View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20499_low_1 (Length: 528)

Name: NF20499_low_1
Description: NF20499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20499_low_1
NF20499_low_1
[»] chr3 (55 HSPs)
chr3 (16-512)||(10517374-10517870)
chr3 (16-490)||(11781666-11782140)
chr3 (16-512)||(10527247-10527743)
chr3 (16-270)||(11769365-11769619)
chr3 (16-270)||(10433728-10433982)
chr3 (16-512)||(10500466-10500959)
chr3 (16-269)||(9838993-9839246)
chr3 (16-269)||(9849871-9850124)
chr3 (19-256)||(10663671-10663908)
chr3 (20-256)||(10077414-10077650)
chr3 (16-216)||(10088975-10089175)
chr3 (16-216)||(10195858-10196058)
chr3 (16-267)||(10363482-10363733)
chr3 (307-478)||(10375799-10375970)
chr3 (16-256)||(10032148-10032388)
chr3 (19-270)||(10184373-10184624)
chr3 (16-269)||(10375529-10375782)
chr3 (307-478)||(10031947-10032118)
chr3 (307-478)||(10126872-10127043)
chr3 (16-259)||(10260840-10261083)
chr3 (16-267)||(10580735-10580986)
chr3 (307-478)||(10663470-10663641)
chr3 (16-270)||(10127059-10127313)
chr3 (307-476)||(10363752-10363921)
chr3 (304-476)||(10260644-10260816)
chr3 (339-479)||(11160003-11160143)
chr3 (307-478)||(10580545-10580716)
chr3 (307-476)||(10088736-10088905)
chr3 (307-476)||(10195619-10195788)
chr3 (339-467)||(10889261-10889389)
chr3 (307-478)||(9838805-9838976)
chr3 (307-478)||(9849683-9849854)
chr3 (339-467)||(8861241-8861369)
chr3 (307-467)||(11130980-11131140)
chr3 (307-467)||(11148808-11148968)
chr3 (307-478)||(11769178-11769349)
chr3 (307-469)||(10184195-10184357)
chr3 (19-259)||(13333046-13333286)
chr3 (307-478)||(10077213-10077384)
chr3 (307-478)||(10433998-10434169)
chr3 (19-259)||(13171173-13171413)
chr3 (19-259)||(13344231-13344471)
chr3 (19-266)||(13161115-13161362)
chr3 (19-266)||(13289800-13290047)
chr3 (27-270)||(11130721-11130964)
chr3 (27-104)||(8861583-8861660)
chr3 (27-104)||(11148549-11148626)
chr3 (27-104)||(11159712-11159789)
chr3 (325-467)||(13160935-13161077)
chr3 (325-467)||(13170986-13171128)
chr3 (325-467)||(13332859-13333001)
chr3 (343-467)||(13344044-13344168)
chr3 (325-467)||(13289620-13289762)
chr3 (159-270)||(11148681-11148792)
chr3 (27-104)||(10889603-10889680)
[»] chr4 (1 HSPs)
chr4 (15-510)||(17852606-17853101)
[»] chr8 (3 HSPs)
chr8 (16-508)||(11484931-11485423)
chr8 (232-490)||(44957588-44957846)
chr8 (16-107)||(44957372-44957463)
[»] chr2 (2 HSPs)
chr2 (16-259)||(26907039-26907282)
chr2 (307-478)||(26906841-26907012)
[»] scaffold0002 (5 HSPs)
scaffold0002 (19-259)||(135575-135815)
scaffold0002 (19-259)||(145626-145866)
scaffold0002 (325-467)||(135860-136002)
scaffold0002 (325-467)||(145911-146053)
scaffold0002 (19-114)||(153931-154026)
[»] chr6 (1 HSPs)
chr6 (16-267)||(31679417-31679668)
[»] chr7 (1 HSPs)
chr7 (309-479)||(29836586-29836756)
[»] chr1 (1 HSPs)
chr1 (339-443)||(825887-825991)


Alignment Details
Target: chr3 (Bit Score: 445; Significance: 0; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 16 - 512
Target Start/End: Complemental strand, 10517870 - 10517374
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10517870 aaagaccaacaatcttcatgagatagaggttctaattcctgaataggaaatgtgtgtgccacctctgcaactttttgttggcgcgttgttataatcaccg 10517771  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10517770 aactcccgggttttccatcattgagtggacttactagttcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 10517671  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtatttctaacaactgattcaagg 315  Q
    |  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  10517670 cctcgagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtatttctaacaatagattcaagg 10517571  T
Q  316 agagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagct 415  Q
    | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10517570 atagacttggttgctctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaaact 10517471  T
Q  416 gtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgccaacatctgataccaacatatt 512  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10517470 gtgcaagggtcgttttaccgacgcctcccatacccacaattgcagcaacacctaaattattatttctgcttgtgccaacatctgataccaacatatt 10517374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 16 - 490
Target Start/End: Original strand, 11781666 - 11782140
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  11781666 aaagaccaacaatcttcatgagatagaggttctaatgcatgaataggaaatgtgtgtgccacctctgcaactttttgttggcgagttgttataatcaccg 11781765  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11781766 aacttccaggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 11781865  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtatttctaacaactgattcaagg 315  Q
    |  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| || ||||||| |||||||||    
T  11781866 cctcgagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgaagcagatgatgttgtacttttaacaacagattcaagg 11781965  T
Q  316 agagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagct 415  Q
    ||||||||||||| ||||| |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  11781966 agagacttggttattctaacaacatcgaaatcctccgatacacaaacccagactttgaaatcaaaatgttgttcaactttcacatcattgtaaacaagct 11782065  T
Q  416 gtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgc 490  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  11782066 gtgcaagggtcgttttaccgacgcctcccatacccaaaattgcgacaacacctaaattattatttctgctggtgc 11782140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 512
Target Start/End: Complemental strand, 10527743 - 10527247
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||  |||| | ||| || || ||| |||||||||||| | |||||||| ||||||||| ||||| | |||||||||||||||     
T  10527743 aaagaccaacaatcttcatttgataaaagttttagtttatgtataggaaatgtgcgtgccacctcagcaacttttcgttggtgggttgttataatcacca 10527644  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
     |||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||  |||||||| | |||||| ||||||||||||||||| |||||    
T  10527643 tacttccaggttttccatcaatgagtggacttactagctcatcccaatcattgtaattgtcattccatagatcatccaacacaaacaaaaatctcttctc 10527544  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtatttctaacaactgattcaagg 315  Q
    |    || | || || || | ||||||||||||||||||||||| ||||||||| ||||||||  |||  |||| ||||||||||||||| ||||||| |    
T  10527543 ccttgagattttctttaactgaactcgaaggatatcaagattattgctttcccagacctttgaagcagaagatgatgtatttctaacaacagattcaatg 10527444  T
Q  316 agagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagct 415  Q
    ||||||||||||||||| | |||||| |||||||| |||||| |||||||||| |||| ||||||||| |||||||| ||| |||||||||||||||| |    
T  10527443 agagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaaccttttcatcattgtaaacaagtt 10527344  T
Q  416 gtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgccaacatctgataccaacatatt 512  Q
