View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20501_low_14 (Length: 314)
Name: NF20501_low_14
Description: NF20501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20501_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 33 - 165
Target Start/End: Complemental strand, 52874464 - 52874332
Alignment:
| Q |
33 |
aaccacaaacatccaacagagaaatctatagttggacgagttggagcatatagtagaacttccactgaaatgggcaatttaaaatcaaccaattgtaaat |
132 |
Q |
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| T |
52874464 |
aaccacaaacatccaacagagaaatctatagttggacgagttggagcatatagtagaacttccactgaaatgggcaattcaaaatcaaccaattgtaaat |
52874365 |
T |
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| Q |
133 |
ctcgtgcaaaaaggaatctaatagaaatatatg |
165 |
Q |
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| T |
52874364 |
ctcgtgcaaaaaggaatctaatagaaatatatg |
52874332 |
T |
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