View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20502_high_12 (Length: 248)
Name: NF20502_high_12
Description: NF20502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20502_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 4515385 - 4515619
Alignment:
| Q |
1 |
ttgcttggactattgaaaaaggtagaatagaaagtagatacaatctgcaccatatatttatggtatgaaaattttgcannnnnnnatgaatcttttagtt |
100 |
Q |
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| T |
4515385 |
ttgcttggactattgaaaaaggtagaatagaaagtagatacaatctgcaccatatatttatggtatgaaaattttgcatttttttatgaatcttttagtt |
4515484 |
T |
|
| Q |
101 |
catatgttttctgtttgttacttttctagatacaaaagcgtcgaccagagttgcgtttgattattgcatctgctactattgaagcaaaatcaatggctga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
4515485 |
catatgttttctgtttgttacttttctagatacaaaagcgtcgaccagagttgcgtttgattattgcatctgctactattgaagcaaaatcgatggctga |
4515584 |
T |
|
| Q |
201 |
cttcttccgcccaaggttttcgtccaatcttgctt |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
4515585 |
cttcttccgcccaaggttttcgtccaatcttgctt |
4515619 |
T |
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