View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20505_low_23 (Length: 288)
Name: NF20505_low_23
Description: NF20505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20505_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 134 - 280
Target Start/End: Original strand, 48230150 - 48230296
Alignment:
| Q |
134 |
cttgtggagaagagaggaggaagaggaaggtcttcaagttcaacaccaccacccacttggagacttgttgactttccttcttcccaacaacaacagttcc |
233 |
Q |
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| T |
48230150 |
cttgtggagaagagaggaggaagaggaaggtcttcaagttcaacaccaccacccacttggagacttgttgactttccttcttcccaacaacaacagttcc |
48230249 |
T |
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| Q |
234 |
tcaactttcccacttcaaaaacactctctgcaagaaatctctgtgct |
280 |
Q |
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| T |
48230250 |
tcaactttcccacttcaaaaacactctctgcaagaaatctctgtgct |
48230296 |
T |
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