View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20505_low_1 (Length: 915)

Name: NF20505_low_1
Description: NF20505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20505_low_1
NF20505_low_1
[»] chr6 (14 HSPs)
chr6 (208-766)||(16863996-16864551)
chr6 (18-213)||(16863807-16864002)
chr6 (557-769)||(6977023-6977235)
chr6 (566-767)||(16859334-16859535)
chr6 (557-765)||(6977986-6978195)
chr6 (558-767)||(20409065-20409274)
chr6 (208-484)||(12181917-12182196)
chr6 (603-766)||(20410113-20410276)
chr6 (619-686)||(12181674-12181741)
chr6 (18-88)||(12182190-12182260)
chr6 (85-125)||(6977867-6977907)
chr6 (86-121)||(16863511-16863546)
chr6 (619-680)||(12182707-12182768)
chr6 (92-125)||(6977316-6977349)
[»] chr2 (13 HSPs)
chr2 (208-494)||(1389510-1389796)
chr2 (563-765)||(1389233-1389434)
chr2 (563-766)||(1394710-1394913)
chr2 (558-767)||(45413328-45413537)
chr2 (558-766)||(45412334-45412543)
chr2 (208-378)||(28851168-28851338)
chr2 (586-765)||(28851552-28851730)
chr2 (558-762)||(28847336-28847540)
chr2 (18-88)||(1389790-1389860)
chr2 (18-88)||(28851104-28851174)
chr2 (626-686)||(10851991-10852051)
chr2 (86-125)||(28847608-28847647)
chr2 (406-484)||(28851343-28851421)
[»] chr3 (14 HSPs)
chr3 (208-504)||(48057892-48058188)
chr3 (558-768)||(54539349-54539559)
chr3 (558-762)||(48053129-48053332)
chr3 (558-692)||(48059020-48059154)
chr3 (557-768)||(54539106-54539303)
chr3 (18-88)||(48057828-48057898)
chr3 (619-686)||(32831002-32831069)
chr3 (86-125)||(48053440-48053479)
chr3 (603-686)||(51220499-51220582)
chr3 (628-686)||(32829819-32829877)
chr3 (729-765)||(48060802-48060838)
chr3 (603-686)||(26723799-26723882)
chr3 (709-767)||(11413441-11413499)
chr3 (603-668)||(51219546-51219611)
[»] chr7 (4 HSPs)
chr7 (558-767)||(12961982-12962191)
chr7 (127-213)||(40471265-40471351)
chr7 (619-686)||(35080362-35080429)
chr7 (628-686)||(35081522-35081580)
[»] chr5 (17 HSPs)
chr5 (302-494)||(8067032-8067230)
chr5 (563-766)||(8061855-8062058)
chr5 (563-767)||(8067306-8067510)
chr5 (558-765)||(17415541-17415747)
chr5 (558-765)||(14189664-14189871)
chr5 (558-767)||(14190339-14190547)
chr5 (558-767)||(24242015-24242226)
chr5 (289-404)||(14190040-14190161)
chr5 (603-765)||(17414544-17414706)
chr5 (18-88)||(8066913-8066983)
chr5 (208-267)||(8066977-8067036)
chr5 (603-686)||(5504032-5504115)
chr5 (629-692)||(25369281-25369344)
chr5 (603-686)||(121428-121511)
chr5 (603-686)||(124426-124509)
chr5 (603-686)||(5502996-5503079)
chr5 (603-653)||(42196137-42196187)
[»] chr8 (7 HSPs)
chr8 (557-766)||(23039123-23039332)
chr8 (558-767)||(23039378-23039587)
chr8 (558-767)||(38613268-38613477)
chr8 (558-767)||(38612217-38612426)
chr8 (603-686)||(13883766-13883849)
chr8 (603-686)||(13882734-13882817)
chr8 (86-125)||(38613154-38613193)
[»] chr4 (18 HSPs)
chr4 (557-765)||(55986159-55986367)
chr4 (557-762)||(55984768-55984974)
chr4 (768-900)||(31883986-31884118)
chr4 (573-764)||(40169645-40169836)
chr4 (222-404)||(9180161-9180352)
chr4 (558-765)||(48157530-48157736)
chr4 (558-765)||(9178635-9178841)
chr4 (558-692)||(9180521-9180655)
chr4 (603-768)||(40168636-40168801)
chr4 (558-767)||(48157118-48157327)
chr4 (18-88)||(9180080-9180150)
chr4 (619-686)||(8747770-8747837)
chr4 (86-125)||(55986007-55986046)
chr4 (628-686)||(8748968-8749026)
chr4 (86-125)||(55985056-55985095)
chr4 (371-406)||(55985912-55985947)
chr4 (599-653)||(10470660-10470714)
chr4 (599-653)||(25685048-25685102)
[»] chr1 (3 HSPs)
chr1 (558-768)||(46313125-46313335)
chr1 (558-767)||(50379823-50380032)
chr1 (603-678)||(46312153-46312228)
[»] scaffold1458 (1 HSPs)
scaffold1458 (709-770)||(1466-1527)
[»] scaffold0515 (1 HSPs)
scaffold0515 (709-770)||(3634-3695)
[»] scaffold0306 (1 HSPs)
scaffold0306 (709-770)||(3634-3695)


Alignment Details
Target: chr6 (Bit Score: 430; Significance: 0; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 208 - 766
Target Start/End: Original strand, 16863996 - 16864551
Alignment:
Q  208 ttccatattcgaatctttcttcttctctgaaccttcagtcgccatcgcatcgttcttcttattctttgttcttgtactccccgtcgcatctttattcttc 307  Q
    ||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16863996 ttccatattggaatctttcttcttctgtgaaccttcaatcgccatcgcatcgttcttcttattctttgttcttgtactccccgtcgcatctttattcttc 16864095  T
Q  308 accctataacccgtactcgccgtcgccttttcatcttctttccacttcattttcgcaacaaacggagatgaacaatcacctggaattcgatttgtgatgg 407  Q
    |||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16864096 accctagaatccgtactcgccgtcgcctttccatcttctttccacttcattttcgcaacaaacggagatgaaaaatcacctggaattcgatttgtgatgg 16864195  T
Q  408 atatttgatttatgtaacgattttggaaggagattattgatgaacaatggatttggaaacttaagggtttgtggtttaaccctagaatctgaaaatgcaa 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16864196 atatttgatttatgtaacgattttggaaggagattattgatgaacaatggatttggaaacttaagggtttgtggtttaaccctagaatctgaaaatgcaa 16864295  T
Q  508 ttctccacaaaactctcacgtgccaacaccttctatannnnnnnnnnnnccaagcattacacaattggctttttgaataaaaataaatgggaaaatacac 607  Q
    |||||||||||||||||||||||||||||||||||||            |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16864296 ttctccacaaaactctcacgtgccaacaccttctata---tttttttttccaaccattacacaattggctttttgaataaaaataaatgggaaaatacac 16864392  T
Q  608 atgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnna 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||        |    
T  16864393 atgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaggtctgttttgcaaaggggctaaaacataggggtttaatatttaatttttttta 16864492  T
Q  708 atagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagcct 766  Q
    ||||||| ||||||| |||| ||||| ||||||||||||||||||||||| ||||||||    
T  16864493 ataggggaccaaaatcgcaccattgtaaaagttagggggttaaaactgcagtttagcct 16864551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 16864002 - 16863807
Alignment:
Q  18 tatggaagttacatcaactcaaggaaacgtgttctctggacagatttccgacatggatgcttcaaagtaagaagaacagatgaagaagaagggttgaaga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16864002 tatggaagttacatcaactcaaggaaacgtgttctctggacagattcccgacatggatgcttcaaagtaagaagaacagatgaagaagaagggttgaaga 16863903  T
Q  118 attgggggatactccatactttatcttgaaccattccatcagaaatcattcctgatgttgctcccgagtttcgcttttgatgttgtggctttccat 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16863902 attgggggatactccatactttatcttgaaccattccatcagaagtcattcctgatgttgctcccgagtttcgcttttgatgttgtggctttccat 16863807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 557 - 769
Target Start/End: Complemental strand, 6977235 - 6977023
Alignment:
Q  557 ccaagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagt 656  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  6977235 ccaagcattacacaattggctttttgaataaaaataaatgaaaaaatacatatgtggtatgacacctccgcgttgacctggtcaaaattgaccaaaaggt 6977136  T
Q  657 ctgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgc 756  Q
