View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20506_low_7 (Length: 417)
Name: NF20506_low_7
Description: NF20506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20506_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 69 - 349
Target Start/End: Original strand, 8132245 - 8132525
Alignment:
| Q |
69 |
atgtcatctttaaaaacttatttattactatttactagtatcggtaaaattttgtataatataaaccaagtatcacccgtatgcaactacaaatacaagt |
168 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |
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| T |
8132245 |
atgtcatctttaaaaacttatttattactatttactagtatcagttaaattttgtatgatataaaccaagtatcatccgtgtgcaactacaaatacaagt |
8132344 |
T |
|
| Q |
169 |
acctatttcactgtatccacaaactcaccaaattctcaagttacatgactcggtctatattaagatctgaaggcccgactaattagcaacaacttcccct |
268 |
Q |
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|||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||| |
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| T |
8132345 |
acctattttactgtatccacaaacttaccaaattctcaagttacatgactcggtgtatattaacatctgaaggcccggctaattagcaacaacttcccct |
8132444 |
T |
|
| Q |
269 |
ttaatttttagggtttcagtttttctataaacaactaaccatgtttattaatccacacaccaaaacattcccttcactgta |
349 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |
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| T |
8132445 |
ttaatttttagggtttcagtttttctataaacaaccaaccatgtttataaattcacacaccaaaacattcccttcactgta |
8132525 |
T |
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