View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20496_low_5 (Length: 576)

Name: NF20496_low_5
Description: NF20496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20496_low_5
NF20496_low_5
[»] chr7 (8 HSPs)
chr7 (317-557)||(7143728-7143966)
chr7 (161-318)||(7142483-7142642)
chr7 (13-162)||(7141340-7141489)
chr7 (229-318)||(9405377-9405466)
chr7 (174-317)||(10670060-10670205)
chr7 (199-326)||(9070895-9071025)
chr7 (251-313)||(26839717-26839779)
chr7 (201-279)||(3400295-3400375)
[»] chr4 (6 HSPs)
chr4 (166-318)||(47024273-47024427)
chr4 (192-318)||(17024449-17024577)
chr4 (179-318)||(10451002-10451145)
chr4 (258-318)||(12806479-12806539)
chr4 (179-273)||(10319794-10319890)
chr4 (199-318)||(15192700-15192820)
[»] chr5 (5 HSPs)
chr5 (174-310)||(26329585-26329723)
chr5 (227-318)||(12265126-12265217)
chr5 (227-317)||(20715083-20715172)
chr5 (237-317)||(17028776-17028857)
chr5 (199-292)||(25681066-25681161)
[»] scaffold0650 (1 HSPs)
scaffold0650 (179-318)||(5257-5398)
[»] chr3 (4 HSPs)
chr3 (180-317)||(13911745-13911884)
chr3 (208-292)||(33578234-33578320)
chr3 (255-315)||(33914126-33914186)
chr3 (199-292)||(19218745-19218839)
[»] chr1 (4 HSPs)
chr1 (174-318)||(26657936-26658082)
chr1 (206-317)||(23519259-23519370)
chr1 (203-317)||(12810635-12810751)
chr1 (199-261)||(34533099-34533163)
[»] chr8 (4 HSPs)
chr8 (229-318)||(22892762-22892851)
chr8 (229-318)||(11309814-11309903)
chr8 (227-315)||(32239765-32239853)
chr8 (203-318)||(28900845-28900962)
[»] chr6 (2 HSPs)
chr6 (227-317)||(17860003-17860094)
chr6 (227-318)||(30235890-30235981)
[»] scaffold0282 (1 HSPs)
scaffold0282 (179-318)||(22140-22281)


Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 317 - 557
Target Start/End: Original strand, 7143728 - 7143966
Alignment:
Q  317 tcaaggtatgaacgaatcttggaaagcatcggtagaagctaacatagaggctttggagcaacttgcagaggtacgacattagatggatctgctagatctc 416  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7143728 tcaaggtatgaaggaatctaggaaagcatcggtagaagctaacatagaggctttggagcaacttgcagaggtacgacattagatggatctgctggatctc 7143827  T
Q  417 agatgcaatcctcagaggcagtttcctcctacaataccaccaacaattgttgatgttgtcccatagatcgatgagnnnnnnnnccattggataagaattc 516  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||    
T  7143828 agatgcaatcctcagaggcagtttcctgctacaataccaccaacaattgttgatgttgtcccatagatcaatgag--ttttttccattggataagaattc 7143925  T
Q  517 ttactatgtattgcttgctcttgaacatctgatcatcaata 557  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7143926 ttactatgtattgcttgctcttgaacatctgatcatcaata 7143966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 7142483 - 7142642
Alignment:
Q  161 agtgcaaaagactagttctcttctcctacatcctacccaatcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggtt 258  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||  |||||||||||||||||||||| ||||||    
T  7142483 agtgcaaaagactagttctcttctcctacatcctacctaatcatttgctataaatagagactcttgcactcattattattcatttagaacactgacggtt 7142582  T
Q  259 caagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7142583 caagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctctc 7142642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 7141340 - 7141489
Alignment:
Q  13 attatactcgtatgacatctaggcgtggtagatagtgaggagacattgctctcatttcaagtctcctcaaggttgtgaaggttttgttgcttctctgatc 112  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  7141340 attatactcgtatgacatctaggcgtggtaggtaatggggagacattgctctcatttcacgtctcctcaaggttgtgaaggttttgttgctactctgatc 7141439  T
Q  113 acttcctatttcacaaacattttagaaaatctgcaatattctgatttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7141440 acttcctatttcacaaacattttagaaaatctgcaatattctgatttaag 7141489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 9405466 - 9405377
Alignment:
Q  229 cattattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    ||||||| |||||| |||||| |||||||||||||||| |||||||| | |||||||||||||| ||||| |||||||||||||||||||    
T  9405466 cattatttttcattcagaacaataacggttcaagacaagggtcaaacgtcagagcttcaaggcaggatttattccttctcttgttctctc 9405377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 317
Target Start/End: Complemental strand, 10670205 - 10670060
Alignment:
Q  174 agttctcttctcctacatcctacccaatcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaagacaaaggtc 271  Q
    |||| |||||||||| | ||||||||||||||| |||||||||||||| | |||||  |||||| |||||| | |||| | | |||||||  ||| ||||    
T  10670205 agttatcttctcctaaaccctacccaatcattttctataaatagagacccttgcactcattatttttcattcaaaacattgatggttcaaagcaagggtc 10670106  T
Q  272 aaacattagagcttcaaggcaagatttcttccttctcttgttctct 317  Q
    |||||| || ||||||||||| ||||| ||| ||||||||||||||    
T  10670105 aaacatcagggcttcaaggcaggatttattcgttctcttgttctct 10670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 9070895 - 9071025
Alignment:
Q  199 aatcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagat 296  Q
    |||| ||| |||||||||||||| | |||||  ||||||||||||| | |||||  ||||||||||  ||| ||||| ||| |||||||||||||| |||    
T  9070895 aatccttttctataaatagagacccttgcacttattattattcattcaaaacaccgacggttcaaggaaaatgtcaagcatcagagcttcaaggcatgat 9070994  T
Q  297 ttcttccttctcttgttctctc-aaggtatg 326  Q
    |||||||||||||| ||||||| ||||||||    
T  9070995 ttcttccttctcttcttctctctaaggtatg 9071025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 26839779 - 26839717
Alignment:
Q  251 taacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgtt 313  Q
    |||||||||||| ||| |||||| ||| |||||||||||||| ||||||||| ||||||||||    
T  26839779 taacggttcaaggcaagggtcaagcatcagagcttcaaggcaggatttcttcattctcttgtt 26839717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 3400295 - 3400375
Alignment:
Q  201 tcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaagacaaaggtcaaacatta 279  Q
    |||| |||||||||||||||||| |||||  ||| ||||||||||||||  ||||||||||||| | | |||||| |||||    
T  3400295 tcatatgctataaatagagactcttgcacgcattcttattcatttagaaatctaacggttcaaggcgagggtcaagcatta 3400375  T