    |||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||| || ||||||   |||||||||||||||||    
T  10527343 gtgcaagggttgttttaccgacacctcccatacccaagattgcaacaacacctaaattattatttctactggtgccacagtctgataccaacatatt 10527247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 270
Target Start/End: Complemental strand, 11769619 - 11769365
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||  |||||| ||| ||||||||| |||||||||||||| |||||||| ||||||||| ||||||| |||||||||||||||     
T  11769619 aaagaccaacaatcttcatttgatagaagttttaattcatgtataggaaatgtgtgtgccacctcagcaacttttcgttggcgtgttgttataatcacca 11769520  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||||| |||||||||| | |||  ||||||||||| |||  ||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||    
T  11769519 tgcttccaggttttccattactgaagggacttactagttcaccccaatcattataattgtcattccacatatcatctaacacaaacaaaaatcttttctc 11769420  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa 270  Q
    |  |||||| || || || ||||||||||||||||||||||||| ||| ||||||    
T  11769419 cctcaagtttttctttaactcaactcgaaggatatcaagattattgctatcccaa 11769365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 16 - 270
Target Start/End: Original strand, 10433728 - 10433982
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||  |||||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||     
T  10433728 aaagaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttggcgcgttgttataatcacca 10433827  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      |||||||||||||||||| |||  ||||||||||| |||  ||||||||| ||||  |||||||||| ||| || |||||||||||||||||||||||    
T  10433828 tgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatcgtccaacacaaacaaaaatcttttctc 10433927  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa 270  Q
    |  | |||| || || || ||||| ||||||| ||||||||||| ||| ||||||    
T  10433928 cctcgagtttttctttaactcaacacgaaggacatcaagattattgctatcccaa 10433982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 16 - 512
Target Start/End: Complemental strand, 10500959 - 10500466
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||   || ||||||||||||||||||| ||| |||||||| |||||      
T  10500959 aaagtccaacaatcatcatcagatagaggttctaatttatgaataggaaatgtgcatgcgacctctgcaactttttgttcgcgtgttgttattatcactt 10500860  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      | ||| | || ||  | | | |  ||| ||| || ||||  ||| |||   |||   ||||||||||  || || |||||||||||||||||| | ||    
T  10500859 tgcctcctgtttctctgttagtcaagggagttattaactcatcccagtcaacataactgtcattccacatgtcgtccaacacaaacaaaaatcttctatc 10500760  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtatttctaacaactgattcaagg 315  Q
    |  ||| |  ||  | || |||||| |||||||||||||||||| ||||||    ||| ||||     | |||||||||||||||||||| |||||||||    
T  10500759 catcaaatgtttcattaactcaacttgaaggatatcaagattattgctttcg---accattgaattgacagatgttgtatttctaacaacagattcaagg 10500663  T
Q  316 agagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagct 415  Q
    ||||| ||||||| ||| | |||||| |||||||| | |||||||| ||| || || | ||||||||||| ||||| |||  | || ||||||||||| |    
T  10500662 agagatttggttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaattttatcgtcgttgtaaacaagtt 10500563  T
Q  416 gtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgccaacatctgataccaacatatt 512  Q
    | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  10500562 gagcaagtgttgttttaccgacgcctcccatacccaaaattgcaacaacacctaaattattatttctgcctgttccaatatctgataccaacatatt 10500466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 16 - 269
Target Start/End: Complemental strand, 9839246 - 9838993
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||  |||||| | ||||||| ||| || ||||||||||| |||||||| |||||||||||||||||||||||||||||||||     
T  9839246 aaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggcgcgttgttataatcacca 9839147  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      |||||||||||||||||| |||  ||||||||||| |||  ||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||    
T  9839146 tgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacacaaacaaaaatcttttctc 9839047  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttccca 269  Q
    |    |||| || || ||  |||||||||||| ||||||||||| ||| |||||    
T  9839046 ccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatccca 9838993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 269
Target Start/End: Complemental strand, 9850124 - 9849871
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||  |||||| | ||||||| ||| || ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||     
T  9850124 aaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggcgtgttgttataatcacca 9850025  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      |||||||||||||||||| |||  ||||||||||| |||  ||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||    
T  9850024 tgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacacaaacaaaaatcttttctc 9849925  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttccca 269  Q
    |    |||| || || ||  |||||||||||| ||||||||||| ||| |||||    
T  9849924 ccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatccca 9849871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 10663908 - 10663671
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaac 118  Q
    ||||||||||||||||  |||||| ||||||||| ||| |||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||   |    
T  10663908 gaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttcgcgcgttgttataatcaccatgc 10663809  T
Q  119 ttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctg 218  Q
    |||| |||||||||||| |||  |||||| |||| |||  ||||||||| ||||  |||||||||| |||||| ||||||||||||||||||||||||      
T  10663808 ttccaggttttccatcaatgaagggacttgctagttcactccaatcattataattgtcattccacagatcatcgaacacaaacaaaaatcttttctccct 10663709  T
Q  219 caagttctttttcaattcaactcgaaggatatcaagat 256  Q
    | || | || || || ||||||||||||| ||||||||    
T  10663708 cgagattttctttaactcaactcgaaggacatcaagat 10663671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 256
Target Start/End: Complemental strand, 10077650 - 10077414
Alignment:
Q  20 accaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaact 119  Q
    |||||||||||||||  |||| ||||||||||  ||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||   ||    
T  10077650 accaacaatcttcatttgataaaggttctaatatatgtataggaaatgtgcgtgccacctctgcaactttttgttggcgtgttgttataatcaccatgct 10077551  T
Q  120 tccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctgc 219  Q
    |||  | ||||||||| |||  |||||||| || |||  ||||||| | ||||  |||||||||| ||||||||||||||||||||||||||| |||  |    
T  10077550 tccatgctttccatcaatgaagggacttacaagttcatcccaatcactataattgtcattccacatatcatctaacacaaacaaaaatcttttatccctc 10077451  T
