View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20508_low_4 (Length: 349)

Name: NF20508_low_4
Description: NF20508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20508_low_4
NF20508_low_4
[»] chr5 (23 HSPs)
chr5 (1-169)||(34208538-34208706)
chr5 (1-169)||(12399055-12399223)
chr5 (1-169)||(23090298-23090466)
chr5 (1-169)||(4145694-4145862)
chr5 (1-169)||(29874954-29875122)
chr5 (3-170)||(4695273-4695440)
chr5 (1-169)||(3077597-3077765)
chr5 (35-154)||(42757953-42758072)
chr5 (1-104)||(22646018-22646121)
chr5 (100-170)||(42793039-42793109)
chr5 (100-169)||(41610625-41610694)
chr5 (3-154)||(12096313-12096466)
chr5 (102-166)||(4434783-4434847)
chr5 (136-171)||(42757803-42757838)
chr5 (136-170)||(12398945-12398979)
chr5 (136-169)||(29875198-29875231)
chr5 (136-169)||(42793562-42793595)
chr5 (137-169)||(23090543-23090575)
chr5 (137-169)||(41610373-41610405)
chr5 (120-154)||(594328-594362)
chr5 (100-166)||(8718028-8718094)
chr5 (3-169)||(19574686-19574852)
chr5 (136-169)||(34208782-34208815)
[»] chr8 (23 HSPs)
chr8 (1-169)||(33837838-33838006)
chr8 (1-169)||(2508905-2509073)
chr8 (1-169)||(45334385-45334553)
chr8 (4-169)||(28378947-28379112)
chr8 (1-169)||(25106211-25106379)
chr8 (1-170)||(38495581-38495750)
chr8 (1-169)||(9739985-9740153)
chr8 (39-164)||(13469652-13469777)
chr8 (46-169)||(27793345-27793468)
chr8 (1-125)||(2626346-2626472)
chr8 (3-169)||(32183592-32183759)
chr8 (100-169)||(27024433-27024502)
chr8 (102-169)||(25978969-25979036)
chr8 (101-169)||(8235162-8235230)
chr8 (107-154)||(2626667-2626714)
chr8 (137-171)||(9740231-9740265)
chr8 (136-170)||(33837728-33837762)
chr8 (136-169)||(25106455-25106488)
chr8 (136-169)||(27027655-27027688)
chr8 (136-169)||(28379191-28379224)
chr8 (136-169)||(45334276-45334309)
chr8 (136-170)||(38495471-38495505)
chr8 (137-169)||(13469508-13469540)
[»] chr6 (16 HSPs)
chr6 (1-169)||(32274434-32274602)
chr6 (1-169)||(27312225-27312393)
chr6 (1-167)||(8504811-8504977)
chr6 (2-162)||(5003889-5004049)
chr6 (1-169)||(29452651-29452820)
chr6 (1-171)||(31171099-31171269)
chr6 (67-169)||(12174700-12174802)
chr6 (1-108)||(2543142-2543249)
chr6 (1-169)||(7156346-7156502)
chr6 (54-170)||(18741946-18742062)
chr6 (121-169)||(29302500-29302548)
chr6 (136-169)||(8504733-8504766)
chr6 (136-169)||(27312114-27312147)
chr6 (136-169)||(2543325-2543358)
chr6 (136-169)||(32274678-32274711)
chr6 (137-169)||(18742191-18742223)
[»] chr3 (33 HSPs)
chr3 (1-169)||(39528749-39528917)
chr3 (1-169)||(41349480-41349648)
chr3 (1-169)||(1352105-1352273)
chr3 (1-169)||(18996967-18997135)
chr3 (1-169)||(18999506-18999674)
chr3 (1-169)||(29371647-29371815)
chr3 (1-169)||(32677586-32677754)
chr3 (1-169)||(39807088-39807256)
chr3 (1-169)||(28228436-28228604)
chr3 (1-169)||(36737943-36738111)
chr3 (6-169)||(55365908-55366071)
chr3 (3-166)||(21974152-21974315)
chr3 (3-166)||(21996583-21996746)
chr3 (1-163)||(38855323-38855485)
chr3 (3-166)||(22157261-22157424)
chr3 (1-162)||(29014799-29014960)
chr3 (1-154)||(39518422-39518575)
chr3 (1-170)||(32839948-32840116)
chr3 (3-154)||(49040955-49041107)
chr3 (100-170)||(49319346-49319416)
chr3 (136-171)||(39528993-39529028)
chr3 (136-170)||(1351995-1352029)
chr3 (136-169)||(18997211-18997244)
chr3 (136-169)||(18999750-18999783)
chr3 (136-169)||(29014690-29014723)
chr3 (136-169)||(36737834-36737867)
chr3 (136-169)||(38855561-38855594)
chr3 (136-169)||(39518651-39518684)
chr3 (136-169)||(41349371-41349404)
chr3 (137-169)||(46878980-46879012)
chr3 (136-169)||(29371538-29371571)
chr3 (136-169)||(32677477-32677510)
chr3 (136-169)||(39806979-39807012)
[»] chr7 (36 HSPs)
chr7 (1-169)||(17904163-17904331)
chr7 (1-170)||(26770178-26770347)
chr7 (1-169)||(29427273-29427441)
chr7 (1-170)||(37179441-37179609)
chr7 (1-170)||(46467444-46467613)
chr7 (1-169)||(6387801-6387969)
chr7 (1-161)||(9876271-9876431)
chr7 (1-169)||(29890935-29891103)
chr7 (17-172)||(6389729-6389884)
chr7 (1-169)||(41921963-41922131)
chr7 (1-169)||(4405109-4405277)
chr7 (46-165)||(31503091-31503210)
chr7 (70-166)||(9332364-9332460)
chr7 (60-169)||(19523863-19523974)
chr7 (3-149)||(9215573-9215722)