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Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 166 - 318
Target Start/End: Complemental strand, 47024427 - 47024273
Alignment:
Q  166 aaaagactagttctcttctcctacatcctacccaatcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaaga 263  Q
    ||||| |||| | |||||||||||| ||||   ||| |||| |||||||||||||| | |||||  |||||||||||||||||||| | |||||||||||    
T  47024427 aaaagtctagatttcttctcctacaccctaattaattattttctataaatagagacccttgcactaattattattcatttagaacattgacggttcaaga 47024328  T
Q  264 caaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    ||| |||||| ||| | ||| ||||||||||||||||||||||||||||||||||    
T  47024327 caagggtcaagcatcaaagcctcaaggcaagatttcttccttctcttgttctctc 47024273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 192 - 318
Target Start/End: Complemental strand, 17024577 - 17024449
Alignment:
Q  192 cctacccaatcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaag 289  Q
    |||||| |||||||  |||||||||||||| | | |||  ||||||||||||| |||||| | |||||||||| ||| |||||| |||  ||||| ||||    
T  17024577 cctacctaatcattcactataaatagagacccttacactcattattattcattcagaacattgacggttcaaggcaagggtcaagcatcggagctccaag 17024478  T
Q  290 gcaagatttcttccttctcttgttctctc 318  Q
    ||||||||||||| |||||||||||||||    
T  17024477 gcaagatttcttctttctcttgttctctc 17024449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 179 - 318
Target Start/End: Complemental strand, 10451145 - 10451002
Alignment:
Q  179 tcttctcctacatcctacccaatcatttgctataaatagagactcgtg--cacattattattcatttag-aacac-taacggttcaagacaaa-ggtcaa 273  Q
    |||||||||| | ||||||||||||||| |||||||| ||||||| ||  | |||||||||||||| || ||||| | ||||||  || |||| ||||||    
T  10451145 tcttctcctaaaccctacccaatcattttctataaattgagactcttgctctcattattattcattcagaaacacttgacggttggaggcaaagggtcaa 10451046  T
Q  274 acattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    |||| |||||||||||||| || ||||||||||| ||||||||||    
T  10451045 acatcagagcttcaaggcagga-ttcttccttcttttgttctctc 10451002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 12806539 - 12806479
Alignment:
Q  258 tcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    |||||| ||||||||||||| ||||||||||| ||| ||||||||||| | ||||||||||    
T  12806539 tcaagaaaaaggtcaaacatcagagcttcaagacaatatttcttccttttgttgttctctc 12806479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 10319890 - 10319794
Alignment:
Q  179 tcttctcctacatcctacccaatcatttgctataaatagagactcgtgca--cattattattcatttagaacactaacggttcaagacaaaggtcaa 273  Q
    |||||||||| | |||||| |||||||||||||||||||||||   || |  ||||||| |||||  ||||||||||||||| ||| ||| ||||||    
T  10319890 tcttctcctaaaccctacctaatcatttgctataaatagagacatttgaattcattatttttcatccagaacactaacggttgaaggcaagggtcaa 10319794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 15192700 - 15192820
Alignment:
Q  199 aatcatttgctataaatagagactcgtgcac--attattattcatttagaa-cactaacggttcaagacaaaggtcaaacattagagcttcaaggcaaga 295  Q
    |||||||| ||||||||||||| || || ||  ||||||||||||| |||| || | ||| | |||| ||| |||||| |||||||||||||||| |||     
T  15192700 aatcattttctataaatagagattcttgtacccattattattcattcagaaacattgacgat-caaggcaagggtcaagcattagagcttcaagg-aagg 15192797  T
Q  296 tttcttccttctcttgttctctc 318  Q
     |||||| |||||||||||||||    
T  15192798 attcttcgttctcttgttctctc 15192820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 26329723 - 26329585
Alignment:
Q  174 agttctcttctcctacatcctacccaatcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaagacaaaggtc 271  Q
    |||| |||||||||| | ||||||||||| |||||||||||||||  | | |||||  |||||| | ||| ||||||||||| |||||||| ||| ||||    
T  26329723 agttttcttctcctaaaccctacccaatcgtttgctataaatagatgcccttgcactcattattttccatatagaacactaatggttcaaggcaagggtc 26329624  T
Q  272 aaacattagagcttcaaggcaagatttcttccttctctt 310  Q
    || |||||||||||||||||| |||||||||||||||||    
T  26329623 aagcattagagcttcaaggcaggatttcttccttctctt 26329585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 12265217 - 12265126
Alignment:
Q  227 cacattattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    |||| ||||||||||||||||  | | |||||||||  || |||||| ||| |||| ||||||| | |||||||||||||||||||||||||    
T  12265217 cacaatattattcatttagaaagccagcggttcaaggtaatggtcaagcatcagagtttcaaggtaggatttcttccttctcttgttctctc 12265126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 20715083 - 20715172
Alignment:
Q  227 cacattattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctct 317  Q
    ||||| || |||||||||||||| | | |||| ||||||| |||||| ||| |||||||||  |||||| |||||||||||||||||||||    
T  20715083 cacataataattcatttagaacattgatggttaaagacaagggtcaagcatcagagcttcagagcaaga-ttcttccttctcttgttctct 20715172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 17028776 - 17028857
Alignment:
Q  237 ttcatttag-aacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctct 317  Q
    ||||||||| |||| |||| ||||||| ||| |||||||||| |||||||||| |||  |||||||||||  ||||||||||    
T  17028776 ttcatttagtaacattaacagttcaaggcaagggtcaaacatcagagcttcaatgcagtatttcttccttaccttgttctct 17028857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 25681066 - 25681161
Alignment:
Q  199 aatcatttgctataaatagagactcgtg--cacattattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggca 292  Q
    ||||||||||||||||||||||| | ||  |||||||||| | ||| ||||  |||  |||||||| ||| |||||| |||||| | |||||||||    
T  25681066 aatcatttgctataaatagagacacttgcacacattattaattattcagaaagctagtggttcaaggcaagggtcaagcattagggtttcaaggca 25681161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 179 - 318
Target Start/End: Complemental strand, 5398 - 5257
Alignment:
Q  179 tcttctcctacatcctacccaatcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaagacaaaggtcaaaca 276  Q
    |||||||||| | |||||| | | |||  |||||||||||||| | |||||  ||||||||||||| |||||||| |||||||||| ||| |||||| ||    
T  5398 tcttctcctaaaacctacctagttattatctataaatagagacccttgcactcattattattcattaagaacactgacggttcaaggcaagggtcaagca 5299  T
Q  277 ttagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    | |||||||||||||| ||||||||| |||||||||||||||    
T  5298 tcagagcttcaaggcaggatttcttcattctcttgttctctc 5257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 13911745 - 13911884
Alignment:
Q  180 cttctcctacatcctacccaatcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaagacaaaggtcaaacat 277  Q
    ||||||| | ||||||||||||||||| |||||||||||||| | |||||  ||||||||| ||| || ||||| || ||||||| ||| ||||||  ||    
T  13911745 cttctccaaaatcctacccaatcattttctataaatagagacccttgcactcattattattgattgaggacactgacagttcaaggcaagggtcaagtat 13911844  T
Q  278 tagagcttcaaggcaagatttcttccttctcttgttctct 317  Q
     | |||||||||||| ||||| ||||||||||||||||||    
T  13911845 catagcttcaaggcatgattttttccttctcttgttctct 13911884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 33578234 - 33578320
Alignment:
Q  208 ctataaatagagactcgtgcacat--tattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggca 292  Q
    |||||||||||||| | ||||||   | ||||||||||||||  ||| ||||||||| ||| |||||||||||||||||||||||||    
T  33578234 ctataaatagagacacttgcacacacttttattcatttagaaagctagcggttcaaggcaatggtcaaacattagagcttcaaggca 33578320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 33914186 - 33914126
Alignment:
Q  255 ggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttct 315  Q
    |||||||| |||||||||||||| |||| |||| | ||| |||||||||| ||||||||||    
T  33914186 ggttcaaggcaaaggtcaaacatcagagtttcatgacaaaatttcttcctcctcttgttct 33914126  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 19218839 - 19218745
Alignment:
Q  199 aatcatttgctataaatagagactcgtg--cacattattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggca 292  Q
    |||||| | |||||||||||||| | ||  |||||| ||||||||| | ||  ||||||||||||||||| |||||| ||| |||| |||||||||    
T  19218839 aatcatattctataaatagagacccttgtacacattcttattcattaataaagctaacggttcaagacaagggtcaagcatcagag-ttcaaggca 19218745  T

