ||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  43115773 aatagtcgtttaaagtttgtgcgcgattattaaagaaatgattaattgtgttgatttcaatgataaagttagtagcatttactaaaatactcttatttat 43115872  T
Q  459 t------------gtagttaagttgaatgaaattcaatgaataatagtataatagtagnnnnnnntaataaatgctaccctaatattgtaaagtgatact 546  Q
    |            |||||||||||||||||||||||| ||||||| |||||||| | |       |||||||||||||  | ||||||||||||||||||    
T  43115873 tgtagttagtggagtagttaagttgaatgaaattcaacgaataatggtataataatggaaaaaaataataaatgctacattgatattgtaaagtgatact 43115972  T
Q  547 aattattttaagaag 561  Q
    |||||||||||||||    
T  43115973 aattattttaagaag 43115987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 39691642 - 39691525
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||| ||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| ||||||||    
T  39691642 gtctctaaattataatcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaatac 39691543  T
Q  449 tcttatttattgtagtta 466  Q
    ||||||| |||| |||||    
T  39691542 tcttattaattgcagtta 39691525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 37322581 - 37322463
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaag-aaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    |||||||||| |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||||| || ||||||||||||||    
T  37322581 gtctctaaattatagtcgtttaaggtttatgcacgattattaaggaaaatgattgattgtgttgatttcaatggtaaaattaatatcatttattaaaata 37322482  T
Q  448 ctcttatttattgtagtta 466  Q
    | |||||| ||||||||||    
T  37322481 cccttattaattgtagtta 37322463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 16463852 - 16463724
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||  ||  ||||||||||| ||||    
T  16463852 atactccccccgtctctaaataatagtcgtttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 16463753  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| || |||||| ||||||||||    
T  16463752 tactaaaacacccttattaattgtagtta 16463724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 344 - 467
Target Start/End: Complemental strand, 45235738 - 45235615
Alignment:
Q  344 cctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaa 443  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||||||  |||||||| || |||||| |||    
T  45235738 cctccgtctctaaataatagtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaa 45235639  T
Q  444 aatactcttatttattgtagttaa 467  Q
    || || |||||| |||||||||||    
T  45235638 aacacccttattaattgtagttaa 45235615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 36354393 - 36354521
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |||||| || ||||||||||||  ||  |||||||||||  |||    
T  36354393 atactccatccgtctctaaataatagtcatttaaggtttatgtacgattattaaggaaatgactagttgtgttgattttgatggtaaaattagtattatt 36354492  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    |||| ||| ||||||||| ||||||||||    
T  36354493 tattgaaacactcttattaattgtagtta 36354521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 5789599 - 5789726
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||| |||| |||||  |||| |||||||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||| |||||||||| ||||||    
T  5789599 tacttcctccgtctcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcattt 5789698  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  5789699 actaaaacacccttattaattgtagtta 5789726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 338 - 467
Target Start/End: Complemental strand, 39785751 - 39785619
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattag---tagc 434  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||  ||  |||||||||   || |    
T  39785751 atactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtactatc 39785652  T
Q  435 atttattaaaatactcttatttattgtagttaa 467  Q
    ||||| ||||| ||||||||| |||||||||||    
T  39785651 atttactaaaacactcttattaattgtagttaa 39785619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 349 - 467
Target Start/End: Complemental strand, 43410578 - 43410460
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||| |||||| ||||| |||| ||||||||||||||| |||| ||||||||||||||| ||||| ||||||||| || |||||| |||||||     
T  43410578 gtctctaaattatagtcctttaatgtttgtgcacgattattaaggaaattattaattgtgttgatatcaatgataaaattaatatcatttactaaaatat 43410479  T
Q  449 tcttatttattgtagttaa 467  Q
     |||||| |||||||||||    
T  43410478 ccttattaattgtagttaa 43410460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 349 - 466
Target Start/End: Original strand, 15359048 - 15359165
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||| |||||||||||| ||||||||| ||||||| |||||||||| ||||||||||||||||||||  || ||||||||| || |||||| ||||| ||    
T  15359048 gtctttaaataatagtcgtttaaggttgatgcacggttattaagaagatgattaattgtgttgattttgatgataaaattaatatcatttactaaaacac 15359147  T
Q  449 tcttatttattgtagtta 466  Q
     |||||| ||||||||||    
T  15359148 ccttattaattgtagtta 15359165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 16806015 - 16805916
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| |||| ||||||||||| |||||| |||||||  |||||| ||||||||||    
T  16806015 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattgtagtta 16805916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 16845296 - 16845197
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| |||| ||||||||||| |||||| |||||||  |||||| ||||||||||    
T  16845296 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattgtagtta 16845197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 355 - 448
Target Start/End: Complemental strand, 19937823 - 19937730
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||| || |||||| ||||||||    
T  19937823 aaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaatac 19937730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 374 - 467
Target Start/End: Original strand, 41220932 - 41221025
Alignment:
Q  374 tttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    |||||| |||||| |||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||| | ||||| |||||||||||    
T  41220932 tttatgtacgatttttaaaaacatgattaattgtgttgatttcaattataaaattagtatcatttattaaaatatttttattaattgtagttaa 41221025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 342 - 466
Target Start/End: Original strand, 14523326 - 14523450
Alignment:
Q  342 tccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttatt 441  Q
    |||||| ||||||||| ||||||| ||||| ||||||||| | |||||||| ||||||||  ||||||||||||||||  |||||||| || |||||| |    
T  14523326 tccctccgtctctaaaaaatagtcgtttaaagtttatgcaaggttattaaggaaatgattttttgtgttgatttcaatggtaaaattaatatcatttact 14523425  T
Q  442 aaaatactcttatttattgtagtta 466  Q
    ||||||  |||||| ||||||||||    
T  14523426 aaaatatccttattaattgtagtta 14523450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 393 - 500
Target Start/End: Original strand, 1206708 - 1206815
Alignment:
Q  393 aaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaagttgaatgaaattcaatgaataata 492  Q
    ||||||||||||| ||||||||||| |  ||||||||||| |||||| |||||||  |||||| ||||||||||||||| |||||||||||| ||||  |    
T  1206708 aaaatgattaattatgttgatttcagtggtaaaattagtaacatttactaaaatatccttattaattgtagttaagttggatgaaattcaataaatatga 1206807  T
Q  493 gtataata 500  Q
    ||||||||    
T  1206808 gtataata 1206815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 356 - 443
Target Start/End: Original strand, 3323254 - 3323341
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaa 443  Q
    |||| ||||| |||||||||| |||||||||||||  |||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  3323254 aatattagtcgtttaaggtttgtgcacgattattataaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttattaa 3323341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 25637642 - 25637516
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||| || ||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||||  ||  ||||||||||  |||||    
T  25637642 tactccatccgtctctaaataatagttgtttaaggtttatgcacgatta-taaggaaatgattaattgtgttgattttgatggtaaaattagtgtcattt 25637544  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| ||  ||||| ||||||||||    
T  25637543 actaaaacacctttattaattgtagtta 25637516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 32783515 - 32783420
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||  ||| |||||||| || |||||| |||||    
T  32783515 tctctaaataataatcatttaaggttgatgcacggttattaagaaaatgattaattgtgtttattttgatagtaaaattaatatcatttactaaaa 32783420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 26607918 - 26608008
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaatt 428  Q
    ||||||||||  ||||||||| ||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  26607918 atactccctccttctctaaattataatagtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 35314011 - 35313922
Alignment:
Q  377 atgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||| ||||||||||||||||||||||||||  |||||||||||| ||||||||||  |  |||||| ||||||||||    
T  35314011 atgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagtatttattaaagcaaccttattaattgtagtta 35313922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 384 - 448
Target Start/End: Original strand, 43699595 - 43699659
Alignment:
Q  384 attattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  43699595 attattaagaaaatgattaactgtgttgatttcaatagtaaaattagtatcatttattaaaatac 43699659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 17695492 - 17695365
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||| || ||||| |||| ||| || |||||||||| ||||||||||||||| |||||||||||||| |||||||||||  |||||||  || |||||    
T  17695492 tactccatccgtctcaaaattataatcgtttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattgatatcattt 17695393  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    |  |||||| ||||||| ||| ||||||    
T  17695392 acaaaaatattcttattaattatagtta 17695365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 346 - 447
Target Start/End: Original strand, 10005083 - 10005183
Alignment:
Q  346 tctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    |||||||| |||||| |||| |||||||||| |||||  |||| ||||||||||| ||||||||||||||||  ||||||||||||| |||||| |||||    
T  10005083 tctgtctcaaaataacagtcgtttaaggtttgtgcacatttat-aagaaaatgatcaattgtgttgatttcagcaataaaattagtatcatttactaaaa 10005181  T
Q  446 ta 447  Q
    ||    
T  10005182 ta 10005183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 36794447 - 36794319
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||| ||| ||||||||||||||||| |||||| || ||||| | |||||||| ||||||||||||||||||||||  ||  ||||||||||| | ||    
T  36794447 atactctctccgtctctaaataatagtcgtttaagattgatgcatggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcttt 36794348  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || |||||  | |||||| | ||||||||    
T  36794347 tactaaaacgcccttattaactgtagtta 36794319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 8947003 - 8947130
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||| ||||  |||| || || ||||| |||| ||||  ||||||||| |||||||||||||||||||||||||| ||||||||||||  ||||    
T  8947003 tactccctctatctcacaatattaatcgtttaaagtttgtgcataattattaaggaaatgattaattgtgttgatttcaatgataaaattagtaatattt 8947102  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| |  |||||| ||| ||||||    
T  8947103 actaaaacatccttattaattatagtta 8947130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 344 - 415
Target Start/End: Original strand, 34120395 - 34120466
Alignment:
Q  344 cctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||| ||||||||||||||  | ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  34120395 cctccgtctctaaataataaccgtttaaagtttatgcatgattattaagaaaatgattaattgtgttgattt 34120466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 466
Target Start/End: Original strand, 39329652 - 39329742
Alignment:
Q  378 tgcacgattattaagaaaatgattaattgtgt--tgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||  |||||||||||| ||||||||  |||||||||| ||||||||| ||||||||| ||||| ||||||||| ||||||||||    
T  39329652 tgcacgatttctaagaaaatgatcaattgtgtattgatttcaatgataaaattaatagcatttactaaaacactcttattaattgtagtta 39329742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 356 - 425
Target Start/End: Complemental strand, 39443858 - 39443789
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaa 425  Q
    |||| ||||| |||||||||| ||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  39443858 aatattagtcgtttaaggtttgtgcacaattattaagaaaatgattaattttgttgatttcaatagtaaa 39443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 16377635 - 16377734
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||| ||| ||||||||||||||  ||||||||||||||||||||| ||||  |||||||| || ||||||  ||||||  |||||| ||||||||||    
T  16377635 tttaagatttgtgcacgattattaaagaaatgattaattgtgttgattacaatggtaaaattaatatcatttaccaaaataaccttattaattgtagtta 16377734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 31448665 - 31448720
Alignment:
Q  360 atagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  31448665 atagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattt 31448720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 407
Target Start/End: Original strand, 5272155 - 5272212
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgt 407  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||| |||||||||    
T  5272155 tctctaaataatagtcgtttaaggtttacgcacgattattaaggaaataattaattgt 5272212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 34225724 - 34225624
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| ||||||||||||||| |||||| ||||| | ||||||| |||  |||| ||||||  ||||| ||||| || |||||| ||||||||||    
T  34225724 tttaaggtttgtgcacgattattaaggaaatgaataattatattgattttaatggtaaacttagtattatttactaaaacacccttattaattgtagtta 34225625  T
Q  467 a 467  Q
    |    
T  34225624 a 34225624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 466
Target Start/End: Original strand, 18853167 - 18853279
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataa--aattagtagcatttattaaaatactctt 452  Q
    ||||||||||| |||||  ||| ||||||||  ||||| |||| ||||||||||||||||||||| ||||  |||| ||| ||||||  |||||||||||    
T  18853167 aaataatagtcgtttaaaatttgtgcacgatctttaaggaaataattaattgtgttgatttcaatgataattaatt-gtatcatttaccaaaatactctt 18853265  T
Q  453 atttattgtagtta 466  Q
    |||  |||||||||    
T  18853266 attagttgtagtta 18853279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 17346356 - 17346440
Alignment:
Q  381 acgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||  |||| ||||||| | |||||||||| | |||||||| || |||||||||||||| | ||||| ||||||||||    
T  17346356 acgattattaaagaaat-attaattattttgatttcaaaagtaaaattaatatcatttattaaaatatttttattaattgtagtta 17346440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 27501517 - 27501582
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||||||||| || | |||||||||| ||||||| |||| |||||||||||||  |||||||||||    
T  27501517 tttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggtaaaattagta 27501582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 467
Target Start/End: Complemental strand, 27866614 - 27866526
Alignment:
Q  378 tgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    ||||||||| ||||| |||||||||||  ||||||||| ||| ||||||||| || | |||| |||||||  |||||| |||||||||||    
T  27866614 tgcacgatttttaaggaaatgattaataatgttgattttaatgataaaattaatatc-tttagtaaaatatccttattaattgtagttaa 27866526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 36173351 - 36173408
Alignment:
Q  397 tgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttat 454  Q
    ||||||||| ||||||||| | | ||||||||| || |||||||||||||||||||||    
T  36173351 tgattaattttgttgattttagtgataaaattaatatcatttattaaaatactcttat 36173408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 11742497 - 11742556
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||| ||||| ||||| ||||||||||||||||||||||| |  |||||||| |||||||    
T  11742497 aatattagtcgtttaacgtttatgcacgattattaagaaattttttaattgtattgattt 11742556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 15435494 - 15435447
Alignment:
Q  378 tgcacgattattaagaaaatgattaattgtgttgatttcaataataaa 425  Q
    |||| |||| |||||||||| ||||||||||||||||||||| |||||    
T  15435494 tgcatgatttttaagaaaataattaattgtgttgatttcaatgataaa 15435447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 19426563 - 19426492
Alignment:
Q  394 aaatgattaattgtgttga-tttcaataataaaattagtagcatttattaaaatactcttatttattgtagt 464  Q
    ||||||||||||||||||| ||||||| |||||||||| | |||||| |||||||   ||||| ||||||||    
T  19426563 aaatgattaattgtgttgattttcaatgataaaattagcaacatttactaaaatatcattattaattgtagt 19426492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 439
Target Start/End: Original strand, 28170567 - 28170634
Alignment:
Q  372 ggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattta 439  Q
    ||||| ||||||| |||| | ||||||||||||| ||||||||||||   |||||||||| |||||||    
T  28170567 ggtttgtgcacgagtatttaaaaaatgattaattatgttgatttcaagggtaaaattagttgcattta 28170634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 33729909 - 33729956
Alignment:
Q  380 cacgattattaagaaaatgattaattgtgttgatttcaataataaaat 427  Q
    |||| |||||||||||||||||| | |||||||||||||| |||||||    
T  33729909 cacggttattaagaaaatgattattagtgttgatttcaatcataaaat 33729956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 502
Target Start/End: Original strand, 7438936 - 7438978
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    ||||||||||||||||||||||||| |||||  ||||||||||    
T  7438936 gtagttaagttgaatgaaattcaataaataagggtataatagt 7438978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 502
Target Start/End: Original strand, 35242381 - 35242423
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    |||||||||||| |||||||||||| ||||| |||||||||||    
T  35242381 gtagttaagttggatgaaattcaataaataaaagtataatagt 35242423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 502
Target Start/End: Original strand, 5789733 - 5789774
Alignment:
Q  461 tagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  5789733 tagttaagttggatgaaattcaataaataatggtataatagt 5789774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 376
Target Start/End: Complemental strand, 30544445 - 30544408
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggttt 376  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  30544445 tactccctccgtctctaaataatagtcgtttaaggttt 30544408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 31976464 - 31976383
Alignment:
Q  385 ttattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||| ||||||||| | ||||||||||||||| ||||||  ||  |||||| ||||| ||||||| | ||| ||||||    
T  31976464 ttattaaggaaatgattagtagtgttgatttcaatagtaaaatatgtttcatttactaaaacactcttaataattatagtta 31976383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 466
Target Start/End: Original strand, 35242278 - 35242375
Alignment:
Q  369 taaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||| ||||||||| ||| ||||| | ||| |||||||||||||||| |||  ||||||||| | |||||| || ||||   ||||| ||||||||||    
T  35242278 taagatttatgcacaatttttaaggagatgtttaattgtgttgattttaatgttaaaattagaatcatttactagaatatatttattaattgtagtta 35242375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 500
Target Start/End: Original strand, 36354527 - 36354567
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataata 500  Q
    |||||||||||| |||||||||||| |||||| ||||||||    
T  36354527 gtagttaagttggatgaaattcaataaataatggtataata 36354567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 8e-41; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 337 - 466
Target Start/End: Original strand, 7827875 - 7828004
Alignment:
Q  337 catactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcat 436  Q
    ||||||||||| |||||||||||||| || |||||||||| | |||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||    
T  7827875 catactccctccgtctctaaataataatcgtttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtatcat 7827974  T
Q  437 ttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||| |||||| ||||||||||    
T  7827975 ttattaaaatacccttattaattgtagtta 7828004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 361 - 504
Target Start/End: Original strand, 2232046 - 2232197
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttatt- 459  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||| ||||||||| |||     
T  2232046 tagtcgtttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggtaaaattagtagcatttattaaaaaactcttattaattt 2232145  T
Q  460 -------gtagttaagttgaatgaaattcaatgaataatagtataatagtag 504  Q
           |||||||||||| |||||||||||| |||||  ||||||||||||    
T  2232146 tagtggagtagttaagttggatgaaattcaataaataagggtataatagtag 2232197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 40530175 - 40530302
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| | ||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  40530175 tactccctccgtctcacaatatttgtcgtttaaggtctgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 40530274  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  40530275 actaaaacacccttattaattgtagtta 40530302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 40900080 - 40899953
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||  ||   |||||||||| |||||    
