View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20496_low_45 (Length: 313)

Name: NF20496_low_45
Description: NF20496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20496_low_45
NF20496_low_45
[»] chr8 (60 HSPs)
chr8 (150-266)||(6850304-6850420)
chr8 (45-104)||(15726237-15726296)
chr8 (45-104)||(29773445-29773504)
chr8 (2-45)||(4854921-4854964)
chr8 (45-104)||(14498650-14498709)
chr8 (45-104)||(36002356-36002415)
chr8 (1-46)||(37038477-37038522)
chr8 (45-105)||(28090191-28090251)
chr8 (45-109)||(37511083-37511147)
chr8 (45-105)||(43049536-43049596)
chr8 (45-104)||(945976-946035)
chr8 (1-44)||(15048238-15048281)
chr8 (45-104)||(19718698-19718757)
chr8 (1-44)||(20074991-20075034)
chr8 (45-104)||(23286565-23286624)
chr8 (45-104)||(29229524-29229583)
chr8 (45-104)||(38502184-38502243)
chr8 (45-108)||(44934895-44934958)
chr8 (1-43)||(5957831-5957873)
chr8 (45-110)||(17642068-17642133)
chr8 (1-44)||(504178-504221)
chr8 (1-44)||(1179997-1180040)
chr8 (1-44)||(12831047-12831090)
chr8 (1-44)||(15197333-15197376)
chr8 (1-44)||(34012353-34012396)
chr8 (45-104)||(37465684-37465743)
chr8 (61-104)||(39347493-39347536)
chr8 (1-44)||(40424000-40424043)
chr8 (45-104)||(42444565-42444624)
chr8 (5-43)||(9122196-9122234)
chr8 (1-39)||(10621144-10621182)
chr8 (66-104)||(29459633-29459671)
chr8 (45-107)||(34332109-34332171)
chr8 (45-107)||(10280555-10280619)
chr8 (45-106)||(34047764-34047825)
chr8 (59-104)||(40154489-40154534)
chr8 (45-109)||(6800119-6800183)
chr8 (1-45)||(14547921-14547965)
chr8 (45-105)||(37161503-37161563)
chr8 (2-46)||(44507145-44507189)
chr8 (45-104)||(2273010-2273069)
chr8 (45-104)||(2666505-2666564)
chr8 (1-44)||(23122654-23122697)
chr8 (1-44)||(30479531-30479574)
chr8 (1-44)||(43414638-43414681)
chr8 (46-104)||(27847458-27847516)
chr8 (60-109)||(5215683-5215732)
chr8 (59-104)||(17096642-17096687)
chr8 (7-52)||(25838189-25838234)
chr8 (45-106)||(32071591-32071652)
chr8 (59-108)||(34058191-34058240)
chr8 (45-102)||(36886509-36886566)
chr8 (8-45)||(42221514-42221551)
chr8 (5-45)||(16383376-16383416)
chr8 (7-47)||(17443822-17443862)
chr8 (54-105)||(26439879-26439931)
chr8 (8-44)||(30183939-30183975)
chr8 (3-51)||(32032718-32032766)
chr8 (5-45)||(34307215-34307255)
chr8 (60-108)||(35970685-35970733)
[»] chr2 (59 HSPs)
chr2 (45-109)||(3383534-3383598)
chr2 (45-111)||(5091990-5092056)
chr2 (45-106)||(11227625-11227686)
chr2 (45-104)||(4673949-4674008)
chr2 (45-102)||(6884161-6884218)
chr2 (45-110)||(38963411-38963476)
chr2 (45-101)||(11813544-11813600)
chr2 (45-102)||(5389548-5389605)
chr2 (1-50)||(9058474-9058523)
chr2 (45-102)||(33423363-33423420)
chr2 (45-106)||(34438533-34438594)
chr2 (45-102)||(34665573-34665630)
chr2 (45-106)||(42427918-42427979)
chr2 (1-45)||(20700814-20700858)
chr2 (1-45)||(30915462-30915506)
chr2 (1-45)||(33436157-33436201)
chr2 (47-103)||(42046076-42046132)
chr2 (45-104)||(14533169-14533228)
chr2 (1-44)||(40613959-40614002)
chr2 (1-47)||(7465792-7465838)
chr2 (47-104)||(1353507-1353564)
chr2 (1-46)||(5574545-5574590)
chr2 (1-46)||(28863453-28863498)
chr2 (1-46)||(33436209-33436254)
chr2 (1-41)||(19930877-19930917)
chr2 (45-101)||(37083211-37083267)
chr2 (45-104)||(58920-58979)
chr2 (45-108)||(15771657-15771720)
chr2 (1-44)||(17473020-17473063)
chr2 (1-44)||(27864704-27864747)
chr2 (1-44)||(40701478-40701521)
chr2 (1-47)||(2533121-2533167)
chr2 (6-44)||(28381717-28381755)
chr2 (1-43)||(41575138-41575180)
chr2 (8-45)||(17823783-17823820)
chr2 (1-46)||(32505705-32505750)
chr2 (1-45)||(10249439-10249483)
chr2 (1-45)||(38882871-38882914)
chr2 (45-104)||(39620191-39620251)
chr2 (1-44)||(4060685-4060728)
chr2 (54-104)||(11598114-11598165)
chr2 (1-44)||(13438343-13438386)
chr2 (2-45)||(38273200-38273243)
chr2 (45-104)||(40288051-40288110)
chr2 (59-105)||(7069193-7069239)
chr2 (63-105)||(7467119-7467161)
chr2 (45-107)||(12547361-12547423)
chr2 (59-104)||(18576672-18576718)
chr2 (59-104)||(4108307-4108352)
chr2 (45-102)||(8371913-8371970)
chr2 (45-109)||(15206083-15206148)
chr2 (45-102)||(15426370-15426427)
chr2 (8-45)||(42257192-42257229)
chr2 (8-45)||(45097799-45097836)
chr2 (45-101)||(5615378-5615434)
chr2 (61-101)||(12071158-12071198)
chr2 (5-45)||(26891565-26891605)
chr2 (45-105)||(32499149-32499209)
chr2 (2-46)||(36168834-36168878)
[»] chr4 (59 HSPs)
chr4 (45-110)||(41760008-41760073)
chr4 (45-105)||(3716324-3716384)
chr4 (45-105)||(48579256-48579316)
chr4 (45-107)||(28037682-28037744)
chr4 (45-95)||(52589080-52589130)
chr4 (1-45)||(50052485-50052529)
chr4 (45-104)||(27538915-27538974)
chr4 (45-104)||(34280576-34280635)
chr4 (45-104)||(51436161-51436220)
chr4 (45-107)||(30342822-30342884)
chr4 (1-50)||(29234302-29234351)
chr4 (45-105)||(30539568-30539628)
chr4 (1-44)||(6034044-6034087)
chr4 (1-44)||(11511519-11511562)
chr4 (45-104)||(14802712-14802771)
chr4 (45-100)||(36592382-36592437)
chr4 (45-104)||(47302029-47302088)
chr4 (1-44)||(50526228-50526271)
chr4 (45-104)||(52809291-52809350)
chr4 (45-111)||(13548751-13548817)
chr4 (1-45)||(480504-480548)
chr4 (1-45)||(29239885-29239929)
chr4 (45-109)||(43137712-43137776)
chr4 (59-107)||(46004685-46004733)
chr4 (1-45)||(48183106-48183150)
chr4 (1-45)||(55475190-55475234)
chr4 (45-104)||(36091059-36091118)
chr4 (1-44)||(40574779-40574822)
chr4 (1-44)||(41236347-41236390)
chr4 (54-101)||(47302399-47302446)
chr4 (45-104)||(48066352-48066411)
chr4 (45-104)||(53389194-53389253)
chr4 (45-104)||(55722476-55722535)
chr4 (3-45)||(42044426-42044468)
chr4 (45-91)||(46041714-46041760)
chr4 (54-104)||(46216128-46216178)
chr4 (69-106)||(52940478-52940515)
chr4 (45-105)||(18425465-18425525)
chr4 (45-104)||(1414446-1414505)
chr4 (1-44)||(3481654-3481697)
chr4 (1-44)||(8343220-8343263)
chr4 (45-104)||(29646624-29646683)
chr4 (1-44)||(31910192-31910235)
chr4 (45-104)||(37855121-37855180)
chr4 (45-108)||(38835848-38835911)
chr4 (45-104)||(52324314-52324373)
chr4 (1-44)||(54473590-54473633)
chr4 (69-111)||(19842431-19842473)
chr4 (45-107)||(39380746-39380808)
chr4 (46-108)||(40438983-40439045)
chr4 (8-45)||(29548023-29548060)
chr4 (69-102)||(45024862-45024895)
chr4 (44-107)||(423147-423211)
chr4 (72-104)||(5474384-5474416)
chr4 (47-91)||(9381046-9381090)
chr4 (5-45)||(19670777-19670817)
chr4 (1-45)||(24995164-24995208)
chr4 (8-52)||(47986200-47986244)
chr4 (45-108)||(53936859-53936923)
[»] chr7 (59 HSPs)
chr7 (45-104)||(41913441-41913500)
chr7 (1-46)||(3434560-3434605)
chr7 (47-108)||(41331725-41331786)
chr7 (45-101)||(1691338-1691394)
chr7 (45-105)||(3909927-3909987)
chr7 (1-45)||(8080440-8080484)
chr7 (45-105)||(21699636-21699696)
chr7 (45-101)||(28326684-28326740)
chr7 (45-109)||(31903432-31903496)
chr7 (45-109)||(45458693-45458757)
chr7 (1-44)||(19329842-19329885)
chr7 (45-104)||(23331700-23331759)
chr7 (45-104)||(30862789-30862848)
chr7 (45-111)||(9682373-9682439)
chr7 (3-45)||(38837216-38837258)
chr7 (1-46)||(36361970-36362015)
chr7 (1-45)||(7389388-7389432)
chr7 (1-45)||(11044187-11044231)
chr7 (1-45)||(19436244-19436288)
chr7 (54-106)||(43750073-43750125)
chr7 (1-44)||(21234401-21234444)
chr7 (1-44)||(35137533-35137576)
chr7 (45-108)||(40941871-40941934)
chr7 (2-44)||(31735884-31735926)
chr7 (2-44)||(46374860-46374902)
chr7 (45-111)||(47748149-47748215)
chr7 (48-105)||(27956376-27956433)
chr7 (8-45)||(35468919-35468956)
chr7 (1-46)||(36362024-36362069)
chr7 (45-105)||(18990090-18990150)
chr7 (2-46)||(26296642-26296686)
chr7 (45-109)||(30624070-30624134)
chr7 (1-45)||(40957706-40957750)
chr7 (48-104)||(41381497-41381553)
chr7 (2-46)||(46033859-46033903)
chr7 (1-44)||(4999571-4999614)
chr7 (6-45)||(18207179-18207218)
chr7 (1-44)||(38267040-38267083)
chr7 (5-44)||(40846174-40846213)
chr7 (45-104)||(42710931-42710990)
chr7 (45-108)||(44964168-44964231)
chr7 (45-104)||(45857821-45857880)
chr7 (7-45)||(10343626-10343664)
chr7 (54-104)||(27800384-27800434)
chr7 (6-44)||(39255985-39256023)
chr7 (59-104)||(1343019-1343064)
chr7 (8-41)||(3783998-3784031)
chr7 (59-104)||(12395194-12395239)
chr7 (5-46)||(22343359-22343400)
chr7 (59-104)||(25411987-25412032)
chr7 (45-105)||(30891277-30891338)
chr7 (6-39)||(35522881-35522914)
chr7 (5-46)||(41915739-41915780)
chr7 (45-110)||(43069074-43069139)
chr7 (8-45)||(45223041-45223078)
chr7 (56-104)||(22904850-22904898)
chr7 (5-45)||(38044196-38044236)
chr7 (45-105)||(38129732-38129792)
chr7 (44-104)||(42974895-42974955)
[»] chr1 (71 HSPs)
chr1 (45-106)||(37498742-37498803)
chr1 (45-104)||(922189-922248)
chr1 (45-104)||(31931045-31931104)
chr1 (45-107)||(8461873-8461935)
chr1 (45-105)||(39190904-39190964)
chr1 (45-104)||(27295058-27295117)
chr1 (45-104)||(35305151-35305210)
chr1 (45-104)||(45423609-45423668)
chr1 (45-104)||(50905581-50905640)
chr1 (45-111)||(18641881-18641947)
chr1 (1-47)||(51898740-51898786)
chr1 (1-45)||(2581914-2581958)
chr1 (45-101)||(51781451-51781507)
chr1 (1-44)||(9474933-9474976)
chr1 (45-104)||(16482576-16482635)
chr1 (1-44)||(27564792-27564835)
chr1 (2-45)||(32813246-32813289)
chr1 (45-104)||(41073270-41073329)
chr1 (45-108)||(48616794-48616857)
chr1 (47-106)||(51369327-51369386)
chr1 (45-107)||(5956874-5956936)
chr1 (45-95)||(51519791-51519841)
chr1 (54-107)||(633004-633057)
chr1 (1-45)||(23597148-23597192)
chr1 (54-102)||(26011298-26011346)
chr1 (60-104)||(33099017-33099061)
chr1 (1-49)||(50630453-50630501)
chr1 (1-44)||(3000319-3000362)
chr1 (45-104)||(28493810-28493869)
chr1 (45-104)||(34256453-34256512)
chr1 (1-44)||(37649198-37649241)
chr1 (6-45)||(38632383-38632422)
chr1 (45-104)||(46771079-46771138)
chr1 (1-44)||(47452377-47452420)
chr1 (1-44)||(48716339-48716382)
chr1 (61-95)||(6520348-6520382)
chr1 (1-50)||(44548433-44548482)
chr1 (45-102)||(51984936-51984993)
chr1 (45-101)||(23056768-23056824)
chr1 (1-45)||(38595153-38595197)
chr1 (45-105)||(39971616-39971676)
chr1 (45-105)||(44978868-44978928)
chr1 (47-95)||(45673336-45673384)
chr1 (69-104)||(8096968-8097003)
chr1 (45-104)||(9166873-9166932)
chr1 (45-104)||(38262481-38262540)
chr1 (5-44)||(41608554-41608593)
chr1 (45-107)||(46362367-46362430)
chr1 (45-104)||(52303013-52303072)
chr1 (45-107)||(2247064-2247126)
chr1 (45-103)||(44246345-44246403)
chr1 (45-110)||(7121951-7122016)
chr1 (45-102)||(11778983-11779040)
chr1 (54-111)||(33906312-33906369)
chr1 (60-104)||(34038526-34038571)
chr1 (1-46)||(41758803-41758848)
chr1 (63-103)||(42275701-42275742)
chr1 (45-102)||(51184044-51184101)
chr1 (45-105)||(51787815-51787876)
chr1 (1-45)||(8346445-8346489)
chr1 (3-43)||(11152437-11152476)
chr1 (57-104)||(24230929-24230977)
chr1 (45-104)||(25493498-25493558)
chr1 (45-101)||(26102820-26102876)
chr1 (45-104)||(35874285-35874345)
chr1 (69-101)||(43146422-43146454)
chr1 (46-105)||(44382364-44382424)
chr1 (1-45)||(49811584-49811628)
chr1 (59-103)||(50534245-50534289)
chr1 (5-49)||(50591061-50591105)
chr1 (69-105)||(51873645-51873681)
[»] chr5 (55 HSPs)
chr5 (45-101)||(13410545-13410601)
chr5 (45-104)||(6114121-6114180)
chr5 (1-47)||(2740271-2740317)
chr5 (45-108)||(21605644-21605707)
chr5 (54-103)||(2318782-2318831)
chr5 (45-102)||(6560828-6560885)
chr5 (45-105)||(2029352-2029412)
chr5 (45-105)||(43237700-43237760)
chr5 (45-104)||(1662041-1662100)
chr5 (45-104)||(6532579-6532638)
chr5 (54-101)||(27116465-27116512)
chr5 (1-44)||(28177775-28177818)
chr5 (45-104)||(34302646-34302705)
chr5 (45-104)||(42917117-42917176)
chr5 (2-44)||(26720516-26720558)
chr5 (2-44)||(26990265-26990307)
chr5 (1-43)||(36875660-36875702)
chr5 (2-44)||(40145407-40145449)
chr5 (45-109)||(2141237-2141301)
chr5 (1-41)||(18520941-18520981)
chr5 (48-104)||(29743895-29743951)
chr5 (1-45)||(36732999-36733043)
chr5 (45-104)||(4618059-4618118)
chr5 (1-44)||(14831814-14831857)
chr5 (1-44)||(33149695-33149738)
chr5 (1-44)||(35785199-35785242)
chr5 (59-106)||(36409904-36409951)
chr5 (1-47)||(6679695-6679741)
chr5 (45-95)||(18228806-18228856)
chr5 (45-107)||(36752557-36752619)
chr5 (5-46)||(2252229-2252270)
chr5 (45-105)||(12362705-12362765)
chr5 (8-39)||(10356639-10356670)
chr5 (45-104)||(15725844-15725903)
chr5 (49-104)||(16433002-16433057)
chr5 (59-102)||(34064960-34065003)
chr5 (45-104)||(35162351-35162410)
chr5 (2-49)||(41470474-41470521)
chr5 (1-44)||(42414359-42414402)
chr5 (45-95)||(3056394-3056444)
chr5 (2-52)||(6260059-6260109)
chr5 (5-39)||(21370019-21370053)
chr5 (48-102)||(33145210-33145264)
chr5 (45-106)||(9534868-9534929)
chr5 (45-106)||(13795617-13795678)
chr5 (8-45)||(13811651-13811688)
chr5 (8-45)||(15409674-15409711)
chr5 (7-44)||(33825387-33825424)
chr5 (45-104)||(480021-480081)
chr5 (5-45)||(3921326-3921366)
chr5 (59-107)||(6335387-6335435)
chr5 (45-105)||(21051651-21051711)
chr5 (45-101)||(23408255-23408311)
chr5 (54-105)||(28332119-28332171)
chr5 (8-44)||(35943956-35943992)
[»] chr3 (62 HSPs)
chr3 (45-104)||(42067579-42067638)
chr3 (45-105)||(38785429-38785489)
chr3 (45-104)||(876569-876628)
chr3 (45-104)||(11140247-11140306)
chr3 (45-104)||(29786944-29787003)
chr3 (45-104)||(42364274-42364333)
chr3 (45-107)||(44670605-44670667)
chr3 (1-45)||(11095410-11095454)
chr3 (54-106)||(19547487-19547539)
chr3 (45-101)||(29347607-29347663)
chr3 (1-45)||(49607413-49607457)
chr3 (5-44)||(14623900-14623939)
chr3 (45-104)||(27079726-27079785)
chr3 (45-104)||(27082693-27082752)
chr3 (45-104)||(31308877-31308936)
chr3 (45-104)||(35171540-35171599)
chr3 (45-104)||(39630238-39630297)
chr3 (45-104)||(40650067-40650126)
chr3 (1-44)||(53982011-53982054)
chr3 (45-95)||(379224-379274)
chr3 (8-50)||(21746247-21746289)
chr3 (1-47)||(24700011-24700057)
chr3 (2-44)||(26141590-26141632)
chr3 (1-46)||(8956760-8956805)
chr3 (1-46)||(35536624-35536669)
chr3 (45-105)||(25592353-25592413)
chr3 (54-106)||(43715104-43715156)
chr3 (1-45)||(54868952-54868996)
chr3 (1-44)||(33644200-33644243)
chr3 (45-105)||(42848553-42848615)
chr3 (45-104)||(44365621-44365680)
chr3 (45-104)||(45636089-45636148)
chr3 (45-104)||(47470428-47470487)
chr3 (55-101)||(7671806-7671852)
chr3 (54-104)||(27647478-27647528)
chr3 (1-39)||(52629305-52629343)
chr3 (54-108)||(53516937-53516991)
chr3 (46-105)||(8965914-8965974)
chr3 (1-45)||(11347979-11348023)
chr3 (54-106)||(14998506-14998558)
chr3 (6-46)||(17470403-17470443)
chr3 (1-45)||(27714948-27714992)
chr3 (1-45)||(33118908-33118952)
chr3 (1-45)||(36707481-36707525)
chr3 (1-44)||(8076393-8076436)
chr3 (59-106)||(24397372-24397419)
chr3 (45-104)||(47948742-47948801)
chr3 (1-40)||(48587148-48587187)
chr3 (5-43)||(13898116-13898154)
chr3 (54-104)||(21289169-21289219)
chr3 (69-111)||(28146686-28146728)
chr3 (1-43)||(31456690-31456732)
chr3 (45-106)||(40021077-40021139)
chr3 (6-44)||(47531865-47531903)
chr3 (61-102)||(39540673-39540714)
chr3 (8-45)||(41189828-41189865)
chr3 (3-44)||(45058611-45058652)
chr3 (45-104)||(16136969-16137029)
chr3 (45-104)||(26409966-26410026)
chr3 (3-39)||(26754700-26754736)
chr3 (45-104)||(26885318-26885378)
chr3 (45-104)||(42622196-42622256)
[»] chr6 (34 HSPs)
chr6 (45-104)||(24212912-24212971)
chr6 (45-102)||(2258905-2258962)
chr6 (45-102)||(4901296-4901353)
chr6 (45-102)||(17545607-17545664)
chr6 (1-45)||(31110816-31110860)
chr6 (45-104)||(8401763-8401822)
chr6 (45-104)||(13390385-13390444)
chr6 (45-104)||(26315447-26315506)
chr6 (45-104)||(26358900-26358959)
chr6 (45-106)||(6848508-6848569)
chr6 (45-94)||(24487634-24487683)
chr6 (10-46)||(22422084-22422120)
chr6 (1-41)||(22880715-22880755)
chr6 (2-46)||(31976246-31976290)
chr6 (61-104)||(10888173-10888216)
chr6 (45-104)||(15383551-15383610)
chr6 (5-44)||(31953091-31953130)
chr6 (45-104)||(32834121-32834180)
chr6 (1-44)||(32869678-32869721)
chr6 (7-45)||(6209528-6209566)
chr6 (59-109)||(7344677-7344727)
chr6 (61-102)||(926542-926583)
chr6 (8-44)||(17598554-17598590)
chr6 (45-108)||(11446732-11446795)
chr6 (1-44)||(31109457-31109500)
chr6 (1-43)||(946377-946419)
