View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20507_high_15 (Length: 235)
Name: NF20507_high_15
Description: NF20507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20507_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 13075675 - 13075447
Alignment:
| Q |
1 |
ttgtcatggggtctatgcttatttcccctttgagaaggtcggagaatgcatttttgaaggaagctgaatggccaaatgcttgttgttctggacctggttc |
100 |
Q |
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| T |
13075675 |
ttgtcatggggtctatgcttatttcccctttgagaaggtcggagaatgcatttttgaaggaagctgaatggccaaatgcttgttgttctggacctggttc |
13075576 |
T |
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| Q |
101 |
tggttttgacggtgcttgtgcttgcgcttgtggaattaagagcgagtcgaaggatgcttctgaagaatgggtcggaggatgcgccgtgtgatgactagaa |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13075575 |
tggtttcgacggtgcttgtgcttgcgcttgtggaattaagagcgagtcgaaggatgcttctgaagaatgggtcggaggatgcgccgtgtgatgactagaa |
13075476 |
T |
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| Q |
201 |
tgggtcggaggatgttccatgtgatgatg |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
13075475 |
tgggtcggaggatgttccatgtgatgatg |
13075447 |
T |
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