T  40900080 tactctctctatctctaaataatagtcatttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggcaaaattagtatcattt 40899981  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  40899980 actaaaacacccttattaattgtagtta 40899953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 27542947 - 27542830
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||| || ||| |||||||||| ||||||||||||||| |||||||| |||||||||||||||||  |||||||| || |||||| ||||||||    
T  27542947 gtctctaaattattgtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaataccatttactaaaatac 27542848  T
Q  449 tcttatttattgtagtta 466  Q
    ||||||| ||||||||||    
T  27542847 tcttattaattgtagtta 27542830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 4818713 - 4818586
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| | ||| |||||||||| ||||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||    
T  4818713 tactccctccgtctcacaatatttgtcgtttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaattgtaaaattagtagcattt 4818614  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  4818613 actaaaacacccttattaattgtagtta 4818586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 38508138 - 38508265
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||| || ||||| ||||||||||| |||||| ||| ||| ||||| ||||||||||||||||||||||| ||||||||  ||||||||||| || |     
T  38508138 tactccatccgtctcaaaataatagtcgtttaagatttgtgctcgatttttaagaaaatgattaattgtgttaatttcaatggtaaaattagtatcactc 38508237  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    ||||||||||||||||| ||||||||||    
T  38508238 attaaaatactcttattaattgtagtta 38508265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 345 - 466
Target Start/End: Complemental strand, 21060786 - 21060665
Alignment:
Q  345 ctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaa 444  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||| | ||||||||||||||||| ||||  ||  |||||||||||  ||||| ||||    
T  21060786 ctctgtttctaaataatagtcgtttaaggtttatgcacggttattagggaaatgattaattgtgtttattttgatggtaaaattagtattatttactaaa 21060687  T
Q  445 atactcttatttattgtagtta 466  Q
    ||||||||||| ||||||||||    
T  21060686 atactcttattaattgtagtta 21060665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 358 - 466
Target Start/End: Original strand, 6753629 - 6753736
Alignment:
Q  358 taatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttattta 457  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| | || ||||||||  ||||||||||| |||||| |||||||| |||||| |    
T  6753629 taatagtcgtttaaggtttatgcacgattattaagaaaatgattaatt-tattaatttcaatggtaaaattagtatcatttactaaaatacccttattaa 6753727  T
Q  458 ttgtagtta 466  Q
    |||||||||    
T  6753728 ttgtagtta 6753736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 6315728 - 6315855
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||| |||||| ||||||| || | | ||||||||||| |||||||| |||||||| |||||||| ||||||||| || |||||    
T  6315728 tactccctccgtctctaaattatagtcgtttaagggttgtactcgattattaaggaaatgattgattgtgttaatttcaatgataaaattaatatcattt 6315827  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| |||||| ||||||||||    
T  6315828 actaaaatacccttattaattgtagtta 6315855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 339 - 455
Target Start/End: Original strand, 30512636 - 30512752
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||| |||||| | ||| |||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||  | |||||    
T  30512636 tactccctccgtctctaaattatagtcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcattt 30512735  T
Q  439 attaaaatactcttatt 455  Q
    | ||| |||||||||||    
T  30512736 actaagatactcttatt 30512752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 339 - 455
Target Start/End: Original strand, 30552976 - 30553092
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||| |||||| | ||| |||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||  | |||||    
T  30552976 tactccctccgtctctaaattatagtcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcattt 30553075  T
Q  439 attaaaatactcttatt 455  Q
    | ||| |||||||||||    
T  30553076 actaagatactcttatt 30553092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 339 - 462
Target Start/End: Complemental strand, 32440303 - 32440180
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| ||||| ||||||||||| || ||||||| |||| |||| ||||  ||||||||||||||||| |||||||| ||||||||| || |||||    
T  32440303 tactccctccgtctcaaaataatagtcgttaaaggtttgtgcatgatttttaaagaaatgattaattgtgttaatttcaatgataaaattaatatcattt 32440204  T
Q  439 attaaaatactcttatttattgta 462  Q
    | |||||||| |||||| ||||||    
T  32440203 actaaaatacccttattaattgta 32440180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 356 - 445
Target Start/End: Complemental strand, 9515891 - 9515802
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    |||| ||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||| |||||    
T  9515891 aatattagtcgtttaaggtttgtgcacgattattaagataatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaa 9515802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 11904349 - 11904241
Alignment:
Q  358 taatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttattt- 456  Q
    |||||||| ||||| |||| ||||||||  |||||||| ||||||||||| |||| |||||||||||||||| || |||||| ||||||||||||||||     
T  11904349 taatagtcgtttaatgtttgtgcacgatctttaagaaagtgattaattgtattgagttcaataataaaattaatatcatttactaaaatactcttattta 11904250  T
Q  457 attgtagtt 465  Q
    |||||||||    
T  11904249 attgtagtt 11904241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 338 - 429
Target Start/End: Complemental strand, 843600 - 843509
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaatta 429  Q
    |||||||||| |||||  ||||||| |  |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  843600 atactccctccgtctcacaataataattgtttaaggtttgtgcacgattattaagaaaatgattaattttgttgatttcaatgataaaatta 843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 8698443 - 8698344
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||||||  |||||||||| |||||||  |||| || |||||| ||||||||||    
T  8698443 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattagttgcatttaccaaaacacccttattaattgtagtta 8698344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 8724988 - 8725087
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||||||  |||||||| || |||||| ||||| || |||||| ||||||||||    
T  8724988 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacacttattaattgtagtta 8725087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 15818453 - 15818528
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcat 436  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||    
T  15818453 tagtcgtttaaggtttatgcacgattattaaggaaatgtttaattgtgttgatttcaatggtaaaattagtagcat 15818528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 352 - 466
Target Start/End: Complemental strand, 27580749 - 27580635
Alignment:
Q  352 tctaaataatagtcatttaaggtttatgcacgatta-ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactc 450  Q
    ||||||| |||||| |||||||||| |||||||||| || || ||||||||||||||||||||||||||  |||||||| || |||||| |||||||| |    
T  27580749 tctaaattatagtc-tttaaggtttctgcacgattaatttaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaataccc 27580651  T
Q  451 ttatttattgtagtta 466  Q
    ||||| ||||||||||    
T  27580650 ttattaattgtagtta 27580635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 328 - 466
Target Start/End: Original strand, 1248544 - 1248682
Alignment:
Q  328 taaataaatcatactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaat 427  Q
    |||||| || ||||| | || |||| |||| ||||||| |||||| ||| |||||| |||||||| |||| ||||||| |||||||||||||  ||||||    
T  1248544 taaatagatgatacttcatccgtctttaaaaaatagtcgtttaagatttgtgcacggttattaaggaaattattaattatgttgatttcaatggtaaaat 1248643  T
Q  428 tagtagcatttattaaaatactcttatttattgtagtta 466  Q
    || || |||||| |||||||| |||||| ||||||||||    
T  1248644 taatatcatttactaaaatacccttattaattgtagtta 1248682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 356 - 466
Target Start/End: Complemental strand, 29374487 - 29374377
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| ||||||||||||  | | ||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||| ||  |||||    
T  29374487 aatattagtcgtttaaggtttatttaaggttattaagaaaatgattaattatgttgatttcaatgataaaattaatagcatttactaaaagacctttatt 29374388  T
Q  456 tattgtagtta 466  Q
     ||||||||||    
T  29374387 aattgtagtta 29374377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 2588019 - 2588112
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||  |||||||| ||||||||||||||||||||||  ||  |||||||||||    
T  2588019 tactccctccgtctctaaataatagtcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 2588112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 369 - 466
Target Start/End: Complemental strand, 6754160 - 6754064
Alignment:
Q  369 taaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||||||| |||||||| |  |||||| ||||| ||||||||| ||||||||||    
T  6754160 taaggtttatgcactattaataagaaaatgattaatt-tgttgatttcaatagtaaaattaatgtcatttactaaaacactcttattaattgtagtta 6754064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 447
Target Start/End: Complemental strand, 41478989 - 41478881
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||| |||| |||||||||||||||| | |||||||| ||| ||||| ||||||||||||||||||||| | ||||||||  ||||||||||  |||||    
T  41478989 tactctctctatctctaaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgtcattt 41478890  T
Q  439 attaaaata 447  Q
    | |||||||    
T  41478889 actaaaata 41478881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 467
Target Start/End: Original strand, 22848352 - 22848463
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| ||||||| || | || |||||||||| ||  ||||||||||||||||||||||| |||||||| ||| ||||||||||| || ||||||    
T  22848352 aatattagtcgtttaaggcttgtacaagattattaaggaagcgattaattgtgttgatttcaatagtaaaattaatagtatttattaaaacacccttatt 22848451  T
Q  456 tattgtagttaa 467  Q
     |||||||||||    
T  22848452 aattgtagttaa 22848463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 31655216 - 31655088
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || |||||  |||| ||||| ||||| |||| || |||||||||||  ||||||||||||||||||||||||||  |||||||| || ||||    
T  31655216 atactccatcggtctcacaatattagtcgtttaaagtttgtgtacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatt 31655117  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || || ||||  |||||| ||||||||||    
T  31655116 tactataatatccttattaattgtagtta 31655088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 42803599 - 42803699
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||||| ||  |||| |||||||||||| ||||||||  |||||||||||| ||||| ||||| ||  ||||| ||||||||||    
T  42803599 tttaaggtttatgcacgattatcaaagaaataattaattgtgttcatttcaattgtaaaattagtagtatttactaaaacaccattattaattgtagtta 42803698  T
Q  467 a 467  Q
    |    
T  42803699 a 42803699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 3076740 - 3076659
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||| ||||||||||||| ||| |||| ||||| ||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  3076740 tctcaaaataatagtcatgtaacgtttgtgcacaatt-ttaacaaaatgattaattgtgttgatttcaatgataaaattagta 3076659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 41062113 - 41062238
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||| ||| |||| |||||||||||| ||||||||| |||||||     ||||||||| ||||||| |||||||||  || |||||||||||| ||||    
T  41062113 atactcgctccgtctttaaataatagtcttttaaggttgatgcacg---gataagaaaataattaattatgttgattttgatgataaaattagtatcatt 41062209  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| || |||||| ||||||||||    
T  41062210 tactaaaacacccttattaattgtagtta 41062238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 466
Target Start/End: Complemental strand, 41496213 - 41496115
Alignment:
Q  368 ttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||| | |||||||||||| ||||| |||||||||||||||||||||  |||||||||| ||||||| ||||| |   ||||| ||||||||||    
T  41496213 ttaaggtttgtacacgattattaaaaaaataattaattgtgttgatttcaatggtaaaattagttgcatttagtaaaacatcattattaattgtagtta 41496115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 447
Target Start/End: Complemental strand, 41492449 - 41492356
Alignment:
Q  354 taaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    |||||||||||| | |||||||| ||| ||||| ||||||||||||||||||||| | ||||||||  ||||||||||  |||||| |||||||    
T  41492449 taaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgacatttactaaaata 41492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 42922830 - 42922894
Alignment:
Q  351 ctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||||||| |||||| |||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  42922830 ctctaaattatagtcgtttaagatttgtgcatgattattaagaaaatgattaattgtgttgattt 42922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 356 - 467
Target Start/End: Complemental strand, 29570537 - 29570426
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||| ||| ||||||||||||||  |||||||||||||||||||||| |||  |||||||| ||| ||||  ||||| ||  |||||    
T  29570537 aatattagtcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatgttaaaattattagtatttgctaaaacacctttatt 29570438  T
Q  456 tattgtagttaa 467  Q
     |||||||||||    
T  29570437 aattgtagttaa 29570426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 462
Target Start/End: Original strand, 15439299 - 15439393
Alignment:
Q  368 ttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgta 462  Q
    ||||| ||| ||||||||  ||||| |||||||||||||| || ||||||||  ||||||||||| |||||| ||||||||| ||||| ||||||    
T  15439299 ttaagttttgtgcacgatatttaaggaaatgattaattgtattaatttcaatggtaaaattagtatcatttactaaaatacttttattaattgta 15439393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 6615870 - 6615931
Alignment:
Q  378 tgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattta 439  Q
    ||||||||||||||  |||| |||||||||||||||||||||  ||||||||||||||||||    
T  6615870 tgcacgattattaaataaataattaattgtgttgatttcaatggtaaaattagtagcattta 6615931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 350 - 466
Target Start/End: Original strand, 11796129 - 11796245
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    |||| ||||||||||  ||||||||||  |||| ||  | ||||||||| |||||||||||||||| ||| ||||||||| ||  ||||| ||||||| |    
T  11796129 tctcaaaataatagtggtttaaggtttgcgcacaatgttaaagaaaatggttaattgtgttgattttaatgataaaattaatattatttactaaaatatt 11796228  T
Q  450 cttatttattgtagtta 466  Q
     ||||| ||||||||||    
T  11796229 attattaattgtagtta 11796245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 29856179 - 29856082
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||| ||| ||||||||||||||| |||| |  ||||| |||||||||||| ||||||||| || || ||  ||||||||||||||| ||||||||||    
T  29856179 tttaagatttgtgcacgattattaaggaaataa--aattgcgttgatttcaatgataaaattaatatcacttgctaaaatactcttattaattgtagtta 29856082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 37184058 - 37184158
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||| ||| |||| |||| |||| |||||||||||||| ||||||||||||  |||||||| || |||||| |||||||   ||||| ||||||||||    
T  37184058 tttaagttttgtgcaagatttttaaaaaaatgattaattgagttgatttcaatggtaaaattaatatcatttactaaaatatctttattcattgtagtta 37184157  T
Q  467 a 467  Q
    |    
T  37184158 a 37184158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 19930078 - 19930032
Alignment:
Q  369 taaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||    
T  19930078 taagatttatgcacgattattaagaaaatgattaattttgttgattt 19930032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 5731893 - 5731811
Alignment:
Q  384 attattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||  ||| |||||| ||||| |  |||||| || |||||||    
T  5731893 attattaagaaaatgattaattgtgttcattttaataacaaaatgtgtatcatttactaaaacatccttattaatcgtagtta 5731811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 4441129 - 4441056
Alignment:
Q  393 aaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||| ||||||||||||||||| ||| ||||||||| ||  ||||| ||||||| | ||||| ||||||||||    
T  4441129 aaaataattaattgtgttgattttaatgataaaattaatattatttactaaaatatttttattaattgtagtta 4441056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 467
Target Start/End: Original strand, 8493832 - 8493917
Alignment:
Q  382 cgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    ||||| ||||||| || |||| ||| ||| ||||||||  |||||||||||  ||||||||| ||||||||||| ||| |||||||    
T  8493832 cgattcttaagaatataattagttgggttaatttcaatcgtaaaattagtatgatttattaatatactcttattaattttagttaa 8493917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 447
Target Start/End: Original strand, 18890555 - 18890614
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    ||||||||||||||| ||| |||| ||| |||  ||||||||||| ||||||||||||||    
T  18890555 ttaagaaaatgattagttgagttgtttttaatggtaaaattagtatcatttattaaaata 18890614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 502
Target Start/End: Complemental strand, 9515765 - 9515723
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    ||||||||||||||||||||||| | ||||| |||||||||||    
T  9515765 gtagttaagttgaatgaaattcattaaataagagtataatagt 9515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 18841592 - 18841514
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||| ||||||||||||| | ||||||| |||  |||||||| || |||||| ||||||||  ||||| ||||||||||    
T  18841592 ttaaaaaaatgattaattatattgatttaaatggtaaaattaatatcatttaataaaataccgttattaattgtagtta 18841514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 492
Target Start/End: Complemental strand, 843313 - 843285
Alignment:
Q  464 ttaagttgaatgaaattcaatgaataata 492  Q
    |||||||||||||||||||||||||||||    
T  843313 ttaagttgaatgaaattcaatgaataata 843285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 3348074 - 3348169
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttat--gcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    ||||||||| ||| ||||||||||||| ||||||  | ||  ||||| |||||||| |||| ||||||| |||||||||  ||  |||||||||||    
T  3348074 tactccctccgtcactaaataatagtcgtttaagtctgatgggcacggttattaaggaaattattaattatgttgattttgatggtaaaattagta 3348169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 355 - 427
Target Start/End: Complemental strand, 5282488 - 5282416
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaat 427  Q
    ||||||||||  |||||||||| || ||  || ||||||||||||||||||||| | |||| ||| |||||||    
T  5282488 aaataatagttgtttaaggtttctgtacagtttttaagaaaatgattaattgtgctaattttaatgataaaat 5282416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 342 - 414
Target Start/End: Complemental strand, 31748041 - 31747969
Alignment:
Q  342 tccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatt 414  Q
    |||||| |||||  |||| || || |||||| |||||||   ||||||||| |||||||||||||||||||||    
T  31748041 tccctccgtctcacaatattattcgtttaagatttatgcgtcattattaaggaaatgattaattgtgttgatt 31747969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 8e-38; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 11907557 - 11907685
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  ||  ||||||||||| ||||    
T  11907557 atactccctccgtctctaaataatagtcatttaaggttaatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 11907656  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| || |||||| ||||||||||    
T  11907657 tactaaaacacccttattaattgtagtta 11907685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 32884964 - 32884836
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||| |||| |||||  |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  32884964 atacttcctccgtctcacaatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtagaattagtagcatt 32884865  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| ||||||||| ||||||||||    
T  32884864 tagtaaaacactcttattaattgtagtta 32884836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 367 - 500
Target Start/End: Original strand, 46396870 - 46397003
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||||||||  |||||||| ||||||||| ||||| ||||||||| ||||||||||    
T  46396870 tttaaggtttgtgcacgatcattaagtaaatgattaattgtgttgatttcaatggtaaaattaatagcatttactaaaacactcttattaattgtagtta 46396969  T
Q  467 agttgaatgaaattcaatgaataatagtataata 500  Q
    ||||| || ||||||| | |||||  ||||||||    
T  46396970 agttggataaaattcattaaataagggtataata 46397003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 344 - 467
Target Start/End: Complemental strand, 2653575 - 2653454
Alignment:
Q  344 cctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaa 443  Q
    |||| ||||||||||||||||  |||||| ||| |||| |||||||||  ||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  2653575 cctccgtctctaaataatagttgtttaagatttgtgcatgattattaa--aaatgattaattgtgttgatttcaattgtaaaattagtatcatttattaa 2653478  T
Q  444 aatactcttatttattgtagttaa 467  Q
    |||||||||||| |||||||||||    
T  2653477 aatactcttattaattgtagttaa 2653454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 49428300 - 49428428
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||||||| |||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||||||  |||||||| ||  |||    