Q  220 aagttctttttcaattcaactcgaaggatatcaagat 256  Q
     |||| ||||| || ||||||||||||| ||||||||    
T  10077450 gagtttttttttaactcaactcgaaggacatcaagat 10077414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 10089175 - 10088975
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||| ||||||||||||||  || ||| ||||||||| ||| |||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||     
T  10089175 aaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggcgcgttgttataatcacca 10089076  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||||| |||||||||||| |||  |||||||||||  ||| ||||||||| ||||  |||||||||| |||||| |||||||||||||||||||||||    
T  10089075 tgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattataattgtcattccacagatcatccaacacaaacaaaaatcttttctc 10088976  T
Q  216 c 216  Q
    |    
T  10088975 c 10088975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 10196058 - 10195858
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||| ||||||||||||||  || ||| ||||||||| ||| |||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||     
T  10196058 aaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggcgcgttgttataatcacca 10195959  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||||| |||||||||||| |||  |||||||||||  ||| ||||||||| ||||  |||||||||| |||||| |||||||||||||||||||||||    
T  10195958 tgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattataattgtcattccacagatcatccaacacaaacaaaaatcttttctc 10195859  T
Q  216 c 216  Q
    |    
T  10195858 c 10195858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 10363482 - 10363733
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||| ||||||||||||||  |||||| | ||||||| ||| |||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||     
T  10363482 aaagtccaacaatcttcatttgatagaagatctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggcgcgttgttataatcacca 10363581  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||||| |||||||||||| |||  || |||||||| |||  ||||||||| ||||  |||||||||| ||| || |||||||||||| ||||||||||    
T  10363582 tgcttccaggttttccatcaatgaaggggcttactagttcaccccaatcattataattgtcattccacagatcgtccaacacaaacaaatatcttttctc 10363681  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcc 267  Q
    |  | || | || || || ||||||||||||| ||||||||||| |||||||    
T  10363682 cctcgagattttctttaactcaactcgaaggacatcaagattattgctttcc 10363733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 307 - 478
Target Start/End: Original strand, 10375799 - 10375970
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    |||||||||||||||||||||||||| | || ||||||||||||||| |||||| |||| || || |||||||||||||||| ||||||| |||||||||    
T  10375799 gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt 10375898  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||||||| ||||||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||||||||    
T  10375899 aaacaagttgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat 10375970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 10032388 - 10032148
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||  |||||| ||| || |||||| ||||||||||||   |||||||| ||||||||| ||||||| |||||||||||||||     
T  10032388 aaagaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgcatgccacctcagcaacttttcgttggcgtgttgttataatcacca 10032289  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||||| |||||||||||| |||  ||||||||||| |||  ||||||||| ||||  |||||||||| |||||| || ||||||||||||||||||||    
T  10032288 tgcttccaggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatcatccaaaacaaacaaaaatcttttctc 10032189  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagat 256  Q
    |  | || | || || || ||||||||||||| ||||||||    
T  10032188 cctcgagattttctttaactcaactcgaaggacatcaagat 10032148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 10184624 - 10184373
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaac 118  Q
    ||||||||||||||||  |||||| ||| || |||||| |||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||   |    
T  10184624 gaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgtgtgccacctcagctactttttcttggcgcgttgttataatcaccatgc 10184525  T
Q  119 ttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctg 218  Q
    |||| |||||||||||| |||  |||||||||||||||  ||||||||  |||   |||||||||| |||||| || |||||||||||||||||||||      
T  10184524 ttccaggttttccatcaatgaagggacttactagctcatcccaatcatcataactgtcattccacagatcatccaatacaaacaaaaatcttttctccct 10184425  T
Q  219 caagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa 270  Q
      | |  || || || ||||||||||||| ||||||||||| ||| ||||||    
T  10184424 tgaatgtttctttaactcaactcgaaggacatcaagattattgctatcccaa 10184373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 269
Target Start/End: Original strand, 10375529 - 10375782
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    ||||||||||| |||||||  |||||| ||| || |||||| ||||||||||||   || ||||  ||||||||| |||||||||||||||||||||||     
T  10375529 aaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtgcatgctaccttagcaacttttcgttggcgcgttgttataatcacca 10375628  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      |||||||||||||||||| |||  ||||||||||| |||  ||||||||  ||||  ||||||||||||||||| |||||||||||||||||||||||    
T  10375629 tgcttccgggttttccatcaatgaagggacttactagttcaccccaatcataataattgtcattccacaaatcatccaacacaaacaaaaatcttttctc 10375728  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttccca 269  Q
    |    | || || || ||  |||||||||||| ||||||||||| ||| |||||    
T  10375729 ccttgattttttctttaacgcaactcgaaggacatcaagattattgctatccca 10375782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 307 - 478
Target Start/End: Complemental strand, 10032118 - 10031947
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||| |||||| ||||||| || |||||||||||||||| ||||| |  ||||||||    
T  10032118 gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaagcccaggccttcaaatcaaaatgttgttgaacttctttatcattgt 10032019  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||||||| || |||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||||||||    
T  10032018 aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat 10031947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 307 - 478
Target Start/End: Complemental strand, 10127043 - 10126872
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||| |  ||||||||    
T  10127043 gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgt 10126944  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||||||| || |||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||||||||    
T  10126943 aaacaagttgggcaagggtagtttttcccaaacctcccatgcccaaaattgcaacaacacctatattattat 10126872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 16 - 259
Target Start/End: Complemental strand, 10261083 - 10260840