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Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 174 - 318
Target Start/End: Original strand, 26657936 - 26658082
Alignment:
Q  174 agttctcttctcctacatcctacccaatcatttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaagacaaaggtc 271  Q
    |||| |||||||||| | |||||||||||||||| |||||||||| || |  ||||  |||||| || ||| ||||||||  | ||||||| ||| ||||    
T  26657936 agttttcttctcctaaaccctacccaatcatttgttataaatagataccctagcactcattattttttattcagaacactggcagttcaaggcaagggtc 26658035  T
Q  272 aaacattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    || ||| |||||||||||| | ||||||||| |||||||||||||||    
T  26658036 aagcatcagagcttcaaggaatgatttcttcattctcttgttctctc 26658082  T

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Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 23519370 - 23519259
Alignment:
Q  206 tgctataaatagagactcgtgcaca--ttattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttcc 303  Q
    |||||||||||||||| | ||||||  ||||  ||||||||||||| | ||||| | || ||| ||||||||||||||||||||| | | |||| |||||    
T  23519370 tgctataaatagagacccttgcacacattatagttcatttagaacattgacggt-ctaggcaagggtcaaacattagagcttcaacgtaggatt-cttcc 23519273  T
Q  304 ttctcttgttctct 317  Q
    ||||||||||||||    
T  23519272 ttctcttgttctct 23519259  T