T  49428300 atactccctccgtctctaaattatagtcgtttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggtaaaattaatataatt 49428399  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || |||||||| |||||| ||||||||||    
T  49428400 tactaaaatacccttattaattgtagtta 49428428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 33790690 - 33790817
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||  |||||    
T  33790690 tactcccttcgtctctaaataatagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtttcattt 33790789  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
      ||||| || |||||| ||||||||||    
T  33790790 gctaaaacacccttattaattgtagtta 33790817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 38405061 - 38405188
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||| ||||||||| |||  |||||||| || |||||    
T  38405061 tactccctccgtctctaaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggtaaaattaatatcattt 38405160  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| |||||| ||||||||||    
T  38405161 actaaaatacccttattaattgtagtta 38405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 339 - 465
Target Start/End: Original strand, 47464324 - 47464450
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||| |||| ||||  |||| ||||| ||||||||||  |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  47464324 tactctctctatctcacaatattagtcgtttaaggtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 47464423  T
Q  439 attaaaatactcttatttattgtagtt 465  Q
    | ||||| ||||||||| |||||||||    
T  47464424 actaaaaaactcttattaattgtagtt 47464450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 52247386 - 52247514
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||||||| |||||| ||||||| || ||||||||||||||||||||||||||||||||| ||||||||  |||||||| ||  |||    
T  52247386 atactccctccgtctctaaattatagtcgtttaaggattgtgcacgattattaagaaaatgattaattgtgttaatttcaatggtaaaattaatacaatt 52247485  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || |||||||  |||||| ||||||||||    
T  52247486 tactaaaatatccttattaattgtagtta 52247514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 52859757 - 52859885
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||||||||||||||  |||||| |||||||||||||||||| ||||||||||||||||||||||  ||  ||||||||||| ||||    
T  52859757 atactccctccgtctctaaataatagtcgcttaaggcttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 52859856  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| |  |||||| ||||||||||    
T  52859857 tactaaaacatccttattaattgtagtta 52859885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 331 - 466
Target Start/End: Original strand, 49175885 - 49176020
Alignment:
Q  331 ataaatcatactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattag 430  Q
    |||||| ||||||||| | || | ||||||||||| |||||||||| |||| |||| |||||||||||||||||||||  ||||||||| ||||||||||    
T  49175885 ataaattatactccctttatcacaaaataatagtcgtttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatgataaaattag 49175984  T
Q  431 tagcatttattaaaatactcttatttattgtagtta 466  Q
    || |||||| |||||||  |||||| ||||||||||    
T  49175985 tatcatttactaaaataaccttattaattgtagtta 49176020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 51625237 - 51625139
Alignment:
Q  347 ctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    |||||||||||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| |||||    
T  51625237 ctgtctctaaattatagtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaa 51625139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 337 - 466
Target Start/End: Complemental strand, 34360819 - 34360690
Alignment:
Q  337 catactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcat 436  Q
    ||||||||||| |||||  |||| || || ||||| |||| ||||||||||||||  |||||||||||||| |||||||||||  |||||||||||||||    
T  34360819 catactccctccgtctcacaatattaatcgtttaaagtttgtgcacgattattaaagaaatgattaattgtattgatttcaatggtaaaattagtagcat 34360720  T
Q  437 ttattaaaatactcttatttattgtagtta 466  Q
    ||| ||||| ||||||||| ||||||||||    
T  34360719 ttactaaaacactcttattaattgtagtta 34360690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 502
Target Start/End: Complemental strand, 4972722 - 4972559
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||| || |||||  |||| ||||| |||||| ||| ||||||||||||||  ||||||||||||||||||||||||||   |||||| ||  |||||    
T  4972722 tactccatccgtctcacaatattagtcgtttaagatttgtgcacgattattaatgaaatgattaattgtgttgatttcaattgaaaaattggtgacattt 4972623  T
Q  439 attaaaatactcttatttattgtagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    | ||||| ||||||||| |||||||||| |||  |||||||||||| |||||  ||||||||||    
T  4972622 actaaaacactcttattaattgtagttatgttagatgaaattcaataaataagtgtataatagt 4972559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 7061623 - 7061750
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||||||||  |||| ||||| |||||||||| | ||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||    
T  7061623 tactccctctgtctcacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcattt 7061722  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | || ||||   ||||| ||||||||||    
T  7061723 actataatatctttattaattgtagtta 7061750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 17114602 - 17114475
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||| |||||||||||| ||||||||| ||||||  |||||||| ||||||||||||||||||||||  ||  ||||||||||| |||||    
T  17114602 tactccctccgtctttaaataatagtcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcattt 17114503  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  17114502 actaaaacacccttattaattgtagtta 17114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 17237255 - 17237382
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| |||||||||||||||| |||| ||||||||||||||| |||||||||||||||| ||||  ||||||||||| |||||    
T  17237255 tactccctccgtctcacaatactagtcatttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggtaaaattagtaacattt 17237354  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| |  |||||| ||||||||||    
T  17237355 actaaaacaaccttattaattgtagtta 17237382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 42517598 - 42517724
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||||| ||||||| ||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||||  ||||||||  | |||||    
T  42517598 tactccctctgt-tctaaattatagtcaattaatgtttgtacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaagatcattt 42517696  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| |||||| ||| ||||||    
T  42517697 actaaaatacccttattaattatagtta 42517724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 47772978 - 47773105
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||  |||||||| |||| |||||||||||||||||  ||  ||||||||||| |||||    
T  47772978 tactccctccgtctctaaataatagtcgtttaaggttgatgcacagttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcattt 47773077  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  47773078 actaaaacacccttattaattgtagtta 47773105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 349 - 500
Target Start/End: Original strand, 28500860 - 28501015
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||| |||| | ||||| |||| ||||||||||||||| |||||||| |||||||||||||||||  |||||||| || |||||| ||||||||    
T  28500860 gtctctaaattatagccgtttaatgtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatac 28500959  T
Q  449 tcttatttattg----tagttaagttgaatgaaattcaatgaataatagtataata 500  Q
     |||||| ||||    ||||||||||  |||||||||||| |||||  ||||||||    
T  28500960 ccttattaattgcagttagttaagtttgatgaaattcaataaataagggtataata 28501015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 354 - 466
Target Start/End: Complemental strand, 2066936 - 2066824
Alignment:
Q  354 taaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactctta 453  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||  ||  |||| ||||||  ||||||||||| || ||||    
T  2066936 taaataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaagttagtattatttattaaaacaccctta 2066837  T
Q  454 tttattgtagtta 466  Q
    || ||| ||||||    
T  2066836 ttaattttagtta 2066824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 339 - 467
Target Start/End: Original strand, 38502441 - 38502569
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||| ||| ||||||||||||||||| ||||||||| |||||   |||||||| |||| |||||||||||||||||  ||  ||||||||||| |||||    
T  38502441 tactctctccgtctctaaataatagtcgtttaaggttgatgcatagttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcattt 38502540  T
Q  439 attaaaatactcttatttattgtagttaa 467  Q
    ||||||||||| ||||| ||| |||||||    
T  38502541 attaaaatacttttattaattatagttaa 38502569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 44536183 - 44536282
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||| || ||||||||||| || |||||| ||||||||||    
T  44536183 tttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttaatggtaaaattagcaggatttattaaaacacccttattaattgtagtta 44536282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 342 - 452
Target Start/End: Original strand, 8175542 - 8175652
Alignment:
Q  342 tccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttatt 441  Q
    |||||||||||| ||||||||||  |||| || || |||| ||||||||| ||||||| |||||||||||||||||||  |||||||| || ||||||||    
T  8175542 tccctctgtctcaaaataatagttgtttatggcttgtgcatgattattaaaaaaatgaataattgtgttgatttcaatggtaaaattaatatcatttatt 8175641  T
Q  442 aaaatactctt 452  Q
    |||||||||||    
T  8175642 aaaatactctt 8175652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 356 - 466
Target Start/End: Original strand, 40122830 - 40122940
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||| ||| ||||||||||||||| ||||||||||||| |||||||| |||  |||||||||||||||||| ||||| || ||||||    
T  40122830 aatattagtcgtttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatgttaaaattagtagcatttactaaaacacccttatt 40122929  T
Q  456 tattgtagtta 466  Q
     ||||||||||    
T  40122930 gattgtagtta 40122940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 339 - 439
Target Start/End: Complemental strand, 6609924 - 6609823
Alignment:
Q  339 tactccctctgtctctaaataatagt-catttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||||| |||||||||||||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||||  ||  ||||||||||| ||||    
T  6609924 tactccctccgtctctaaataatagttcgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 6609825  T
Q  438 ta 439  Q
    ||    
T  6609824 ta 6609823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 350 - 465
Target Start/End: Original strand, 11288600 - 11288714
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    ||||| ||| ||| || ||||||||||||| ||||||||||||||||||||||||||| |||||||||||   ||||||| || |||||| ||||||| |    
T  11288600 tctctgaattataatcgtttaaggtttatgtacgattattaagaaaatgattaattgtattgatttcaatggcaaaattaatatcatttactaaaata-t 11288698  T
Q  450 cttatttattgtagtt 465  Q
    |||||| |||||||||    
T  11288699 cttattaattgtagtt 11288714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 16821290 - 16821417
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  || | ||||| |||||||||| ||||||||||||||   ||||||||||||||||||||||||| |||||||||||| |||||    
T  16821290 tactccctccgtctcacaaaattagtcgtttaaggtttgtgcacgattattaatgcaatgattaattgtgttgatttcaatgataaaattagtatcattt 16821389  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | || ||||  |||||| ||| ||||||    
T  16821390 actataatatccttattaattatagtta 16821417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 36985948 - 36985821
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| ||||| |||||||| || |||||| ||| |  |||||| || || ||||||||||||||||||||||||||  ||||||||||| |||||    
T  36985948 tactccctccgtctcaaaataatactcgtttaagatttttatacgatttttcaggaaatgattaattgtgttgatttcaatggtaaaattagtatcattt 36985849  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| | |||| ||||||||||    
T  36985848 actaaaatacccgtattaattgtagtta 36985821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 339 - 445
Target Start/End: Complemental strand, 43237405 - 43237299
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||| |||| |||||  |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||||||||||  ||||    
T  43237405 tactgcctccgtctcacaatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggtaaaattagtaatattt 43237306  T
Q  439 attaaaa 445  Q
    | |||||    
T  43237305 actaaaa 43237299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 467
Target Start/End: Complemental strand, 52869212 - 52869106
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattg 460  Q
    ||||| |||||||||| ||||| ||||||||| |||| |||||||||||||||||||||| ||| |||| || | |||||||||||||  ||||| ||||    
T  52869212 tagtcgtttaaggtttgtgcacaattattaaggaaataattaattgtgttgatttcaatagtaagattaatatcgtttattaaaatacctttattaattg 52869113  T
Q  461 tagttaa 467  Q
    |||||||    
T  52869112 tagttaa 52869106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 345 - 466
Target Start/End: Complemental strand, 3689718 - 3689597
Alignment:
Q  345 ctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaa 444  Q
    ||||| || |||||||||||| ||||||||||||| ||| |||||||  |||||||||||||| |||||||  ||  ||||||||||| |||||| ||||    
T  3689718 ctctgcctttaaataatagtcgtttaaggtttatgtacggttattaaagaaatgattaattgtattgattttgatggtaaaattagtatcatttactaaa 3689619  T
Q  445 atactcttatttattgtagtta 466  Q
    | ||||||||| ||| ||||||    
T  3689618 acactcttattaattatagtta 3689597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 6643618 - 6643746
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||| ||| |||||  |||| ||||  ||||| ||||  |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  6643618 atactcactccgtctcacaatattagtagtttaatgtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatt 6643717  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| |   ||||| ||||||||||    
T  6643718 tactaaaacatctttattaattgtagtta 6643746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 467
Target Start/End: Original strand, 32469907 - 32470035
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||| | |||| |||||||| |  |||||| ||||||||  ||| | |||||||||||||||||||||||||| |||  ||||||||||| |||||    
T  32469907 tactccctttatctcaaaataatatttgtttaagatttatgcataattttaaagaaaatgattaattgtgttgattttaatggtaaaattagtatcattt 32470006  T
Q  439 attaaaatactcttatttattgtagttaa 467  Q
    ||||||| | ||||||| | |||||||||    
T  32470007 attaaaacattcttattaactgtagttaa 32470035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 49747105 - 49747014
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||| |||||||| |||| || |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  49747105 aatattagtcattcaaggcttgtgcacgattattaa-aaaataattaattgtgttgatttcaatgataaaattagtagtatttactaaaatac 49747014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 467
Target Start/End: Complemental strand, 29575229 - 29575142
Alignment:
Q  380 cacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    |||||||| ||||||||||||||||| |||| |||| ||| ||||||||| || ||||||||||||||||||| || |||||||||||    
T  29575229 cacgattactaagaaaatgattaattatgttaatttaaatgataaaattaataacatttattaaaatactcttgttaattgtagttaa 29575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 30192339 - 30192240
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||| |||| | ||||||| |||||||||||||||||||||||||||||||| ||||||||| |  |||||  ||||||| ||||||| ||||||||||    
T  30192339 tttaatgtttgtacacgatttttaagaaaatgattaattgtgttgatttcaattataaaattaatgtcatttgctaaaatattcttattaattgtagtta 30192240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 35311210 - 35311309
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| ||||||||||||||| |||||||||||| |||| ||||||||  |||||||| | ||||||| || || ||||||||| ||||||||||    
T  35311210 tttaaggtttgtgcacgattattaaggaaatgattaattatgttaatttcaatggtaaaattaattgcatttactagaacactcttattaattgtagtta 35311309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 356 - 466
Target Start/End: Original strand, 2942621 - 2942730
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||| |  | |||||||||  ||||||||||||||||||||||| || ||||||||||||||||||| ||||| || ||||||    
T  2942621 aatattagtcgtttaaggtttgtataagattattaaagaaatgattaattgtgttgatttcgatgataaaattagtagcatttactaaaacac-cttatt 2942719  T
Q  456 tattgtagtta 466  Q
     ||||||||||    
T  2942720 aattgtagtta 2942730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 35380326 - 35380419
Alignment:
Q  373 gtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||| |||||||||||||||||||||||||| ||||||||| |||  |||||||||||||||||| ||||| |   ||||| ||||||||||    
T  35380326 gtttatacacgattattaagaaaatgattaattatgttgattttaatggtaaaattagtagcatttactaaaacatcattattaattgtagtta 35380419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 500
Target Start/End: Original strand, 27880201 - 27880363
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||| |||||| || ||||||||||| |||||||||| |  | |||| ||||  ||||||||| ||||||||||||||||  ||||||||||| |||||    
T  27880201 tactctctctgtttcaaaataatagtcgtttaaggtttgtatatgatttttaaataaatgatta-ttgtgttgatttcaatggtaaaattagtatcattt 27880299  T
Q  439 attaaaatactcttatttattgtagtta--agttgaatgaaattcaatgaataatagtataata 500  Q
    | || |||||||||||  |||||| |||  ||||| |||||||| ||| |||||  ||||||||    
T  27880300 actagaatactcttatcaattgtacttaatagttggatgaaatttaataaataaaggtataata 27880363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 464
Target Start/End: Original strand, 42616875 - 42616987
Alignment:
Q  352 tctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactct 451  Q
    ||||||| |||||| |||||| ||| |||| |||||||||  |||||||||| |||||||||||||||  |||||||| || |||||| ||||||| | |    
T  42616875 tctaaattatagtcgtttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggtaaaattaatatcatttactaaaatatttt 42616974  T
Q  452 tatttattgtagt 464  Q
    |||| ||||||||    
T  42616975 tattaattgtagt 42616987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 337 - 462
Target Start/End: Complemental strand, 462122 - 461997
Alignment:
Q  337 catactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcat 436  Q
    |||| |||||| ||||| |||||||||| ||||||| ||| ||||  ||| |||||||||||||||||||| |||||||||||  ||||| || ||  ||    
T  462122 cataatccctccgtctcgaaataatagtaatttaagatttgtgcataatttttaagaaaatgattaattgtattgatttcaatggtaaaagtaatattat 462023  T
Q  437 ttattaaaatactcttatttattgta 462  Q
    ||| |||||||  |||||| ||||||    
T  462022 ttactaaaatatccttattaattgta 461997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 3670042 - 3669965
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    ||||||| |||||||  ||||||||||| |||||| |||||||| |||| |||| |||||||||||||||||||||||    
T  3670042 atactccatctgtctgaaaataatagtcgtttaagatttatgcatgatttttaaaaaaatgattaattgtgttgattt 3669965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 354 - 447
Target Start/End: Complemental strand, 54506935 - 54506842
Alignment:
Q  354 taaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    |||| ||||||| |||||| ||| |  ||| ||||||||||||||||||| |||||||||||||||  |||||||| || ||||||||||||||    
T  54506935 taaaaaatagtcgtttaagatttgtttacggttattaagaaaatgattaactgtgttgatttcaatggtaaaattaatatcatttattaaaata 54506842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 352 - 415
Target Start/End: Original strand, 50263904 - 50263967
Alignment:
Q  352 tctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||||| | |||||||||||    
T  50263904 tctaaattatagtcgtttaaggtttgtgcacgattattaagaaaatgattcactgtgttgattt 50263967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 53346921 - 53346794
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||| |||   |||| ||||| |||||  ||| |||||||||||||||||||| ||| ||||||||  |||||||  |||||||| ||||||||    
T  53346921 tactccctctatcttacaatattagtcgtttaaaatttgtgcacgattattaagaaaataattgattgtgttagtttcaatggtaaaattaatagcattt 53346822  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||| ||||||    
T  53346821 actaaaacacccttattaattttagtta 53346794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 19265931 - 19265843
Alignment:
Q  378 tgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||| ||||||||||||||||||||| | || |||||||||||||||||| |   |||||||||||||  |||||| ||| ||||||    
T  19265931 tgcacggttattaagaaaatgattaattatatttatttcaataataaaattaatgttatttattaaaataaccttattaattatagtta 19265843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 25141889 - 25141949
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    ||||||||||| ||||||||||||  |||||| |||||||||||||||| |||||||||||    
T  25141889 aaataatagtcgtttaaggtttatatacgatttttaagaaaatgattaaatgtgttgattt 25141949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 30682155 - 30682282
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||| || ||||| |||||| ||||| |||||||||| ||||||| |||||| |||||||||||||||||| |||| | |  |||||||| || ||||    
T  30682155 atactctctatgtctttaaata-tagtcgtttaaggtttttgcacgactattaaaaaaatgattaattgtgttaattttattggtaaaattaatatcatt 30682253  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || || ||||  ||||||  |||||||||    
T  30682254 tactataatatccttattagttgtagtta 30682282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 22130209 - 22130078
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaat----tgtgttgatttcaataataaaattagtagc 434  Q
    |||||| || |||||  |||| ||||| |||||||||| |||||| |||||||| |||||||||||    |||||||||||||||  || |||||||| |    