    |||||||||||| ||||||||||||| |||||||||||||||        ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6977135 ctgttttgcaaaggggctaaaacataagggtttaaaatttaattttttttaatagggggccaaaattgcaccattgtgaaagttagggggttaaaactgc 6977036  T
Q  757 aatttagcctatt 769  Q
    | |||||||||||    
T  6977035 agtttagcctatt 6977023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 566 - 767
Target Start/End: Complemental strand, 16859535 - 16859334
Alignment:
Q  566 acacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgc 665  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16859535 acacaattggctttttgaataaaaataaatgggaaaatacacatgtggtatgacacctccgcgttgacctggtcaaaattgaccaaaaggtctgttttgc 16859436  T
Q  666 aaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagcc 765  Q
    ||| |||||||||||||||||||||||||||||        ||||||||| |||||| |||| |||||||||||||||||||||||| |||| |||||||    
T  16859435 aaaggggctaaaacataggggtttaaaatttaattttttttaatagggggtcaaaatcgcaccattgtgaaagttagggggttaaaattgcagtttagcc 16859336  T
Q  766 ta 767  Q
    ||    
T  16859335 ta 16859334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 557 - 765
Target Start/End: Original strand, 6977986 - 6978195
Alignment:
Q  557 ccaagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagt 656  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  6977986 ccaagcattacacaattggctttttgaataaaaataaatggaaaaatacacatgcggcatgacacctccgcgttgacctggtcaaaattgaccaaaaggt 6978085  T
Q  657 ctgttttgcaaaagggctaaaacataggggtttaaaatttaa-nnnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactg 755  Q
    |||||||||||| ||||||||||||| |||||||||||||||         ||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  6978086 ctgttttgcaaaggggctaaaacataagggtttaaaatttaatttttttttaatagggagccaaaatcgcaccattgtgaaagttagggggttaaaactg 6978185  T
Q  756 caatttagcc 765  Q
    || |||||||    
T  6978186 cagtttagcc 6978195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 558 - 767
Target Start/End: Complemental strand, 20409274 - 20409065
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||    
T  20409274 caagtattacacaagtggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacccggtcaaaattgaccataaggtc 20409175  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||||||||||||| ||| |        |||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  20409174 tcttttgcaaaggggctaaaacataggggtttaaattttcattttttttaatagggggccaaaatcgcaccattgtgaaagttagggggtcaaaactgca 20409075  T
Q  758 atttagccta 767  Q
     |||||||||    
T  20409074 gtttagccta 20409065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 208 - 484
Target Start/End: Complemental strand, 12182196 - 12181917
Alignment:
Q  208 ttccatattcgaatctttcttcttctctgaaccttcagtcgccatcgcatcgttcttcttattctttgttcttgtactccccgtcgcatctttattcttc 307  Q
    |||||||||| ||||| || ||||||||||||||| |||||   ||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  12182196 ttccatattcaaatctctcgtcttctctgaacctttagtcgttgtcgcatccttcttcttcttctttgttcctgtactccctgtcgcatctttattcttc 12182097  T
Q  308 accctat---aacccgtactcgccgtcgccttttcatcttctttccacttcattttcgcaacaaacggagatgaacaatcacctggaattcgatttgtga 404  Q
      | | |   |||| ||||||| || ||||||| |||||||   ||| ||||||||||||||||||  ||||||| ||  |||||  | ||||||| |||    
T  12182096 ttcttcttcgaacctgtactcgtcgccgcctttccatcttcaacccatttcattttcgcaacaaacaaagatgaagaaaaacctgacaatcgatttatga 12181997  T
Q  405 tggatatttgatttatgtaacgattttggaaggagattattgatgaacaatggatttggaaacttaagggtttgtggttt 484  Q
     ||||||| || ||  | ||| |||| ||||||||||||| |||||| | | |||||||||||||| |||||||||||||    
T  12181996 aggatattcgaattcagaaacaatttgggaaggagattatggatgaagatttgatttggaaacttaggggtttgtggttt 12181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 603 - 766
Target Start/End: Original strand, 20410113 - 20410276
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacataggggtttaaaatttaannnn 702  Q
    |||||||||||||||||||||  ||||||||| ||||||||||| |||||| |||  ||||||||| ||||||||||||| ||||||||| ||| |        
T  20410113 tacacatgtggcatgacacctaggcgttgaccaggtcaaaattggccaaaaggtcacttttgcaaaggggctaaaacataagggtttaaattttcatttt 20410212  T
Q  703 nnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagcct 766  Q
        ||||||||| |||||| |||| ||||| ||||||||||||| ||||||||| ||||||||    
T  20410213 ttttaatagggggtcaaaatcgcaccattgtaaaagttagggggtcaaaactgcagtttagcct 20410276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 619 - 686
Target Start/End: Complemental strand, 12181741 - 12181674
Alignment:
Q  619 cacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    |||||||| ||||||| |||||||||||||||||  |||  ||||||||| |||||||||||||||||    
T  12181741 cacctccgtgttgacccggtcaaaattgaccaaatggtcacttttgcaaaggggctaaaacatagggg 12181674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 12182190 - 12182260
Alignment:
Q  18 tatggaagttacatcaactcaaggaaacgtgttctctggacagatttccgacatggatgcttcaaagtaag 88  Q
    ||||||||||  |||||||||||||||| |||||  |||| ||||| ||||||||||||||||| ||||||    
T  12182190 tatggaagttcaatcaactcaaggaaacatgttcaatggaaagattcccgacatggatgcttcatagtaag 12182260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 6977867 - 6977907
Alignment:
Q  85 taagaagaacagatgaagaagaagggttgaagaattggggg 125  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  6977867 taagaagaacagatgaagaagaagggttgaagaatttgggg 6977907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 16863546 - 16863511
Alignment:
Q  86 aagaagaacagatgaagaagaagggttgaagaattg 121  Q
    ||||||||||||||||||||||||||||||||||||    
T  16863546 aagaagaacagatgaagaagaagggttgaagaattg 16863511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 619 - 680
Target Start/End: Original strand, 12182707 - 12182768
Alignment:
Q  619 cacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaaca 680  Q
    |||||||| ||||| |||||||||||||||||||| |||  |||| |||| |||||||||||    
T  12182707 cacctccgtgttgatctggtcaaaattgaccaaaatgtcactttttcaaaggggctaaaaca 12182768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 6977349 - 6977316
Alignment:
Q  92 aacagatgaagaagaagggttgaagaattggggg 125  Q
    ||||||||||||||||||||||||||||| ||||    
T  6977349 aacagatgaagaagaagggttgaagaatttgggg 6977316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 247; Significance: 1e-136; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 208 - 494
Target Start/End: Complemental strand, 1389796 - 1389510
Alignment:
Q  208 ttccatattcgaatctttcttcttctctgaaccttcagtcgccatcgcatcgttcttcttattctttgttcttgtactccccgtcgcatctttattcttc 307  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  1389796 ttccatattcaaatctttcttcttcactgaaccttcagtcgccatcgaatcgtccttcttattctttgttcttgtactccccgtcgcatctttgttcttc 1389697  T
Q  308 accctataacccgtactcgccgtcgccttttcatcttctttccacttcattttcgcaacaaacggagatgaacaatcacctggaattcgatttgtgatgg 407  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1389696 accctagaacccgtactcgccgtcgcctttccatcttctttccacttcattttcacaacaaacggagatgaacaatcacctggaattcgatttgtgatgg 1389597  T