chr6 (59-104)||(14501026-14501071)
chr6 (5-50)||(15990103-15990148)
chr6 (59-103)||(8376385-8376429)
chr6 (60-104)||(11273779-11273823)
chr6 (1-46)||(11427614-11427661)
chr6 (8-40)||(28536550-28536582)
chr6 (9-45)||(28536678-28536714)
chr6 (5-45)||(30341421-30341461)
[»] scaffold0005 (1 HSPs)
scaffold0005 (45-104)||(36956-37015)
[»] scaffold1268 (1 HSPs)
scaffold1268 (2-44)||(987-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (2-44)||(987-1029)
[»] scaffold0113 (1 HSPs)
scaffold0113 (54-106)||(29243-29295)
[»] scaffold0625 (1 HSPs)
scaffold0625 (45-105)||(6610-6670)
[»] scaffold0604 (1 HSPs)
scaffold0604 (54-102)||(2022-2070)
[»] scaffold0077 (1 HSPs)
scaffold0077 (45-81)||(48033-48069)
[»] scaffold0184 (1 HSPs)
scaffold0184 (45-109)||(16929-16994)
[»] scaffold0078 (1 HSPs)
scaffold0078 (45-109)||(55850-55915)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-45)||(10166-10210)


Alignment Details
Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 150 - 266
Target Start/End: Complemental strand, 6850420 - 6850304
Alignment:
Q  150 tctcataaacccaaatatggtttttgttccggtctgccacgcgccaccgccatatccttattcacctccttgtcatagatctggcgcaacatcttcttgt 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6850420 tctcataaacccaaatatggtttttgttccggtctgccacgcgccaccgccatatccttattcacctccttgtcatacatctggcgcaacatcttcttgt 6850321  T
Q  250 tcctgacaagcaatgaa 266  Q
    |||||||||||||||||    
T  6850320 tcctgacaagcaatgaa 6850304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 15726237 - 15726296
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  15726237 taatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 15726296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 29773504 - 29773445
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29773504 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29773445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 4854921 - 4854964
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4854921 aaagggtgtattgccacctaaggatgtctatgtatcattactct 4854964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 14498650 - 14498709
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||||    
T  14498650 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 14498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 36002415 - 36002356
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||    
T  36002415 taatttaaggatttggtgtactaatacactcaaattgttggatgtaccatagaacttgcc 36002356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37038522 - 37038477
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  37038522 caaagggtgtattgccacctaaagatgtctatgtatcattactcta 37038477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 28090251 - 28090191
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||||||| |||||||||||| ||||||||| |||| ||||||||| |||||||||    
T  28090251 taatttaaggatttggtgtaccaatatactcaaattattgggtgtaccatagaatttgcca 28090191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 37511147 - 37511083
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||| ||||    
T  37511147 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatcgaatttgccttatt 37511083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 43049596 - 43049536
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||| |||| |||||||||||||| ||||||| |||||||||||||| |||||||||    
T  43049596 taatttaatgatttggtgtaccaatacattcaaatttttggatgtaccatagaatttgcca 43049536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 946035 - 945976
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||||| || ||||||||    
T  946035 taatttaaagatttggtgtaccaatacactcaaatggttggatgtaccgtagaatttgcc 945976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15048238 - 15048281
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  15048238 caaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 19718698 - 19718757
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| ||||||| |||||||||||||| |||||||||||||| ||||||||    
T  19718698 taatttaatgatttggtgtactaatacactcaaatttttggatgtaccatagaatttgcc 19718757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20074991 - 20075034
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  20074991 caaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 23286624 - 23286565
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||| ||||||||| | ||||||||| ||||||||    
T  23286624 taatttaaggatttggtgtaccaatacacgcaaattgttaggtgtaccatagaatttgcc 23286565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 29229524 - 29229583
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  29229524 taatttaagaatttggtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 29229583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 38502243 - 38502184
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || |||||    
T  38502243 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 38502184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 44934958 - 44934895
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    ||||||||||||| | |||||||||||| |||||||||||| ||||||||| |||||| |||||    
T  44934958 taatttaaggatttgatgtaccaatacattcaaattgttgggtgtaccatagaatttgtcatat 44934895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5957873 - 5957831
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattact 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  5957873 caaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 17642133 - 17642068
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 110  Q
    |||||||| |||| |||||||||||||||||| ||  |||||||||||||| |||||||| |||||    
T  17642133 taatttaatgatttggtgtaccaatacactcatatctttggatgtaccatagaatttgccttattt 17642068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 504178 - 504221
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  504178 caaaaggtgtattgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1179997 - 1180040
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  1179997 caaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12831090 - 12831047
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||| ||||||||| |||||||||||||||||||    
T  12831090 caaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15197376 - 15197333
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  15197376 caaagggtgtattgccacctaagagtgtctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34012353 - 34012396
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  34012353 caaagggtgtattaccacctaagggtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 37465743 - 37465684
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||  |||| |||||||||||||||| ||||| |||||||||||||| ||||||||    
T  37465743 taatttattgatttggtgtaccaatacacttaaatttttggatgtaccatagaatttgcc 37465684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 39347493 - 39347536
Alignment:
Q  61 tgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  39347493 tgtaccaatacactcaaattttttgatgtaccataaaatttgcc 39347536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40424000 - 40424043
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  40424000 caaagggtgtattgccacctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 42444565 - 42444624
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| |||||||||||||||||||||  || ||||||||||| ||||||||    
T  42444565 taatttaatgatttggtgtaccaatacactcaaatctttagatgtaccatagaatttgcc 42444624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 9122234 - 9122196
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattact 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  9122234 gggtgtattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10621144 - 10621182
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcat 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  10621144 caaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 29459671 - 29459633
Alignment:
Q  66 caatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  29459671 caatacactcaaattgttgggtgtaccataaaatttgcc 29459633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 34332171 - 34332109
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    ||||||||| ||| ||||||||||| |||| ||||| |||| ||||||||| |||||||||||    
T  34332171 taatttaagaatttggtgtaccaatgcacttaaattattgggtgtaccatagaatttgccata 34332109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 10280619 - 10280555
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttgg--atgtaccataaaatttgccata 107  Q
    |||||||| |||| |||||||||||||||||||||||||||   |||||| ||||| ||||||||    
T  10280619 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtgtaccttaaaacttgccata 10280555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 34047764 - 34047825
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||  ||| ||||||||  ||||||||||||||||| ||||||||| ||||||||||    
T  34047764 taatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgccat 34047825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 40154534 - 40154489
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||    
T  40154534 ggtgtaccgatacactcaaaatgttgggtgtaccataaaatttgcc 40154489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 6800119 - 6800183
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    ||||| || |||| |||||||||||||||||||||  |||  |||||||||||||||||| ||||    
T  6800119 taattcaatgatttggtgtaccaatacactcaaatctttgagtgtaccataaaatttgccttatt 6800183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14547965 - 14547921
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||    
T  14547965 caaatggtgtattgccacctaagggtgtctatgtatctttactct 14547921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 37161563 - 37161503
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||||||| | |||||| |||||||||||||||||| |||| |||| || ||||||    
T  37161563 taatttaaggatttgatgtacctatacactcaaattgttgggtgtagcatagaacttgcca 37161503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 44507145 - 44507189
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||    
T  44507145 aaagagtgtattaccacctaagggtgtctatgtatcattactcta 44507189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 2273069 - 2273010
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| |||||||||||||||||| ||  |||| ||||||||| ||||||||    
T  2273069 taatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 2273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 2666564 - 2666505
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| | || ||||||||| |||||||||| |||| ||||||||||| ||||||||    
T  2666564 taatttaatgctttggtgtaccagtacactcaaaatgttagatgtaccatagaatttgcc 2666505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23122654 - 23122697
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||    
T  23122654 caaaaggtgtattgccacttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30479531 - 30479574
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||    
T  30479531 caaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43414638 - 43414681
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||    
T  43414638 caaagggtgtgttgccatctaaggatgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 27847516 - 27847458
Alignment:
Q  46 aatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||| | || ||||||||| |||||||||| | |||||||||||||| ||||||||    
T  27847516 aatttaatgttttggtgtaccagtacactcaaaatattggatgtaccatagaatttgcc 27847458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 5215683 - 5215732
Alignment:
Q  60 gtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    ||||||| ||||||||||| | |||  |||||||||||||||||||||||    
T  5215683 gtgtaccgatacactcaaaatattgagtgtaccataaaatttgccatatt 5215732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 17096642 - 17096687
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| ||||||||||| |||||| ||||||||| ||||||||    
T  17096642 ggtgtaccgatacactcaaaatgttgggtgtaccatagaatttgcc 17096687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 25838234 - 25838189
Alignment:
Q  7 gtgtattgccacctaaggatgtctatgtatcattactctaatttaa 52  Q
    |||||||||||||||||||| ||||| |||||| |||||| |||||    
T  25838234 gtgtattgccacctaaggatatctatttatcataactctattttaa 25838189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 32071591 - 32071652
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    |||||||| ||||  ||||||| || |||||||||| || | ||||||||||||||||||||    
T  32071591 taatttaacgatttcgtgtaccgattcactcaaatttttcggtgtaccataaaatttgccat 32071652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 34058191 - 34058240
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    ||||||| | |||||||| | |||||||||||||||| ||||||||||||    
T  34058191 ggtgtacaagtacactcagaatgttggatgtaccatagaatttgccatat 34058240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 36886509 - 36886566
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||  ||| |||||||| ||| ||||||||| || ||||||||||||||||||    
T  36886509 taatttaataatttggtgtaccgatatactcaaatttttagatgtaccataaaatttg 36886566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 42221551 - 42221514
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  42221551 tgtattgtcacctaaggatgtatatgtatcattactct 42221514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 16383416 - 16383376
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  16383416 gggtgtattgccacctaagggtgtttatgtatcataactct 16383376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 17443862 - 17443822
Alignment:
Q  7 gtgtattgccacctaaggatgtctatgtatcattactctaa 47  Q
    |||||||| ||||||||| |||||||||||||| |||||||    
T  17443862 gtgtattgtcacctaaggttgtctatgtatcataactctaa 17443822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 26439879 - 26439931
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttgga-tgtaccataaaatttgcca 105  Q
    |||||||||||||||| |||||||||| || || ||||||||| |||||||||    
T  26439879 gattgggtgtaccaatgcactcaaattttttgagtgtaccatagaatttgcca 26439931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 30183939 - 30183975
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  30183939 tgtattgccacgtaaggatgtatatgtatcattactc 30183975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 32032766 - 32032718
Alignment:
Q  3 aagggtgtattgccacctaaggatgtctatgtatcattactctaattta 51  Q
    |||| ||||||||||||||||| ||| |||||||||| |||||| ||||    
T  32032766 aaggatgtattgccacctaagggtgtttatgtatcataactctatttta 32032718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 34307255 - 34307215
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  34307255 gggtgtattgccacctaagggtgtttatgtatcataactct 34307215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 35970733 - 35970685
Alignment:
Q  60 gtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    ||||| ||||||||||||||| |||||||||| ||| |||||| |||||    
T  35970733 gtgtatcaatacactcaaatttttggatgtactatataatttgtcatat 35970685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 3383534 - 3383598
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3383534 taatttaaggatttggtgtaccaatacactcaaatggttggatgtaccataaaatttgccatatt 3383598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 5092056 - 5091990
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 111  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  5092056 taatttaaggatttggtgtaccaatacactcaaattgttagatgtaccatagaatttgccatatttt 5091990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 11227686 - 11227625
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  11227686 taatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgccat 11227625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 4673949 - 4674008
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  4673949 taatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 4674008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 6884218 - 6884161