T  22130209 tactccatccgtctcacaatattagtcgtttaaggtttgtgcacggttattaaggaaatgattaattgtatgtgttgatttcaatggtataattagtatc 22130110  T
Q  435 atttattaaaatactcttatttattgtagtta 466  Q
    |||||  |||| |  |||||| ||||||||||    
T  22130109 atttacaaaaacatccttattaattgtagtta 22130078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 465
Target Start/End: Complemental strand, 35998945 - 35998847
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtt 465  Q
    ||||| |||| || ||||||||||| ||||| |||| || ||||||||| || | ||||||||||| ||||||||||||||   ||||| |||||||||    
T  35998945 tttaatgtttttgtacgattattaaaaaaattattatttatgttgattttaacagtaaaattagtaacatttattaaaatatcattattaattgtagtt 35998847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 465
Target Start/End: Complemental strand, 53412254 - 53412144
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttat 454  Q
    ||||||||||  |||| | |||| | |||||| ||||||||| |||||||| | |||||||||||  ||||||||||| |||||| ||||||| | ||||    
T  53412254 aaataatagttgtttacgatttacgtacgatttttaagaaaacgattaattttattgatttcaatggtaaaattagtatcatttactaaaatatttttat 53412155  T
Q  455 ttattgtagtt 465  Q
    | ||| |||||    
T  53412154 taattatagtt 53412144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 464
Target Start/End: Original strand, 47358925 - 47359033
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    ||||||| || ||||| |||| |||| |||   ||||||||| ||| ||||||||||||||||| |||||||||| |  ||||  ||||||||| |||||    
T  47358925 aataataatcgtttaatgtttgtgcatgatgtctaagaaaattattgattgtgttgatttcaatgataaaattagaataattttctaaaatacttttatt 47359024  T
Q  456 tattgtagt 464  Q
     ||||||||    
T  47359025 aattgtagt 47359033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 50264102 - 50264166
Alignment:
Q  402 aattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||||||||||||  ||||||||  | |||||| ||||||||||||||| ||||||||||    
T  50264102 aattgtgttgatttcaatgttaaaattaacatcatttactaaaatactcttattaattgtagtta 50264166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 391 - 438
Target Start/End: Original strand, 25869855 - 25869902
Alignment:
Q  391 agaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||||||||||||||||||||||  ||||||||||| |||||    
T  25869855 agaaaatgattaattgtgttgatttcaattttaaaattagtaacattt 25869902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 466
Target Start/End: Original strand, 38663424 - 38663533
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||| || ||||||||||  |||| | ||||||  |||| |||||||  |||||||||||||||||| ||||| ||| |||||    
T  38663424 aatattagtcgtttaaggttt-tgaacgattattacaaaaacggttaattccgttgttttcaatggtaaaattagtagcatttactaaaacacttttatt 38663522  T
Q  456 tattgtagtta 466  Q
     || |||||||    
T  38663523 aatcgtagtta 38663533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 25233333 - 25233216
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||||||| || ||||||||| ||| ||  |||||||  |||| |||||||||||| ||||  ||  ||||||||||| |||||| ||||| ||    
T  25233333 gtctctaaataatattcgtttaaggttgatgtacagttattaaagaaataattaattgtgttaattttgatggtaaaattagtatcatttactaaaacac 25233234  T
Q  449 tcttatttattgtagtta 466  Q
    |  |||| ||| ||||||    
T  25233233 tagtattaattatagtta 25233216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 41711426 - 41711523
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    |||| ||| ||||||  |||||||||| ||||| ||| ||| | |||||||||||| ||||||||| |||  |||||||| || ||||| ||||||||    
T  41711426 tctcaaaacaatagttgtttaaggtttgtgcacaatttttatggaaatgattaattatgttgattttaatggtaaaattaatatcattttttaaaata 41711523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 48914102 - 48914195
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    ||||||||| | ||| ||||||||  |  |||||||||||||||  || ||||| |||| |||||||||||| ||||||||  |||||||||||    
T  48914102 tactccctccgactcaaaataatatgcggttaaggtttatgcacagtttttaaggaaataattaattgtgttcatttcaatggtaaaattagta 48914195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 34321715 - 34321746
Alignment:
Q  384 attattaagaaaatgattaattgtgttgattt 415  Q
    ||||||||||||||||||||||||||||||||    
T  34321715 attattaagaaaatgattaattgtgttgattt 34321746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 461
Target Start/End: Complemental strand, 5618676 - 5618582
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgt 461  Q
    ||||| |||| ||| |||||||||| |||||||| | |||||||||||| |||  ||||||||  |  |||||||||||||  |||||| |||||    
T  5618676 tttaatgtttgtgctcgattattaaaaaaatgatgagttgtgttgattttaatggtaaaattaaaattatttattaaaatatccttattaattgt 5618582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 21240708 - 21240790
Alignment:
Q  384 attattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||| |||||||||| |||||||||||  ||  ||||||||||| |||||| ||| | |  |||||| ||||||||||    
T  21240708 attattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcatttactaacacatccttattaattgtagtta 21240790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 26147635 - 26147701
Alignment:
Q  400 ttaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||||||||||  ||  ||||||||||| |||||| ||||| | ||||||| ||||||||||    
T  26147635 ttaattgtgttgattttgatggtaaaattagtatcatttactaaaacattcttattaattgtagtta 26147701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 466
Target Start/End: Complemental strand, 39397489 - 39397379
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    ||||||| || ||||| |||| ||||||||  ||||| |||||||||||| ||||||||||| |  |||| ||| |  |||||| |||||| | | ||||    
T  39397489 aataataatcgtttaaagtttgtgcacgatgtttaaggaaatgattaattatgttgatttcattggtaaatttaatgtcatttactaaaatccccatatt 39397390  T
Q  456 tattgtagtta 466  Q
     ||||||||||    
T  39397389 aattgtagtta 39397379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 464
Target Start/End: Complemental strand, 18532341 - 18532216
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||| || ||||| ||||||||||  |||||||||| |||| |||| |||   |||||||||||| | |  |||| |||  |||||||||||  ||||    
T  18532341 tactccatccgtctcaaaataatagttgtttaaggtttgtgcatgatttttacataaatgattaattatataaattttaatggtaaaattagtatgattt 18532242  T
Q  439 attaaaatactcttatttattgtagt 464  Q
    ||||||||| | ||||| ||| ||||    
T  18532241 attaaaatagttttattaattatagt 18532216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Complemental strand, 26885541 - 26885504
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagt 431  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  26885541 aaatgattaattgtattgatttcaatgataaaattagt 26885504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 419
Target Start/End: Original strand, 46878813 - 46878894
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaat 419  Q
    |||||| ||||||||| |||||  | || |||||  ||| ||||| ||| ||| |||||| |||||||||||||||||||||    
T  46878813 atactctctctgtctcaaaataccaatcgtttaaactttttgcacaatttttatgaaaataattaattgtgttgatttcaat 46878894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 447
Target Start/End: Complemental strand, 3098836 - 3098772
Alignment:
Q  383 gattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    ||||| ||| ||||||||||||| | ||||||||||| ||||||||  || |||||| |||||||    
T  3098836 gattagtaaaaaaatgattaattatattgatttcaatgataaaattgatatcatttactaaaata 3098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 21325171 - 21325223
Alignment:
Q  387 attaagaaaatgattaattgtgttgatttcaataataaaattagtagcattta 439  Q
    |||||| ||||||| ||||||||| ||||||||  ||||||||||| ||||||    
T  21325171 attaaggaaatgataaattgtgtttatttcaatggtaaaattagtatcattta 21325223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 349 - 455
Target Start/End: Original strand, 10366605 - 10366711
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||    
T  10366605 gtctctaaataacagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtatcatttattaaaacac 10366704  T
Q  449 tcttatt 455  Q
    |||||||    
T  10366705 tcttatt 10366711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 332 - 466
Target Start/End: Complemental strand, 37312119 - 37311985
Alignment:
Q  332 taaatcatactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagt 431  Q
    ||||| |||||||||  |||||  |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  37312119 taaattatactccctacgtctcacaatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagt 37312020  T
Q  432 agcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||| ||||| || |||||| ||||||||||    
T  37312019 agcatttactaaaaaacccttattaattgtagtta 37311985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 8679007 - 8679134
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||| |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  8679007 tactccctccgtctctaaattatagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattt 8679106  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| |  |||||| ||| ||||||    
T  8679107 actaaaagatccttattaattatagtta 8679134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 37695618 - 37695746
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggttta-tgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||  |||||||| || ||||    
T  37695618 tactccctccgtctctaaataatagtcgtttaaggttttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatt 37695717  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| || |||||| ||||||||||    
T  37695718 tactaaaacacccttattaattgtagtta 37695746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 30190609 - 30190740
Alignment:
Q  335 atcatactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagc 434  Q
    |||||||||  || ||||||||| ||||||| |||||||||| |||||| |||| ||| ||||||||||||||||||||||||||  ||||||||||| |    
T  30190609 atcatactctttccgtctctaaaaaatagtcgtttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggtaaaattagtatc 30190708  T
Q  435 atttattaaaatactcttatttattgtagtta 466  Q
    ||||| |||||||| |||||| ||||||||||    
T  30190709 atttactaaaatacccttattaattgtagtta 30190740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 356 - 467
Target Start/End: Original strand, 36460386 - 36460497
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| ||||| |||| |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||| |||||||    
T  36460386 aatattagtcgtttaaagtttgtgcacgattattaagaaaattattaattgtgttaatttcaatagtaaaattagtaacatttattaaaatattcttatt 36460485  T
Q  456 tattgtagttaa 467  Q
     |||||||||||    
T  36460486 aattgtagttaa 36460497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 349 - 466
Target Start/End: Original strand, 24569063 - 24569180
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||  ||||| ||||||||    
T  24569063 gtctctaaattatagtcgcttaagatttatgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatattatttactaaaatac 24569162  T
Q  449 tcttatttattgtagtta 466  Q
     |||||| ||||||||||    
T  24569163 ccttattaattgtagtta 24569180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 349 - 500
Target Start/End: Complemental strand, 49830282 - 49830125
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaa-tgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    |||||||||| |||||| ||||| |||| |||||||||||||| |||| |||||||||||||||||||||||| |||||||| || |||||| |||||||    
T  49830282 gtctctaaattatagtcgtttaacgtttgtgcacgattattaaaaaaaatgattaattgtgttgatttcaatagtaaaattaatatcatttactaaaata 49830183  T
Q  448 ctcttatttattgtagtta-----agttgaatgaaattcaatgaataatagtataata 500  Q
    |  ||||| ||||||||||     |||||||||||||||||| |||||  ||||||||    
T  49830182 ccattattaattgtagttagttggagttgaatgaaattcaataaataaatgtataata 49830125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 19823174 - 19823046
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||||||||||||||||| |||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||  ||  || |||||||| ||||    
T  19823174 atactccctctgtctctaaattatagttgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtagaattagtatcatt 19823075  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| || |||||| ||||||||||    
T  19823074 tactaaaacacccttattaattgtagtta 19823046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 29023919 - 29024045
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| ||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  ||  ||||||||||| |||||    
T  29023919 tactccctccgtcactaattaatagtcgtttaaggtttatgcacgattattaaaaaaatgattaattgtgttgattttgatggtaaaattagtatcattt 29024018  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| | ||||||| ||||||||||    
T  29024019 actaaaaca-tcttattaattgtagtta 29024045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 43253844 - 43253943
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||||| || |||||| ||||||||||    
T  43253844 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagtta 43253943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 349 - 467
Target Start/End: Complemental strand, 11905974 - 11905856
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| ||||  || |||||||||||| |||||| ||||  ||    
T  11905974 gtctctaaataatactcgtttaaagtttatgcacgattattaagaaaatgattaattgtgttaattttgatgataaaattagtatcatttactaaagcac 11905875  T
Q  449 tcttatttattgtagttaa 467  Q
     |||||| |||||||||||    
T  11905874 ccttattaattgtagttaa 11905856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 349 - 455
Target Start/End: Original strand, 51837922 - 51838028
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||| ||||||||||||||||| |||| || ||||||| |||||||||||||||||||||||||| ||||||||| || |||||| ||||||||    
T  51837922 gtctctaaattatagtcatttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaatac 51838021  T
Q  449 tcttatt 455  Q
     ||||||    
T  51838022 ccttatt 51838028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 331 - 439
Target Start/End: Original strand, 50035162 - 50035270
Alignment:
Q  331 ataaatcatactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattag 430  Q
    |||||| |||||||||| |||||  |||| ||| | |||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  50035162 ataaataatactccctccgtctcacaatattagacttttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaataataaaattag 50035261  T
Q  431 tagcattta 439  Q
    |||||||||    
T  50035262 tagcattta 50035270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 356 - 502
Target Start/End: Original strand, 31158492 - 31158639
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||| ||| |||||||| || |||||| ||||| |||| ||||    
T  31158492 aatattagtcgtttaaggtttgtgcacgattattaa-aaaatgattaattgtgctgatttcgatagtaaaattaataacatttactaaaacactcctatt 31158590  T
Q  456 tattg--tagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
      |||  ||||||||||  |||||||||||| |||||| ||||||||||    
T  31158591 atttgaatagttaagttagatgaaattcaataaataatggtataatagt 31158639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 45711013 - 45710885
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || ||||||||||||||||| ||||||||| ||||||| || |||||||||||||||||| |||||||||  ||  |||||||| || ||||    
T  45711013 atactccttcggtctctaaataatagtcgtttaaggttgatgcacggttgttaagaaaatgattaattatgttgattttgatggtaaaattaatatcatt 45710914  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| ||| ||||| ||||||||||    
T  45710913 tactaaaacacttttattaattgtagtta 45710885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 17652911 - 17652834
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    ||||||| || ||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  17652911 atactccatccgtctctaaataatagtcgtttgaggtttatgcacgattattaaggaaatgattaattgtgttgattt 17652834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 1778805 - 1778678
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||  |||| ||||| |||||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||| |  ||||    
T  1778805 atactccctccgtctcacaatattagtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatgataaaattaatgacatt 1778706  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| |  |||| ||||||||||||    
T  1778705 tactaaaacatcctta-ttattgtagtta 1778678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 11632242 - 11632116
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||| | |||||  |||| |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||   |||||||||||| ||||    
T  11632242 tactcccaccgtctcataatattagtcatttaagatttgtgcacgattattaa-aaaatgattaattgtgttgatttcaacggtaaaattagtagtattt 11632144  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| ||  ||||| ||||||||||    
T  11632143 actaaaacacctttattaattgtagtta 11632116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 355 - 454
Target Start/End: Complemental strand, 14194701 - 14194602
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttat 454  Q
    |||||| |||| |||||||||| ||||||||| ||||  ||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||| ||||    
T  14194701 aaataacagtcgtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatgataaaattagtaccatttactaaaatacttttat 14194602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 36476746 - 36476619
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||| || ||  |||||||||| | |||| ||||||||||||| ||| |||||||||||| ||||  |||||||| || |||||    
T  36476746 tactccctccgtctctaaattattgttgtttaaggtttgttcacggttattaagaaaataattgattgtgttgattgcaatggtaaaattaatatcattt 36476647  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| |||||| ||||||||||    
T  36476646 actaaaatacccttattaattgtagtta 36476619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 37497655 - 37497548
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || |||||||||||||| || |||||| ||||||||||||||||||| |||||||| |||||||||||||  ||  ||||||||||| ||||    
T  37497655 atactccatccgtctctaaataataatcgtttaagatttatgcacgattattaaggaaatgatttattgtgttgattttgatggtaaaattagtatcatt 37497556  T
Q  438 tattaaaa 445  Q
    || |||||    
T  37497555 tactaaaa 37497548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 52291045 - 52290928
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||||||| || ||||||||| ||| ||| ||||||||||||||||||||||| |||||||  ||  ||||||||||| |||||||||||| |     
T  52291045 gtctctaaataataatcgtttaaggttgatgtacggttattaagaaaatgattaattgtattgattttgatggtaaaattagtaccatttattaaaacag 52290946  T
Q  449 tcttatttattgtagtta 466  Q
     |||||| ||| ||||||    
T  52290945 ccttattaattatagtta 52290928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 367 - 455
Target Start/End: Complemental strand, 27471469 - 27471381
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||||| ||| |||||||||||||||||||||||||||| |||||||||||||  | |||||||| ||||||| ||||| |||||||||    
T  27471469 tttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggtgaaattagttgcatttactaaaacactcttatt 27471381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 33491053 - 33491125
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaatt 428  Q
    |||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  33491053 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatagtaaaatt 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 355 - 462
Target Start/End: Original strand, 12736541 - 12736648
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttat 454  Q
    ||||||||||  ||||| |||| ||||||||| ||||| |||||||||||||||||||||  ||| |||||||||||| |||||| || ||||| |||||    
T  12736541 aaataatagttgtttaaagtttgtgcacgatttttaaggaaatgattaattgtgttgattctaatgataaaattagtatcatttactacaatacccttat 12736640  T
Q  455 ttattgta 462  Q
    | ||||||    
T  12736641 taattgta 12736648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 339 - 454
Target Start/End: Complemental strand, 44301724 - 44301609
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| ||||| ||||||| ||| |||||||||| ||| ||| | ||||| ||||  |||||| ||||||||||||| |||||||||||| |||||    
T  44301724 tactccctccgtctcaaaataatggtcgtttaaggtttgtgcccgacttttaaggaaatatttaattatgttgatttcaatgataaaattagtatcattt 44301625  T
Q  439 attaaaatactcttat 454  Q
    | |||||||| |||||    
T  44301624 actaaaatacccttat 44301609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 465
Target Start/End: Complemental strand, 38795506 - 38795380
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||  |||| ||||||||||| ||||| |||| ||||||||  ||||| ||||||||||||||||| ||||||||  ||||||||||| |||||    
T  38795506 tactccctccatctcaaaataatagtcgtttaatgtttgtgcacgatatttaaggaaatgattaattgtgtttatttcaatggtaaaattagtatcattt 38795407  T
Q  439 attaaaatactcttatttattgtagtt 465  Q
    |   |||| | |||||| |||||||||    
T  38795406 acccaaatgcccttattaattgtagtt 38795380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 339 - 455
Target Start/End: Original strand, 5322892 - 5323006
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||| ||| |||| ||||| |||||  |||||||||| ||||||||||||||  |||||||||||| ||||||||||| | ||||||||| || |||||    
T  5322892 tactcactccgtctttaaattatagttgtttaaggtttgtgcacgattattaa--aaatgattaattatgttgatttcagtgataaaattaatatcattt 5322989  T
Q  439 attaaaatactcttatt 455  Q
    | |||||||| ||||||    
T  5322990 actaaaatacacttatt 5323006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 28690763 - 28690862
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||||||   |||||||| || |||||| |||||||   ||||| ||||||||||    