Q  408 atatttgatttatgtaacgattttggaaggagattattgatgaacaatggatttggaaacttaagggtttgtggtttaaccctagaa 494  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1389596 atatttgatttctgtaacgattttggaaggagattattgaagaacaatggatttggaaacttaagggtttgtggtttaaccctagaa 1389510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 563 - 765
Target Start/End: Complemental strand, 1389434 - 1389233
Alignment:
Q  563 attacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttt 662  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  1389434 attacacaattggctttttgatttaaaataaatggggaaatacacatgtggcatgacacatccgcgttgacctggtcaaaattgaccaaaaggtctgttt 1389335  T
Q  663 tgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaattta 762  Q
    |||||| ||||||||||||| |||||||||||||||        |||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||    
T  1389334 tgcaaaggggctaaaacataagggtttaaaatttaa-tttttttaatagggggccaaaatcgcaccattctgaaagttagggggttaaaactgcagttta 1389236  T
Q  763 gcc 765  Q
    |||    
T  1389235 gcc 1389233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 563 - 766
Target Start/End: Original strand, 1394710 - 1394913
Alignment:
Q  563 attacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttt 662  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||    
T  1394710 attacacaattggctttttgatttaaaataaatggggaaatacacatgtggcatgacacatccgcgttgacctgatcaaaattgaccaaaagatctgttt 1394809  T
Q  663 tgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaattta 762  Q
    |||||| ||||||||||||| |||||||||||||||        |||||||||| ||||| |||| ||| |||||||||||||||||||||||||  |||    
T  1394810 tgcaaaggggctaaaacataagggtttaaaatttaattttttttaatagggggctaaaatcgcaccattctgaaagttagggggttaaaactgcagatta 1394909  T
Q  763 gcct 766  Q
    ||||    
T  1394910 gcct 1394913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 558 - 767
Target Start/End: Original strand, 45413328 - 45413537
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||| |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| ||||  |||    
T  45413328 caagtattacacaagtggctttttgaataaaaa-aaatggggaaatacacatgtagcatgacacctccgcgttgacccggtcaaaattgatcaaatggtc 45413426  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaattt-aannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgc 756  Q
    | ||||||||| ||||||||||||||||||||||| ||| |         |||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  45413427 tcttttgcaaatgggctaaaacataggggtttaaattttcatttttttttaatagggggccaaaatcgcaccattgtgaaagttagggggtcaaaactgc 45413526  T
Q  757 aatttagccta 767  Q
    | |||||||||    
T  45413527 agtttagccta 45413537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 558 - 766
Target Start/End: Complemental strand, 45412543 - 45412334
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatg-ggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagt 656  Q
    |||| ||||||||| |||||||||||||||||| |||   || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||    
T  45412543 caagtattacacaagtggctttttgaataaaaaaaaaaaagggaaatacacatgtggcatgacacctccgcgttgacccggtcaaaattgatcaaatggt 45412444  T
Q  657 ctgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgc 756  Q
    || ||||||||| |||||||| |||||||||||||| ||| |        ||||||||| |||||| |||| ||||||||||||||||||| ||||||||    
T  45412443 ctattttgcaaaggggctaaatcataggggtttaaattttcattttttttaatagggggtcaaaatcgcaccattgtgaaagttagggggtcaaaactgc 45412344  T
Q  757 aatttagcct 766  Q
    | ||||||||    
T  45412343 agtttagcct 45412334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 208 - 378
Target Start/End: Original strand, 28851168 - 28851338
Alignment:
Q  208 ttccatattcgaatctttcttcttctctgaaccttcagtcgccatcgcatcgttcttcttattctttgttcttgtactccccgtcgcatctttattcttc 307  Q
    ||||||||||||||||||| ||||||||||| ||| ||| | | ||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  28851168 ttccatattcgaatctttcgtcttctctgaatctttagttgtcgtcgcatcattcttcttagtctttgttcttgtactccccgtcacatctttactcttc 28851267  T
Q  308 accctataacccgtactcgccgtcgccttttcatcttctttccacttcattttcgcaacaaacggagatga 378  Q
      | |  ||||||||||||||||| ||||| ||| ||||||||| |||||||||  ||||||| |||||||    
T  28851268 ctcgtcgaacccgtactcgccgtctcctttccattttctttccatttcattttcaaaacaaacagagatga 28851338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 586 - 765
Target Start/End: Original strand, 28851552 - 28851730
Alignment:
Q  586 aaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacataggg 685  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||||| | ||| ||||||||| |||| |||  ||||||||| |  |||||||||||||    
T  28851552 aaaaaaaaaagggaaaatacacatgtggcatgccacctccgcgttgatccggttaaaattgactaaaaggtcacttttgcaaaggaactaaaacataggg 28851651  T
Q  686 gtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagcc 765  Q
    ||| ||| ||| |        ||||||||| |||||| |||  ||||||||||||||||||| ||||||||| |||||||    
T  28851652 gttcaaattttca-ttttttaaatagggggtcaaaatcgcaacattgtgaaagttagggggtcaaaactgcagtttagcc 28851730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 558 - 762
Target Start/End: Complemental strand, 28847540 - 28847336
Alignment:
Q  558 caagcattacacaattggctttttgaat-aaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagt 656  Q
    |||| ||||||||  |||| |||||||| ||||| ||| | |||||||||||||| ||||| ||| |||| ||||||| | |||||||||||||||| ||    
T  28847540 caagtattacacaggtggcgttttgaattaaaaaaaaaagagaaaatacacatgtagcatgccacttccgtgttgacccgatcaaaattgaccaaaaggt 28847441  T
Q  657 ctgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgc 756  Q
    |  ||||||||| |||||||||||||||| || ||| ||| |        |||||||| |||||||||||  ||||||||| ||||||||| ||||||||    
T  28847440 cacttttgcaaaggggctaaaacatagggattcaaattttca-tttttttaataggggaccaaaattgcaacattgtgaaaattagggggtcaaaactgc 28847342  T
Q  757 aattta 762  Q
    | ||||    
T  28847341 agttta 28847336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 1389790 - 1389860
Alignment:
Q  18 tatggaagttacatcaactcaaggaaacgtgttctctggacagatttccgacatggatgcttcaaagtaag 88  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1389790 tatggaagttccatcatctcatggaaacgtgttctctggacagattcccgacatggatgcttcaaagtaag 1389860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 28851174 - 28851104
Alignment:
Q  18 tatggaagttacatcaactcaaggaaacgtgttctctggacagatttccgacatggatgcttcaaagtaag 88  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  28851174 tatggaagttccatcaactcaaagaaacgtgttctctggacagattcctgacatggatgcttcaaagtaag 28851104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 626 - 686
Target Start/End: Complemental strand, 10852051 - 10851991
Alignment:
Q  626 gcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    ||||||||||||||||||||||||||||  ||  ||||||||| |||||||||||||||||    
T  10852051 gcgttgacctggtcaaaattgaccaaaagttcacttttgcaaaggggctaaaacatagggg 10851991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 28847647 - 28847608
Alignment:
