View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20498_high_19 (Length: 325)
Name: NF20498_high_19
Description: NF20498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20498_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 40718217 - 40717921
Alignment:
| Q |
18 |
catgctgctgaaacaatttgtctagataaatgttgttaaccaatttaacttaactacttcaattaatagatgaagaattgtaacaacttaaaagtcgaat |
117 |
Q |
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| T |
40718217 |
catgctgctgaaacaatttgtctagataaatgttgttaaccactttaacttaactacttcaattaatagatgaagaattgtaacaacttaaaagtcgaat |
40718118 |
T |
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| Q |
118 |
cacttcaaaaacatgtatacaaataaatttcttgcacacatgcatgcgttgaatcatcatatgaaacacgtaacaaatttatgtttttggggtatagagt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
40718117 |
cacttcaaaaacatgtatacaaataaatttcttgcacacatgcatgcgttgaatcatcatatgaaacacgtaacaaatttatgtttttgaggtatagagt |
40718018 |
T |
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| Q |
218 |
caacacacgcatctaaggaacaccaaaacggtcgagcccgctggcgcgtagtatcatatggtatcccgcgatgcgggctaaagaataatgcaccttt |
314 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40718017 |
caacacacgcatctaaggaacaccaaaactgtcgagcccgctggcgcgtagtatcatatggtatcccgcgatgcgggctaaagaataatgcaccttt |
40717921 |
T |
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