chr7 (3-169)||(12252069-12252238)
chr7 (27-154)||(33974506-33974636)
chr7 (3-154)||(46689878-46690033)
chr7 (101-169)||(29722955-29723023)
chr7 (3-169)||(31858203-31858371)
chr7 (100-169)||(43701551-43701620)
chr7 (100-172)||(33379175-33379247)
chr7 (3-149)||(5514797-5514945)
chr7 (99-154)||(49011065-49011120)
chr7 (3-169)||(33915717-33915884)
chr7 (1-79)||(22753177-22753257)
chr7 (3-111)||(48049057-48049168)
chr7 (136-170)||(29723381-29723415)
chr7 (136-170)||(37179330-37179364)
chr7 (136-169)||(4405353-4405386)
chr7 (136-169)||(17904407-17904440)
chr7 (136-169)||(29890826-29890859)
chr7 (137-169)||(46467335-46467367)
chr7 (136-170)||(6387691-6387725)
chr7 (1-47)||(31502763-31502809)
chr7 (137-169)||(26770424-26770456)
[»] chr1 (28 HSPs)
chr1 (1-169)||(47669119-47669287)
chr1 (1-170)||(46220258-46220427)
chr1 (1-171)||(9831501-9831671)
chr1 (1-169)||(10737810-10737978)
chr1 (1-169)||(4817269-4817437)
chr1 (1-169)||(18126851-18127018)
chr1 (1-171)||(3384704-3384872)
chr1 (1-169)||(48564818-48564985)
chr1 (1-169)||(4055484-4055652)
chr1 (1-168)||(7414208-7414375)
chr1 (1-154)||(8889457-8889610)
chr1 (67-169)||(1236205-1236307)
chr1 (1-149)||(39241172-39241320)
chr1 (229-349)||(48441844-48441965)
chr1 (93-169)||(1749524-1749600)
chr1 (100-170)||(33020205-33020275)
chr1 (3-146)||(26842462-26842606)
chr1 (136-169)||(10737701-10737734)
chr1 (136-169)||(46220503-46220536)
chr1 (136-169)||(47669363-47669396)
chr1 (136-168)||(1236071-1236103)
chr1 (3-169)||(33846764-33846935)
chr1 (3-169)||(33947043-33947214)
chr1 (138-169)||(48565063-48565094)
chr1 (136-166)||(9831747-9831777)
chr1 (136-169)||(8889687-8889720)
chr1 (136-169)||(33023428-33023461)
chr1 (136-169)||(37875727-37875760)
[»] chr2 (15 HSPs)
chr2 (1-167)||(15233757-15233923)
chr2 (1-169)||(43040958-43041126)
chr2 (1-169)||(35793016-35793183)
chr2 (1-169)||(41252415-41252583)
chr2 (1-169)||(31296083-31296251)
chr2 (1-169)||(41642891-41643062)
chr2 (1-170)||(44104656-44104834)
chr2 (1-154)||(31903489-31903641)
chr2 (100-169)||(10118660-10118729)
chr2 (3-154)||(21727684-21727838)
chr2 (136-170)||(43040848-43040882)
chr2 (136-169)||(10112339-10112372)
chr2 (136-169)||(15233999-15234032)
chr2 (100-169)||(36963131-36963200)
chr2 (137-169)||(44104546-44104578)
[»] chr4 (20 HSPs)
chr4 (1-169)||(8955885-8956053)
chr4 (1-169)||(45590742-45590910)
chr4 (1-159)||(34334342-34334500)
chr4 (1-169)||(33288514-33288682)
chr4 (1-170)||(18835704-18835875)
chr4 (25-163)||(49162108-49162245)
chr4 (1-154)||(50774167-50774325)
chr4 (77-169)||(30469353-30469445)
chr4 (70-166)||(39481906-39482002)
chr4 (1-103)||(36971115-36971216)
chr4 (100-169)||(19256186-19256255)
chr4 (3-154)||(26025639-26025784)
chr4 (119-169)||(36016279-36016329)
chr4 (100-154)||(36968353-36968407)
chr4 (3-154)||(33109009-33109163)
chr4 (135-169)||(19257103-19257137)
chr4 (136-166)||(8955779-8955809)
chr4 (136-169)||(45590986-45591019)
chr4 (136-169)||(49162332-49162365)
chr4 (136-168)||(39482106-39482138)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-169)||(44619-44788)


Alignment Details
Target: chr5 (Bit Score: 161; Significance: 8e-86; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 34208706 - 34208538
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34208706 tcattaaattcacatatgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 34208607  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34208606 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 34208538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12399055 - 12399223
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12399055 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 12399154  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12399155 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 12399223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 23090466 - 23090298
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23090466 tcattaaattcacatatgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 23090367  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23090366 taaaacatcaaaaattttggaatacagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 23090298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4145862 - 4145694