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  6884218 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 6884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 38963411 - 38963476
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 110  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  38963411 taatttaaggatttgatgtaccaatacattcaaattgttggatgtaccatacaatttgccttattt 38963476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 11813544 - 11813600
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  11813544 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 11813600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 5389548 - 5389605
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  5389548 taatttaagtatttggtgtaccaatacactcaaattggtggatgtaccatagaatttg 5389605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9058523 - 9058474
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaattt 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  9058523 caaagggtgtattgccacctaagggtgtctatgtatcattactcttattt 9058474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 33423363 - 33423420
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||||| ||||||    
T  33423363 taatttaaggatttggtgtaccaatacattcaaattgttagatgtaccatagaatttg 33423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 34438533 - 34438594
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    |||||||  |||| ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  34438533 taatttattgatttggtgttccaatacactcaaattattggatgtaccataaaatttgccat 34438594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 34665630 - 34665573
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||||| ||||||    
T  34665630 taatttaaggatttggtgtaccaatacactcaaattgttgggtataccatagaatttg 34665573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 42427918 - 42427979
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || |||||||    
T  42427918 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgccat 42427979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20700858 - 20700814
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  20700858 caaagggtgtattgccacataaggatgtctatgtatcattactct 20700814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30915506 - 30915462
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  30915506 caaagggtgtattgccacctaagggtgtctatgtatcattactct 30915462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33436157 - 33436201
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  33436157 caaagggtgtattgccacctaagggtgtctatgtatcattactct 33436201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 42046132 - 42046076
Alignment:
Q  47 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 103  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||    
T  42046132 atttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaatttgc 42046076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 14533169 - 14533228
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||| | |||||||||| ||||||||| ||||||||    
T  14533169 taatttaaggatttggtgtaccaatacatttaaattgttgggtgtaccatagaatttgcc 14533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40613959 - 40614002
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  40613959 caaagggtgtattgccacctaaggatgtctatgtatcataactc 40614002  T

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Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7465792 - 7465838
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaa 47  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  7465792 caaagggtgtattgccatctaagggtgtctatgtatcattactctaa 7465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 1353564 - 1353507
Alignment:
Q  47 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||| |||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  1353564 atttaaggatttggtgtaccaatacactcatattattgggtgtaccatagaatttgcc 1353507  T

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Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5574545 - 5574590
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  5574545 caaagggtgtattgccacctaagagtgtctatgtatcattactcta 5574590  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28863498 - 28863453
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  28863498 caaagggtgtattgccacctaagggtgtctatgtatcattattcta 28863453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33436254 - 33436209
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||    
T  33436254 caaaaggtgtattgccatctaaggatgtctatgtatcattactcta 33436209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19930877 - 19930917
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcatta 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  19930877 caaagggtgtattgccacctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 37083267 - 37083211
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||  ||| |||||||||||||||| |||||||||||||||||||| |||||    
T  37083267 taatttaaaaattcggtgtaccaatacacttaaattgttggatgtaccatataattt 37083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 58979 - 58920
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| | |||||||||||||||||||| |||| ||||||||| | ||||||    
T  58979 taatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagattttgcc 58920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 15771657 - 15771720
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    |||||||| ||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||||||    
T  15771657 taatttaatgattgggtgtaccaatacacttaaataattgggtgtactatagaatttgccatat 15771720  T

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Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17473063 - 17473020
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  17473063 caaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

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Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27864747 - 27864704
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  27864747 caaagggtgtattgccacataagggtgtctatgtatcattactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40701521 - 40701478
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  40701521 caaaaggtgtattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2533167 - 2533121
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaa 47  Q
    |||||| ||||||||||| |||||||||||||||||||| |||||||    
T  2533167 caaaggatgtattgccacttaaggatgtctatgtatcataactctaa 2533121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 28381717 - 28381755
Alignment:
Q  6 ggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  28381717 ggtgtattgccacctaagggtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41575180 - 41575138
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattact 43  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  41575180 caaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 17823820 - 17823783
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  17823820 tgtattgccacctaaggatgtatatgtatcattactct 17823783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32505705 - 32505750
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||    
T  32505705 caaaaggtgtattgtcacctaagggtgtctatgtatcattactcta 32505750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10249439 - 10249483
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  10249439 caaaaggtgtattgtcacctaagggtgtctatgtatcattactct 10249483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38882871 - 38882914
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  38882871 caaagggt-tattgccacctaagggtgtctatgtatcattactct 38882914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 39620251 - 39620191
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 104  Q
    |||||||| || |||||||||| |||||||||||| | |||| ||||||||||||||||||    
T  39620251 taatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 39620191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4060728 - 4060685
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||    
T  4060728 caaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 11598165 - 11598114
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttgga-tgtaccataaaatttgcc 104  Q
    ||||||||||||||||||||||||||| || || ||||||||| ||||||||    
T  11598165 gattgggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 11598114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13438386 - 13438343
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||    
T  13438386 caaaggatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 38273200 - 38273243
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||    
T  38273200 aaagggtgtattgccatctaagaatgtctatgtatcataactct 38273243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 40288051 - 40288110
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| ||||||||  |||||||||| | ||| |||||||||||||||||||    
T  40288051 taatttaacgatttggtgtaccggtacactcaaaattttgaatgtaccataaaatttgcc 40288110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 7069239 - 7069193
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||  |||||||||| |||||| |||||||||||||||||||    
T  7069239 ggtgtacccgtacactcaaaatgttgggtgtaccataaaatttgcca 7069193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 7467161 - 7467119
Alignment:
Q  63 taccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||||||||||||| |||| ||||||||| |||||||||    
T  7467161 taccaatacactcaaatttttgggtgtaccatagaatttgcca 7467119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 12547423 - 12547361
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    |||||||| |||| |||||| ||||||||||| ||  |||| ||||||||| |||||||||||    
T  12547423 taatttaatgatttggtgtatcaatacactcatatctttgggtgtaccatagaatttgccata 12547361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 18576672 - 18576718
Alignment:
Q  59 ggtgtaccaatacactcaaattg-ttggatgtaccataaaatttgcc 104  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  18576672 ggtgtaccaatacacccaaatttattggatgtaccataaaatttgcc 18576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 4108352 - 4108307
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  |||||||||| |||||||||||||||| ||||||||    
T  4108352 ggtgtaccggtacactcaaaatgttggatgtaccatagaatttgcc 4108307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 8371913 - 8371970
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||  ||| |||||| ||||||||| ||||| |||||||||||||| ||||||    
T  8371913 taatttaaaaatttggtgtatcaatacacttaaattattggatgtaccatagaatttg 8371970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 15206083 - 15206148
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaa-ttgttggatgtaccataaaatttgccatatt 109  Q
    |||||||| |||| ||||||||| |||||||||| || || |||||| |||| |||||||||||||    
T  15206083 taatttaacgatttggtgtaccagtacactcaaattttttagatgtatcatagaatttgccatatt 15206148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 15426370 - 15426427
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||  ||| ||||||||  |||||||||||||||||||||||  |||||||||    
T  15426370 taatttaataatttggtgtaccggtacactcaaattgttggatgtactgtaaaatttg 15426427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 42257229 - 42257192
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  42257229 tgtattgccacctaaagatgtctatgtatcataactct 42257192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 45097799 - 45097836
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  45097799 tgtattgccacctaaggatgtttatgtatcataactct 45097836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 5615434 - 5615378
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    |||||||| |||| | ||||||  |||||||||||| |||||||||||||| |||||    
T  5615434 taatttaacgatttgatgtaccggtacactcaaatttttggatgtaccatagaattt 5615378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 12071198 - 12071158
Alignment:
Q  61 tgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||||||||||||||||||| | ||||||| |||||    
T  12071198 tgtaccaatacactcaaattgttgggtataccatagaattt 12071158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 26891565 - 26891605
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||| || ||||||||||| |||||    
T  26891565 gggtgtattgccacctaagggtggctatgtatcataactct 26891605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 32499209 - 32499149
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||  |||| |||||| ||||||||||||||| || | ||||||||| |||||||||    
T  32499209 taatttattgatttggtgtatcaatacactcaaattctttggtgtaccatagaatttgcca 32499149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 36168878 - 36168834
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    ||||| ||||||| || ||||||||||||||||||||| ||||||    
T  36168878 aaaggatgtattgtcatctaaggatgtctatgtatcataactcta 36168834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 41760008 - 41760073
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41760008 taatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgccaaattt 41760073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 3716384 - 3716324
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||    
T  3716384 taatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcca 3716324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 48579256 - 48579316
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||    
T  48579256 taatttaaggatttggtgtaccaatacattcaaattgttggatgtaccatataatttgcca 48579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 28037744 - 28037682
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    ||||||||||||| ||||||||||||||||||||||||||| || |||||| |||||||||||    
T  28037744 taatttaaggatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgccata 28037682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 52589130 - 52589080
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 95  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52589130 taatttaaggatttggtgtaccaatacactcaaattgttggatgtaccata 52589080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50052485 - 50052529
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  50052485 caaagggtgtattgccacctaaggatgtctatgtatcattactct 50052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 27538974 - 27538915
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||||    
T  27538974 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 27538915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 34280576 - 34280635
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||||    
T  34280576 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 34280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 51436161 - 51436220
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  51436161 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 51436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 30342884 - 30342822
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    |||||||| |||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  30342884 taatttaaagatttggtgtaccaatacactcaaatggttgggtgtaccatataatttgccata 30342822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29234302 - 29234351
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaattt 50  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  29234302 caaagggtgtattgccatctaagggtgtctatgtatcattactctaattt 29234351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 30539628 - 30539568
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || ||||||    
T  30539628 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcca 30539568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6034087 - 6034044