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    ||||||||||| |||||||  |||||| ||| || |||||| ||||||||||||   |||||||| |||||||||||||| ||||||||||||||||||     
T  10261083 aaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtgcatgccacctcagcaactttttgttgccgcgttgttataatcacca 10260984  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||||| ||||||||||||  ||  || |||||||| |||  ||||||||| ||||  |||||||||| ||| || |||||||||||||||||||||||    
T  10260983 tgcttccaggttttccatcaacgaaggggcttactagttcaccccaatcattataattgtcattccacagatcgtccaacacaaacaaaaatcttttctc 10260884  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattat 259  Q
    |  | || | || || || |||||||||||||| ||||||||||    
T  10260883 cctcgagattttctttaactcaactcgaaggatgtcaagattat 10260840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 10580986 - 10580735
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||  |||||||||||||| | ||| | || |||  |||| |||| || || |||||||||||||||||||||||||||||||     
T  10580986 aaagaccaacaatcttcatttgatagaggttctaaattatgtacagcaaacatgtgtgccatctttgtaactttttgttggcgcgttgttataatcacca 10580887  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||||| |||||||||| | |||  |||||||||||||||  |||||||||  |||  |||||||||| |||||| |||||||||||||||||||||||    
T  10580886 tgcttccaggttttccattaatgaagggacttactagctcatcccaatcattacaattgtcattccacagatcatccaacacaaacaaaaatcttttctc 10580787  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcc 267  Q
    |    || | || || || ||||| ||||||| ||||||||||| |||||||    
T  10580786 ccttgagattttctttaactcaacacgaaggacatcaagattattgctttcc 10580735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 307 - 478
Target Start/End: Complemental strand, 10663641 - 10663470
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||| |  ||||||||    
T  10663641 gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgt 10663542  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||||||| || |||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||||||||    
T  10663541 aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat 10663470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 270
Target Start/End: Complemental strand, 10127313 - 10127059
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||||||||||||||  |||||   || || |||||| |||||||||||| | |||||||| |||||||||||||||||||||||||||||||||     
T  10127313 aaagaccaacaatcttcatctgatagtacttttagttcatgtataggaaatgtgcgtgccacctcagcaactttttgttggcgcgttgttataatcacca 10127214  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||||| |||||||||| | |||  |||||||||||||||  |||||||||  |||  |||||||| | ||| || |||||||||||||||||||| ||    
T  10127213 tgcttccaggttttccattaatgaagggacttactagctcatcccaatcattacaattgtcattccatagatcgtccaacacaaacaaaaatcttttttc 10127114  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaa 270  Q
    |  | || | || || ||  |||||||||||| ||||||||||| ||| ||||||    
T  10127113 cctcgagattttctttaacgcaactcgaaggacatcaagattattgctatcccaa 10127059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 307 - 476
Target Start/End: Original strand, 10363752 - 10363921
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||| |  ||||||||    
T  10363752 gattcaaggagagactttgttactctcataatatcaaaatcctcagagacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcattgt 10363851  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattatt 476  Q
    ||||||| || |||||||| ||||| || |  |||||||| || | ||||||||||||||||| ||||||    
T  10363852 aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattatt 10363921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 304 - 476
Target Start/End: Complemental strand, 10260816 - 10260644
Alignment:
Q  304 actgattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcat 403  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||| || || |  ||||||||||||| ||||| |  |||||    
T  10260816 actgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacgccttcatgtcaaaatgttgttgaacttctttatcat 10260717  T
Q  404 tgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattatt 476  Q
    |||||||||| || |||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||||||    
T  10260716 tgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattatt 10260644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 339 - 479
Target Start/End: Original strand, 11160003 - 11160143
Alignment:
Q  339 atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacg 438  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| | || ||||||| ||| |||||||||||| |||||||| ||||||||||||||     
T  11160003 atcaaaatcctcagatacacaagcccatgctttgaaatcaaaatgatcttgaactttttcattattgtaaacaagttgtgcaagtgtcgttttaccgaca 11160102  T
Q  439 cctcccatacccacaattgcaacaacacctaaattattatt 479  Q
    ||||||||||| | |||||||||||| |||| ||| |||||    
T  11160103 cctcccatacctaaaattgcaacaacgcctatattgttatt 11160143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 307 - 478
Target Start/End: Complemental strand, 10580716 - 10580545
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || |  ||||||||||||| ||||| |  ||||||||    
T  10580716 gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccacgccttcatgtcaaaatgttgttgaacttctttatcattgt 10580617  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||||||| || |||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||||||||    
T  10580616 aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat 10580545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 307 - 476
Target Start/End: Complemental strand, 10088905 - 10088736
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || ||||||||||| |||| ||||| |  ||||||||    
T  10088905 gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcattgt 10088806  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattatt 476  Q
    ||||||| || |||||||| ||||| || |  |||||||| || | ||||||||||||||||| ||||||    
T  10088805 aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattatt 10088736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 307 - 476
Target Start/End: Complemental strand, 10195788 - 10195619
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || || ||||||||||| |||| ||||| |  ||||||||    
T  10195788 gattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcattgt 10195689  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattatt 476  Q
    ||||||| || |||||||| ||||| || |  |||||||| || | ||||||||||||||||| ||||||    
T  10195688 aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattatt 10195619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 467
Target Start/End: Complemental strand, 10889389 - 10889261
Alignment:
Q  339 atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacg 438  Q