T  28690763 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaacggtaaaattaatatcatttactaaaatatctttattaattgtagtta 28690862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 349 - 464
Target Start/End: Original strand, 37772927 - 37773042
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||||| || |||| | |||||||||| |||| |||||||||| |||||||||||||| |||||| ||||  |||||||| || |||||| ||||||||    
T  37772927 gtctctatattatagccgtttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggtaaaattaatatcatttactaaaatac 37773026  T
Q  449 tcttatttattgtagt 464  Q
     |||||| ||| ||||    
T  37773027 ccttattaattatagt 37773042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 467
Target Start/End: Complemental strand, 3313395 - 3313288
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||||    ||| |||||||||  |||||||||||| ||| | ||||| || ||||||    
T  3313395 aatattagtcgtttaaggtttgtgcacgattattaagaaaatgatta----tgtcgatttcaatggtaaaattagtagaattaactaaaacacccttatt 3313300  T
Q  456 tattgtagttaa 467  Q
     |||||||||||    
T  3313299 aattgtagttaa 3313288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 34957666 - 34957592
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttga 412  Q
    |||||||||  ||||||||||||||||| ||||||||||||| || |||| |||| |||||||||||||||||||    
T  34957666 atactcccttcgtctctaaataatagtcgtttaaggtttatggacaattactaaggaaatgattaattgtgttga 34957592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 53560369 - 53560263
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||||||||||||||  ||||||||| ||||||||| |||||| |||||||||||| |||||||||  ||  ||||||| ||| |||||| ||||| ||    
T  53560369 gtctctaaataatagttgtttaaggttgatgcacgatgattaaggaaatgattaattatgttgattttgatggtaaaatttgtatcatttactaaaacac 53560270  T
Q  449 tcttatt 455  Q
     ||||||    
T  53560269 ccttatt 53560263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 51064771 - 51064864
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||| |||| |||||  |||| ||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||||||  |||||||||||    
T  51064771 tacttcctccgtctcataatattagtcgtttaaagtttatgcacgaatattaaaaaaatgattaattgtgttgctttcaatggtaaaattagta 51064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 23004380 - 23004462
Alignment:
Q  384 attattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||| |||||||||||||||| |||||||||  |||||||||||| || || ||||| || |||||| ||||||||||    
T  23004380 attattaaggaaatgattaattgtgtcgatttcaatggtaaaattagtagtatatactaaaacacccttattaattgtagtta 23004462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 21918441 - 21918364
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtt---tatgcacgattattaagaaaatgattaattgtgttga 412  Q
    ||||||||||||||||||||| |||||| ||||| | |   | |||||||||||||||||||||||||||| ||||||    
T  21918441 atactccctctgtctctaaattatagtcgtttaaaggtgtgtgtgcacgattattaagaaaatgattaattttgttga 21918364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 465
Target Start/End: Complemental strand, 34750631 - 34750532
Alignment:
Q  366 atttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtt 465  Q
    ||||||||||| ||||||||| || |  |||||||| ||||||||||||| |||  ||||||||||| |||||| ||||| |  |||||| |||||||||    
T  34750631 atttaaggtttgtgcacgatttttgatgaaatgattgattgtgttgattttaatggtaaaattagtatcatttactaaaacatccttattaattgtagtt 34750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 462
Target Start/End: Original strand, 48540969 - 48541076
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttat 454  Q
    ||||||||||  ||||| |||| ||||| ||  ||||| |||||| ||||| |||  ||||| |||||||||||| || |||||||||||||| ||||||    
T  48540969 aaataatagttgtttaaagtttgtgcacaatgtttaaggaaatgactaattatgtcaatttctataataaaattaatatcatttattaaaatattcttat 48541068  T
Q  455 ttattgta 462  Q
    | ||||||    
T  48541069 taattgta 48541076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 467
Target Start/End: Complemental strand, 54726618 - 54726519
Alignment:
Q  368 ttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||||  ||  |||||||| || |||||| ||||| |   ||||| |||||||||||    
T  54726618 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattttgatggtaaaattaatatcatttactaaaacatctttattaattgtagttaa 54726519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 3901151 - 3901229
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||| || |||||||| ||||||||| || |||||| ||||| | |||||||  |||||||||    
T  3901151 ttaagaaaatgattaattgtattaatttcaatgataaaattaatatcatttactaaaacattcttattagttgtagtta 3901229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 429
Target Start/End: Complemental strand, 7757661 - 7757599
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaatta 429  Q
    |||| |||||||||||| || ||||| ||| |||||||||||||||||||||| |||||||||    
T  7757661 tttagggtttatgcacgtttgttaaggaaaagattaattgtgttgatttcaatgataaaatta 7757599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 19609451 - 19609345
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||| |||||||| || |||||| ||| || | || | ||||||||||||||| ||||||||||||||||  |||||||| || ||||||  ||||||     
T  19609451 gtctcaaaataataatcgtttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatcgtaaaattaatatcatttacaaaaatat 19609352  T
Q  449 tcttatt 455  Q
    |||||||    
T  19609351 tcttatt 19609345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 347 - 429
Target Start/End: Complemental strand, 43719420 - 43719338
Alignment:
Q  347 ctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaatta 429  Q
    |||| ||||||||||||||  |||| |||| | |||||| ||||| ||||||||||||||||||||||| |||  ||||||||    
T  43719420 ctgtgtctaaataatagtcggttaaagtttgtacacgatcattaataaaatgattaattgtgttgattttaatggtaaaatta 43719338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 466
Target Start/End: Complemental strand, 19612068 - 19611944
Alignment:
Q  341 ctccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttat 440  Q
    ||||||| ||||| | |||||| |  ||||| |||| || |||||| |||||||| |||||||||||||||||||||||  |||||||| ||  |||||     
T  19612068 ctccctccgtctcgagataataattgtttaaagtttgtgtacgatttttaagaaagtgattaattgtgttgatttcaatgttaaaatta-tataatttac 19611970  T
Q  441 taaaatactcttatttattgtagtta 466  Q
    |||||||  |||||| ||||| ||||    
T  19611969 taaaatatccttattaattgttgtta 19611944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 12904975 - 12904899
Alignment:
Q  391 agaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata-ctcttatttattgtagtta 466  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||  |||||| |||||| || ||||| ||||||||||    
T  12904975 agaaaataattaattatgttgatttcaattataaaattagtatgatttatcaaaatatcttttattaattgtagtta 12904899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 359 - 466
Target Start/End: Complemental strand, 26467252 - 26467146
Alignment:
Q  359 aatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttat 458  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||| ||| || || ||| || ||||||||||||||   ||||| ||    
T  26467252 aatagtcgtttaaggtttatatacaattcgtaagaaaatgattgattgtgttgattttaatgat-aagttaatatcatttattaaaatatgtttattaat 26467154  T
Q  459 tgtagtta 466  Q
    ||||||||    
T  26467153 tgtagtta 26467146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 467
Target Start/End: Original strand, 30682068 - 30682147
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    ||||| |||||||||||||| || |||| |||  |||||| |||| |||||| ||||||| ||||||| |||||||||||    
T  30682068 ttaaggaaatgattaattgttttaattttaatgttaaaatgagtatcatttactaaaataatcttattaattgtagttaa 30682147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 394 - 467
Target Start/End: Original strand, 54477467 - 54477540
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    ||||| |||||||||||||||| |||  |||||||| || |||||| ||||||| | ||||| |||||||||||    
T  54477467 aaatggttaattgtgttgattttaatggtaaaattaatatcatttactaaaatatttttattaattgtagttaa 54477540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 415
Target Start/End: Complemental strand, 23068362 - 23068286
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||||| || |||||  |||| ||||||||||| |||| |||| |||||| |||||||| ||||||| |||||||||    
T  23068362 tactccatccgtctcataatattagtcatttaaagtttgtgcatgattatcaagaaaataattaattatgttgattt 23068286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 30711207 - 30711107
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| ||||   |||||||  |||| ||||||| ||||||||| ||| ||||||||| || |||||| ||||| ||  ||||| ||||||||||    
T  30711207 tttaaggtttgtgcattgttattaaagaaataattaattatgttgattttaatgataaaattaatatcatttactaaaacaccattattaattgtagtta 30711108  T
Q  467 a 467  Q
    |    
T  30711107 a 30711107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 38137413 - 38137489
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||| ||||| |||||||||| |||| |||||| ||  |||| ||| ||||||| |||||||||| |||||||||||    
T  38137413 aatattagtcgtttaaggtttgtgcatgattataaatgaaataattcattgtgtcgatttcaatagtaaaattagta 38137489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 44684988 - 44685048
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||||| |||||||||| ||||||||| ||| |||| |||| || |||||||||||||||    
T  44684988 ttaagaagatgattaattatgttgattttaatgataatattaatatcatttattaaaatac 44685048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 418
Target Start/End: Original strand, 49447747 - 49447826
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaa 418  Q
    |||||| ||| |||| || || ||||| ||||| |||| || ||||| |||||  |||||||||||||||||||||||||    
T  49447747 tactccatctatctcaaactattagtcgtttaatgtttgtgtacgataattaacgaaatgattaattgtgttgatttcaa 49447826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 40462464 - 40462386
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaat 427  Q
    ||||| |||||||| |  ||||||||||  ||  |||| |||||||||||||||||||| ||||||||| | |||||||    
T  40462464 gtctcaaaataataattgtttaaggtttgagcgtgatttttaagaaaatgattaattgttttgatttcagtgataaaat 40462386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 445
Target Start/End: Original strand, 24245109 - 24245153
Alignment:
Q  401 taattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    ||||| ||||||||||||||||||||||||||  ||||| |||||    
T  24245109 taattatgttgatttcaataataaaattagtattatttactaaaa 24245153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 29595724 - 29595788
Alignment:
Q  383 gattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    |||| ||||||||||| |||||| | ||||||| |||| |||||||| ||  |||||||||||||    
T  29595724 gatttttaagaaaatggttaattatattgattttaatagtaaaattaatattatttattaaaata 29595788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 500
Target Start/End: Original strand, 39043843 - 39043883
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataata 500  Q
    ||||||||||||||||||||||||| |||||  ||||||||    
T  39043843 gtagttaagttgaatgaaattcaataaataagggtataata 39043883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 83555 - 83427
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||  ||  ||||||||||| ||||    
T  83555 atactccctccgtctctaaataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatt 83456  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| | ||||||| ||||||||||    
T  83455 tactaaaacattcttattaattgtagtta 83427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 13962128 - 13962001
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||| || || ||    
T  13962128 tactccctccgcctctaaataatagtcatttaaggtttatgcacgtttattaaggaaatgattaattgtgttgattttaatgataaaattaatatcactt 13962029  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||  |||||| | ||||||||    
T  13962028 aataaaatatccttattaagtgtagtta 13962001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 339 - 445
Target Start/End: Complemental strand, 44180374 - 44180268
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||  ||||    
T  44180374 tactctctccgtctctaaataatagtcgtttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtataattt 44180275  T
Q  439 attaaaa 445  Q
    | |||||    
T  44180274 actaaaa 44180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 16560529 - 16560657
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||  ||  ||||| ||||| ||||    
T  16560529 atactccctccgtctctaaataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcatt 16560628  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| |  |||||| ||||||||||    
T  16560629 tactaaaacatccttattaattgtagtta 16560657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 16605133 - 16605005
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||  ||  ||||| ||||| ||||    
T  16605133 atactccctccgtctctaaataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcatt 16605034  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| |  |||||| ||||||||||    
T  16605033 tactaaaacatccttattaattgtagtta 16605005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 24516248 - 24516376
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||||||||||||  |||  ||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||    
T  24516248 atactccctctgtctcataattttagtcgtttaaggtttatacacgattattaataaaatgattaattgtgttgatttcaatggtaaaattagtaacatt 24516347  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| |  |||||| ||||||||||    
T  24516348 tactaaaaaaaccttattaattgtagtta 24516376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 26974198 - 26974068
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagt---agca 435  Q
    |||||| || |||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||| |   | ||    
T  26974198 tactccttccgtctctaaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatca 26974099  T
Q  436 tttattaaaatactcttatttattgtagtta 466  Q
    |||| ||||||||||||||| ||||||||||    
T  26974098 tttactaaaatactcttattaattgtagtta 26974068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 350 - 466
Target Start/End: Complemental strand, 27921146 - 27921030
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    |||||||||||||||  ||||||||| ||||||  ||||||||||||||||||||| ||||||||| |||  ||||||||||| |||||||||||| |||    
T  27921146 tctctaaataatagttgtttaaggttgatgcacagttattaagaaaatgattaattatgttgattttaatggtaaaattagtatcatttattaaaacact 27921047  T
Q  450 cttatttattgtagtta 466  Q
    |||||| ||||||||||    
T  27921046 cttattaattgtagtta 27921030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 28103903 - 28103775
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||  |||| | ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  28103903 atactccctccgtctcacaatatttgtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagcagcatt 28103804  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    ||  |||| || |||||| ||||||||||    
T  28103803 taccaaaacacccttattaattgtagtta 28103775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 7463382 - 7463255
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| ||||| ||||||| || |||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  7463382 tactccctccgtctcgtaatattagtcgtttaaggattgtgcacggttattaaggaaatgattaattgtgttgatttcaatgataaaattagtagcattt 7463283  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | | |||||| || ||| ||||||||||    
T  7463282 acttaaataccctcattaattgtagtta 7463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 34947669 - 34947542
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| ||||||||||||||||| |||||||||| |||| | |||||||  ||||||||||||||||||||||||||  |||||||| || |||||    
T  34947669 tactccctccgtctctaaataatagtcgtttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggtaaaattattatcattt 34947570  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  34947569 actaaaacacccttattaattgtagtta 34947542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 348 - 466
Target Start/End: Original strand, 759060 - 759178
Alignment:
Q  348 tgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||  ||||| ||||| |||||| ||||| |    
T  759060 tgtctctaaataatagtcatttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaaca 759159  T
Q  448 ctcttatttattgtagtta 466  Q
      |||||| ||||||||||    
T  759160 tccttattaattgtagtta 759178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 41506054 - 41506152
Alignment:
Q  368 ttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| |||  |||||||||||||||||| ||||| ||||||||| ||||||||||    
T  41506054 ttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttaatggtaaaattagtagcatttactaaaacactcttattaattgtagtta 41506152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 42935820 - 42935703
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||  ||  |||||||| || |||||| ||||| ||    
T  42935820 gtctctaaataatagtcgtttaaggttgatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacac 42935721  T
Q  449 tcttatttattgtagtta 466  Q
     |||||| ||||||||||    
T  42935720 ccttattaattgtagtta 42935703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 466
Target Start/End: Complemental strand, 12631452 - 12631347
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattg 460  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||| |||||||||||| |||||| |||| |  |||||| ||||    
T  12631452 tagtcatttaaggtttgtgcacgattattaaggaaataattaattgtattgatttcaatagtaaaattagtagtatttatcaaaacatccttattaattg 12631353  T
Q  461 tagtta 466  Q
    ||||||    
T  12631352 tagtta 12631347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 34100549 - 34100634
Alignment:
Q  381 acgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||   ||||| ||||||||||    
T  34100549 acgattattaagaaaatgattaattgtgttgatttcaatagtaaaattagtagcatttactaaaatatctttattaattgtagtta 34100634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 9786158 - 9786030
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || ||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||  ||  |||||||| |  ||||    
T  9786158 atactccatccgtctctaaataatagtcgtttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatttcatt 9786059  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| || |||||| ||||||||||    
T  9786058 tactaaaacacgcttattaattgtagtta 9786030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 11373387 - 11373515
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| || ||  |||| ||||| ||||||| || ||||||||||||||| ||||| ||||||||||||||||| ||  ||||||||||||||||    
T  11373387 atactccctccgtttcacaatattagtcgtttaaggattgtgcacgattattaaggaaatgtttaattgtgttgatttcgatggtaaaattagtagcatt 11373486  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| || |||||| ||||||||||    
T  11373487 tactaaaacacccttattaattgtagtta 11373515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 40076473 - 40076361
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||  ||  ||||||||||| |||||| ||||| |||    
T  40076473 tctctaaataatagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgttaattttgatggtaaaattagtatcatttactaaaacact 40076374  T
Q  450 cttatttattgta 462  Q
     ||||| ||||||    
T  40076373 attattaattgta 40076361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 5524521 - 5524422
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||||| ||| ||||| ||| ||||||    
T  5524521 tttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttaataaaacacttttattaattatagtta 5524422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 16904548 - 16904421
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||| || |||||| ||||||||||| |||||||||| ||||  ||| ||||||||||||||||||||||||||||||||| |||||||| || || ||    
T  16904548 tactctctatgtctcaaaataatagtcgtttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaatagtaaaattattatcactt 16904449  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
      |||||||||| |||| ||| ||||||    
T  16904448 tctaaaatactcgtattaattatagtta 16904421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 38391889 - 38391790
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  ||  ||||||||||| |||||| ||||| |||||| || ||||||||||    
T  38391889 tttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacactcttgttaattgtagtta 38391790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 356 - 466
Target Start/End: Complemental strand, 22738853 - 22738743
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||||||||||||||||||  |||||||||||||||| |||||||||  ||||||||||| |||||| |||||||  || |||    
T  22738853 aatattagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgtagatttcaatggtaaaattagtatcatttactaaaatatcctcatt 22738754  T
Q  456 tattgtagtta 466  Q
     ||||||||||    
T  22738753 aattgtagtta 22738743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 361 - 466
Target Start/End: Original strand, 19271715 - 19271820
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattg 460  Q
    ||||| ||||| | || |||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||| | ||||||||| ||||| ||||    
T  19271715 tagtcgtttaatgcttgtgcacgattattaaaaaaatgattaattgtgttgatttcaatgatcaaattagtggcattgactaaaatacttttattaattg 19271814  T
Q  461 tagtta 466  Q
    ||||||    
T  19271815 tagtta 19271820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 46211601 - 46211524
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||||||||| |||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  46211601 atactccctccgtctttaaataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattt 46211524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 2850840 - 2850968
