View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20507_low_13 (Length: 240)
Name: NF20507_low_13
Description: NF20507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20507_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 10069452 - 10069683
Alignment:
| Q |
1 |
caccaccaaggttggttttgatagataagtgagaaaatgaagtttctttttctgttaccttaacaataggaaccaaagcagagagacgaagagtttaaaa |
100 |
Q |
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| T |
10069452 |
caccaccaaggttggttttgatagataagtgagaaaatgaagtttctttttctgttaccttaacaataggaaccaaagcagagagacgaagagtttaaaa |
10069551 |
T |
|
| Q |
101 |
ctcataaaagtaaagaatatgttgcatgcaacattgttaagaaagagtttctatggttacttgttgatgtgagtatt---agaagaagaagagaaaggga |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
10069552 |
ctcataaaagtaaagaatatgttgcatgcaacattgttaagaaagagtttctatggttacttgttgatgtgagtattagaagaagaagaagagaaaggga |
10069651 |
T |
|
| Q |
198 |
aagagcataaatgacgtagacagtgtgatgat |
229 |
Q |
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|||||| ||||||||||||||||||||||||| |
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| T |
10069652 |
aagagcgtaaatgacgtagacagtgtgatgat |
10069683 |
T |
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