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  6034087 caaagggtgtattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11511519 - 11511562
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  11511519 caaagggtgtattgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 14802771 - 14802712
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||| |||||||||||||||||||  ||||||||| ||||||||    
T  14802771 taatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 14802712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 36592382 - 36592437
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatt 100  Q
    ||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||    
T  36592382 taatttaaggatttggtgtaacaatacactcaaatttttgggtgtaccataaaatt 36592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 47302088 - 47302029
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| | ||||||||||||||||||||||| | || |||||||||||||||    
T  47302088 taatttaaggatttgatgtaccaatacactcaaattgttaggtgcaccataaaatttgcc 47302029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50526228 - 50526271
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  50526228 caaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 52809291 - 52809350
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||||  |||||||    
T  52809291 taatttaaaaattcggtgtaccaatacactcaaattgttggatgtaccatagtatttgcc 52809350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 13548751 - 13548817
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 111  Q
    |||||||| |||| ||||||||  |||||||||||| ||||||| ||||||||||||||||| ||||    
T  13548751 taatttaatgatttggtgtaccggtacactcaaatttttggatgcaccataaaatttgccatttttt 13548817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 480504 - 480548
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  480504 caaagggtgtattgtcacctaagggtgtctatgtatcattactct 480548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29239929 - 29239885
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  29239929 caaatggtgtattgccacctaagggtgtctatgtatcattactct 29239885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 43137712 - 43137776
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||||||| || ||||| ||||    
T  43137712 taatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgccttatt 43137776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 46004685 - 46004733
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  46004685 ggtgtaccaatacactcaaatttttggatgtaccatagaattcgccata 46004733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48183106 - 48183150
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||    
T  48183106 caaagggtgtattgccacgtaagggtgtctatgtatcattactct 48183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 55475234 - 55475190
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||||||||| |||||||||| |||||    
T  55475234 caaagggtgtattgccacctaaggatgtttatgtatcataactct 55475190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 36091118 - 36091059
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| |||||||||||||||||| ||  |||||||||||||| ||||||||    
T  36091118 taatttaatgatttggtgtaccaatacactcatatctttggatgtaccatataatttgcc 36091059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40574822 - 40574779
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  40574822 caaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41236390 - 41236347
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  41236390 caaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 47302446 - 47302399
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||    
T  47302446 gattgggtgtaccaatacactcaaatttttgagtgtaccataaaattt 47302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 48066352 - 48066411
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  48066352 taatttaatgatttggtataccaatacactcaaatgattggatgtaccatagaatttgcc 48066411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 53389194 - 53389253
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| ||||  ||||||| |||||||||||||||| ||||||||||| ||||||||    
T  53389194 taatttaaagatttagtgtaccgatacactcaaattgtttgatgtaccatagaatttgcc 53389253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 55722535 - 55722476
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||||||  ||||||||||||| |||||||||| |||||| |||| ||||||||    
T  55722535 taatttaaggatttagtgtaccaatacattcaaattgttagatgtatcatagaatttgcc 55722476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 42044426 - 42044468
Alignment:
Q  3 aagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  42044426 aaggatgtattgccacctaagggtgtctatgtatcattactct 42044468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 46041760 - 46041714
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtac 91  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||    
T  46041760 taatttaaagatttggtgtatcaatacactcaaattgttggatgtac 46041714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 46216128 - 46216178
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||||||||||||||||| |||| ||||| ||| ||||||||    
T  46216128 gattgggtgtaccaatacactcaaatttttgggtgtacaatagaatttgcc 46216178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 52940515 - 52940478
Alignment:
Q  69 tacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  52940515 tacactcaaattgttggatgtaccatagaatttgccat 52940478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 18425465 - 18425525
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||| |||| |||||||||||||||||| ||  |||| ||||||||| |||||||||    
T  18425465 taatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcca 18425525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 1414446 - 1414505
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| |||||||||||||||||||||  || | ||| ||||||||||||||    
T  1414446 taatttaatgatttggtgtaccaatacactcaaatctttaggtgtgccataaaatttgcc 1414505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3481697 - 3481654
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||| |||||||||||||||| | |||||||||||||||||||    
T  3481697 caaagagtgtattgccacctaaaggtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8343220 - 8343263
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||    
T  8343220 caaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 29646683 - 29646624
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||  |||| |||||||||||||||||||| | || ||||||||||| ||||||||    
T  29646683 taatttattgatttggtgtaccaatacactcaaaatttttgatgtaccatagaatttgcc 29646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31910235 - 31910192
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||    
T  31910235 caaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 37855180 - 37855121
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||| |||||||||||||||| | | || |||| ||||||||    
T  37855180 taatttaaggatttggtgtacctatacactcaaattgttaggtatatcatagaatttgcc 37855121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 38835911 - 38835848
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    ||||||||| ||| | |||||||||||||||||||| || | ||||||||| |||||| |||||    
T  38835911 taatttaagaatttgatgtaccaatacactcaaattattaggtgtaccatagaatttgtcatat 38835848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 52324314 - 52324373
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| | || ||||||||  |||||||||| |||||| ||||||||||||||||||    
T  52324314 taatttaatgctttggtgtaccggtacactcaaaatgttgggtgtaccataaaatttgcc 52324373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54473590 - 54473633
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||    
T  54473590 caaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 19842473 - 19842431
Alignment:
Q  69 tacactcaaattgttggatgtaccataaaatttgccatatttt 111  Q
    |||||||||||| |||||||||||||| |||||||| ||||||    
T  19842473 tacactcaaatttttggatgtaccatagaatttgccttatttt 19842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 39380746 - 39380808
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    |||||||| |||| ||||||||  |||||| ||||| ||| |||||||||| |||||||||||    
T  39380746 taatttaatgatttggtgtaccggtacacttaaatttttgaatgtaccatagaatttgccata 39380808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 40438983 - 40439045
Alignment:
Q  46 aatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    ||||||| |||| ||||||||  |||||||||||| |||  ||||||||| ||||||||||||    
T  40438983 aatttaatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaatttgccatat 40439045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 29548023 - 29548060
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  29548023 tgtattgccacctaaggatgtttatgtatcataactct 29548060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 102
Target Start/End: Complemental strand, 45024895 - 45024862
Alignment:
Q  69 tacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||||||||| ||||||||||||||||||    
T  45024895 tacactcaaattgttagatgtaccataaaatttg 45024862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 423211 - 423147
Alignment:
Q  44 ctaatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccata 107  Q
    ||||||||| || |||||||||| |||||||||||| | |||||||||| ||| ||||| |||||    
T  423211 ctaatttaaagaatgggtgtaccgatacactcaaatatattggatgtacgatagaatttaccata 423147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 5474384 - 5474416
Alignment:
Q  72 actcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||| |||||||||||||||||||||||||    
T  5474384 actcaaaatgttggatgtaccataaaatttgcc 5474416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 9381090 - 9381046
Alignment:
Q  47 atttaaggattgggtgtaccaatacactcaaattgttggatgtac 91  Q
    ||||||| ||| |||||||||||||| ||||||| ||||||||||    
T  9381090 atttaagaatttggtgtaccaatacaatcaaattcttggatgtac 9381046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 19670777 - 19670817
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  19670777 gggtgtattgccacctaagggtgtttatgtatcataactct 19670817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24995164 - 24995208
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||| |||||| |||| || ||||||||||||    
T  24995164 caaagggtgtattgccatctaagggtgtccatatatcattactct 24995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 47986244 - 47986200
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactctaatttaa 52  Q
    ||||||||||||||||| ||| |||||||||| |||||| |||||    
T  47986244 tgtattgccacctaagggtgtttatgtatcataactctactttaa 47986200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 53936859 - 53936923
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccatat 108  Q
    |||||||| || ||||||||||  ||||||||||| | |||| ||||||||| ||||||||||||    
T  53936859 taatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgccatat 53936923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 8e-21; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 41913441 - 41913500
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  41913441 taatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatataatttgcc 41913500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3434605 - 3434560
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3434605 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 3434560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 41331786 - 41331725
Alignment:
Q  47 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    ||||||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  41331786 atttaaggatttggtgtaccaatacactcaaattgttaggtgtaccataaaacttgccatat 41331725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 1691338 - 1691394
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||| |||||    
T  1691338 taatttaaggatttgatgtaccaatacactcaaatggttggatgtaccatagaattt 1691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 3909987 - 3909927
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||  ||| ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  3909987 taatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcca 3909927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8080440 - 8080484
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  8080440 caaagggtgtattgccacctaagggtgtctatgtatcattactct 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 21699636 - 21699696
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| |||| ||||    
T  21699636 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaattcgcca 21699696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 28326740 - 28326684
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||| ||| |||||    
T  28326740 taatttaaggatttggtgtaccaatacactcaaattattggatgtacgatagaattt 28326684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 31903432 - 31903496
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    ||||||||||||| | |||||||||||| ||||||||||||||||| |||| ||||||| |||||    
T  31903432 taatttaaggatttgatgtaccaatacattcaaattgttggatgtatcatataatttgctatatt 31903496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 45458757 - 45458693
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||| |||| |||||||| ||||    
T  45458757 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaacatagaatttgccctatt 45458693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19329885 - 19329842
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  19329885 caaaaggtgtattgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 23331759 - 23331700
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||||||||||||   ||||||||| ||||||||    
T  23331759 taatttaaggatttggtgtaccaatacactcaaattgttaagtgtaccatagaatttgcc 23331700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 30862848 - 30862789
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || |||||    
T  30862848 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 30862789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 9682373 - 9682439
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 111  Q
    |||||||| |||| ||||||||  |||||||||||| ||||||| ||||||||||||||||| ||||    
T  9682373 taatttaatgatttggtgtaccggtacactcaaatttttggatgcaccataaaatttgccatttttt 9682439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 38837258 - 38837216
Alignment:
Q  3 aagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  38837258 aagggtgtattgccacctaagggtgtctatgtatcattactct 38837216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36361970 - 36362015
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||    
T  36361970 caaaggatgtattgccacctaagggtgtctatgtatcattactcta 36362015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7389432 - 7389388
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  7389432 caaagagtgtattgccacctaagggtgtctatgtatcattactct 7389388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11044231 - 11044187
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  11044231 caaaggatgtattgccacctaagggtgtctatgtatcattactct 11044187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19436244 - 19436288
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  19436244 caaaaggtgtattgtcacctaaggatgtctatgtatcattactct 19436288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 43750125 - 43750073
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||||||||||||||||||||| |||  ||||||||| ||||||||||    
T  43750125 gattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgccat 43750073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21234444 - 21234401
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  21234444 caaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35137576 - 35137533
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  35137576 caaagggtgtattgccacctaagggtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 40941934 - 40941871