    |||||||||||||||||||||| |||| ||||||| |||||| || | || ||||||| |||||||||||||||| |||||||| ||||||||||||||     
T  10889389 atcaaaatcctcagatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgaca 10889290  T
Q  439 cctcccatacccacaattgcaacaacacc 467  Q
    ||||||||||| | |||||||||||||||    
T  10889289 cctcccatacctaaaattgcaacaacacc 10889261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 307 - 478
Target Start/End: Complemental strand, 9838976 - 9838805
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    |||||||||||||||||||||||||| | || ||||||||||||||| |||||| |||| ||  | | |||||||||||||| ||||| | |||||||||    
T  9838976 gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgt 9838877  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||||||| || |||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||| ||||    
T  9838876 aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat 9838805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 307 - 478
Target Start/End: Complemental strand, 9849854 - 9849683
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    |||||||||||||||||||||||||| | || ||||||||||||||| |||||| |||| ||  | | |||||||||||||| ||||| | |||||||||    
T  9849854 gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcatatcaaaatgttgttgaacttcttcatcattgt 9849755  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||||||| || |||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||| ||||    
T  9849754 aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat 9849683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 339 - 467
Target Start/End: Complemental strand, 8861369 - 8861241
Alignment:
Q  339 atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacg 438  Q
    |||||||||||| ||||||||| |||| ||||||| |||||| || | || ||||||| |||||||||||||||| |||||||| ||||||||||||||     
T  8861369 atcaaaatcctctgatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgaca 8861270  T
Q  439 cctcccatacccacaattgcaacaacacc 467  Q
    ||||||||||| | |||||||||||||||    
T  8861269 cctcccatacctaaaattgcaacaacacc 8861241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 307 - 467
Target Start/End: Original strand, 11130980 - 11131140
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    |||||||||||||  || |||||||| | || |||||||||||| ||||||||| |||| ||||||| |||||| |||| || ||||||| |||||||||    
T  11130980 gattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcattgt 11131079  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacc 467  Q
    || |||  ||||||||||| ||||| ||||| ||||||||||| | |||||||||||||||    
T  11131080 aagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacacc 11131140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 307 - 467
Target Start/End: Original strand, 11148808 - 11148968
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    |||||||||||||  || |||||||| | || |||||||||||| ||||||||| |||| ||||||| |||||| |||| || ||||||| |||||||||    
T  11148808 gattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcattgt 11148907  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacc 467  Q
    || |||  ||||||||||| ||||| ||||| ||||||||||| | |||||||||||||||    
T  11148908 aagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacacc 11148968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 307 - 478
Target Start/End: Complemental strand, 11769349 - 11769178
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||||| || ||| |||| || || |||||||||| ||||| ||||| |  ||||||||    
T  11769349 gattcaaggagagacctggttactctcataatatcaaaatcctcagacacgcaagcccatgccttcaaatcaaaatattgttgaacttctttatcattgt 11769250  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    | ||||| || |||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||||||||    
T  11769249 agacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat 11769178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 307 - 469
Target Start/End: Complemental strand, 10184357 - 10184195
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    |||||||||||||||||||||||||| |||| |||||||||||| || |||||| |||| ||  | | |||||||||||||| ||||| |  ||||||||    
T  10184357 gattcaaggagagacttggttactctcataatatcaaaatcctcggacacacaagcccacgccctcatatcaaaatgttgttgaacttctttatcattgt 10184258  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacaccta 469  Q
    ||||||| || |||||||| ||||| || |  |||||||| |||| |||||||||||||||||    
T  10184257 aaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta 10184195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 13333286 - 13333046
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaac 118  Q
    |||||||| || ||||  |||||||| |||| ||  ||||||||||| ||||| || ||||| ||||||||||||||||| ||||| || ||||||  ||    
T  13333286 gaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccctac 13333187  T
Q  119 ttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctg 218  Q
    ||||   ||| || | | | |||||| |||||| ||||  ||||||||| ||||  ||||||||||  ||||| ||||| |||||||||||||| |||      
T  13333186 ttccttttttgccgttaatcagtggagttactaactcatcccaatcattataattgtcattccacaggtcatccaacactaacaaaaatcttttatccct 13333087  T
Q  219 caagttctttttcaattcaactcgaaggatatcaagattat 259  Q
    |||||| || ||||||||||||||||| | |||||||||||    
T  13333086 caagtttttattcaattcaactcgaagaaaatcaagattat 13333046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 307 - 478
Target Start/End: Complemental strand, 10077384 - 10077213
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||| || |  ||||||||||| | |  ||||||   ||||||||    
T  10077384 gattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccatgcctgcaaatcaaaatggtatcgaactttataatcattgt 10077285  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||||||| || |||||||| ||||| || |  |||||||| |||| |||||||||||||||||  |||||||    
T  10077284 aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatcttattat 10077213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 307 - 478
Target Start/End: Original strand, 10433998 - 10434169
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    |||||||||||||||||||||||| | | || ||||||||||| ||| |||||| ||||||| || ||||||||||| |||| ||||| |  ||||||||    
T  10433998 gattcaaggagagacttggttactttcaaaatatcaaaatcctgagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgt 10434097  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||||||| || |||||||| ||||| || |  |||||||| || | |||||||||||||||||  |||||||    
T  10434098 aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattat 10434169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 13171413 - 13171173
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaac 118  Q
    |||||||| || ||||  |||||||| |||| ||  ||||||||||| ||||| || ||||| ||||||||||||||||| ||||| || ||||||  ||    
T  13171413 gaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccatac 13171314  T