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  4145862 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttaagaaaacaataacaaattcac 4145763  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  4145762 taaaacatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaaggaatggagcgagta 4145694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 29875122 - 29874954
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  29875122 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 29875023  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29875022 taaaacatcaaatgttttggaatatagttgaagttctaaaacatcaaaagaaaaagaatggagggagta 29874954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 4695273 - 4695440
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcacta 102  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4695273 attaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcacta 4695372  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  4695373 aaacatcaaaagttttgaaatatagttgaagttctaaaaaatcaaaagaaaaggaatgaagggagtac 4695440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 3077765 - 3077597
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    |||||||||||| || |||||||  ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  3077765 tcattaaattcatatgtgataaacaaaatgtcacaactactttaatagtttattgtgttttccaacaaggataaacttgagaaaacaataacaaattcac 3077666  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  3077665 taaaacatcaaaagttttaaaatatagttgaaattctaaaacatcaaaagaaaatgaatggagggagta 3077597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 42757953 - 42758072
Alignment:
Q  35 aactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagt 134  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  42757953 aactactttaatagtttatcgtgttttccaacaaggataaacttgagaaaacaataataaattcactaaaacatcaaaagttttgaaaaatagttgaagt 42758052  T
Q  135 tctaaaacatcaaaagaaaa 154  Q
    |||||||||| |||| ||||    
T  42758053 tctaaaacataaaaaaaaaa 42758072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22646018 - 22646121
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||| || ||||| |||||||||||||||||||| ||||||||    
T  22646018 tcattaaattcacatgtgataaatcaaaagtcacaactactttaatagtttatggtgtttttcaacaaggttaaacttgagaaaacaataataaattcac 22646117  T
Q  101 taaa 104  Q
    ||||    
T  22646118 taaa 22646121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 42793109 - 42793039
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| ||||||    
T  42793109 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagtgagtac 42793039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 41610625 - 41610694
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||    
T  41610625 ctaaaacatcaaaagttttggaataaagtttaagttctaaaacatcaaaagaaaagaaatggagagagta 41610694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 12096313 - 12096466
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataacaaattc- 98  Q
    ||||||||| ||| |||||| |||| |||||| |||| ||||||||||| ||  |||||||| || |||| ||| ||||||||||| ||||  ||| |      
T  12096313 attaaattcgcatgtgataagtcaa-ggtcacgacta-tttaatagttttatggtgtgtttttcaacaagagtacacttgagaaaagaatattaaaatat 12096410  T
Q  99 actaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    | |||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  12096411 attaaaacatcaaatgttttggaatatagttgaagtcctaaaacatcaaaagaaaa 12096466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 4434847 - 4434783
Alignment:
Q  102 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||  | ||| |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  4434847 aaaacatcaaatatcttgaaataaagttgaagtcctaaaacatcaaaagaaaagaaatggaggga 4434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 171
Target Start/End: Complemental strand, 42757838 - 42757803
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtaca 171  Q
    ||||||||||||||||||||||||||||||||||||    
T  42757838 ctaaaacatcaaaagaaaaggaatggagggagtaca 42757803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 12398979 - 12398945
