View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20506_high_7 (Length: 347)
Name: NF20506_high_7
Description: NF20506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20506_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 6 - 323
Target Start/End: Original strand, 11914440 - 11914759
Alignment:
| Q |
6 |
cataggttgaattgggaaacatatccaacatagcttttagtataaaattgtccttcattgacaaatttcatagggttgctatgaaatctaatatccttct |
105 |
Q |
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| T |
11914440 |
cataggttgaattgggaaacatatccaacatagcttttagtatagaattgtccttcattgacaaatttcatagggttgctatgaaatctaatatccttct |
11914539 |
T |
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| Q |
106 |
tgtcattagcccttcttttataagtggttgatctgattcatgc--tcccctggaattaacttgtcctagagagatgcttagcacctttacttcgcaatta |
203 |
Q |
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| T |
11914540 |
tgtcattagcccttcttttataagtggttgatctgattcatgcgatcccctggaattaacttgtcctagagagatgcttggcacctttacttcgcaatta |
11914639 |
T |
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| Q |
204 |
tcctcgacatgtaccaacaaaccataggagaaacaaaaatatggaaattttcatacctaaaatcaagttagtgaaggccatcagtttcattcccaatata |
303 |
Q |
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| T |
11914640 |
tcctcgatatgtaccaacaaaccataggagaaacaaaaatatggaaattttcatacctaaaatcaagttagtgaatgccatcagtttcattcccaatata |
11914739 |
T |
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| Q |
304 |
catacatgccttaataagtt |
323 |
Q |
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|||||||||||||||||||| |
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| T |
11914740 |
catacatgccttaataagtt |
11914759 |
T |
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