Q  86 aagaagaacagatgaagaagaagggttgaagaattggggg 125  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  28847647 aagaagaaaagatgaagaagaagggttgaagaattggggg 28847608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 406 - 484
Target Start/End: Original strand, 28851343 - 28851421
Alignment:
Q  406 ggatatttgatttatgtaacgattttggaaggagattattgatgaacaatggatttggaaacttaagggtttgtggttt 484  Q
    ||||||| |||||  | ||| |||| ||||||||||||| |||||| ||| |||||||||||||| ||| |||||||||    
T  28851343 ggatattcgatttcggaaactatttgggaaggagattatggatgaagaattgatttggaaacttacggggttgtggttt 28851421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 213; Significance: 1e-116; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 208 - 504
Target Start/End: Original strand, 48057892 - 48058188
Alignment:
Q  208 ttccatattcgaatctttcttcttctctgaaccttcagtcgccatcgcatcgttcttcttattctttgttcttgtactccccgtcgcatctttattcttc 307  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  48057892 ttccatattcgaatctttcgtcttctctgaacctttagtcgccatcgcatcgttcttcttattctttgttcgtgtacttcccgtcacatctttattcttc 48057991  T
Q  308 accctataacccgtactcgccgtcgccttttcatcttctttccacttcattttcgcaacaaacggagatgaacaatcacctggaattcgatttgtgatgg 407  Q
    ||| || ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||    
T  48057992 accatagaacccgtactcgccgccgcctttccatcttctttccacttcattttcacaacaaacagagatgaacaatcacctggaattcgatttgtgaagg 48058091  T
Q  408 atatttgatttatgtaacgattttggaaggagattattgatgaacaatggatttggaaacttaagggtttgtggtttaaccctagaatctgaaaatg 504  Q
    |||||||||||    ||||||||| |||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48058092 atatttgatttcgaaaacgattttcgaaggagattatggatgaagaactgatttggaaacttaagggtttgtggtttaaccctagaatctgaaaatg 48058188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 558 - 768
Target Start/End: Original strand, 54539349 - 54539559
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  54539349 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgacaaaaatgtc 54539448  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||| |||| ||||| ||||||| |||||||||||||||    
T  54539449 tgttttgcaaaggggctaaaacataggggtttaaaatttaattttttttaatagggggccaaaatcgcaccattgtcaaagttaaggggttaaaactgca 54539548  T
Q  758 atttagcctat 768  Q
     ||||||||||    
T  54539549 gtttagcctat 54539559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 558 - 762
Target Start/End: Complemental strand, 48053332 - 48053129
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||    
T  48053332 caagtattacacaagtggccttttgaataaaaataaatgggaaaatacacatgtggcatgacaccttcgcgttgacccggtcaaaattgaccaaaaggtc 48053233  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||||||||||||| ||| |        |||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  48053232 tcttttgcaaatgggctaaaacataggggtttaaattttca-tttttttaatagggggccaaaatcgcaccattgtgaaagttagagggttaaaactgca 48053134  T
Q  758 attta 762  Q
     ||||    
T  48053133 gttta 48053129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 558 - 692
Target Start/End: Original strand, 48059020 - 48059154
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |     
T  48059020 caagtattacacaagtggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgatccggtcaaaattgaccaaaagata 48059119  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaa 692  Q
    | ||||||||| |||||||||||||||||||||||    
T  48059120 tcttttgcaaaggggctaaaacataggggtttaaa 48059154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 557 - 768
Target Start/End: Complemental strand, 54539303 - 54539106
Alignment:
Q  557 ccaagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagt 656  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  54539303 ccaagcattacacagttggctttttgaataaaaa-aaatgagaaaatacacatgtggcatgacacctccgcgttaacctggtcaaaattgaccaaaaggt 54539205  T
Q  657 ctgttttgcaaaagggctaaaacataggggtttaaaatttaa-nnnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactg 755  Q
    |||||||||||              |||||||||||||||||         ||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  54539204 ctgttttgcaa--------------aggggtttaaaatttaatttttttttaatagggggccaaaatcacaccattgtgaaagttagggggttaaaactg 54539119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 48057898 - 48057828
Alignment:
Q  18 tatggaagttacatcaactcaaggaaacgtgttctctggacagatttccgacatggatgcttcaaagtaag 88  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  48057898 tatggaagttctatcaactcaagaaaacgtgttctctggacagattcccgacatggatgcttcaaagtaag 48057828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 619 - 686
Target Start/End: Original strand, 32831002 - 32831069
Alignment:
Q  619 cacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  32831002 cacctccgcgttgacccggtcaaaattgaccaaaaagtcacttttgcaaaggggctaaaacatagggg 32831069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 48053479 - 48053440
Alignment:
Q  86 aagaagaacagatgaagaagaagggttgaagaattggggg 125  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48053479 aagaagaacagatgaagaagaagggttgaagaattggggg 48053440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 603 - 686
Target Start/End: Original strand, 51220499 - 51220582
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    ||||||||||||||| ||| |  || ||||   |||||||||||||||||| |||  ||||||||| |||||||||||||||||    
T  51220499 tacacatgtggcatgccacataagcattgattgggtcaaaattgaccaaaatgtcacttttgcaaaggggctaaaacatagggg 51220582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 686
Target Start/End: Complemental strand, 32829877 - 32829819
Alignment:
Q  628 gttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    ||||||| |||||||||||| ||||| |||  ||||||||| |||||||||||||||||    
T  32829877 gttgacccggtcaaaattgatcaaaaggtcacttttgcaaaggggctaaaacatagggg 32829819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 729 - 765
Target Start/End: Original strand, 48060802 - 48060838
Alignment:
Q  729 attgtgaaagttagggggttaaaactgcaatttagcc 765  Q
    ||||||||||||||||||||||||||||| |||||||    
T  48060802 attgtgaaagttagggggttaaaactgcagtttagcc 48060838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 686
Target Start/End: Original strand, 26723799 - 26723882
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    ||||||||||||||| ||| |  ||||||||  ||||||||||||| |||| |||  | ||||||| |||||||| ||||||||    
T  26723799 tacacatgtggcatgccacttaagcgttgactaggtcaaaattgactaaaaggtcactattgcaaaggggctaaatcatagggg 26723882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 709 - 767
Target Start/End: Original strand, 11413441 - 11413499
Alignment:
Q  709 tagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagccta 767  Q
    ||||||||||||||||||  ||||| ||| |||| ||| ||||||||||||| ||||||    
T  11413441 tagggggccaaaattgcaagattgtaaaacttagagggctaaaactgcaattaagccta 11413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 668
Target Start/End: Complemental strand, 51219611 - 51219546