Q  119 ttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctg 218  Q
    |||| | ||| || | | | | |||| |||||| ||||  ||||||||| |||  ||||||||||| ||| || | ||| |||||||||||||| |||      
T  13171313 ttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcactaacaaaaatcttttatccct 13171214  T
Q  219 caagttctttttcaattcaactcgaaggatatcaagattat 259  Q
    |||||| |  ||||||||||||||||| | |||||||||||    
T  13171213 caagttttgattcaattcaactcgaagaaaatcaagattat 13171173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 13344471 - 13344231
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaac 118  Q
    |||||||| || ||||  |||||||| |||| ||  ||||||||||| ||||| || ||||| ||||||||||||||||| ||||| || ||||||  ||    
T  13344471 gaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccatac 13344372  T
Q  119 ttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctg 218  Q
    |||| | ||| || | | | | |||| |||||| ||||  ||||||||| |||  ||||||||||| ||| || | ||| |||||||||||||| |||      
T  13344371 ttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcactaacaaaaatcttttatccct 13344272  T
Q  219 caagttctttttcaattcaactcgaaggatatcaagattat 259  Q
    |||||| |  ||||||||||||||||| | |||||||||||    
T  13344271 caagttttgattcaattcaactcgaagaaaatcaagattat 13344231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 266
Target Start/End: Complemental strand, 13161362 - 13161115
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaac 118  Q
    |||||||| || ||||  |||||||| |||| ||  ||||||||||| ||||| || ||||| ||||||||||||||||| ||||| || ||||||  ||    
T  13161362 gaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccctac 13161263  T
Q  119 ttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctg 218  Q
    |||| | ||| || | | | | |||| |||||| ||||  ||||||||| |||  ||||||||||| ||| || | ||| |||||||||||||| |||      
T  13161262 ttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcactaacaaaaatcttttatccct 13161163  T
Q  219 caagttctttttcaattcaactcgaaggatatcaagattatcgctttc 266  Q
    |||||| || ||||| |||||||||||   ||||||||||| ||||||    
T  13161162 caagtttttattcaactcaactcgaagagaatcaagattattgctttc 13161115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 19 - 266
Target Start/End: Complemental strand, 13290047 - 13289800
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaac 118  Q
    |||||||| || ||||  |||||||| |||| ||  ||||||||||| ||||| || ||||| ||||||||||||||||| ||||| || ||||||  ||    
T  13290047 gaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccctac 13289948  T
Q  119 ttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctg 218  Q
    |||| | ||| || | | | | |||| |||||| ||||  ||||||||| |||  ||||||||||| ||| || | ||| |||||||||||||| |||      
T  13289947 ttcctgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcaccaacaaaaatcttttatccct 13289848  T
Q  219 caagttctttttcaattcaactcgaaggatatcaagattatcgctttc 266  Q
    |||||| |  |||| ||||||||||||   ||||||||||| ||||||    
T  13289847 caagttttgattcagttcaactcgaagagaatcaagattattgctttc 13289800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 270
Target Start/End: Original strand, 11130721 - 11130964
Alignment:
Q  27 atcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaacttccgggt 126  Q
    |||||||| ||||| |  |||||||| ||||||||||||||| || || ||||||||||||||||||||||| ||||| |  || |||   |||||        
T  11130721 atcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgttggcgtgttgtgacgatgaccctgcttccattg 11130820  T
Q  127 tttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc-ctgcaagttc 225  Q
    ||||||| | | |  ||| |||| || |||  ||||||||| ||||  |||||||| |  ||||| |||||||||||||||||||| || ||  |||||     
T  11130821 tttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccataggtcatccaacacaaacaaaaatcttttgtctctcaaagtt- 11130919  T
Q  226 tttttcaattcaactcgaaggatatcaagattatcgctttcccaa 270  Q
    || |||| |||||||||||| | ||||||||||| | ||||||||    
T  11130920 ttcttcagttcaactcgaagaaaatcaagattattgttttcccaa 11130964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 8861660 - 8861583
Alignment:
Q  27 atcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgt 104  Q
    |||||||| ||||| |  |||||||| ||||||||||||||| || || ||||||||||||||||||||||| |||||    
T  8861660 atcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgttggcgtgttgt 8861583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 11148549 - 11148626
Alignment:
Q  27 atcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgt 104  Q
    |||||||| ||||| |  |||||||| ||||||||||||||| || || ||||||||||||||||||||||| |||||    
T  11148549 atcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgttggcgtgttgt 11148626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 11159712 - 11159789
Alignment:
Q  27 atcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgt 104  Q
    |||||||| ||||| |  |||||||| ||||||||||||||| || || ||||||||||||||||||||||| |||||    
T  11159712 atcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgttggcgtgttgt 11159789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 467
Target Start/End: Complemental strand, 13161077 - 13160935
Alignment:
Q  325 gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg 424  Q
    |||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| |  |||||| |||| ||| || ||||| |    
T  13161077 gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag 13160978  T
Q  425 tcgttttaccgacgcctcccatacccacaattgcaacaacacc 467  Q
    | ||||| || || || |||||||||| ||||||||| |||||    
T  13160977 tggttttgccaacaccgcccatacccaaaattgcaaccacacc 13160935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 467
Target Start/End: Complemental strand, 13171128 - 13170986
Alignment:
Q  325 gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg 424  Q
    |||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| |  |||||| |||| ||| || ||||| |    
T  13171128 gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag 13171029  T
Q  425 tcgttttaccgacgcctcccatacccacaattgcaacaacacc 467  Q
    | ||||| || || || |||||||||| ||||||||| |||||    
T  13171028 tggttttgccaacaccgcccatacccaaaattgcaaccacacc 13170986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 467
Target Start/End: Complemental strand, 13333001 - 13332859
Alignment:
Q  325 gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg 424  Q
    |||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| |  |||||| |||| ||| || ||||| |    
T  13333001 gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag 13332902  T
Q  425 tcgttttaccgacgcctcccatacccacaattgcaacaacacc 467  Q
    | ||||| || || || |||||||||| ||||||||| |||||    
T  13332901 tggttttgccaacaccgcccatacccaaaattgcaaccacacc 13332859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 467