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || |||||||||| |||||| |||| ||||| |||| |||||||||| |||||||||||| ||||||||||||| ||||||||| ||  |||    
T  2850840 atactccatccgtctctaaattatagtcgtttatggtttgtgcatgattattaaggaaatgattaattatgttgatttcaatgataaaattaatattatt 2850939  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || |||||||| || ||| ||| ||||||    
T  2850940 tactaaaataccctcattaattatagtta 2850968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 28202268 - 28202396
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||  ||  |||||||| |  ||||    
T  28202268 atactccatccgtctctaaataatagttgtttaaggtttatgcacggttattaagaaaataattaattgtgttgattttgatggtaaaattaatgtcatt 28202367  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| |  |||||| ||||||||||    
T  28202368 tactaaaacatccttattaattgtagtta 28202396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 356 - 467
Target Start/End: Original strand, 46478270 - 46478381
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| ||||| ||| || ||||||||||||  ||||||||||||||||| |||| |||| |||| ||||||||||||| |||||||| ||||||    
T  46478270 aatattagtcgtttaaagttcatacacgattattaattaaatgattaattgtgttaattttaatagtaaagttagtagcatttactaaaatacccttatt 46478369  T
Q  456 tattgtagttaa 467  Q
     |||||||||||    
T  46478370 aattgtagttaa 46478381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 467
Target Start/End: Original strand, 21759966 - 21760072
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattg 460  Q
    ||||| |||||||||| |||| |||||||||||||||||||||||||||||||||  ||  ||||||||||| |||||| ||||| || |||| | ||||    
T  21759966 tagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttaataaaacacccttactaattg 21760065  T
Q  461 tagttaa 467  Q
    |||||||    
T  21760066 tagttaa 21760072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 367 - 461
Target Start/End: Complemental strand, 33819355 - 33819261
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgt 461  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |||  ||||||||| |||||    
T  33819355 tttaaggttaatgtacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttacaaaatcactcttattaattgt 33819261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 342 - 467
Target Start/End: Original strand, 29835377 - 29835502
Alignment:
Q  342 tccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttatt 441  Q
    |||||| |||||  |||| || || |||||||||| ||| || |||||||| |||||||||||| ||||||||| |||  |||||||||||||||||| |    
T  29835377 tccctccgtctcgcaatattaatcgtttaaggtttgtgcgcgcttattaaggaaatgattaattatgttgatttaaatggtaaaattagtagcatttact 29835476  T
Q  442 aaaatactcttatttattgtagttaa 467  Q
    |||| ||||||||| |||| ||||||    
T  29835477 aaaacactcttattaattgcagttaa 29835502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 32018671 - 32018799
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| | |||||  |||||||||||||||||  ||| || |||||| ||||  |||||| |||||||||||||||||||| |||||||  || ||||    
T  32018671 atactccatttgtcttaaaataatagtcatttaaaatttttgtacgatttttaatgaaatgaataattgtgttgatttcaatagtaaaatttctatcatt 32018770  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||||||||||||| ||||| ||||    
T  32018771 tactaaaatactcttattaattgtcgtta 32018799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 8592428 - 8592527
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| |||| |||||||||  ||||||||||||||||||||||||||  | |||||||||| ||||| ||||| || |||||| ||||||||||    
T  8592428 tttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggttaaattagtagtatttaataaaacacccttattaattgtagtta 8592527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 356 - 466
Target Start/End: Original strand, 7457398 - 7457508
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| |||| |||||| |||| |||||||||||||| ||||||||||||| |||||||||||||  ||||||||||  |||||| ||||| || ||||||    
T  7457398 aatattagttatttaatgtttgtgcacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagttacatttactaaaagacccttatt 7457497  T
Q  456 tattgtagtta 466  Q
     | ||||||||    
T  7457498 aaatgtagtta 7457508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 21390466 - 21390337
Alignment:
Q  339 tactccctctgtctctaaataata--gtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcat 436  Q
    |||||| || ||||||||||||||  ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||  ||  ||||| || || |||    
T  21390466 tactccatccgtctctaaataatacagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttgatggtaaaactaatatcat 21390367  T
Q  437 ttattaaaatactcttatttattgtagtta 466  Q
    ||| ||||| |  |||||| ||||||||||    
T  21390366 ttactaaaacatccttattgattgtagtta 21390337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 349 - 415
Target Start/End: Complemental strand, 44424294 - 44424228
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  44424294 gtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattt 44424228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 466
Target Start/End: Complemental strand, 2459622 - 2459513
Alignment:
Q  355 aaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttat 454  Q
    ||||| ||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||||||   ||||||||||  |||||| || || || |||||    
T  2459622 aaatattagtcgtttaatgtttgtgcacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattagt--catttactacaacacccttat 2459525  T
Q  455 ttattgtagtta 466  Q
    | ||||||||||    
T  2459524 taattgtagtta 2459513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 367 - 455
Target Start/End: Complemental strand, 30866108 - 30866020
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||||||||| ||||||||||||||  ||||||||||||||||| ||||||||  || ||||| || |||||| |||||||||||||||    
T  30866108 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttaatttcaatggtataattaatatcatttactaaaatactcttatt 30866020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 23670654 - 23670528
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| || || |||||||||| ||||| |||||||||  ||| |||||||||||||||||| ||  |||||||| ||||||||    
T  23670654 tactccctccgtctcacaatattaatcgtttaaggtttgtgcacaattattaagggaat-attaattgtgttgatttccatggtaaaattaatagcattt 23670556  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| ||||||||| || |||||||    
T  23670555 actaaaacactcttattaatggtagtta 23670528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 36790915 - 36790852
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgatta 402  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  36790915 tactccctccgtctctaaataatagtcgtttaaggtttatgcacggttattaaggaaatgatta 36790852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 466
Target Start/End: Original strand, 21350605 - 21350712
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||| ||||||||||||||| ||||   |||||||||||||||||||  ||||| |||| | ||||| ||||| || ||||||    
T  21350605 aatattagtcgtttaaggtttgtgcacgattattaaggaaat---taattgtgttgatttcaatggtaaaaatagttgtatttactaaaacacccttatt 21350701  T
Q  456 tattgtagtta 466  Q
     ||||||||||    
T  21350702 aattgtagtta 21350712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 466
Target Start/End: Original strand, 31930468 - 31930584
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    ||||||||| |||||| ||||| |||||||||||||||||||  |||||||| | ||||||||||| |||  ||||| || |   |||| |||||||||     
T  31930468 tctctaaattatagtcgtttaaagtttatgcacgattattaaagaaatgattgactgtgttgattttaatggtaaaactaatctaattttttaaaatacc 31930567  T
Q  450 cttatttattgtagtta 466  Q
    |||||| ||||||||||    
T  31930568 cttattaattgtagtta 31930584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 462
Target Start/End: Complemental strand, 37245833 - 37245736
Alignment:
Q  367 tttaaggtttatgcacgattatt---aagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgta 462  Q
    |||||||||| ||||||||||||   ||||||| |||||||| |||||||||||||  |||| ||||||||||||| ||||| ||||||||| ||||||    
T  37245833 tttaaggtttgtgcacgattatttataagaaaaagattaattctgttgatttcaatggtaaa-ttagtagcatttactaaaacactcttattaattgta 37245736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 500
Target Start/End: Original strand, 32346040 - 32346185
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttatt------- 459  Q
    |||||||||| || ||| |||||||| |||| ||| |||||||||||||||||  |||||||| || ||| || ||||||||||||||| |||           
T  32346040 tttaaggtttgtgtacggttattaaggaaataattgattgtgttgatttcaatggtaaaattaatatcatctactaaaatactcttattaattataatta 32346139  T
Q  460 -----gtagttaagttgaatgaaattcaatgaataatagtataata 500  Q
         ||||||||||||||||||||||||| |||||  ||||||||    
T  32346140 gtggagtagttaagttgaatgaaattcaataaataagggtataata 32346185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 48609011 - 48608955
Alignment:
Q  359 aatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    ||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  48609011 aatagtcgtttgaggtttatgcatgattattaaggaaatgattaattgtgttgattt 48608955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 49101807 - 49101705
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt---tattaaaatactcttatttattgtag 463  Q
    |||||||||| |  |||||| ||||||||||||||||||||||| |||| ||  ||||||||| || ||||   ||||||||||||| |||| |||||||    
T  49101807 tttaaggtttgtttacgatttttaagaaaatgattaattgtgtttattttaaggataaaattaatatcatttactattaaaatactcatattaattgtag 49101708  T
Q  464 tta 466  Q
    |||    
T  49101707 tta 49101705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 3178192 - 3178291
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| |||| |||||||||| |||||||| |||||||||||||  ||  |||||||| || |||||| ||||| ||  ||||| ||||||||||    
T  3178192 tttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattttgatggtaaaattaatatcatttactaaaacacctttattaattgtagtta 3178291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 361 - 466
Target Start/End: Complemental strand, 43874070 - 43873965
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattg 460  Q
    ||||| ||||||||| ||||| | |||||||  ||||||||||||||||||||||  ||  |||||||| || |||||| ||||| || |||||| | ||    
T  43874070 tagtcgtttaaggttgatgcatggttattaaagaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaaatg 43873971  T
Q  461 tagtta 466  Q
    ||||||    
T  43873970 tagtta 43873965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 17828309 - 17828438
Alignment:
Q  339 tactccctctgtctctaaataatagt---catttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagca 435  Q
    ||||||||| |||||||||| |||||   | ||||| |||| |||||||| |||||| ||| ||||| || |||||||||||||  |||||||| || ||    
T  17828309 tactccctccgtctctaaattatagtagtcgtttaaagtttgtgcacgat-attaaggaaacgattatttttgttgatttcaatggtaaaattaatatca 17828407  T
Q  436 tttattaaaatactcttatttattgtagtta 466  Q
    ||||  ||| |||||||||  ||||||||||    
T  17828408 tttacaaaattactcttatcaattgtagtta 17828438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 401
Target Start/End: Complemental strand, 34636021 - 34635958
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgatt 401  Q
    ||||||| || |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||    
T  34636021 atactccatccgtctctcaatattagccatttaaggtttgtgcacgattattaaggaaatgatt 34635958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 32018917 - 32019003
Alignment:
Q  381 acgattattaagaaaatgattaattgtgttga-tttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||| ||||  ||||||||||||||||||| ||| |||| |||||||  || |||||| ||||||||||||||| ||||| ||||    
T  32018917 acgatttttaatgaaatgattaattgtgttgattttgaatagtaaaatttctatcatttactaaaatactcttattaattgttgtta 32019003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 35333151 - 35333085
Alignment:
Q  400 ttaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||| ||| ||||| ||  ||||||||||||| | ||||| ||||||||||    
T  35333151 ttaattgtgttgatttcaattatataattaatattatttattaaaatattattattaattgtagtta 35333085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 47045469 - 47045538
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagt 464  Q
    ||||||||||||| ||||||||||||  ||||||||||| |||||  |||||||| |||||| ||||||||    
T  47045469 aaatgattaattgagttgatttcaatg-taaaattagtatcatttcctaaaatacccttattaattgtagt 47045538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 4958597 - 4958658
Alignment:
Q  366 atttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaat 427  Q
    ||||||||||| ||||  ||| |||||||||||| ||||| |||||||||||||||| ||||    
T  4958597 atttaaggtttgtgcataatttttaagaaaatgaataattatgttgatttcaataatgaaat 4958658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 6494918 - 6494963
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacg 383  Q
    ||||||| || ||||||||||||||||| |||||||||||||||||    
T  6494918 atactccatccgtctctaaataatagtcgtttaaggtttatgcacg 6494963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 39452501 - 39452390
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    |||||||||||||||| ||||||||||   ||| ||  |||| ||||| ||||| | ||||||||| |||  |||||||| || |||||| ||||||||     
T  39452501 tctctaaataatagtcgtttaaggtttggacacaatctttaaaaaaataattaa-tatgttgattttaatggtaaaattaatatcatttactaaaatacc 39452403  T
Q  450 cttatttattgta 462  Q
    |||||| ||||||    
T  39452402 cttattaattgta 39452390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 502
Target Start/End: Original strand, 11373521 - 11373563
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    |||||||||||| |||||||||||| ||||| |||||||||||    
T  11373521 gtagttaagttggatgaaattcaataaataagagtataatagt 11373563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 502
Target Start/End: Original strand, 46478386 - 46478428
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    |||||||||||| |||||||||||| ||||| |||||||||||    
T  46478386 gtagttaagttggatgaaattcaataaataagagtataatagt 46478428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 442
Target Start/End: Original strand, 19060371 - 19060464
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttatta 442  Q
    ||||||||||||||||| ||||| |||| || |  ||| | ||  |||||||||||||||||||||| |||  |||||||| ||  ||||||||    
T  19060371 gtctctaaataatagtcgtttaaagtttgtgtataattttgaaagaaatgattaattgtgttgatttaaattgtaaaattaatattatttatta 19060464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 500
Target Start/End: Complemental strand, 48608903 - 48608862
Alignment:
Q  459 tgtagttaagttgaatgaaattcaatgaataatagtataata 500  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  48608903 tgtagttaagttggatgaaattcaataaataagagtataata 48608862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 500
Target Start/End: Original strand, 41506158 - 41506198
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataata 500  Q
    |||||||||||| |||||||||||| ||||| |||||||||    
T  41506158 gtagttaagttggatgaaattcaataaataagagtataata 41506198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 466
Target Start/End: Complemental strand, 42796094 - 42796050
Alignment:
Q  422 taaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||||| |||||||||||| || |||||| ||||||||||    
T  42796094 taaaattagtaacatttattaaaacacccttattaattgtagtta 42796050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 10179901 - 10180028
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||| || |||| |||||||||||  |||||||||||  ||||    
T  10179901 tactccctccgtctctaaaaaatagtcgtttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggtaaaattagtataattt 10180000  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| |||||| ||||||||||    
T  10180001 actaaaatacacttattaattgtagtta 10180028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 349 - 467
Target Start/End: Complemental strand, 32476439 - 32476321
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||| | |||| |||||||||| |||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| || |||||||||||||||    
T  32476439 gtctctaaattaaagtcgtttaaggtttgtgcacggttattaagaaaatgattgattctgttgatttcaatgataaaattaatatcatttattaaaatac 32476340  T
Q  449 tcttatttattgtagttaa 467  Q
     |||||| |||||||||||    
T  32476339 ccttattaattgtagttaa 32476321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 361 - 466
Target Start/End: Original strand, 1875568 - 1875673
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattg 460  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||||| || |||||| ||||    
T  1875568 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattg 1875667  T
Q  461 tagtta 466  Q
    ||||||    
T  1875668 tagtta 1875673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 39482778 - 39482650
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||  |||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||   |||||||||||| |||    
T  39482778 atactccctccgtctcacaatattagtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggtaaaattagtagaatt 39482679  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| || |||||| ||| ||||||    
T  39482678 tactaaaacacccttattaattatagtta 39482650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 45425620 - 45425747
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||| || |||||  |||| ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| |||  |||||||| || |||||    
T  45425620 tactccttccgtctcataatattagtcgtttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggtaaaattaataacattt 45425719  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    ||||||| | ||||||| ||||||||||    
T  45425720 attaaaacattcttattaattgtagtta 45425747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 11976890 - 11977017
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| ||||| |||||||||| |||| |||||||| | |||| |||||||||||||||||||||  || ||| ||||||||||    
T  11976890 tactccctccgtctcataatattagtcgtttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatggtataatcagtagcattt 11976989  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| |||||| ||||||||||    
T  11976990 actaaaatacccttattaattgtagtta 11977017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 351 - 466
Target Start/End: Complemental strand, 31271171 - 31271056
Alignment:
Q  351 ctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactc 450  Q
    |||||||| |||||| |||||||||| || ||||||||||||||||||||| ||||||||||||| |||  |||||||| || ||| || ||||||||||    
T  31271171 ctctaaattatagtcgtttaaggtttgtgtacgattattaagaaaatgattgattgtgttgattttaatggtaaaattaatatcatatactaaaatactc 31271072  T
Q  451 ttatttattgtagtta 466  Q
    ||||| ||| ||||||    
T  31271071 ttattaattatagtta 31271056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 364 - 466
Target Start/End: Original strand, 42972487 - 42972589
Alignment:
Q  364 tcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtag 463  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |||||||| || | |||| |||||||| |||||| ||| |||    
T  42972487 tcatttaaggtttgtgcacgattattaagaaaatgattaattgttttgatttcaatggtaaaattaatatcgtttactaaaatacccttattaattatag 42972586  T
Q  464 tta 466  Q
    |||    
T  42972587 tta 42972589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 51264 - 51148
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||  |||||| |||| ||||||  |||| ||    
T  51264 gtctctaaataatagttgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgattttaat-gtaaaataagtatcatttacaaaaacac 51166  T
Q  449 tcttatttattgtagtta 466  Q
      ||||| ||||||||||    
T  51165 atttattaattgtagtta 51148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 39405925 - 39405824
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || |||||  |||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||    
T  39405925 atactccatccgtctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcatt 39405826  T
Q  438 ta 439  Q
    ||    
T  39405825 ta 39405824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 350 - 466
Target Start/End: Complemental strand, 13335367 - 13335251
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    ||||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||  ||  ||||||||||| |||||| ||||| ||     
T  13335367 tctctaaataataatcgtttaaggtttatgcacgattattaaggaaatggttaattgtgttgattttgatggtaaaattagtatcatttagtaaaacaca 13335268  T
Q  450 cttatttattgtagtta 466  Q
     ||||| |||| |||||    
T  13335267 tttattaattgcagtta 13335251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 362 - 466
Target Start/End: Original strand, 21216078 - 21216182
Alignment:
Q  362 agtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgt 461  Q
    |||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||||  |||||||||| ||||||| ||||| |  |||||| |||||    
T  21216078 agtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagttgcatttactaaaacatccttattaattgt 21216177  T
Q  462 agtta 466  Q
    |||||    
T  21216178 agtta 21216182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 40996318 - 40996446
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || |||||||||||||| || |||||||||||||||| ||| ||||| ||||||||||||||||||||||  |   ||||||||||  ||||    
T  40996318 atactccatccgtctctaaataataatcgtttaaggtttatgcacaattgttaaggaaatgattaattgtgttgattttgaatgtaaaattagtttcatt 40996417  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| || |||||| ||||||||||    
T  40996418 tactaaaacacccttattaattgtagtta 40996446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 9300095 - 9300194