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaa 668  Q
    |||||| |||||||| ||| |  |||||||| ||||||||||||||||||| |||  |||||||||    
T  51219611 tacacaggtggcatgtcacttaggcgttgacttggtcaaaattgaccaaaatgtcacttttgcaaa 51219546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 9e-91; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 558 - 767
Target Start/End: Complemental strand, 12962191 - 12961982
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12962191 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 12962092  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  12962091 tgttttgcaaaggggctaaaacataggggtttaaaatttaattttttttaatagggggccaaaatcgcaccattgtgaaagttagggggttaaaactgca 12961992  T
Q  758 atttagccta 767  Q
     |||||||||    
T  12961991 gtttagccta 12961982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 40471265 - 40471351
Alignment:
Q  127 tactccatactttatcttgaaccattccatcagaaatcattcctgatgttgctcccgagtttcgcttttgatgttgtggctttccat 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40471265 tactccatactttatcttgaaccattccatcagaaatcattcctgatgttgctcccgagtttcgcttttgatgttgtggctttccat 40471351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 619 - 686
Target Start/End: Complemental strand, 35080429 - 35080362
Alignment:
Q  619 cacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    |||||||||||||||| |||||||||||| ||||| |||  ||||||||| |||||||||||||||||    
T  35080429 cacctccgcgttgacccggtcaaaattgatcaaaaggtcacttttgcaaaggggctaaaacatagggg 35080362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 686
Target Start/End: Original strand, 35081522 - 35081580
Alignment:
Q  628 gttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    |||||||  ||||||||||||||||| |||  ||||||||| |||||||||||||||||    
T  35081522 gttgacccagtcaaaattgaccaaaaggtcacttttgcaaaggggctaaaacatagggg 35081580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 9e-85; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 302 - 494
Target Start/End: Original strand, 8067032 - 8067230
Alignment:
Q  302 ttcttcaccctataacccgtactcgc------cgtcgccttttcatcttctttccacttcattttcgcaacaaacggagatgaacaatcacctggaattc 395  Q
    |||||||||||| |||||||||||||      |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8067032 ttcttcaccctagaacccgtactcgccgtcgccgtcgcctttccatcttctttccacttcattttcgcaacaaacggagatgaacaatcacctggaattc 8067131  T
Q  396 gatttgtgatggatatttgatttatgtaacgattttggaaggagattattgatgaacaatggatttggaaacttaagggtttgtggtttaaccctagaa 494  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8067132 gatttgtgatggatatttgatttctgtaacgattttggaaggagattattgaagaacaatggatttggaaacttaagggtttgtggtttaaccctagaa 8067230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 563 - 766
Target Start/End: Complemental strand, 8062058 - 8061855
Alignment:
Q  563 attacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttt 662  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  8062058 attacacaattggctttttgatttaaaataaatggggaaatacacatgtggcatgacacatccgcgttgacctggtcaaaattgaccaaaaggtctgttt 8061959  T
Q  663 tgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaattta 762  Q
    |||||| ||||||||||||| |||||||||||||||        | |||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||    
T  8061958 tgcaaaggggctaaaacataagggtttaaaatttaattttttttactagggggccaaaatcgcaccattctgaaagttagggggttaaaactgcagttta 8061859  T
Q  763 gcct 766  Q
    ||||    
T  8061858 gcct 8061855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 563 - 767
Target Start/End: Original strand, 8067306 - 8067510
Alignment:
Q  563 attacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttt 662  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  8067306 attacacaattggctttttgatttaaaataaatggggaaatacacatgtggcatgacacatccgcgttgacctggtcaaaattgaccaaaaggtctgttt 8067405  T
Q  663 tgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaattta 762  Q
    |||||| ||||||||||||| |||||||||||||||        | |||||||||||||| |||| ||| |||||||||||||| |||||||||| ||||    
T  8067406 tgcaaaggggctaaaacataagggtttaaaatttaattttttttactagggggccaaaatcgcaccattctgaaagttaggggggtaaaactgcagttta 8067505  T
Q  763 gccta 767  Q
    |||||    
T  8067506 gccta 8067510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 558 - 765
Target Start/End: Original strand, 17415541 - 17415747
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||    
T  17415541 caagtattacacaagtggctttttgaataaaaataaatgggaaaatacacatgtggcatgatacctccgcgttgacccggtcaaaattgaccaaaaggtc 17415640  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||||||||||||| ||| |        || || |||||||||| |||| ||||||||||||||||||| |||||||||    
T  17415641 tcttttgcaaaggggctaaaacataggggtttaaattttca-tttttttaagagtgggccaaaatcgcaccattgtgaaagttagggggtcaaaactgca 17415739  T
Q  758 atttagcc 765  Q
     |||||||    
T  17415740 gtttagcc 17415747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 558 - 765
Target Start/End: Complemental strand, 14189871 - 14189664
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| |||    
T  14189871 caagtattacacaattggctttttcaataaaaataaatgggaaaatacacatgtggcatgacacatgcgcgttgacccggtcaaaattgaccaaaaggtc 14189772  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||||||||||||| | |||        | |||||| ||||||| ||||  || ||||||||||||||| |||||||||    
T  14189771 tcttttgcaaaggggctaaaacataggggtttaaattgtaattttttttattaggggaccaaaatcgcacctttatgaaagttagggggtcaaaactgca 14189672  T
Q  758 atttagcc 765  Q
     |||||||    
T  14189671 gtttagcc 14189664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 558 - 767
Target Start/End: Original strand, 14190339 - 14190547
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| |||    
T  14190339 caagtattacacaattggctttttcaataaaaataaatgggaaaatacacatgtggcatgacacatgcgcgttgacccggtcaaaattgaccaaaaggtc 14190438  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||||||||||||| | |||        | |||||| ||||||| ||||  || ||||||||||||||| |||||||||    
T  14190439 tcttttgcaaaggggctaaaacataggggtttaaattgtaa-tttttttattaggggaccaaaatcgcacctttatgaaagttagggggtcaaaactgca 14190537  T
Q  758 atttagccta 767  Q
     |||||||||    
T  14190538 gtttagccta 14190547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 558 - 767
Target Start/End: Complemental strand, 24242226 - 24242015
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaa-tgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagt 656  Q
    |||| ||||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||    
T  24242226 caagtattacacaagtggctttttgaataaaaaaaaaatggggaaatacacatgtggcatgacacctccgcgttgacccggtcaaaattgatcaaatggt 24242127  T
Q  657 ctgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaa-tagggggccaaaattgcactattgtgaaagttagggggttaaaactg 755  Q
    || ||||||||| ||||||||||||||||||||||| ||| |        || ||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  24242126 ctcttttgcaaaggggctaaaacataggggtttaaattttcattttttttaattagggggtcaaaatcgcacctttgtgaaagttagggggtcaaaactg 24242027  T