Target Start/End: Complemental strand, 13344168 - 13344044
Alignment:
Q  343 aaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacgcctc 442  Q
    |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| |  |||||| |||| ||| || ||||| || ||||| || || || |    
T  13344168 aaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgccaacaccgc 13344069  T
Q  443 ccatacccacaattgcaacaacacc 467  Q
    ||||||||| ||||||||| |||||    
T  13344068 ccatacccaaaattgcaaccacacc 13344044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 467
Target Start/End: Complemental strand, 13289762 - 13289620
Alignment:
Q  325 gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg 424  Q
    |||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| |  |||||| |||| ||| || ||||| |    
T  13289762 gttactctcaaaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag 13289663  T
Q  425 tcgttttaccgacgcctcccatacccacaattgcaacaacacc 467  Q
    | ||||| || || || |||||||||| |||||| || |||||    
T  13289662 tggttttgccaacaccgcccatacccaaaattgcgaccacacc 13289620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 11148681 - 11148792
Alignment:
Q  159 ccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc-ctgcaagttctttttcaattcaactcgaaggatatcaagatt 257  Q
    ||||||||| ||||  |||||||| || ||||| ||||||||||||||||||||  | ||  ||||| || |||| |||||||||||| | |||||||||    
T  11148681 ccaatcattataattgtcattccataagtcatccaacacaaacaaaaatcttttggctctcaaagtt-ttcttcagttcaactcgaagaaaatcaagatt 11148779  T
Q  258 atcgctttcccaa 270  Q
    || | ||||||||    
T  11148780 attgttttcccaa 11148792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 10889680 - 10889603
Alignment:
Q  27 atcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgt 104  Q
    |||||||| ||||| |  ||||||||  ||||||||| | ||||| || ||||||||||||||||| ||||| |||||    
T  10889680 atcttcattagataaaacttctaatttgtgaataggatacgtgtgtgcaacctctgcaactttttgctggcgtgttgt 10889603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 510
Target Start/End: Original strand, 17852606 - 17853101
Alignment:
Q  15 caaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcacc 114  Q
    ||||||||||||||||||||  |||| ||||||||||| |||||| ||||||||| | || ||||| |||||||||| | |||| |||||||| || |||    
T  17852606 caaagaccaacaatcttcatcggatataggttctaatttatgaattggaaatgtgcgtgcaacctccgcaactttttttaggcgtgttgttatgatgacc 17852705  T
Q  115 gaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttct 214  Q
       ||||| | |||||| | |   |  ||| |||||||||||  |||||||  |||||  |||||||| || || || |||||||||||||||||| | |    
T  17852706 ttgcttccagcttttcccttaaacaagggagttactagctcactccaatcaacgtaattgtcattccataagtcgtccaacacaaacaaaaatcttctat 17852805  T
Q  215 cctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtatttctaacaactgattcaag 314  Q
    ||  ||| |  ||  | ||||||||||| |||||||||||||||||||||||||| ||||||||  ||||  ||||||||||||||||||| ||||||||    
T  17852806 ccatcaattgtttcattaattcaactcggaggatatcaagattatcgctttcccagacctttgaagcagcaaatgttgtatttctaacaacagattcaag 17852905  T
Q  315 gagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagc 414  Q
    |||||||||||||||||| | |||||||||||| || |||||||||||||||||||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  17852906 gagagacttggttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaaccttttcatcattgtaaacaagc 17853005  T
Q  415 tgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgccaacatctgataccaacata 510  Q
    ||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||||| |||||| |||| ||||| |  |||||||||| ||||    
T  17853006 tgtgcaagggtcgttttaccgacacctcccatccccaatattgcaacaacacctaaattgttatttatgctggtgcctatgtctgataccagcata 17853101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 2e-78; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 16 - 508
Target Start/End: Complemental strand, 11485423 - 11484931
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |   || |||||||||||||| | || ||| |||||||| ||||||     
T  11485423 aaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcgacctctgcaactttctcttcgcgtgttgttatgatcacct 11485324  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||| | | || ||||| | | |  ||| ||| || |  |  |||||||   ||||  || ||||| |  || || ||||||||||||| |||| | ||    
T  11485323 tgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatc 11485224  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtatttctaacaactgattcaagg 315  Q
    || ||| | |||  | ||||||||| |||||||||||||||||| ||||||||| || |||||     | || ||||| ||||||||||| |||||||||    
T  11485223 cttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttcccagacttttgaattgacagacgttgtgtttctaacaacagattcaagg 11485124  T
Q  316 agagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagct 415  Q
    || ||||||||||  || |  ||||| |||||||| |||||||||||||| ||||||| ||||||||| |||||||||||| |||| ||||||||||| |    
T  11485123 agggacttggttatcctcacgacatcgaaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactttttcatcgttgtaaacaagtt 11485024  T
Q  416 gtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgccaacatctgataccaaca 508  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| || |||   |||||||||||||    
T  11485023 gtgcaagggtcgttttaccgacgcctcccataaccaaaattgcaacaacacctaaattattatatctgctggtaccacagtctgataccaaca 11484931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 232 - 490
Target Start/End: Original strand, 44957588 - 44957846
Alignment:
Q  232 aattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtatttctaacaactgattcaaggagagacttggttactc 331  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||  |  |  ||||||| |||||||||||  ||||||| |||||||| |||| ||    
T  44957588 aattcaacttgaaggatatcaagattatcgctttcccacacatttgaatcgacatatgttgtttttctaacaacacattcaagaagagactttgttattc 44957687  T
Q  332 taataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgtttt 431  Q
    ||| |||||  |||||||| |||||||| | ||| ||||||| ||| ||||||||||||||||||  ||||||||||||||| ||||| || ||||||||    
T  44957688 taacaacattgaaatcctctgatacacatatccatgctttgagatcgaaatgttgttcaacttttatatcattgtaaacaagttgtgcgagagtcgtttt 44957787  T
Q  432 accgacgcctcccatacccacaattgcaacaacacctaaattattatttctgcttgtgc 490  Q
    |||||| ||||||||||| |   | ||||||||||||||||||||||||||||| ||||    
T  44957788 accgacacctcccatacctaaggtggcaacaacacctaaattattatttctgctggtgc 44957846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 44957372 - 44957463
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttat 107  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| || ||||||||||| |||||||  || ||||||||    
T  44957372 aaagaccaacaatcttcatcagatagaggttctaatttatgaatcggaaatgtgtgtgcaacctctgcaacgttttgttcacgtgttgttat 44957463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 16 - 259
Target Start/End: Complemental strand, 26907282 - 26907039
