View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20498_low_29 (Length: 267)
Name: NF20498_low_29
Description: NF20498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20498_low_29 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 50530167 - 50530414
Alignment:
| Q |
1 |
aatggcgtaagatagaacaacggaagggccagcgtgaacacgggtagcgtggccagtggtgacgaagactccggcgccgaccattccaccgataccaaag |
100 |
Q |
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| T |
50530167 |
aatggcgtaagatagaacaacggaagggccagcgtgaacacgggtagcgtggccagtggtgacgaagactccggcgccgaccattccaccgataccaaag |
50530266 |
T |
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| Q |
101 |
ctgactaagtcaaaccaacggagggttttgcgcatgctgttaccggacctagctcgaacgcggctcatttcttcgtaagaagtggagacggagaagccgc |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
50530267 |
ctgactaagtcaaaccaacggaggcttttgcgcatgctgttgccggacctagctcgaacacggctcatttcttcgtaagaagtggagacggagaagccgc |
50530366 |
T |
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| Q |
201 |
gacgagcaaagcgagagggagttttagcgacggcttggagatagtttg |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50530367 |
gacgagcaaagcgagagggagttttagcgacggcttggagatagtttg |
50530414 |
T |
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