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Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 12810635 - 12810751
Alignment:
Q  203 atttgctataaatagagactcgtgcacat--tattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttct 300  Q
    |||| ||||||||||| |||| |||||||  ||||||||||| |||||||| ||  ||||||  || |||||||  | | |||||||||||| |||||      
T  12810635 attttctataaatagaaactcttgcacatattattattcattcagaacactgacaattcaaggaaagggtcaaaactcaaagcttcaaggcaggattttg 12810734  T
Q  301 tccttctcttgttctct 317  Q
    || ||||||||||||||    
T  12810735 tcattctcttgttctct 12810751  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 34533099 - 34533163
Alignment:
Q  199 aatcatttgctataaatagagactcgtgcaca--ttattattcatttagaacactaacggttcaa 261  Q
    |||||| || ||||||||||||||| ||||||  || |||||||||||||| |||||| ||||||    
T  34533099 aatcatatgatataaatagagactcttgcacacattcttattcatttagaaaactaacagttcaa 34533163  T

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Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 22892851 - 22892762
Alignment:
Q  229 cattattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    ||||||| |||||| |||||||  |||||||||| ||| |||||| ||| |||| ||||||| | |||||||||||||||||||||||||    
T  22892851 cattatttttcattcagaacacggacggttcaaggcaagggtcaagcatcagagtttcaaggaaggatttcttccttctcttgttctctc 22892762  T

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Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 11309903 - 11309814
Alignment:
Q  229 cattattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    |||||||||||||| ||||||||    | ||||||||| |||||||||| ||||||||||| |||| | ||||||| |||||||||||||    
T  11309903 cattattattcattcagaacactggaagatcaagacaatggtcaaacatcagagcttcaagacaagttatcttcctcctcttgttctctc 11309814  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 32239765 - 32239853
Alignment:
Q  227 cacattattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttct 315  Q
    |||||||||||| ||| ||||  ||| ||||||||  ||||||||||||||||||| |  ||||||||||||| |||| ||||||||||    
T  32239765 cacattattatttattcagaaagctagcggttcaatgcaaaggtcaaacattagagttcaaaggcaagatttcatcctcctcttgttct 32239853  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 28900962 - 28900845
Alignment:
Q  203 atttgctataaatagagactcgtgcac--attattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttct 300  Q
    |||| ||||||||||||||   |||||  ||||||||   ||||||||||| ||| |||||  |||| || | |||| |||||||||||| | |||||||    
T  28900962 attttctataaatagagaccattgcactcattattatggctttagaacactgacgcttcaaagcaaaagttagacatcagagcttcaaggtaggatttct 28900863  T
Q  301 tccttctcttgttctctc 318  Q
    |||||||  |||||||||    
T  28900862 tccttcttgtgttctctc 28900845  T

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Target: chr6 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 227 - 317
Target Start/End: Complemental strand, 17860094 - 17860003
Alignment:
Q  227 cacattattattcatt-tagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctct 317  Q
    |||||||||||||||| |  |||| | |||||||||  ||| |||||||||| |||||||||||||| |||||||||||||||| |||||||    
T  17860094 cacattattattcattcttaaacattgacggttcaatgcaagggtcaaacatcagagcttcaaggcatgatttcttccttctctggttctct 17860003  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 30235981 - 30235890
Alignment:
Q  227 cacattattattcatttagaacactaacggttcaagacaaaggtcaaacattagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    ||||||||| || ||| |||| |||| |||||||||| || |||||||||| |||| || |||| | ||||||||||| |||||||||||||    
T  30235981 cacattattttttattcagaaaactagcggttcaagaaaagggtcaaacatcagagttttaaggtaggatttcttcctcctcttgttctctc 30235890  T

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Target: scaffold0282 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 318
Target Start/End: Complemental strand, 22281 - 22140
Alignment:
Q  179 tcttctcctacatcctacccaatcatttgctataaatagagactcgtgcac--attattattcatttagaa-cactaacggttcaagacaaaggtcaaac 275  Q
    |||||||||| |||||||||||||||||| | ||| ||||||| | ||| |  |||||| |||||| |||| |||||  | ||||||  | ||||||| |    
T  22281 tcttctcctaaatcctacccaatcatttgatttaactagagacccttgctctcattatttttcattcagaaacactatag-ttcaaggaataggtcaagc 22183  T
Q  276 attagagcttcaaggcaagatttcttccttctcttgttctctc 318  Q
    || |  ||||||||||| ||||||||||||||||| |||||||    
T  22182 atcatcgcttcaaggcaggatttcttccttctcttattctctc 22140  T

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