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    ||||||||||||||||||   |||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||     
T  26907282 aaagaccaacaatcttcagttgatagaggttctaatttatgtataggaaatgtatgtgccacctctgcaactttttgttggcgcgttgttataatcacca 26907183  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
      ||||| |||||||||| | |||  |||||||| || ||   ||||||| | ||||  || |||||||  ||||| |||||||||||||||||||||||    
T  26907182 tgcttccaggttttccatgaatgaagggacttacaagttcttcccaatcactataattgtcgttccacaggtcatccaacacaaacaaaaatcttttctc 26907083  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattat 259  Q
    |    |||| ||  | || ||||||||||||| |||||||||||    
T  26907082 ccttgagtttttccttaactcaactcgaaggacatcaagattat 26907039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 307 - 478
Target Start/End: Complemental strand, 26907012 - 26906841
Alignment:
Q  307 gattcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt 406  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||||| ||||||||||| || || |||||||||||  ||| ||||| |  ||||||||    
T  26907012 gattcaaggagagatttggttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgccgttgaacttctttatcattgt 26906913  T
Q  407 aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattat 478  Q
    ||| ||| || |||||||| ||||| || |  |||||||| |||| ||||||||||||||||| ||||||||    
T  26906912 aaagaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat 26906841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 6e-26; HSPs: 5)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 135575 - 135815
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaac 118  Q
    |||||||| || ||||  |||||||| |||| ||  ||||||||||| ||||| || ||||| ||||||||||||||||| ||||| || ||||||  ||    
T  135575 gaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccatac 135674  T
Q  119 ttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctg 218  Q
    |||| | ||| || | | | | |||| |||||| ||||  ||||||||| |||  ||||||||||| ||| || | ||| |||||||||||||| |||      
T  135675 ttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcactaacaaaaatcttttatccct 135774  T
Q  219 caagttctttttcaattcaactcgaaggatatcaagattat 259  Q
    |||||| |  ||||||||||||||||| | |||||||||||    
T  135775 caagttttgattcaattcaactcgaagaaaatcaagattat 135815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 145626 - 145866
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccgaac 118  Q
    |||||||| || ||||  |||||||| |||| ||  ||||||||||| ||||| || ||||| ||||||||||||||||| ||||| || ||||||  ||    
T  145626 gaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccatac 145725  T
Q  119 ttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctcctg 218  Q
    |||| | ||| || | | | | |||| |||||| ||||  ||||||||| |||  ||||||||||| ||| || | ||| |||||||||||||| |||      
T  145726 ttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcactaacaaaaatcttttatccct 145825  T
Q  219 caagttctttttcaattcaactcgaaggatatcaagattat 259  Q
    |||||| |  ||||||||||||||||| | |||||||||||    
T  145826 caagttttgattcaattcaactcgaagaaaatcaagattat 145866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 467
Target Start/End: Original strand, 135860 - 136002
Alignment:
Q  325 gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg 424  Q
    |||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| |  |||||| |||| ||| || ||||| |    
T  135860 gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag 135959  T
Q  425 tcgttttaccgacgcctcccatacccacaattgcaacaacacc 467  Q
    | ||||| || || || |||||||||| ||||||||| |||||    
T  135960 tggttttgccaacaccgcccatacccaaaattgcaaccacacc 136002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 467
Target Start/End: Original strand, 145911 - 146053
Alignment:
Q  325 gttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaaggg 424  Q
    |||||||| | || ||| |||||||| ||||||||||||||| |||| | ||||||||| | || ||||| |  |||||| |||| ||| || ||||| |    
T  145911 gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag 146010  T
Q  425 tcgttttaccgacgcctcccatacccacaattgcaacaacacc 467  Q
    | ||||| || || || |||||||||| ||||||||| |||||    
T  146011 tggttttgccaacaccgcccatacccaaaattgcaaccacacc 146053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 153931 - 154026
Alignment:
Q  19 gaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcacc 114  Q
    |||||||| || ||||  |||||||| |||| ||  ||||||||||| ||||| || ||||| ||||||||||||||||| ||||| || ||||||    
T  153931 gaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcacc 154026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 31679417 - 31679668
Alignment:
Q  16 aaagaccaacaatcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataatcaccg 115  Q
    |||||||| ||||| ||||  |||||||||||||||| ||  |||||||| || || |  | ||| |||||||||| ||| || ||||| |||||||||     
T  31679417 aaagaccagcaatcatcatctgatagaggttctaatttatagataggaaaggtatgggtgaactcggcaactttttattgacgtgttgtgataatcaccc 31679516  T
Q  116 aacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctc 215  Q
     |||||| | || ||||||| |||  ||| | ||||| | | |||||||||| ||   |||||||||||  ||||| ||||||||||||||||||||  |    
T  31679517 tacttccagattctccatcaatgaagggagtgactagatgatgccaatcattatagctatcattccacatgtcatccaacacaaacaaaaatctttttcc 31679616  T
Q  216 ctgcaagttctttttcaattcaactcgaaggatatcaagattatcgctttcc 267  Q
    || |||||| |  || ||||  |||||||| | |||||||||||| ||||||    
T  31679617 cttcaagttttgctttaatttgactcgaagaaaatcaagattatcactttcc 31679668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 479
Target Start/End: Complemental strand, 29836756 - 29836586
Alignment:
Q  309 ttcaaggagagacttggttactctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaa 408  Q
    |||||||||||| ||||||||||| |  | ||||||||| ||||| |||||||||||| |||  | ||||||||| | || ||||| | | |  |||||     
T  29836756 ttcaaggagagatttggttactctcaacatatcaaaatcttcagacacacaaacccagacttgtacatcaaaatgatttttaacttcttcctggttgtat 29836657  T
Q  409 acaagctgtgcaagggtcgttttaccgacgcctcccatacccacaattgcaacaacacctaaattattatt 479  Q
    | |||  | || ||||||||||||||||  |||||||| ||   |||||| || ||||||| |||||||||    
T  29836656 ataagtcgagcgagggtcgttttaccgatacctcccatgcctgtaattgcgactacacctatattattatt 29836586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 443
Target Start/End: Complemental strand, 825991 - 825887
Alignment:
Q  339 atcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaagctgtgcaagggtcgttttaccgacg 438  Q
    |||||||||||| |  |||||||||||| |||| ||||||||||| |  ||||||||   |||||||||||||||  | ||||| |||| |||||| ||     
T  825991 atcaaaatcctcggtgacacaaacccagactttcaaatcaaaatgctcatcaactttcttatcattgtaaacaagtcgagcaagtgtcgatttaccaaca 825892  T
Q  439 cctcc 443  Q
    |||||    
T  825891 cctcc 825887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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