View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20507_high_8 (Length: 276)
Name: NF20507_high_8
Description: NF20507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20507_high_8 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 6 - 260
Target Start/End: Original strand, 48740328 - 48740582
Alignment:
| Q |
6 |
tccaagaatatggtttaaaatgataaagatatttaagatggattagaccataacaatgattgaatagatattaattaaaagtactaatttcatagtttgt |
105 |
Q |
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| T |
48740328 |
tccaataaaatggtttaaaatgataaagatatttaagatggattagaccataacaatgattgaatagatattaattaaaagtactaatttcatagtttgt |
48740427 |
T |
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| Q |
106 |
cattatgacggatgacatgagtcgttacgaataaaagtgacccctaataaatcaaagaatcaaagttagagagaatttcaactctagggagactttatga |
205 |
Q |
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| T |
48740428 |
cattatgacggatgacatgagtcgttacgaataaaagtgacccctaataaatcaaagaatcaaagttagagagaatttcaactctagggagactttatga |
48740527 |
T |
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| Q |
206 |
aattgggtaaagaatatattttgatgtaataaatcagaataaaaagtgaagcatc |
260 |
Q |
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| T |
48740528 |
aattgggtaaagaatatattttgatgtaataaatcagaataaaaagtgaagcatc |
48740582 |
T |
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