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| |||  |||||||| ||||||||| ||||| || |||||| ||| ||||||    
T  9300095 tttaaggtttatgcacgattattaagaaaatgattgtttgtgttgattttaatggtaaaattaatagcatttactaaaacacccttattaattttagtta 9300194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 10097945 - 10098072
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| || |||||||||||||| ||||||||| ||||| | ||||||||||||||||||||||| |||||||  ||  |||||||| || |||||    
T  10097945 tactccctccgtatctaaataatagtcgtttaaggttgatgcatggttattaagaaaatgattaattgtattgattttgatggtaaaattaatatcattt 10098044  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | || || || |||||| ||||||||||    
T  10098045 actataacacccttattaattgtagtta 10098072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 36967508 - 36967417
Alignment:
Q  354 taaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||  ||  |||||||| || |||||| |||||    
T  36967508 taaataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaa 36967417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 467
Target Start/End: Complemental strand, 7173065 - 7172948
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    ||||||||| |||||  |||||||||| || |  ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |      
T  7173065 tctctaaattatagttgtttaaggtttgtgtatcattattaaagaaatgattaattgtgttgatttcaatgataaaattagtagcatttactaaaacata 7172966  T
Q  450 cttatttattgtagttaa 467  Q
     ||||| |||||||||||    
T  7172965 tttattaattgtagttaa 7172948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 466
Target Start/End: Original strand, 26626088 - 26626193
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattg 460  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||  ||  ||||||| |||  |||||||||||||  |||||| ||||    
T  26626088 tagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttattaaaatatccttattaattg 26626187  T
Q  461 tagtta 466  Q
    ||||||    
T  26626188 tagtta 26626193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 350 - 466
Target Start/End: Original strand, 4428317 - 4428432
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    |||| ||||||||||| ||||||||||||| |  ||| ||||||||||||||| |||||||||||| ||| ||||||||| || |||||| ||||||||     
T  4428317 tctcaaaataatagtcgtttaaggtttatgtat-atttttaagaaaatgattatttgtgttgattttaatgataaaattattatcatttactaaaataca 4428415  T
Q  450 cttatttattgtagtta 466  Q
     ||||| ||||||||||    
T  4428416 attattaattgtagtta 4428432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 349 - 467
Target Start/End: Original strand, 34393918 - 34394036
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||||||||||||||| ||||| ||| ||||||| |||||||| ||||||||||||||||||||||  ||  |||||||||||  ||||| ||||| ||    
T  34393918 gtctctaaataatagtcgtttaaagttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtataatttactaaaacac 34394017  T
Q  449 tcttatttattgtagttaa 467  Q
      ||||| ||| |||||||    
T  34394018 ctttattaattatagttaa 34394036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 466
Target Start/End: Original strand, 17719222 - 17719339
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||||||  |||||| |||  |||| ||||||  ||||| |||||||     
T  17719222 gtctctaaataatagtcgtttaagatttgtgcacgattattaaaaaaatgattaattgtaatgattttaatggtaaagttagtattatttactaaaatat 17719321  T
Q  449 tcttatttattgtagtta 466  Q
     |||||| ||| ||||||    
T  17719322 ccttattaattatagtta 17719339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 466
Target Start/End: Original strand, 22771799 - 22771916
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||||||||||||  || ||||||||||||||||  |||||||| || |||||||||| ||||||||  ||  ||||||||||  |||||||||||| ||    
T  22771799 gtctctaaataattatcgtttaaggtttatgcacagttattaaggaattgattaattgggttgattttgatggtaaaattagtgtcatttattaaaacac 22771898  T
Q  449 tcttatttattgtagtta 466  Q
     |||||| ||||||||||    
T  22771899 ccttattaattgtagtta 22771916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 415
Target Start/End: Complemental strand, 32678869 - 32678804
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||||||||||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  32678869 tctctaaataatagtcgtttaaagtttatacacgattattaaggaaatgattaattgtgttgattt 32678804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 41092114 - 41092029
Alignment:
Q  381 acgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||| ||||  ||| ||||||||||||||||||||||  |||||||| || |||||||||||||||||||||| ||||||||||    
T  41092114 acgatttttaaagaaacgattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatactcttattaattgtagtta 41092029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 2767244 - 2767372
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||| | ||||||||||| ||||  ||| ||||| ||||||| |||||||| |||| |||||||||||||||||  ||  ||||||||||| ||||    
T  2767244 atactccccccgtctctaaatagtagttgtttgaggttgatgcacggttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatt 2767343  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    |||||||| |  ||||||  |||||||||    
T  2767344 tattaaaacatccttattatttgtagtta 2767372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 31231893 - 31231765
Alignment:
Q  339 tactccctctgtctctaaataatagtcattt-aaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||||| ||||||||||||||||| ||| |||||| ||||||| |||||||| ||||||| |||||||| |||||  ||  |||||||| || ||||    
T  31231893 tactccctccgtctctaaataatagtcttttaaaggttgatgcacggttattaaggaaatgatgaattgtgtcgattttgatggtaaaattaatatcatt 31231794  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || | ||| || |||||| ||||||||||    
T  31231793 tactgaaacacccttattaattgtagtta 31231765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 44761503 - 44761575
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| ||||| || |||||| ||||||||||    
T  44761503 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagtta 44761575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 357 - 455
Target Start/End: Original strand, 7703128 - 7703226
Alignment:
Q  357 ataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    ||||||||| ||||| |||| || | |||||||||| |||| |||||||||||||||||||||  |||||||| || |||||| |||||||| ||||||    
T  7703128 ataatagtcgtttaaagtttgtgtaagattattaaggaaataattaattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttatt 7703226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 465
Target Start/End: Complemental strand, 33765794 - 33765696
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtt 465  Q
    |||||||||| ||||| ||| ||||| |||||||||||| ||||||||| |||| |||||||| || |||||| ||| ||||| ||||| |||||||||    
T  33765794 tttaaggtttgtgcacaatttttaaggaaatgattaattatgttgattttaatactaaaattactatcatttactaatatacttttattaattgtagtt 33765696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 366 - 459
Target Start/End: Complemental strand, 39329154 - 39329061
Alignment:
Q  366 atttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttatt 459  Q
    ||||||| ||| || || ||| ||||||||||||||||||||||| |||| ||| |||||||||||| | ||| ||||||||| ||||||||||    
T  39329154 atttaagttttgtgtacaatttttaagaaaatgattaattgtgttaattttaatgataaaattagtatcgttttttaaaatacccttatttatt 39329061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 439
Target Start/End: Original strand, 34948641 - 34948741
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||| || |||| | ||||||| || |||||| ||| | ||| ||||||||| |||||||||||||||||||||| |||| ||||||||||| |||||    
T  34948641 tactccatccgtctttgaataataatcgtttaagatttgtacacaattattaaggaaatgattaattgtgttgatttaaatagtaaaattagtatcattt 34948740  T
Q  439 a 439  Q
    |    
T  34948741 a 34948741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 31082753 - 31082654
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||| ||||| |||||||| |||||| |||||||||||||| ||||||| ||| ||||||||||| | ||||| ||||| || |||||| ||| ||||||    
T  31082753 tttatggtttgtgcacgataattaaggaaatgattaattgtcttgattttaatgataaaattagtggtatttactaaaacacccttattaattatagtta 31082654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 441
Target Start/End: Original strand, 6795999 - 6796101
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||| ||||| |||||| ||||| |||| |||||||||||||| |||||||||||  | |||||||| |||  |||||||| || |||||    
T  6795999 tactccctccgtctttaaattatagtcgtttaatgtttgtgcacgattattaataaaatgattaacagcgttgattttaatggtaaaattaatatcattt 6796098  T
Q  439 att 441  Q
    |||    
T  6796099 att 6796101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 9839791 - 9839889
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||| ||||||||||| ||||| ||||||  || ||| ||||| |||||||||| ||| ||||||||||  ||||||||||||  ||||||||||||||    
T  9839791 tctcaaaataatagtcgtttaatgtttatatacaatttttaaggaaatgattaaatgttttgatttcaacgataaaattagtattatttattaaaatac 9839889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 432
Target Start/End: Complemental strand, 1739798 - 1739709
Alignment:
Q  343 ccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||| ||||||  |||| ||||| | |||||||| || |||||||||||| |||| |||||||||||||||||||||  |||||||||||    
T  1739798 ccctatgtctcacaatattagtcgtctaaggtttgtgtacgattattaaggaaataattaattgtgttgatttcaatggtaaaattagta 1739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 42887104 - 42887035
Alignment:
Q  397 tgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||||||||||||||||||||||  |||||||||| |||||| ||||||||  ||||| ||||||||||    
T  42887104 tgattaattgtgttgatttcaatagcaaaattagtatcatttactaaaatacctttattaattgtagtta 42887035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 6611842 - 6611767
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagt 431  Q
    |||| ||||| |||||| ||||  |||||||||||| ||||||||||||| |||||||||||||  ||||||||||    
T  6611842 aatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 6611767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 447
Target Start/End: Complemental strand, 40028632 - 40028570
Alignment:
Q  384 attattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    |||||||| ||||||||||||| |||||||||||||  |||||||| |||||||||||||||||    
T  40028632 attattaa-aaaatgattaattatgttgatttcaatggtaaaattaatagcatttattaaaata 40028570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 385 - 467
Target Start/End: Original strand, 396611 - 396693
Alignment:
Q  385 ttattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    |||||||| |||||||||||| ||||||||||||   ||||||||||| |||||| || ||||  |||||| |||||||||||    
T  396611 ttattaaggaaatgattaattatgttgatttcaacggtaaaattagtatcatttactacaatatccttattaattgtagttaa 396693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 381 - 447
Target Start/End: Complemental strand, 12559712 - 12559647
Alignment:
Q  381 acgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||| || |||||| |||||||    
T  12559712 acgatttttaagaaa-tgattaattgtgttgattttaataataaaattaataccatttactaaaata 12559647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 382 - 439
Target Start/End: Original strand, 10953405 - 10953462
Alignment:
Q  382 cgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattta 439  Q
    ||||||||||| |||||||||||||||||||||| ||| ||| ||||| |||||||||    
T  10953405 cgattattaaggaaatgattaattgtgttgattttaatgatataattaatagcattta 10953462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 382 - 439
Target Start/End: Original strand, 10961410 - 10961467
Alignment:
Q  382 cgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattta 439  Q
    ||||||||||| |||||||||||||||||||||| ||| ||| ||||| |||||||||    
T  10961410 cgattattaaggaaatgattaattgtgttgattttaatgatataattaatagcattta 10961467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 27294012 - 27294121
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || ||||| ||||||||||   ||||||||| ||||||||| ||||  || | |||||||||||| |||| ||| |||||||||||| | ||    
T  27294012 atactccttcggtctcaaaataatagttggttaaggtttgtgcacgatttttaaagaagttattaattgtgttcatttgaatgataaaattagtatcttt 27294111  T
Q  438 tattaaaata 447  Q
    || |||||||    
T  27294112 tactaaaata 27294121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 29226213 - 29226278
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||  ||  |||||||||||    
T  29226213 tttaagatttatgcataattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 29226278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 39890728 - 39890667
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||||| ||||| | |||||||    
T  39890728 aaatgattagttgagttgacttcaataataaaattagtagcatttactaaaacattcttatt 39890667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 14854916 - 14855015
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||| | ||||||||| |||||||||| | ||||||||||||| |||  |||||||| | ||||||  ||||| ||  ||||| ||||||||||    
T  14854916 tttaaggtttgtacacgattatcaagaaaatgaatcattgtgttgattttaatggtaaaattaattgcatttgctaaaacacctttattaattgtagtta 14855015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 5053156 - 5053234
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||| ||||||||||||||||||||||  ||  |||||||| || |||||| ||||| | ||||||| ||||||||||    
T  5053156 ttaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacagtcttattaattgtagtta 5053234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 9550057 - 9549999
Alignment:
Q  369 taaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaat 427  Q
    |||| |||||||||||| |||||  |||||||||||||||||||||| ||| |||||||    
T  9550057 taagatttatgcacgataattaatgaaatgattaattgtgttgattttaatgataaaat 9549999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 31331521 - 31331443
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||| |||||||||||||| ||||||||||| ||||||||| ||  ||||| |||||||   ||||| ||||||||||    
T  31331521 ttaaggaaatgattaattgtattgatttcaattataaaattattattatttactaaaatatcattattaattgtagtta 31331443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 462
Target Start/End: Original strand, 39300912 - 39301018
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||| ||| || |||||||||||  |||||||||||| |||||||||| ||  |||||||| || |||||| ||||| || || |||    
T  39300912 aatagtagtcgtttaagatttgtgtacgattattaaagaaatgattaattatgttgatttcgatggtaaaattaatatcatttactaaaaaaccctaatt 39301011  T
Q  456 tattgta 462  Q
     ||||||    
T  39301012 aattgta 39301018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 428
Target Start/End: Complemental strand, 39329431 - 39329370
Alignment:
Q  366 atttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaatt 428  Q
    ||||||| ||| ||||| ||| |||||||| ||||||||||||||||||||||| ||||||||    
T  39329431 atttaagttttgtgcacaatttttaagaaa-tgattaattgtgttgatttcaatgataaaatt 39329370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 502
Target Start/End: Complemental strand, 17823950 - 17823908
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    |||||||||||| |||||||| ||| |||||||||||||||||    
T  17823950 gtagttaagttggatgaaattaaataaataatagtataatagt 17823908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 17824022 - 17823956
Alignment:
Q  400 ttaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||| |||||||||||||| |||||||||||| | |||| || |||||  ||||| ||||||||||    
T  17824022 ttaatcgtgttgatttcaatgataaaattagtatcttttactagaatacctttattaattgtagtta 17823956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 21649320 - 21649386
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtag 433  Q
    |||||||||| || || ||| ||||||||||| |||||| |||||||| |||| |||||| ||||||    
T  21649320 tttaaggtttgtgtacaatttttaagaaaatgtttaattatgttgattccaatgataaaactagtag 21649386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 34057626 - 34057680
Alignment:
Q  393 aaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    ||||| ||||||| |||||||||||||||||||| |||||  ||||| |||||||    
T  34057626 aaaataattaattatgttgatttcaataataaaactagtattatttactaaaata 34057680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 39465809 - 39465839
Alignment:
Q  385 ttattaagaaaatgattaattgtgttgattt 415  Q
    |||||||||||||||||||||||||||||||    
T  39465809 ttattaagaaaatgattaattgtgttgattt 39465839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 5356706 - 5356634
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaa 467  Q
    ||||||||| |||||||||||| ||| ||||||||| || |||||| |||  |||| ||||| |||||||||||    
T  5356706 aaatgattagttgtgttgattttaatgataaaattaatatcatttactaatgtact-ttattaattgtagttaa 5356634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 500
Target Start/End: Original strand, 10180034 - 10180074
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataata 500  Q
    ||||||||||||||||||||||||| |||||  ||||||||    
T  10180034 gtagttaagttgaatgaaattcaattaataagtgtataata 10180074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 364 - 419
Target Start/End: Complemental strand, 15249736 - 15249678
Alignment:
Q  364 tcatttaaggtttatgcacgattattaagaaa---atgattaattgtgttgatttcaat 419  Q
    ||||||||||||| ||||||||| |||| |||   || |||||||||||||||||||||    
T  15249736 tcatttaaggtttgtgcacgatttttaataaagaaataattaattgtgttgatttcaat 15249678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 500
Target Start/End: Original strand, 39301043 - 39301083
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataata 500  Q
    |||||| |||||||||||||||||| ||||| |||||||||    
T  39301043 gtagttcagttgaatgaaattcaataaataaaagtataata 39301083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 11655898 - 11656025
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||  ||||||||||  |||||    
T  11655898 tactccctccgtctctaaataagagtcgtttaaggtttatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattagtgtcattt 11655997  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  11655998 actaaaacacccttattaattgtagtta 11656025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 15058279 - 15058152
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||||||||  |||| ||||| |||||||||| ||||||||||||||||||||||||||||  ||| ||||||||  |||||||||| ||||||    
T  15058279 tactccctctgtctcgcaatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattaagttaatttcaatggtaaaattagtggcattt 15058180  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| |||||| ||||||||||    
T  15058179 actaaaatacccttattaattgtagtta 15058152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 339 - 463
Target Start/End: Complemental strand, 23142829 - 23142705
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||| ||||||    
T  23142829 tactccctccgtctcacaatattagttatttaaggtttatccacgattattaagaaaatgattaattgtgttgatttcaatggtaaaaatagtggcattt 23142730  T
Q  439 attaaaatactcttatttattgtag 463  Q
    | ||||| || |||||| |||||||    
T  23142729 actaaaacacccttattaattgtag 23142705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 29363469 - 29363341
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||  ||  ||||| ||||| ||||    
T  29363469 atactccctccgtctttaaataatagtcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaactagtatcatt 29363370  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| |  |||||| ||||||||||    
T  29363369 tactaaaacatccttattaattgtagtta 29363341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 1781936 - 1781837
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||  |||||||||||||||||| ||||| || |||||| ||||||||||    
T  1781936 tttaaggtttatgcacgattgttaagaaaatgattaattatgttgatctcaatggtaaaattagtagcatttactaaaacacccttattaattgtagtta 1781837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 356 - 466
Target Start/End: Original strand, 3720210 - 3720320
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||| |||| |||||  |||| |||||||||    
T  3720210 aatattagtcgtttaaggtttgtgcacgattattaatgaaatgattaattgtgttgatttcaattataaaatttgtagtatttacaaaaacactcttatt 3720309  T
Q  456 tattgtagtta 466  Q
     ||||||||||    
T  3720310 aattgtagtta 3720320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 349 - 466
Target Start/End: Original strand, 1955941 - 1956058
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    ||||| ||||||||||| |||||||||||| |||  | |||||||||| |||||||||| |||||||||||  ||||||||||| |||||| ||| ||||    
T  1955941 gtctcaaaataatagtcgtttaaggtttatacacagtaattaagaaaaagattaattgtattgatttcaatggtaaaattagtatcatttactaatatac 1956040  T
Q  449 tcttatttattgtagtta 466  Q
    ||||||| ||||||||||    
T  1956041 tcttattaattgtagtta 1956058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 13087693 - 13087565
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||||||||| |||| ||||||||| ||  ||||||||||||||| |||||||||||||||||||||||  |||||||| || ||||    
T  13087693 atactccctccgtctctaaataaaagtcgtttaaggttcataaacgattattaagaaagtgattaattgtgttgatttcaatggtaaaattaatatcatt 13087594  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| |  |||||| ||| ||||||    
T  13087593 tactaaaacatccttattaattatagtta 13087565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 338 - 462
Target Start/End: Original strand, 32440596 - 32440720
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||| ||||| || ||||||||||||||||||||||  ||  |||||||||||  |||    
T  32440596 atactccctccgtctctaaataatagtcgtttaagatttatgcacggttatttaggaaatgattaattgtgttgattttgatggtaaaattagtattatt 32440695  T
Q  438 tattaaaatactcttatttattgta 462  Q
    || ||||| || |||||| ||||||    
T  32440696 tactaaaacacccttattaattgta 32440720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 3291720 - 3291847