Q  756 caatttagccta 767  Q
    || |||||||||    
T  24242026 cagtttagccta 24242015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 14190161 - 14190040
Alignment:
Q  289 cgtcgcatctttattcttcaccctataacccgtactcgccgt------cgccttttcatcttctttccacttcattttcgcaacaaacggagatgaacaa 382  Q
    |||||||||||| ||||||||| || ||||||||||||||||      |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14190161 cgtcgcatcttttttcttcaccgtagaacccgtactcgccgttgccgtcgccttttcatcttctttccacttcattttcgcaacaaacagagatgaacaa 14190062  T
Q  383 tcacctggaattcgatttgtga 404  Q
    ||| |||||||| |||||||||    
T  14190061 tcaactggaatttgatttgtga 14190040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 603 - 765
Target Start/End: Complemental strand, 17414706 - 17414544
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacataggggtttaaaatttaannnn 702  Q
    |||||||||||||||||||||  ||||||||| ||||||||||| |||||| |||  ||||||||| ||||||||||||||||||||||| ||| |        
T  17414706 tacacatgtggcatgacacctaggcgttgaccaggtcaaaattggccaaaaggtcacttttgcaaaggggctaaaacataggggtttaaattttcatttt 17414607  T
Q  703 nnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagcc 765  Q
        |||||||||||||||| |||| ||||| |||||||| |||| ||||||||| |||||||    
T  17414606 ttttaatagggggccaaaatcgcaccattgtaaaagttagagggtcaaaactgcagtttagcc 17414544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 8066983 - 8066913
Alignment:
Q  18 tatggaagttacatcaactcaaggaaacgtgttctctggacagatttccgacatggatgcttcaaagtaag 88  Q
    |||||||||| ||| | |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8066983 tatggaagttccattatctcatggaaacgtgttctctggacagattcccgacatggatgcttcaaagtaag 8066913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 8066977 - 8067036
Alignment:
Q  208 ttccatattcgaatctttcttcttctctgaaccttcagtcgccatcgcatcgttcttctt 267  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  8066977 ttccatattcgaatctttcttcttcactgaaccttcagtcgccatcgaatcgtccttctt 8067036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 603 - 686
Target Start/End: Original strand, 5504032 - 5504115
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    |||||| |||||||| ||| |  |||||||| ||||||||||||||||||| |||  ||||||||| |||||||||||||||||    
T  5504032 tacacaggtggcatgccacttaggcgttgacttggtcaaaattgaccaaaatgtcacttttgcaaaggggctaaaacatagggg 5504115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 629 - 692
Target Start/End: Original strand, 25369281 - 25369344
Alignment:
Q  629 ttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacataggggtttaaa 692  Q
    |||||| |||||||||||||||||| |||| ||||||||| || ||||||||||||||||||||    
T  25369281 ttgacccggtcaaaattgaccaaaaggtctcttttgcaaagggactaaaacataggggtttaaa 25369344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 603 - 686
Target Start/End: Complemental strand, 121511 - 121428
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    |||||| |||||||| ||| |  |||||||| ||||||||||||||||||| |||  ||||||||| ||||||||| |||||||    
T  121511 tacacaggtggcatgccacttaggcgttgacttggtcaaaattgaccaaaatgtcacttttgcaaaggggctaaaatatagggg 121428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 603 - 686
Target Start/End: Original strand, 124426 - 124509
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    ||||||||||||||| ||| |  ||||||||  ||| |||||||||||||| |||  ||||||||| ||||||||| |||||||    
T  124426 tacacatgtggcatgccacataagcgttgactgggttaaaattgaccaaaatgtcacttttgcaaaggggctaaaatatagggg 124509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 603 - 686
Target Start/End: Complemental strand, 5503079 - 5502996
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    ||||||||||||||| ||| |  |||||||   |||||||||||||||||| |||  ||||||||| ||| |||||||||||||    
T  5503079 tacacatgtggcatgccacataagcgttgattgggtcaaaattgaccaaaatgtcacttttgcaaaggggttaaaacatagggg 5502996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 42196137 - 42196187
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaa 653  Q
    ||||||||||||||| ||  || |||||||| |||||||||||||||||||    
T  42196137 tacacatgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaa 42196187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 3e-81; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 557 - 766
Target Start/End: Complemental strand, 23039332 - 23039123
Alignment:
Q  557 ccaagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagt 656  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23039332 ccaagcattacacagttggctttttgaataaaaaaaaatgagaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaggt 23039233  T
Q  657 ctgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgc 756  Q
    |||||||||||| ||||||||||||||| |||||||||||||        ||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  23039232 ctgttttgcaaaggggctaaaacataggtgtttaaaatttaattttttttaatagggggccaaaattacaccattgtgaaagttagggggttaaaactgc 23039133  T
Q  757 aatttagcct 766  Q
    ||||||||||    
T  23039132 aatttagcct 23039123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 558 - 767
Target Start/End: Original strand, 23039378 - 23039587
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  23039378 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgacaaaaatgtc 23039477  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    ||||||||||| |||||||||||||||||||||||||||||        |||||||| ||||||| |||| ||||| ||||||| |||||||||||||||    
T  23039478 tgttttgcaaaggggctaaaacataggggtttaaaatttaattttttttaataggggaccaaaatcgcaccattgtcaaagttaaggggttaaaactgca 23039577  T
Q  758 atttagccta 767  Q
     |||||||||    
T  23039578 gtttagccta 23039587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 558 - 767
Target Start/End: Original strand, 38613268 - 38613477
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||    
T  38613268 caagtattacacaggtggctttttgaacaaaaataaatgggaaaatacacatgtggcatgccacctccgcgttgacccggtcaaaattgaccaaaaggtc 38613367  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||||||||||||| ||| |        |||||||||||||||| |||  ||||||||||||||||||| |||||||||    
T  38613368 tcttttgcaaaggggctaaaacataggggtttaaattttcattttttttaatagggggccaaaatcgcaacattgtgaaagttagggggtcaaaactgca 38613467  T
Q  758 atttagccta 767  Q
     |||||||||    
T  38613468 gtttagccta 38613477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 558 - 767
Target Start/End: Complemental strand, 38612426 - 38612217
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||| |||    
T  38612426 caagtattacacaggtggctttttgaataaaaataaatgggaaaatacacatgtggcatgccacctccgcgttgattcggtcaaaattgaccaaaaggtc 38612327  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||||||||||||| ||| |        |||||||||||||||| |||  ||||||||||||||||||| |||||||||    
T  38612326 tcttttgcaaaggggctaaaacataggggtttaaattttcattttttttaatagggggccaaaatcgcaacattgtgaaagttagggggtcaaaactgca 38612227  T
Q  758 atttagccta 767  Q
     |||||||||    