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    |||||||| ||||  |||||||||||||||||||||||||  ||||||||| |||||| |||||    
T  40941934 taatttaaagattttgtgtaccaatacactcaaattgttgagtgtaccatagaatttgtcatat 40941871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 31735926 - 31735884
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| ||||||||||||||||||||||||||||||||| ||||    
T  31735926 aaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 46374860 - 46374902
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||| |||||||||||||||||||||||||||| ||||    
T  46374860 aaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 47748149 - 47748215
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 111  Q
    ||||||||||| | ||| |||||||||| ||||||| || | ||||||||||||||| |||||||||    
T  47748149 taatttaaggacttggtataccaatacattcaaatttttaggtgtaccataaaatttcccatatttt 47748215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 27956433 - 27956376
Alignment:
Q  48 tttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||| |||| |||||||||||| |||||||||||| | ||||||||| |||||||||    
T  27956433 tttaaagatttggtgtaccaatatactcaaattgttaggtgtaccatagaatttgcca 27956376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 35468919 - 35468956
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||| |||||||||||||||||||||||||||    
T  35468919 tgtattgccatctaaggatgtctatgtatcattactct 35468956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36362069 - 36362024
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||    
T  36362069 caaaggatgtattaccacctaagggtgtctatgtatcattactcta 36362024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 18990150 - 18990090
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||  |||| |||||||||||||||||||||| || | ||||||||| |||||||||    
T  18990150 taatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcca 18990090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 26296686 - 26296642
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||    
T  26296686 aaagggtatattgtcacctaaggatgtctatgtatcataactcta 26296642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 30624070 - 30624134
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    ||||||||  ||| |||||||||||||||||||||| |||| ||||||||| || ||||| ||||    
T  30624070 taatttaaaaatttggtgtaccaatacactcaaattattgggtgtaccatagaacttgccttatt 30624134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40957750 - 40957706
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||    
T  40957750 caaagagtgtattgccacctaagagtgtctatgtatcattactct 40957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 41381553 - 41381497
Alignment:
Q  48 tttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||| |||| | ||||||||||||||||||||||| | ||||||||| ||||||||    
T  41381553 tttaaagatttgatgtaccaatacactcaaattgtttggtgtaccatataatttgcc 41381497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 46033859 - 46033903
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||||||||||||||||||| || |||||||||||| ||||||    
T  46033859 aaagggtgtattgccacctaagaatatctatgtatcataactcta 46033903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4999571 - 4999614
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| |||||||||||| |||||| |||||||||||||||||||    
T  4999571 caaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 18207218 - 18207179
Alignment:
Q  6 ggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  18207218 ggtgtattgccacctaaggttgtctatgtatcataactct 18207179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38267083 - 38267040
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||    
T  38267083 caaagggtgtattgtcacataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 40846174 - 40846213
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  40846174 gggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 42710990 - 42710931
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| ||||||||||| |||| ||||| || ||||||||||| ||||||||    
T  42710990 taatttaagaatttggtgtaccaatgcacttaaattattagatgtaccatagaatttgcc 42710931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 44964168 - 44964231
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    |||||||| |||| | |||||||||||||||||||  || | ||||||||| ||||||||||||    
T  44964168 taatttaatgatttgttgtaccaatacactcaaatctttaggtgtaccatataatttgccatat 44964231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 45857821 - 45857880
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| |||||||||||||||||| ||  |||| ||||||||| ||||||||    
T  45857821 taatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 45857880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 10343626 - 10343664
Alignment:
Q  7 gtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  10343626 gtgtatttccacctaagggtgtctatgtatcattactct 10343664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 27800384 - 27800434
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||| ||||||||  |||||||||||| |||||||||||||| ||||||||    
T  27800384 gatttggtgtaccggtacactcaaatttttggatgtaccatagaatttgcc 27800434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 39255985 - 39256023
Alignment:
Q  6 ggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  39255985 ggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 1343064 - 1343019
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  ||||||||||||||||| ||||||||| ||||||||    
T  1343064 ggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 1343019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 3784031 - 3783998
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcatta 41  Q
    ||||||||||||||||| ||||||||||||||||    
T  3784031 tgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 12395239 - 12395194
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  |||||||||| |||||| ||||||||||||||||||    
T  12395239 ggtgtaccggtacactcaaaatgttgggtgtaccataaaatttgcc 12395194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 22343400 - 22343359
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||||||||||||||||| ||| |||||||||| ||||||    
T  22343400 gggtgtattgccacctaagggtgtttatgtatcataactcta 22343359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 25411987 - 25412032
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  |||||||||| |||||||||||||||| ||||||||    
T  25411987 ggtgtaccggtacactcaaaatgttggatgtaccatacaatttgcc 25412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 30891338 - 30891277
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcca 105  Q
    |||||||| || || |||||||| ||||||||||| | |||||||||||||| |||||||||    
T  30891338 taatttaaagagtgagtgtaccagtacactcaaatatattggatgtaccatagaatttgcca 30891277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 35522914 - 35522881
Alignment:
Q  6 ggtgtattgccacctaaggatgtctatgtatcat 39  Q
    ||||||||||||| ||||||||||||||||||||    
T  35522914 ggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 41915780 - 41915739
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||||||||||||||||| ||| |||||||||| ||||||    
T  41915780 gggtgtattgccacctaagggtgtttatgtatcataactcta 41915739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 43069139 - 43069074
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 110  Q
    ||||||||  ||| ||||||||||||||||||| |  || | |||||||||||||||||| |||||    
T  43069139 taatttaataatttggtgtaccaatacactcaagtctttaggtgtaccataaaatttgccttattt 43069074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 45223078 - 45223041
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  45223078 tgtattgccacctaaggatgtatatatatcattactct 45223041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 22904850 - 22904898
Alignment:
Q  56 ttgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||| ||||||  |||||||||| |||||| ||||||||||||||||||    
T  22904850 ttggatgtaccggtacactcaaaatgttgggtgtaccataaaatttgcc 22904898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 38044236 - 38044196
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  38044236 gggtgtattgccacctaagggtgtttatgtatcataactct 38044196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 38129732 - 38129792
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||  ||| |||||||||||||||||||||| |||| | ||||||| || ||||||    
T  38129732 taatttaaaaatttggtgtaccaatacactcaaattattgggtctaccatagaacttgcca 38129792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 42974955 - 42974895
Alignment:
Q  44 ctaatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| |||| ||||||||||| |||||| ||  |||| ||||||||| ||||||||    
T  42974955 ctaatttaatgatttggtgtaccaatgcactcatatgtttgggtgtaccatagaatttgcc 42974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 37498803 - 37498742
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37498803 taatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgccat 37498742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 922189 - 922248
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  922189 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 922248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 31931045 - 31931104
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||    
T  31931045 taatttaaggatttgatgtaccaatacactcaaattgttggatgtaccatagaatttgcc 31931104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 8461873 - 8461935
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||    
T  8461873 taatttaaggatttggtgtaccaatacactcaaatggttggatgtaccatagaagttgccata 8461935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 39190904 - 39190964
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  39190904 taatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaacttgcca 39190964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 27295117 - 27295058
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  27295117 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 27295058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 35305210 - 35305151
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  35305210 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 35305151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 45423668 - 45423609
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||| || |||||    
T  45423668 taatttaaggatttggtgtaccaatacacttaaattgttggatgtaccatagaacttgcc 45423609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 50905640 - 50905581
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||||    
T  50905640 taatttaaggattcggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 50905581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 18641947 - 18641881
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 111  Q
    |||||||||||||  |||||||||||||||||||||||||  ||||||||| || ||||||||||||    
T  18641947 taatttaaggatttagtgtaccaatacactcaaattgttgagtgtaccatagaacttgccatatttt 18641881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 51898740 - 51898786
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaa 47  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  51898740 caaagggtgtattgccacctaaagatgtctatgtatcattactctaa 51898786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2581958 - 2581914
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  2581958 caaagggtgtattgccacctaagggtgtctatgtatcattactct 2581914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 51781451 - 51781507
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||    
T  51781451 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9474933 - 9474976
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  9474933 caaagggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 16482635 - 16482576
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||| ||||| |||| ||||||||| ||||||||    
T  16482635 taatttaaggatttggtgtaccaatacacttaaattattgggtgtaccatagaatttgcc 16482576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27564792 - 27564835
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  27564792 caaaaggtgtattgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 32813289 - 32813246
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  32813289 aaagggtgtattgccacctaaggatgtctatgtatcataactct 32813246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 41073329 - 41073270
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||||||  |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  41073329 taatttaaggattttgtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 41073270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 48616794 - 48616857
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    |||||||  ||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||    
T  48616794 taatttattgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgccatat 48616857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 51369386 - 51369327
Alignment:
Q  47 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||||| |||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  51369386 atttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgccat 51369327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 5956874 - 5956936
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    ||||||||  ||| |||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  5956874 taatttaaaaattcggtgtaccaatacacttaaattgttgggtgtaccatataatttgccata 5956936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 51519841 - 51519791
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 95  Q
    ||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  51519841 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccata 51519791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 633004 - 633057
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    ||||||||||||||||||||||||||| |||  ||||||||| |||||||||||    
T  633004 gattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgccata 633057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23597148 - 23597192
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  23597148 caaagagtgtattgccacctaatgatgtctatgtatcattactct 23597192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 26011298 - 26011346
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  26011298 gattgggtgtatcaatacactcaaatttttgggtgtaccataaaatttg 26011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 33099017 - 33099061
Alignment:
Q  60 gtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  33099017 gtgtaccaatacactcaaattgttgaatgtaccatataatttgcc 33099061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50630501 - 50630453
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaatt 49  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  50630501 caaaggatgtattgccacctaagggtatctatgtatcattactctaatt 50630453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3000362 - 3000319
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  3000362 caaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 28493869 - 28493810
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||| ||||||||| ||||| |||| ||||||||| ||||||||    
T  28493869 taatttaaggatttggtgtaacaatacacttaaattattgggtgtaccatagaatttgcc 28493810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 34256512 - 34256453
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  ||| |||||||| |||||||||||||||||| ||||||||| ||||||||    
T  34256512 taatttaataatttggtgtaccgatacactcaaattgttgggtgtaccatagaatttgcc 34256453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37649241 - 37649198
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  37649241 caaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 38632383 - 38632422
Alignment:
Q  6 ggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  38632383 ggtgtattgccacctaagggtgtctatgtatcattactct 38632422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 46771079 - 46771138
