View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20496_low_73 (Length: 226)
Name: NF20496_low_73
Description: NF20496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20496_low_73 |
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Alignment Details
Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 1300948 - 1300758
Alignment:
| Q |
17 |
attctcttttaacgtgtattttattcacataaatacatctagaaaacttaaaatcaatcttaaattttcatctggtcaatttaagtactctttttaggag |
116 |
Q |
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| T |
1300948 |
attctcttttaacgtgtattttattcacataaatacatctagaaaacttaaaatcaatcttaaattttcatccggtcaatttaagtcctcttttaaggag |
1300849 |
T |
|
| Q |
117 |
gcacgtgttacatctacacataatctggttgaccacatgcatcttctccatccgaaagaggcaccattcttaacaatcttagaaggattac |
207 |
Q |
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| T |
1300848 |
gcacgtgttacatctacacattatctggttgaccacatgcatcttctccatccgaaagaggcaccattcttaacaatcttagaaggattac |
1300758 |
T |
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