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||| || ||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| | ||||| |||  ||| |||||||  ||||    
T  3291720 tactccatcggtctctaaataatagtcgtttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggtaatattagtattattt 3291819  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||||||  ||||| ||||||||||    
T  3291820 actaaaatacctttattaattgtagtta 3291847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 338 - 467
Target Start/End: Complemental strand, 21010340 - 21010211
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||| |||| || |||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| ||||  ||   |||||||||| ||||    
T  21010340 atacttcctccgtttctaaataatagttgtttaaggtttatgcacaattattaagaaaatgattaattgtgttaattttgatggaaaaattagtatcatt 21010241  T
Q  438 tattaaaatactcttatttattgtagttaa 467  Q
    || ||||| || |||||  |||||||||||    
T  21010240 tactaaaacacccttataaattgtagttaa 21010211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 346 - 466
Target Start/End: Original strand, 1063562 - 1063682
Alignment:
Q  346 tctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    ||||| || ||||| ||||| ||||| ||||||| |  ||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||    
T  1063562 tctgtatcaaaatagtagtcgtttaaagtttatgtataatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaa 1063661  T
Q  446 tactcttatttattgtagtta 466  Q
    |||||| | | ||||||||||    
T  1063662 tactctgagtaattgtagtta 1063682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 6834320 - 6834448
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| || |||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||  ||| | |||||| || ||||    
T  6834320 atactccctccgtttctaaataatagttctttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatt 6834419  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| ||  ||||| ||| ||||||    
T  6834420 tactaaaacacctttattaattatagtta 6834448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 13909558 - 13909459
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||| |||| ||||||||||||||| |||||||||| |||||||||||||||  ||||||||||  |||||| |||||||| |||||| ||||||||||    
T  13909558 tttaaagtttgtgcacgattattaaggaaatgattaaatgtgttgatttcaatggtaaaattagtgacatttactaaaatacccttattaattgtagtta 13909459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 338 - 445
Target Start/End: Original strand, 31894161 - 31894268
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| |||||  |||| || || |||||| ||| || | |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  31894161 atactccctccgtctcacaatattaatcgtttaagatttgtgtatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatt 31894260  T
Q  438 tattaaaa 445  Q
    || |||||    
T  31894261 tactaaaa 31894268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 344 - 445
Target Start/End: Original strand, 27448113 - 27448214
Alignment:
Q  344 cctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaa 443  Q
    |||| |||||||||||||| || |||||||||| ||||| ||||||||| ||||||||||||||||||||||  || || ||||||||| |||||| |||    
T  27448113 cctccgtctctaaataataatcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaa 27448212  T
Q  444 aa 445  Q
    ||    
T  27448213 aa 27448214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 6802093 - 6801966
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||  |||||||||||||||| |||||| || ||||| | ||||||||||||||||||||| |||||||||  ||  |||||||| || |||||    
T  6802093 tactccctccatctctaaataatagtcgtttaagattgatgcatggttattaagaaaatgattaattatgttgattttgatggtaaaattaatatcattt 6801994  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||  | |||||| ||||||||||    
T  6801993 actaaaacgcccttattaattgtagtta 6801966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 347 - 466
Target Start/End: Complemental strand, 7920392 - 7920274
Alignment:
Q  347 ctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaat 446  Q
    ||||||| ||||||||  | |||||| ||| ||||||||| ||||  |||||||||||| |||||||||||||  ||||||||  | |||||| ||||||    
T  7920392 ctgtctcaaaataatatccgtttaagatttgtgcacgatttttaaagaaatgattaattttgttgatttcaatggtaaaattaaaaccatttactaaaat 7920293  T
Q  447 actcttatttattgtagtta 466  Q
    | ||||||| ||||||||||    
T  7920292 a-tcttattaattgtagtta 7920274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 445
Target Start/End: Complemental strand, 181700 - 181612
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    |||| ||||| | ||||||||  ||||||||||||| ||||| ||||||||| |||||||||||| |||||||||||| ||||| |||||    
T  181700 aatattagtcgtctaaggtttgagcacgattattaaaaaaat-attaattgtattgatttcaatagtaaaattagtagtatttactaaaa 181612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 27823416 - 27823307
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagttaagttgaatgaaattcaatgaa 487  Q
    |||||||||| |||| ||| ||| || ||||||||||||| |||  |||||||||||| ||| ||||| |||||||||||||| | ||| ||| ||| ||    
T  27823416 ttaagaaaataattagttgagttaatctcaataataaaatgagtttcatttattaaaacacttttattaattgtagttaagttaagtgacatttaataaa 27823317  T
Q  488 taatagtata 497  Q
    ||| ||||||    
T  27823316 taaaagtata 27823307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 15582389 - 15582318
Alignment:
Q  395 aatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||||||||  |||||| |||| |||||||||||||||  ||| || |||||||||    
T  15582389 aatgattaattgtgttgatttcaatggtaaaatcagtatcatttattaaaatacatttacttgttgtagtta 15582318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 466
Target Start/End: Complemental strand, 30717050 - 30716935
Alignment:
Q  351 ctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactc 450  Q
    ||||||||||||||| |||||| || ||||||  |||||||| |||||||||||| | |||| ||  ||  ||||||||||| |||||| | ||| || |    
T  30717050 ctctaaataatagtcgtttaagattgatgcacagttattaaggaaatgattaattttattgactttgatggtaaaattagtatcatttacttaaacaccc 30716951  T
Q  451 ttatttattgtagtta 466  Q
    ||||| ||||||||||    
T  30716950 ttattaattgtagtta 30716935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 1225154 - 1225082
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||||| |||| |||||||| ||  ||||| ||||||| ||||||| ||| ||||||    
T  1225154 aaatgattaattgtgttgatttaaatagtaaaattaatattatttactaaaatattcttattaattttagtta 1225082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 24983444 - 24983528
Alignment:
Q  382 cgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    ||||| ||||| ||||||||| ||| ||||||||||||  ||||||||||  |||||| ||||| || |||||| ||||||||||    
T  24983444 cgattcttaaggaaatgattagttgagttgatttcaatggtaaaattagtgtcatttactaaaacacccttattaattgtagtta 24983528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 446
Target Start/End: Original strand, 28101318 - 28101418
Alignment:
Q  346 tctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    ||||||| |||||||||||| |||||  ||||| ||  ||| |||||| ||  ||| ||| ||||||||||||| |||||||||||| |||||| |||||    
T  28101318 tctgtctttaaataatagtcgtttaaaatttatacataatttttaagagaagtatttattatgttgatttcaatgataaaattagtatcatttactaaaa 28101417  T
Q  446 t 446  Q
    |    
T  28101418 t 28101418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 368 - 415
Target Start/End: Complemental strand, 5302484 - 5302437
Alignment:
Q  368 ttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 415  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  5302484 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattt 5302437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 455
Target Start/End: Complemental strand, 2423736 - 2423664
Alignment:
Q  383 gattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    ||||||| ||||||||||||||  ||||||||| |||  ||||||  ||| |||||||||||| |||||||||    
T  2423736 gattattcagaaaatgattaatattgttgattttaatggtaaaatatgtatcatttattaaaacactcttatt 2423664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 17835492 - 17835420
Alignment:
Q  393 aaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtt 465  Q
    ||||| ||||||||| ||||||| ||||||||||||| |  |||||| ||||||||  ||||| |||||||||    
T  17835492 aaaataattaattgtattgattttaataataaaattaatctcatttactaaaatacatttattaattgtagtt 17835420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 21804536 - 21804607
Alignment:
Q  394 aaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||| || ||||||||  ||||||||||| |||||| | ||||| ||||||| ||||||||||    
T  21804536 aaatgattaattgtattaatttcaattgtaaaattagtatcatttacttaaata-tcttattaattgtagtta 21804607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 27367427 - 27367494
Alignment:
Q  378 tgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    ||||||||||||||  |||||||||||||||||||||| | |  |||||||| | ||||||| |||||    
T  27367427 tgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaa 27367494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 27457774 - 27457841
Alignment:
Q  378 tgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaa 445  Q
    ||||||||||||||  |||||||||||||||||||||| | |  |||||||| | ||||||| |||||    
T  27457774 tgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaa 27457841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 448
Target Start/End: Complemental strand, 7072299 - 7072213
Alignment:
Q  362 agtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatac 448  Q
    |||| |||||||||| || |  ||| |||||||||| ||||||||||||||||| |||  ||||||||||  |||||| | ||||||    
T  7072299 agtcgtttaaggtttgtgtataatttttaagaaaataattaattgtgttgattttaatggtaaaattagtgtcatttactgaaatac 7072213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 502
Target Start/End: Original strand, 28106014 - 28106056
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    ||||||||||||||||||||||||| ||||||  |||||||||    
T  28106014 gtagttaagttgaatgaaattcaataaataatgatataatagt 28106056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 502
Target Start/End: Original strand, 3720327 - 3720368
Alignment:
Q  461 tagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    |||||||||||||||||||||| | ||||| |||||||||||    
T  3720327 tagttaagttgaatgaaattcagtaaataagagtataatagt 3720368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 466
Target Start/End: Original strand, 8115072 - 8115117
Alignment:
Q  421 ataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||||    
T  8115072 ataaaattagtatcatttactaaaatactcttattaattttagtta 8115117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 425
Target Start/End: Complemental strand, 12340080 - 12340035
Alignment:
Q  380 cacgattattaagaaaatgattaattgtgttgatttcaataataaa 425  Q
    ||||||||||||||||||||||| | |||||||||| ||| |||||    
T  12340080 cacgattattaagaaaatgattagtagtgttgattttaatgataaa 12340035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 16406798 - 16406831
Alignment:
Q  399 attaattgtgttgatttcaataataaaattagta 432  Q
    ||||||||||||||||||||| ||||||||||||    
T  16406798 attaattgtgttgatttcaatgataaaattagta 16406831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 4590610 - 4590658
Alignment:
Q  399 attaattgtgttgatttcaataataaaattagtagcatttattaaaata 447  Q
    |||||||||||||||||||||| |||||||| || | |||| |||||||    
T  4590610 attaattgtgttgatttcaatagtaaaattaatatcgtttactaaaata 4590658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 2187 - 2060
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||||||||| |||| ||||||||| |||||||||||||||| || |||||||||||||| |||||||| ||||||||| || |||||    
T  2187 tactccctccgtctctaaataaaagtcgtttaaggttcatgcacgattattaaggaagtgattaattgtgttaatttcaatgataaaattaatatcattt 2088  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| |  |||||| ||||||||||    
T  2087 actaaaacatccttattaattgtagtta 2060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 356 - 467
Target Start/End: Complemental strand, 17180 - 17069
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatt 455  Q
    |||| ||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| || || ||||||    
T  17180 aatattagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttattagaacacccttatt 17081  T
Q  456 tattgtagttaa 467  Q
     ||| |||||||    
T  17080 aattatagttaa 17069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 33972 - 34099
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||| |||| |||||  |||| |||||||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||| |||||||||| ||||||    
T  33972 tacttcctccgtctcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcattt 34071  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||||||||||    
T  34072 actaaaacacccttattaattgtagtta 34099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 502
Target Start/End: Original strand, 34106 - 34147
Alignment:
Q  461 tagttaagttgaatgaaattcaatgaataatagtataatagt 502  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  34106 tagttaagttggatgaaattcaataaataatggtataatagt 34147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 337 - 467
Target Start/End: Complemental strand, 16262 - 16132
Alignment:
Q  337 catactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcat 436  Q
    ||||| ||||| |||||  |||| ||||  |||||| ||| | ||||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||    
T  16262 cataccccctccgtctcacaatattagtagtttaagatttgttcacgattattaaggaaatgattaattgtgttgattttaatgataaaattaatagcat 16163  T
Q  437 ttattaaaatactcttatttattgtagttaa 467  Q
    ||| ||||| || |||||| |||||||||||    
T  16162 ttactaaaacacacttattaattgtagttaa 16132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 50367 - 50266
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||||| || |||||  |||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||    
T  50367 atactccatccgtctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcatt 50268  T
Q  438 ta 439  Q
    ||    
T  50267 ta 50266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 22692 - 22662
Alignment:
Q  385 ttattaagaaaatgattaattgtgttgattt 415  Q
    |||||||||||||||||||||||||||||||    
T  22692 ttattaagaaaatgattaattgtgttgattt 22662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 1769 - 1897
Alignment:
Q  338 atactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    |||||||||| || |||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||  ||| | |||||| || ||||    
T  1769 atactccctccgtttctaaataatagttctttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatt 1868  T
Q  438 tattaaaatactcttatttattgtagtta 466  Q
    || ||||| ||  ||||| ||| ||||||    
T  1869 tactaaaacacctttattaattatagtta 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 20306 - 20433
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    |||||||||  |||||||||||||||  ||||||| || |||| |||||||||  ||||||||||||||||||||||  ||  ||||||||||| |||||    
T  20306 tactccctccatctctaaataatagtactttaagggttgtgcaagattattaattaaatgattaattgtgttgattttgattgtaaaattagtatcattt 20405  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | |||||||| |||||| |||| |||||    
T  20406 agtaaaatacccttattaattgcagtta 20433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 1868 - 1741
Alignment:
Q  337 catactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcat 436  Q
    |||||||||||  |||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||| |||||||||  ||  ||||||||||| |||    
T  1868 catactccctccatctctaaataatagtcgtttaagatttatacacggttattaagaaaatgattaattatgttgattttgatggtaaaattagtatcat 1769  T
Q  437 ttattaaaatactcttatttattgtagt 464  Q
    ||| | ||| || | |||| ||||||||    
T  1768 ttacttaaacacccgtattaattgtagt 1741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 135990 - 136117
Alignment:
Q  339 tactccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcattt 438  Q
    ||||||||| |||||  |||| ||||| |||||| ||||||||||||||||||  |||||||||||  |||||||||||||  |||||||| ||||||||    
T  135990 tactccctccgtctcacaatattagtcgtttaagatttatgcacgattattaaataaatgattaataatgttgatttcaatggtaaaattaatagcattt 136089  T
Q  439 attaaaatactcttatttattgtagtta 466  Q
    | ||||| || |||||| ||| ||||||    
T  136090 actaaaacacccttattaattatagtta 136117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 1e-21; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 344 - 445
Target Start/End: Complemental strand, 39245 - 39144
Alignment:
Q  344 cctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaa 443  Q
    |||| |||||||||||||| || |||||||||| ||||| ||||||||| ||||||||||||||||||||||  || || ||||||||| |||||| |||    
T  39245 cctccgtctctaaataataatcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaa 39146  T
Q  444 aa 445  Q
    ||    
T  39145 aa 39144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 252492 - 252575
Alignment:
Q  349 gtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagta 432  Q
    |||||||||| |||||| ||||||||||  | | |||||||||  |||||||||||| ||||||||| |||  |||||||||||    
T  252492 gtctctaaattatagtcgtttaaggtttgcgtatgattattaaagaaatgattaattatgttgattttaatggtaaaattagta 252575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 460 - 500
Target Start/End: Original strand, 252890 - 252930
Alignment:
Q  460 gtagttaagttgaatgaaattcaatgaataatagtataata 500  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  252890 gtagttaagttgaatgaaattcaataaataagagtataata 252930  T

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Target: scaffold0012 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 105818 - 105719
Alignment:
Q  367 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||| |||||||| |||||||||| ||||||||||||||||| ||||||||  |||||||| |||| |||| ||||| || |||||| ||||||||||    
T  105818 tttaagatttatgcatgattattaagtaaatgattaattgtgtttatttcaatggtaaaattaatagcgtttactaaaacacccttattaattgtagtta 105719  T

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Target: scaffold0330 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 350 - 466
Target Start/End: Complemental strand, 5541 - 5425
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaatact 449  Q
    ||||||||| ||| || |||||||||| | || ||||||||||||||||||||| |||||||| ||||||  |||||||| || |||||| |||||||      
T  5541 tctctaaattataatcgtttaaggtttgtacatgattattaagaaaatgattaactgtgttgaattcaatggtaaaattaatatcatttactaaaatatc 5442  T
Q  450 cttatttattgtagtta 466  Q
    |||||| ||| ||||||    
T  5441 cttattaattttagtta 5425  T

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Target: scaffold0328 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 466
Target Start/End: Original strand, 7938 - 8061
Alignment:
Q  343 ccctctgtctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttatta 442  Q
    ||||| ||||||||||||||||| |||| |||| ||||||| |||||||| |||||||||||| |||||||||  ||  |||||||| ||  |||||  |    
T  7938 ccctccgtctctaaataatagtcgtttacggttgatgcacggttattaaggaaatgattaattttgttgatttggatggtaaaattaatattatttacca 8037  T
Q  443 aaatactcttatttattgtagtta 466  Q
    ||| || |||||| ||||||||||    
T  8038 aaacacccttattaattgtagtta 8061  T

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Target: scaffold0470 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 1130 - 1055
Alignment:
Q  356 aataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagt 431  Q
    |||| ||||| |||||| ||||  |||||||||||| ||||||||||||| |||||||||||||  ||||||||||    
T  1130 aatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 1055  T

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Target: scaffold0464 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 437
Target Start/End: Original strand, 6260 - 6336
Alignment:
Q  361 tagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatt 437  Q
    ||||| ||||| |||| ||||||||| ||||  |||||||||||||||||||||  ||| |||||||||||| ||||    
T  6260 tagtcgtttaaagtttgtgcacgatttttaacgaaatgattaattgtgttgattctaatgataaaattagtatcatt 6336  T

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Target: scaffold0188 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 446
Target Start/End: Complemental strand, 6888 - 6792
Alignment:
Q  350 tctctaaataatagtcatttaaggtttatgcacgattattaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttattaaaat 446  Q
    |||| |||||| |||  |||||||||| |||  |||| ||||| |||||||||||||| || |||||||| ||||||||||||  ||||| ||||||    
T  6888 tctcaaaataacagttgtttaaggtttgtgcgtgatttttaaggaaatgattaattgttttaatttcaatgataaaattagtattatttactaaaat 6792  T

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Target: scaffold1809 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 697 - 764
Alignment:
Q  399 attaattgtgttgatttcaataataaaattagtagcatttattaaaatactcttatttattgtagtta 466  Q
    |||||||||||||||||||||  |||||||| ||||||||| ||||| ||  ||||| ||||||||||    
T  697 attaattgtgttgatttcaatggtaaaattaatagcatttactaaaacacctttattgattgtagtta 764  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 143944 - 143890
Alignment:
Q  387 attaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttatt 441  Q
    |||||| |||| ||||||||||||||| |||||  |||||||||| |||||||||    
T  143944 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttatt 143890  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 14172 - 14224
Alignment:
Q  388 ttaagaaaatgattaattgtgttgatttcaataataaaattagtagcatttat 440  Q
    |||| ||||||||||| ||||||||||| |||  ||||||||||| |||||||    
T  14172 ttaataaaatgattaaatgtgttgattttaatcgtaaaattagtatcatttat 14224  T

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