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||| ||||||||||||||||||||| | ||||||||| || |||||    
T  46771079 taatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaacttgcc 46771138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47452377 - 47452420
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  47452377 caaagggtgtattaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48716339 - 48716382
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  48716339 caaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 6520348 - 6520382
Alignment:
Q  61 tgtaccaatacactcaaattgttggatgtaccata 95  Q
    |||||||||||||||||||||||||||||||||||    
T  6520348 tgtaccaatacactcaaattgttggatgtaccata 6520382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44548433 - 44548482
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaattt 50  Q
    |||| ||||||||||||||||| |||||||||||||||||| || |||||    
T  44548433 caaatggtgtattgccacctaaagatgtctatgtatcattaatcaaattt 44548482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 51984993 - 51984936
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||||||| | |||||||||||||||||||| |||  ||||||||| ||||||    
T  51984993 taatttaaggatttgatgtaccaatacactcaaattattgagtgtaccatagaatttg 51984936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 23056824 - 23056768
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||  ||| |||||||||||||||| ||||| |||||||||||||| |||||    
T  23056824 taatttaaaaattcggtgtaccaatacacttaaattattggatgtaccatataattt 23056768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38595197 - 38595153
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||    
T  38595197 caaagggtgtattgccacctaaaggtgtttatgtatcattactct 38595153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 39971616 - 39971676
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||| |||||||| || ||||||    
T  39971616 taatttaagaatttggtataccaatacactcaaattattggacgtaccatagaacttgcca 39971676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 44978928 - 44978868
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||  ||| ||||||||  ||||||||||||||||| ||||||||| |||||||||    
T  44978928 taatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcca 44978868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 45673384 - 45673336
Alignment:
Q  47 atttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 95  Q
    ||||||||||| | |||| |||||||||||||||||||| |||||||||    
T  45673384 atttaaggatttgatgtatcaatacactcaaattgttgggtgtaccata 45673336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 8096968 - 8097003
Alignment:
Q  69 tacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||||| |||||||||||||||||||||||    
T  8096968 tacactcaaatttttggatgtaccataaaatttgcc 8097003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 9166932 - 9166873
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||  |||| |||||||||||||||||||||| |||| ||||| ||| ||||||||    
T  9166932 taatttattgatttggtgtaccaatacactcaaatttttgggtgtactatataatttgcc 9166873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 38262481 - 38262540
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| |||||||||||||||||||||||||   ||||||||| || |||||    
T  38262481 taatttaagaatttggtgtaccaatacactcaaattgttaagtgtaccatagaacttgcc 38262540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 41608554 - 41608593
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  41608554 gggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 46362367 - 46362430
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccata 107  Q
    |||||||| || ||||||||| | ||||||||||| | ||||||||||||||||||||| ||||    
T  46362367 taatttaaagaatgggtgtactagtacactcaaatatattggatgtaccataaaatttgtcata 46362430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 52303072 - 52303013
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| | |||||||||||||||||||| |||| |||| |||| ||||||||    
T  52303072 taatttaagaatttgatgtaccaatacactcaaattattgggtgtatcatagaatttgcc 52303013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 2247126 - 2247064
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    |||||||| |||| |||||||||||||||||||||  || | ||||||||| |||||| ||||    
T  2247126 taatttaatgatttggtgtaccaatacactcaaatctttaggtgtaccatagaatttgtcata 2247064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 44246345 - 44246403
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 103  Q
    ||||||||||||| |||||||||||||| || || | |||||| ||||||| |||||||    
T  44246345 taatttaaggatttggtgtaccaatacattcgaacttttggatataccatagaatttgc 44246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 7122016 - 7121951
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatattt 110  Q
    |||||||| |||| | |||||||||||||||||||  || | | ||||||| ||||||||||||||    
T  7122016 taatttaatgatttgttgtaccaatacactcaaatctttaggtataccatagaatttgccatattt 7121951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 11778983 - 11779040
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    |||||||| |||| | |||||||||||||||||||  |||| ||||||||| ||||||    
T  11778983 taatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatataatttg 11779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 33906369 - 33906312
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatttt 111  Q
    ||||| ||||||||||| ||||||||| || ||||||||||| ||||| || ||||||    
T  33906369 gattgagtgtaccaatatactcaaatttttagatgtaccatataatttaccttatttt 33906312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 34038526 - 34038571
Alignment:
Q  60 gtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 104  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||    
T  34038526 gtgtaccaatacactcaaatatattggatgtaccatagaatttgcc 34038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41758848 - 41758803
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||||||||||||||  ||| | |||||||||||||||||||||    
T  41758848 caaagggtgtattgccatttaatggtgtctatgtatcattactcta 41758803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 42275701 - 42275742
Alignment:
Q  63 taccaatacactcaaat-tgttggatgtaccataaaatttgc 103  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  42275701 taccaatacactcaaatatattggatgtaccataaaatttgc 42275742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 51184101 - 51184044
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    |||||||| |||| | |||||||||||||||||||  |||| ||||||||| ||||||    
T  51184101 taatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatagaatttg 51184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 51787815 - 51787876
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcca 105  Q
    |||||||| || ||||||||||  ||||||||||| | |||||||||||||| |||||||||    
T  51787815 taatttaaagaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgcca 51787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8346445 - 8346489
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||| ||||||||||||||||| | || |||||||||||||||||    
T  8346445 caaatggtgtattgccacctaaaggtgactatgtatcattactct 8346489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 11152437 - 11152476
Alignment:
Q  3 aagggtgtattgccacctaaggatgtctatgtatcattact 43  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  11152437 aagggtgtattgccacctaagg-tgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 24230929 - 24230977
Alignment:
Q  57 tgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 104  Q
    |||||||||| |||||||||||| | |||||||||||||| ||||||||    
T  24230929 tgggtgtaccgatacactcaaatatattggatgtaccatagaatttgcc 24230977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 25493558 - 25493498
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaa-ttgttggatgtaccataaaatttgcc 104  Q
    |||||| | |||| ||||||||||||||| |||| || |||||||||||||| ||||||||    
T  25493558 taattttacgatttggtgtaccaatacacccaaatttattggatgtaccatagaatttgcc 25493498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 26102820 - 26102876
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||||||| |||||| ||||||||| ||||| |||  ||||||||| |||||    
T  26102820 taatttaaggatttggtgtatcaatacacttaaattattgagtgtaccatagaattt 26102876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 35874285 - 35874345
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 104  Q
    |||||||| || || |||||||||||||||||||| | |||| ||||||||| ||||||||    
T  35874285 taatttaaagagtgagtgtaccaatacactcaaatatattgggtgtaccatagaatttgcc 35874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 43146454 - 43146422
Alignment:
Q  69 tacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||||||||||||||||||||| |||||    
T  43146454 tacactcaaattgttggatgtaccatagaattt 43146422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 44382364 - 44382424
Alignment:
Q  46 aatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcca 105  Q
    ||||||||| |  ||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  44382364 aatttaagggtctggtgtaccggtacactcaaatatgttgggtgtaccataaaatttgcca 44382424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49811584 - 49811628
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||| ||||||||| ||||||||||||||||| |||||| |||||    
T  49811584 caaatggtgtattgtcacctaaggatgtctatctatcataactct 49811628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 50534245 - 50534289
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 103  Q
    ||||||||  |||||||||| |||||||||||||||| |||||||    
T  50534245 ggtgtaccggtacactcaaaatgttggatgtaccatagaatttgc 50534289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 50591061 - 50591105
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactctaatt 49  Q
    |||||||||||||||||||| ||| |||||||||| |||| ||||    
T  50591061 gggtgtattgccacctaagggtgtttatgtatcataactcaaatt 50591105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 51873645 - 51873681
Alignment:
Q  69 tacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||||| |||||||||||||||| |||||||||    
T  51873645 tacactcaaaatgttggatgtaccatagaatttgcca 51873681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 13410601 - 13410545
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  13410601 taatttaagaatttggtgtaccaatacactcaaattgttggatgtaccataaaattt 13410545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 6114121 - 6114180
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||    
T  6114121 taatttaaggatttggtggaccaatacactcaaattgttggatgtaccatagaatttgcc 6114180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2740317 - 2740271
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2740317 caaagggtgtattgccacctaaggatgtctatgtatcattactctaa 2740271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 21605707 - 21605644
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  21605707 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgtcatat 21605644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 2318782 - 2318831
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 103  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  2318782 gattgggtgtaccaatacactcaaatttttggatataccataaaatttgc 2318831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 6560885 - 6560828
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||    
T  6560885 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 2029412 - 2029352
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||  |||||||||    
T  2029412 taatttaaggatttggtgtaccaatacacttaaattgttagatgtaccatggaatttgcca 2029352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 43237700 - 43237760
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||| ||| |||||||||||||||||||||| |||| ||||||||| |||||||||    
T  43237700 taatttaagaatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcca 43237760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 1662041 - 1662100
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||||| || |||||    
T  1662041 taatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 1662100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 6532638 - 6532579
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||||||| ||||||||    
T  6532638 taatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaatttgcc 6532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 27116512 - 27116465
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  27116512 gattgggtgtaccaatacactcaaatttttgggtgtaccataaaattt 27116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28177818 - 28177775
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  28177818 caaagggtgtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 34302705 - 34302646
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||||||    
T  34302705 taatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagaatttgcc 34302646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 42917176 - 42917117
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| ||||||||||||||||||||||||||| || |||||| ||||||||    
T  42917176 taatttaagaatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 42917117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 26720558 - 26720516
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  26720558 aaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 26990307 - 26990265
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  26990307 aaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36875660 - 36875702
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattact 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  36875660 caaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 40145449 - 40145407
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  40145449 aaagggtgtattgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 2141301 - 2141237
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    ||||||||| ||| |||||||||||||||||||||| |||| | |||||||||| ||||| ||||    
T  2141301 taatttaagaatttggtgtaccaatacactcaaattattgggtctaccataaaacttgccttatt 2141237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18520941 - 18520981
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcatta 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  18520941 caaagggtgtattgccacctaagggtgtctatgtatcatta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 29743951 - 29743895
Alignment:
Q  48 tttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||    
T  29743951 tttaaggatttggtgtaccaatacacttaaatttttgaatgtaccatataatttgcc 29743895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36732999 - 36733043
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  36732999 caaagggtgtattgctacctaagggtgtctatgtatcattactct 36733043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 4618059 - 4618118
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||  |||| |||||||||||||||||||||| || | ||||||||||||||||||    
T  4618059 taatttattgatttggtgtaccaatacactcaaatttttaggtgtaccataaaatttgcc 4618118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14831857 - 14831814
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  14831857 caaagggtgtattgccacctaagagtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33149695 - 33149738
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  33149695 caaagggtgtattaccacctaagggtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35785242 - 35785199
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  35785242 caaaaggtgtattgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 36409951 - 36409904
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  36409951 ggtgtaccgatacactcaaaatgttgggtgtaccataaaatttgccat 36409904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6679741 - 6679695
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaa 47  Q