T  38612226 gtttagccta 38612217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 603 - 686
Target Start/End: Original strand, 13883766 - 13883849
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    ||||||||||||||| ||| |  ||||||||  | |||||||||||||||| |||  ||||||||| |||||||||||||||||    
T  13883766 tacacatgtggcatgccacataagcgttgactggatcaaaattgaccaaaatgtcacttttgcaaaggggctaaaacatagggg 13883849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 603 - 686
Target Start/End: Complemental strand, 13882817 - 13882734
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    |||||| |||||||| ||| |  |||||||| |||| |||||||||||||| |||  | ||||||| |||||||||||||||||    
T  13882817 tacacaggtggcatgccacttaggcgttgacttggttaaaattgaccaaaatgtcactcttgcaaaggggctaaaacatagggg 13882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 38613154 - 38613193
Alignment:
Q  86 aagaagaacagatgaagaagaagggttgaagaattggggg 125  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  38613154 aagaagaacagatgaagaagaaggattgaagaattggggg 38613193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 1e-80; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 557 - 765
Target Start/End: Original strand, 55986159 - 55986367
Alignment:
Q  557 ccaagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagt 656  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  55986159 ccaagcattacacaattggttttttgaataaaaataaatgggaaaatacacatgtggcatgacagctccgcgttgacctggtcaaaattgaccaaaaagt 55986258  T
Q  657 ctgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgc 756  Q
    |||||||||||| ||||||||||||| |||||||||||||||        ||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  55986259 ctgttttgcaaaggggctaaaacataagggtttaaaatttaattttttttaatagggggtcaaaatcgcaccattgtgaaagttagggggttaaaactgc 55986358  T
Q  757 aatttagcc 765  Q
    | |||||||    
T  55986359 agtttagcc 55986367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 557 - 762
Target Start/End: Complemental strand, 55984974 - 55984768
Alignment:
Q  557 ccaagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagt 656  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  55984974 ccaagcattacacaattgactttttgaataaaaataaatggaaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaggt 55984875  T
Q  657 ctgttttgcaaaagggctaaaacataggggtttaaaatttaa-nnnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactg 755  Q
    |||||||||||| ||||||||||||| |||||||||||||||         |||| |||| |||||| |||| |||||||||||||||||||||||||||    
T  55984874 ctgttttgcaaaggggctaaaacataagggtttaaaatttaatttttttttaataaggggtcaaaatcgcaccattgtgaaagttagggggttaaaactg 55984775  T
Q  756 caattta 762  Q
    || ||||    
T  55984774 cagttta 55984768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 768 - 900
Target Start/End: Original strand, 31883986 - 31884118
Alignment:
Q  768 tttgttattattgccattctaagttattttgctatctatattgtaagagttcggagaagtttgaattaactgtttgtttagcactaggctgtgatatgcc 867  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  31883986 tttgttattattgccattctaagttattttgctatctatattgtaagagttcggagaagtttgaattaactgtttgtttagcactaggccttgatatgcc 31884085  T
Q  868 tgttttaaatcctaaaattttatgctaataatt 900  Q
    |||||||||||||||||||||||||||||||||    
T  31884086 tgttttaaatcctaaaattttatgctaataatt 31884118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 573 - 764
Target Start/End: Original strand, 40169645 - 40169836
Alignment:
Q  573 tggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaaggg 672  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||| |||    
T  40169645 tggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacccggtcaaaattgaccaaaaggtctcttttgcaaagggg 40169744  T
Q  673 ctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagc 764  Q
    ||||| |||||||||||||| ||| |        |||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||    
T  40169745 ctaaaccataggggtttaaattttcattttttttaatagggggccaaaatcgcaccattgtgaaagttagggggtcaaaactgcagtttagc 40169836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 222 - 404
Target Start/End: Original strand, 9180161 - 9180352
Alignment:
Q  222 ctttcttcttctctgaaccttcagtcgccatcgcatcgttcttcttattctttgttcttgtactccc---cgtcgcatctttattcttcaccctataacc 318  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||   |||||||||||| ||||||||| || ||||    
T  9180161 ctttcgtcttctctgaacctttagtcgccatcgcatcattcttcttattctttgttcttatactccccgtcgtcgcatcttttttcttcaccgtagaacc 9180260  T
Q  319 cgtac------tcgccgtcgccttttcatcttctttccacttcattttcgcaacaaacggagatgaacaatcacctggaattcgatttgtga 404  Q
    |||||      |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  9180261 cgtactcgccgtcgccgtcgcctttccatcttctttccacttcattttcgcaacaaacagagatgaacaatcaactggaattcgatttgtga 9180352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 558 - 765
Target Start/End: Original strand, 48157530 - 48157736
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||| |||    
T  48157530 caagtattacacaattggctttttcaataaaaataaatgggaaaatacacatgtggcatgacacctgtgcgttgacccggtcaaaattgaccaaaaggtc 48157629  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||||||||||||| | |||        | |||||||||||||| ||||  || ||||||||||||||| |||||||||    
T  48157630 ttttttgcaaaggggctaaaacataggggtttaaattgtaa-tttttttattagggggccaaaatcgcacctttatgaaagttagggggtcaaaactgca 48157728  T
Q  758 atttagcc 765  Q
     |||||||    
T  48157729 gtttagcc 48157736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 558 - 765
Target Start/End: Complemental strand, 9178841 - 9178635
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||    
T  9178841 caagtattacacaattggctttttcaataaaaataaatgggaaaatacacatgtggcatgacacctgcgcgttgacccggtcaaaattgaccaaaaggtc 9178742  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||||||||||||| | |||         | ||||||||||||| ||||  || ||||||||||| ||| |||||||||    
T  9178741 tcttttgcaaaggggctaaaacataggggtttaaattgtaatttttttata-agggggccaaaatcgcacctttatgaaagttaggaggtcaaaactgca 9178643  T
Q  758 atttagcc 765  Q
     |||||||    
T  9178642 gtttagcc 9178635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 558 - 692
Target Start/End: Original strand, 9180521 - 9180655
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||| |||    
T  9180521 caagtattacacaattggctttttcaataaaaataaatgggaaaatacacatgtggcatgacacctgcgcgttgacccgatcaaaattgaccaaaaggtc 9180620  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaa 692  Q
    | ||||||||| |||||||||||||||||||||||    
T  9180621 tcttttgcaaaggggctaaaacataggggtttaaa 9180655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 40168801 - 40168636
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacataggggtttaaaatttaannnn 702  Q
    |||||||||||||||||||||  ||||||||| ||||||||||| |||||| |||  ||||||||| ||||||||||||||||||||||| ||| |        
T  40168801 tacacatgtggcatgacacctaggcgttgaccaggtcaaaattggccaaaaggtcacttttgcaaaggggctaaaacataggggtttaaattttcatttt 40168702  T
