View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20502_low_16 (Length: 227)
Name: NF20502_low_16
Description: NF20502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20502_low_16 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 4514915 - 4515135
Alignment:
| Q |
7 |
ggtttttcccaataaaagcataaagttattgcataaagtgaaaatcaattatggaggtaaaatcaaataatggcttaaagttggcatctaaacatgtcga |
106 |
Q |
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| T |
4514915 |
ggtttttcccaataaaagcatcaaattattgcataaagtgaaaatcaattatggaggtaaaatcaaataatggcttaaagttggcatctaaacatgtcga |
4515014 |
T |
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| Q |
107 |
gcaattctacatctctagaatcaattttgttttctcaaaatgtggaaataaacttacacttatatggtgatgatgattgatctatcacacacacattaac |
206 |
Q |
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| T |
4515015 |
gcaattctacatctctagaatcaattttgttttctcaaaatgtggaaataaacttacacttatatggtgatgatgattgatctatcacacacacattaac |
4515114 |
T |
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| Q |
207 |
ttctttttggtttttggcagt |
227 |
Q |
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||||||||||||||||||||| |
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| T |
4515115 |
ttctttttggtttttggcagt |
4515135 |
T |
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