    |||| ||||||||||||||||| |||||||||||||||| |||||||    
T  6679741 caaaaggtgtattgccacctaaagatgtctatgtatcataactctaa 6679695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 18228806 - 18228856
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 95  Q
    ||||||||||||| ||| ||||||||||||||||||||| | |||||||||    
T  18228806 taatttaaggatttggtataccaatacactcaaattgttaggtgtaccata 18228856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 36752557 - 36752619
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    |||||||||||||  || ||||| |||||||||||||||||||||||| |  |||||||||||    
T  36752557 taatttaaggattttgtataccactacactcaaattgttggatgtaccgtggaatttgccata 36752619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 2252229 - 2252270
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  2252229 gggtgtattgccacctaaggatgtttatgtatcataactcta 2252270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 12362705 - 12362765
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||  ||||||||||||||||||||| ||||| |||  ||||||||| |||||||||    
T  12362705 taatttattgattgggtgtaccaatacacttaaatttttgagtgtaccatagaatttgcca 12362765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 10356670 - 10356639
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcat 39  Q
    ||||||||||||||||||||||||||||||||    
T  10356670 tgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 15725844 - 15725903
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| ||||||||   ||||||||||||||| || ||||||||||||||||    
T  15725844 taatttaaagatttggtgtaccggaacactcaaattgttgaatttaccataaaatttgcc 15725903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 16433002 - 16433057
Alignment:
Q  49 ttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| |||||||   |||||||||||  |||||||||||||||||||||||    
T  16433002 ttaaggatttggtgtactggtacactcaaataattggatgtaccataaaatttgcc 16433057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 34065003 - 34064960
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||  |||||||||| |||||||||||||||||||||||    
T  34065003 ggtgtaccggtacactcaaaatgttggatgtaccataaaatttg 34064960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 35162410 - 35162351
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| ||||||||| |||||| ||||| |||| ||||||||||| ||||||    
T  35162410 taatttaaagatttggtgtaccagtacacttaaatttttgggtgtaccataaagtttgcc 35162351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 41470474 - 41470521
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactctaatt 49  Q
    ||||| ||||||||||||||| | ||||||||||| ||||||||||||    
T  41470474 aaaggatgtattgccacctaaaggtgtctatgtattattactctaatt 41470521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42414359 - 42414402
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||  | |||||||||||||||||||    
T  42414359 caaagggtgtattgccacctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 3056444 - 3056394
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 95  Q
    ||||||||  ||| |||||||||||||||| |||||||||| |||||||||    
T  3056444 taatttaaaaatttggtgtaccaatacacttaaattgttgggtgtaccata 3056394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 6260059 - 6260109
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactctaatttaa 52  Q
    ||||||||||||| |||||| || ||| ||||||||||||||| |||||||    
T  6260059 aaagggtgtattgtcacctatggttgtgtatgtatcattactcaaatttaa 6260109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 21370053 - 21370019
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcat 39  Q
    ||||||||| |||||||||||||||||||||||||    
T  21370053 gggtgtattaccacctaaggatgtctatgtatcat 21370019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 33145210 - 33145264
Alignment:
Q  48 tttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||| |||| |||||||||||||||||| ||| |||| ||||||||| ||||||    
T  33145210 tttaatgatttggtgtaccaatacactcatatttttgggtgtaccatagaatttg 33145264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 9534929 - 9534868
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||| ||| |||||||||||||||||||||| |||  | ||||||| || |||||||    
T  9534929 taatttaagaatttggtgtaccaatacactcaaattattgagtctaccatagaacttgccat 9534868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 13795617 - 13795678
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    |||||||  |||| ||||||||||| |||||||||| || ||||||||||| ||||| ||||    
T  13795617 taatttattgattaggtgtaccaatgcactcaaattttttgatgtaccatagaatttaccat 13795678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 13811688 - 13811651
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  13811688 tgtattgccacctaagggtgtctatgtatctttactct 13811651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 15409674 - 15409711
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  15409674 tgtattgtcacctaaggatgtctatgtatcataactct 15409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 33825387 - 33825424
Alignment:
Q  7 gtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  33825387 gtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 480021 - 480081
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 104  Q
    |||||||| || || ||||||| |||||||||||| |  ||||||||||||||||||||||    
T  480021 taatttaaagagtgagtgtaccgatacactcaaatatactggatgtaccataaaatttgcc 480081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 3921326 - 3921366
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  3921326 gggtgtattgccacctaagggtgtttatgtatcataactct 3921366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 6335435 - 6335387
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    ||||||||  |||||||||| |||||| ||||||||| |||||||||||    
T  6335435 ggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgccata 6335387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 21051651 - 21051711
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||  |||| |||||||||||||| ||||||  || ||||||||||| |||||||||    
T  21051651 taatttattgatttggtgtaccaatacattcaaatctttagatgtaccatagaatttgcca 21051711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 23408311 - 23408255
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    ||||||||  ||| ||||||||  ||||||||||||||||| ||||||||| |||||    
T  23408311 taatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatataattt 23408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 28332171 - 28332119
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttgga-tgtaccataaaatttgcca 105  Q
    |||| |||||||||||||||||||||| || || ||||||||| |||||||||    
T  28332171 gatttggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcca 28332119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 35943956 - 35943992
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  35943956 tgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 42067638 - 42067579
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42067638 taatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 42067579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 38785429 - 38785489
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||    
T  38785429 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatataatttgcca 38785489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 876569 - 876628
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| ||||||||    
T  876569 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatataatttgcc 876628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 11140306 - 11140247
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  11140306 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 11140247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 29786944 - 29787003
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29786944 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 42364274 - 42364333
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  42364274 taatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 44670605 - 44670667
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccata 107  Q
    |||||||||||||  |||||||||||||||||||||||||| |||||| || |||||||||||    
T  44670605 taatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccttagaatttgccata 44670667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11095410 - 11095454
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  11095410 caaagggtgtattgccacctaagggtgtctatgtatcattactct 11095454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 19547539 - 19547487
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  19547539 gattgggtgtaccgatacactcaaatttttggatgtaccatagaatttgccat 19547487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 29347607 - 29347663
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  29347607 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 29347663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49607457 - 49607413
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  49607457 caaagggtgtattgccacctaagggtgtctatgtatcattactct 49607413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 14623900 - 14623939
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14623900 gggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 27079726 - 27079785
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||| || |||||    
T  27079726 taatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 27079785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 27082693 - 27082752
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||| || |||||    
T  27082693 taatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 27082752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 31308936 - 31308877
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||| ||||||||||||||||||| | ||||||||| ||||||||    
T  31308936 taatttaaggatttggtgttccaatacactcaaattgttaggtgtaccatagaatttgcc 31308877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 35171540 - 35171599
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||||||| || |||||    
T  35171540 taatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 35171599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 39630238 - 39630297
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  ||| ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  39630238 taatttaaaaattcggtgtactaatacactcaaattgttggatgtaccatagaatttgcc 39630297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 40650126 - 40650067
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||| || |||||    
T  40650126 taatttaaggatttggtgtaccaatacactcaaattgttagttgtaccatagaacttgcc 40650067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 53982054 - 53982011
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  53982054 caaagggtgtattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 379224 - 379274
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccata 95  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  379224 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccata 379274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 21746247 - 21746289
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactctaattt 50  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  21746247 tgtattgccacctaaggatgtatatgtatcattactctaattt 21746289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24700011 - 24700057
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactctaa 47  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||    
T  24700011 caaaaggtgtattgccaactaaggatgtctatgtatcattactctaa 24700057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 26141590 - 26141632
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  26141590 aaagggtgtattgccacctaaggatgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8956805 - 8956760
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||    
T  8956805 caaaggatgtattgccacataaggatgtctatgtatcattactcta 8956760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35536669 - 35536624
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  35536669 caaatggtgtattgccacataaggatgtctatgtatcattactcta 35536624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 25592353 - 25592413
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||  |||| |||||| ||||||||||||||| |||||||||||||| |||||||||    
T  25592353 taatttattgatttggtgtatcaatacactcaaatttttggatgtaccatataatttgcca 25592413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 43715104 - 43715156
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    |||| ||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  43715104 gatttggtgtaccaatacacccaaatttttggatgtaccatagaatttgccat 43715156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54868952 - 54868996
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  54868952 caaaaggtgtattgccacctaagggtgtctatgtatcattactct 54868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33644243 - 33644200
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  33644243 caaagggtgtattgccacccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 42848553 - 42848615
Alignment:
Q  45 taatttaaggattgggtgt--accaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    ||||||||||||| |||||  |||||||||||||||||||||| ||||||||| || ||||||    
T  42848553 taatttaaggatttggtgtgcaccaatacactcaaattgttgggtgtaccatagaacttgcca 42848615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 44365680 - 44365621
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||| ||| |||||||||||||||| |||||||||| |||| |||| ||||||||    
T  44365680 taatttaagaatttggtgtaccaatacacttaaattgttgggtgtatcatagaatttgcc 44365621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 45636148 - 45636089
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  ||| ||||||||||||||||||||||||||| |||||| || ||||||||    
T  45636148 taatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccctagaatttgcc 45636089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 47470487 - 47470428
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||| |||||||||| ||| ||||||||| ||||||| |||||    
T  47470487 taatttaaggatttggtgtactaatacactcacattcttggatgtagcataaaacttgcc 47470428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 7671852 - 7671806
Alignment:
Q  55 attgggtgtaccaatacactcaaattgttggatgtaccataaaattt 101  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||||    
T  7671852 attgggtgtaccaatacactcaaatttttgggtgtaccatagaattt 7671806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 27647528 - 27647478
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||||||||||||||||| |||  ||||||||| ||||||||    
T  27647528 gattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 27647478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52629343 - 52629305
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  52629343 caaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 53516937 - 53516991
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    ||||||||||||||||||||||||||| ||   ||||||||| ||||||||||||    
T  53516937 gattgggtgtaccaatacactcaaatttttaagtgtaccatagaatttgccatat 53516991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 8965974 - 8965914
Alignment:
Q  46 aatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcca 105  Q
    |||||||||||  ||||||||| ||||||||||| ||||||||||||| || |||||||||    
T  8965974 aatttaaggatctggtgtaccagtacactcaaatatgttggatgtaccgtagaatttgcca 8965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11347979 - 11348023
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||| ||||||| |||||||||||||||||||||||| |||||    
T  11347979 caaaggatgtattgtcacctaaggatgtctatgtatcataactct 11348023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 14998506 - 14998558
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    |||| ||||||||  |||||||||||| |||| ||||||||||||||||||||    