Q  703 nnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagcctat 768  Q
        |||||||||||||||| |||| ||||| ||||||||||||| ||||||||| ||||||||||    
T  40168701 ttttaatagggggccaaaatcgcaccattgtaaaagttagggggtcaaaactgcagtttagcctat 40168636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 558 - 767
Target Start/End: Complemental strand, 48157327 - 48157118
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| || |||||||| | | |||||||||| ||||| |||    
T  48157327 caagtattacacaattggctttttcaataaaaataaatgggataatacacatgtggcataacatctgcgcgttgatccgatcaaaattgatcaaaaggtc 48157228  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| |||||||||||||||| |||||| | |||        | ||||||| ||||||   ||  || ||||||||||||||| |||||||||    
T  48157227 tcttttgcaaaggggctaaaacatagggttttaaattgtaattttttttattagggggtcaaaatcatacctttatgaaagttagggggtcaaaactgca 48157128  T
Q  758 atttagccta 767  Q
     |||||||||    
T  48157127 gtttagccta 48157118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 9180150 - 9180080
Alignment:
Q  18 tatggaagttacatcaactcaaggaaacgtgttctctggacagatttccgacatggatgcttcaaagtaag 88  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9180150 tatggaagttccatcaactcaaggaaacgtgttctctggacagattcccgacatggatgcttcaaagtaag 9180080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 619 - 686
Target Start/End: Complemental strand, 8747837 - 8747770
Alignment:
Q  619 cacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    |||||||||||||||| |||||||||||| ||||| |||  ||||||||| |||||||||||||||||    
T  8747837 cacctccgcgttgacccggtcaaaattgatcaaaaggtcacttttgcaaaggggctaaaacatagggg 8747770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 55986007 - 55986046
Alignment:
Q  86 aagaagaacagatgaagaagaagggttgaagaattggggg 125  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55986007 aagaagaacagatgaagaagaagggttgaagaattggggg 55986046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 686
Target Start/End: Original strand, 8748968 - 8749026
Alignment:
Q  628 gttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaacatagggg 686  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  8748968 gttgacccagtcaaaattgaccaaaaagtcacttttgcaaaggggctaaaacatagggg 8749026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 55985095 - 55985056
Alignment:
Q  86 aagaagaacagatgaagaagaagggttgaagaattggggg 125  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  55985095 aagaagaacatatgaagaagaagggttgaagaattggggg 55985056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 406
Target Start/End: Original strand, 55985912 - 55985947
Alignment:
Q  371 ggagatgaacaatcacctggaattcgatttgtgatg 406  Q
    ||||||||||||||||||||||||||||||||||||    
T  55985912 ggagatgaacaatcacctggaattcgatttgtgatg 55985947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 599 - 653
Target Start/End: Complemental strand, 10470714 - 10470660
Alignment:
Q  599 aaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaa 653  Q
    ||||||||||||||||||| ||  || |||||||| ||||||||||||| |||||    
T  10470714 aaaatacacatgtggcatgccatatcagcgttgacttggtcaaaattgatcaaaa 10470660  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 599 - 653
Target Start/End: Complemental strand, 25685102 - 25685048
Alignment:
Q  599 aaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaa 653  Q
    ||||||||||||||||||| ||  || |||||||| ||||||||||||| |||||    
T  25685102 aaaatacacatgtggcatgccaaatcagcgttgacttggtcaaaattgatcaaaa 25685048  T

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Target: chr1 (Bit Score: 127; Significance: 4e-65; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 558 - 768
Target Start/End: Original strand, 46313125 - 46313335
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||    
T  46313125 caagtattacacaagtggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgatccggtcaaaattgaccaaaaggtc 46313224  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||| ||||||||| ||| |        |||||||||||||||| ||||  |||||||||||||||||| |||||||||    
T  46313225 tcttttgcaaaggggctaaaacataagggtttaaattttcattttttttaatagggggccaaaatcgcacctttgtgaaagttagggggtcaaaactgca 46313324  T
Q  758 atttagcctat 768  Q
     ||||||||||    
T  46313325 gtttagcctat 46313335  T

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Target: chr1; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 558 - 767
Target Start/End: Original strand, 50379823 - 50380032
Alignment:
Q  558 caagcattacacaattggctttttgaataaaaataaatgggaaaatacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtc 657  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| |||    
T  50379823 caagtattacacaattggctttttcaataaaaataaatgggaaaatacacatgtggcatgacacatgcgcgttgacccggtcaaaattgaccaaaaggtc 50379922  T
Q  658 tgttttgcaaaagggctaaaacataggggtttaaaatttaannnnnnnnaatagggggccaaaattgcactattgtgaaagttagggggttaaaactgca 757  Q
    | ||||||||| ||||||||||||| ||||||||| | |||        | |||||| ||||||| ||||  || ||||||||||||||| |||||||||    
T  50379923 tcttttgcaaaggggctaaaacatatgggtttaaattgtaattttttttattaggggaccaaaatcgcacctttatgaaagttagggggtcaaaactgca 50380022  T
Q  758 atttagccta 767  Q
     |||||||||    
T  50380023 gtttagccta 50380032  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 678
Target Start/End: Complemental strand, 46312228 - 46312153
Alignment:
Q  603 tacacatgtggcatgacacctccgcgttgacctggtcaaaattgaccaaaaagtctgttttgcaaaagggctaaaa 678  Q
    |||||| |||||||| |||||  ||||||||| ||||||||||| |||||| |||  ||||||||| || ||||||    
T  46312228 tacacacgtggcatgccacctaggcgttgaccaggtcaaaattggccaaaaggtcacttttgcaaagggactaaaa 46312153  T

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Target: scaffold1458 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 770
Target Start/End: Complemental strand, 1527 - 1466
Alignment:
Q  709 tagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagcctattt 770  Q
    ||||||||||||||  ||   ||||||||||||||||| ||||||||| ||| |||||||||    
T  1527 tagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagcctattt 1466  T

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Target: scaffold0515 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 770
Target Start/End: Complemental strand, 3695 - 3634
Alignment:
Q  709 tagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagcctattt 770  Q
    |||||||||||||| |||   ||| ||||||||||||| ||||||||| ||| |||||||||    
T  3695 tagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctattt 3634  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 770
Target Start/End: Complemental strand, 3695 - 3634
Alignment:
Q  709 tagggggccaaaattgcactattgtgaaagttagggggttaaaactgcaatttagcctattt 770  Q
    |||||||||||||| |||   ||| ||||||||||||| ||||||||| ||| |||||||||    
T  3695 tagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctattt 3634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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