View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20497_high_27 (Length: 252)
Name: NF20497_high_27
Description: NF20497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20497_high_27 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 9439407 - 9439174
Alignment:
| Q |
1 |
tattttgtctgcaaggttgaaattggcaagatatagtgttcccatgattcttcttgttcggggagacattcctagtgaacctttcctggctgaactcact |
100 |
Q |
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| T |
9439407 |
tattttgtctgcaaggttgaaattggcaagatatagtgttcccatgattcttcttgttcggggagacattcctagtgaacctttcctggctgaactcact |
9439308 |
T |
|
| Q |
101 |
ggagtcattatgaatggattgaaggacgaggtgaaagttgaacgtaagtgctgggtcgatttccattcctatagagcccaaaaatgttatgttgtcaacc |
200 |
Q |
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| T |
9439307 |
ggagtcagtatgaatggattgaaggacgaggtgaaagttgaacgtaagtgctgggtcgatttccattcctatagagcccaaaaatgttatgttgtcaacc |
9439208 |
T |
|
| Q |
201 |
tgatttaggtttcagctgacagcctgacactgat |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
9439207 |
tgatttaggtttcagctgacagcctgacactgat |
9439174 |
T |
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