T  14998506 gatttggtgtaccggtacactcaaatttttgggtgtaccataaaatttgccat 14998558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 17470443 - 17470403
Alignment:
Q  6 ggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  17470443 ggtgtattgccacctaaaggtgtctatgtatcattactcta 17470403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27714948 - 27714992
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||    
T  27714948 caaagggtgtattaccacctaaaggtgtctatgtatcattactct 27714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33118908 - 33118952
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||    
T  33118908 caaagggtgtattgtcacctaagggtgtctatgtatcataactct 33118952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36707481 - 36707525
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||    
T  36707481 caaagggtgtattgtcacctaagggtatctatgtatcattactct 36707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8076436 - 8076393
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||    
T  8076436 caaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 24397419 - 24397372
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||  |||||||||| |||||||||||||||| ||||||||||    
T  24397419 ggtgtaccggtacactcaaaatgttggatgtaccatagaatttgccat 24397372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 47948742 - 47948801
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||| |||| |||||||||| |||| |||| || |||||    
T  47948742 taatttaaggatttggtgtaccaatgcacttaaattgttgggtgtatcatagaacttgcc 47948801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 48587148 - 48587187
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcatt 40  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  48587148 caaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 13898116 - 13898154
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattact 43  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  13898116 gggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 21289169 - 21289219
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| ||||||||||||| |||  ||||||||| ||||||||    
T  21289169 gattgggtgtacctatacactcaaatttttgagtgtaccatagaatttgcc 21289219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 28146686 - 28146728
Alignment:
Q  69 tacactcaaattgttggatgtaccataaaatttgccatatttt 111  Q
    |||||||||| |||||||||||||||| ||||||||| |||||    
T  28146686 tacactcaaaatgttggatgtaccatagaatttgccaaatttt 28146728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31456732 - 31456690
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattact 43  Q
    |||||||||||||||| |||| || ||||||||||||||||||    
T  31456732 caaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 40021139 - 40021077
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccat 106  Q
    |||||||| || ||| ||||||| ||||||||||| | |||||||||||||| ||||||||||    
T  40021139 taatttaaagagtggatgtaccagtacactcaaatatattggatgtaccatagaatttgccat 40021077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 47531903 - 47531865
Alignment:
Q  6 ggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  47531903 ggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 39540714 - 39540673
Alignment:
Q  61 tgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||| |||||||||| |||||||||||||||| ||||||    
T  39540714 tgtaccagtacactcaaaatgttggatgtaccatagaatttg 39540673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 41189828 - 41189865
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  41189828 tgtattgccacctaaggatgtatatgtatcataactct 41189865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 45058611 - 45058652
Alignment:
Q  3 aagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||| ||| |||||||||| ||||    
T  45058611 aagggtgtattgccacctaagggtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 16136969 - 16137029
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 104  Q
    |||||||| || ||| |||||| |||||||||||| | |||||||||||||| ||||||||    
T  16136969 taatttaaagagtggatgtaccgatacactcaaatatattggatgtaccatagaatttgcc 16137029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 26409966 - 26410026
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattg-ttggatgtaccataaaatttgcc 104  Q
    |||||||| || | |||||||| |||||| ||||||  |||||||||||||||||||||||    
T  26409966 taatttaatgaattggtgtaccgatacacccaaatttattggatgtaccataaaatttgcc 26410026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 26754736 - 26754700
Alignment:
Q  3 aagggtgtattgccacctaaggatgtctatgtatcat 39  Q
    |||||||||||||||||||||| |||||||| |||||    
T  26754736 aagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 26885318 - 26885378
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 104  Q
    |||||||| || | |||||||| |||||||||||| | |||| ||||||||||||||||||    
T  26885318 taatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 26885378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 42622196 - 42622256
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgcc 104  Q
    |||||||| || ||||||||||  ||||||||||| | |||| ||||||||||||||||||    
T  42622196 taatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaatttgcc 42622256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 24212971 - 24212912
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||    
T  24212971 taatttaaggatttagtgtaccaatacactcaaatggttggatgtaccatagaatttgcc 24212912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 2258962 - 2258905
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||    
T  2258962 taatttaaggatttagtgtaccaatacactcaaattgttgggtgtaccatagaatttg 2258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 4901296 - 4901353
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    |||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||    
T  4901296 taatttaaggatttaatgtaccaatacactcaaattgttagatgtaccataaaatttg 4901353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 17545664 - 17545607
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  17545664 taatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 17545607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31110816 - 31110860
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  31110816 caaagggtgtattgccacctaaggatgtctatgtatcataactct 31110860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 8401763 - 8401822
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| ||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  8401763 taatttaaagatttggtgtacgaatacactcaaatggttggatgtaccatataatttgcc 8401822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 13390444 - 13390385
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || |||||    
T  13390444 taatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 13390385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 26315506 - 26315447
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  ||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  26315506 taatttaataatttggtgtaccggtacactcaaattgttggatgtaccataaaatttgcc 26315447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 26358900 - 26358959
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||||||| || |||||    
T  26358900 taatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 26358959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 6848569 - 6848508
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    |||||||||||||  || ||||||| ||||||||||||||| ||||||||| ||||||||||    
T  6848569 taatttaaggattttgtataccaatgcactcaaattgttgggtgtaccatagaatttgccat 6848508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 24487634 - 24487683
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccat 94  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  24487634 taatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccat 24487683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 22422084 - 22422120
Alignment:
Q  10 tattgccacctaaggatgtctatgtatcattactcta 46  Q
    |||||||||||||||||||||||||||||||||||||    
T  22422084 tattgccacctaaggatgtctatgtatcattactcta 22422120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22880715 - 22880755
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcatta 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  22880715 caaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 31976290 - 31976246
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactcta 46  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  31976290 aaagggtatattgccacctaaggatgtctatgtatcataactcta 31976246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 10888173 - 10888216
Alignment:
Q  61 tgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  10888173 tgtaccagtacactcaaattgttggatgtaccatataatttgcc 10888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 15383551 - 15383610
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||  |||| ||| |||||||||||||||||| |||||||||||||| ||||||||    
T  15383551 taatttactgatttggtataccaatacactcaaatttttggatgtaccatataatttgcc 15383610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 31953091 - 31953130
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  31953091 gggtgtattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 32834121 - 32834180
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    |||||||| |||| |||||||||||||||||||||| || | ||||||||| ||||||||    
T  32834121 taatttaatgatttggtgtaccaatacactcaaattattaggtgtaccatagaatttgcc 32834180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32869721 - 32869678
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  32869721 caaagggtgtattgccacctaagggtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 6209528 - 6209566
Alignment:
Q  7 gtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6209528 gtgtattgccacctaagggtgtctatgtatcattactct 6209566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 7344677 - 7344727
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatatt 109  Q
    ||||||||  ||||||||||||||||| ||||||||| |||||||||||||    
T  7344677 ggtgtaccggtacactcaaattgttgggtgtaccatagaatttgccatatt 7344727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 926583 - 926542
Alignment:
Q  61 tgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||| |||||||||| |||||||||||||||||||||||    
T  926583 tgtaccagtacactcaaaatgttggatgtaccataaaatttg 926542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 17598590 - 17598554
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||| |||||||||||||||||||    
T  17598590 tgtattgccacctaagggtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 11446795 - 11446732
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccatat 108  Q
    |||||||  |||| |||||||||||||||||| ||  |||| ||||||||| ||||||||||||    
T  11446795 taatttattgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgccatat 11446732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31109457 - 31109500
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    |||||||||||||||||||||||| |||||||  ||||||||||    
T  31109457 caaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 946419 - 946377
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattact 43  Q
    |||||||||||||  |||||||||||||||||||||| |||||    
T  946419 caaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 14501071 - 14501026
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||  |||||||||| |||||||||||||||| ||||||||    
T  14501071 ggtgtaccggtacactcaaaatgttggatgtaccatataatttgcc 14501026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 15990103 - 15990148
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactctaattt 50  Q
    |||||||||||||||||||| ||| |||||||||| ||||| ||||    
T  15990103 gggtgtattgccacctaagggtgtttatgtatcataactcttattt 15990148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 8376385 - 8376429
Alignment:
Q  59 ggtgtaccaatacactcaaattgttggatgtaccataaaatttgc 103  Q
    |||||||||||||| |||||||  | |||||||||||||||||||    
T  8376385 ggtgtaccaatacattcaaatttgtagatgtaccataaaatttgc 8376429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 11273779 - 11273823
Alignment:
Q  60 gtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||| ||||||||||| |||| ||||||||||| ||||||||    
T  11273779 gtgtaccgatacactcaaaatgttagatgtaccatagaatttgcc 11273823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11427661 - 11427614
Alignment:
Q  1 caaagggtgtattgccacctaag--gatgtctatgtatcattactcta 46  Q
    |||||| ||||||||||||||||  | |||||||||||||||||||||    
T  11427661 caaaggatgtattgccacctaagagggtgtctatgtatcattactcta 11427614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 28536550 - 28536582
Alignment:
Q  8 tgtattgccacctaaggatgtctatgtatcatt 40  Q
    ||||||||||||||||||||| |||||||||||    
T  28536550 tgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 28536678 - 28536714
Alignment:
Q  9 gtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  28536678 gtattgccacctaaggatgtatatgtatcatttctct 28536714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 30341421 - 30341461
Alignment:
Q  5 gggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  30341421 gggtgtattgccacctaagggtgtttatgtatcataactct 30341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 36956 - 37015
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcc 104  Q
    ||||||||||||| |||||| |||||||||||||||||||  ||||||||| ||||||||    
T  36956 taatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 37015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 987 - 1029
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  987 aaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 987 - 1029
Alignment:
Q  2 aaagggtgtattgccacctaaggatgtctatgtatcattactc 44  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  987 aaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 29295 - 29243
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgccat 106  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||||| ||||    
T  29295 gattgggtgtaccaatacactcaaatttttgggtgtaccattaaatttaccat 29243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 6610 - 6670
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattgttggatgtaccataaaatttgcca 105  Q
    |||||||  |||| |||||||||||||||||||||| || | ||||||||| |||||||||    
T  6610 taatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcca 6670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 2070 - 2022
Alignment:
Q  54 gattgggtgtaccaatacactcaaattgttggatgtaccataaaatttg 102  Q
    ||||||||||||||||||||||||||| |||  ||||||||| ||||||    
T  2070 gattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttg 2022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 48069 - 48033
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaattg 81  Q
    ||||||||||||| |||||||||||||||||||||||    
T  48069 taatttaaggatttggtgtaccaatacactcaaattg 48033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 16929 - 16994
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccatatt 109  Q
    |||||||| || || ||||||| |||||||||||| | |||| ||||||||| |||||||||||||    
T  16929 taatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgccatatt 16994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 55915 - 55850
Alignment:
Q  45 taatttaaggattgggtgtaccaatacactcaaat-tgttggatgtaccataaaatttgccatatt 109  Q
    |||||||| || || ||||||| |||||||||||| | |||| ||||||||| |||||||||||||    
T  55915 taatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgccatatt 55850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10166 - 10210
Alignment:
Q  1 caaagggtgtattgccacctaaggatgtctatgtatcattactct 45  Q
    |||||| ||||||||||||||| | |||||||||||||| |||||    
T  10166 caaaggatgtattgccacctaaaggtgtctatgtatcataactct 10210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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