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||||||||||||||||||    
T  12398979 ctaaaacatcaaaagaaaaggaatggagggagtac 12398945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 29875198 - 29875231
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  29875198 ctaaaacatcaaaagaaaaggaatggagggagta 29875231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 42793562 - 42793595
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  42793562 ctaaaacatcaaaagaaaaggaatggagggagta 42793595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 23090543 - 23090575
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  23090543 taaaacatcaaaagaaaaggaatggagggagta 23090575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 41610405 - 41610373
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  41610405 taaaacatcaaaagaaaaggaatggagggagta 41610373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 594328 - 594362
Alignment:
Q  120 gaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  594328 gaatatagttgaagttttaaaacatcaaaagaaaa 594362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 8718094 - 8718028
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||  ||||| |||| ||||||| |  ||||| ||||||||||||| ||||||||||    
T  8718094 ctaaaacatcaaatattttgaaataaagttgaaatcttaaaatatcaaaagaaaagaaatggaggga 8718028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 19574852 - 19574686
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgt--tttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    |||||||||||||| ||||| ||||| |||| || |  ||||| ||||||| ||||  ||| || ||||||| | |||| ||||| ||||  ||||  |     
T  19574852 attaaattcacatacgataagtcaaatgtcataagtcatttaaaagtttatggtgtctttttcaacaagggtgaccttgggaaaa-aatattaaatatat 19574754  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||| |||  ||||| ||| || ||||||| |||||||||||||||| ||  |||||||||||||    
T  19574753 taaaacattaaatattttgaaatttaattgaagtcctaaaacatcaaaagacaa-aaatggagggagta 19574686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 34208782 - 34208815
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||| |||||||||||||||||||    
T  34208782 ctaaaacatcaaaaaaaaaggaatggagggagta 34208815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 2e-83; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 33837838 - 33838006
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33837838 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 33837937  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33837938 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 33838006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2508905 - 2509073
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  2508905 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttactgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 2509004  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2509005 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 2509073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 45334385 - 45334553
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  45334385 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgaaaaaacaataacaaattcac 45334484  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45334485 taaaacatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaaggaatggagggagta 45334553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 28379112 - 28378947
Alignment:
Q  4 ttaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaa 103  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  28379112 ttaaattcacatgcgataaatcaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaa 28379013  T
Q  104 aacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  28379012 aacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaataatggagggagta 28378947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 25106379 - 25106211
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | ||||||||    
T  25106379 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccatcaagggtaaacttgaaaaaacaatcataaattcac 25106280  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25106279 taaaacatcaaaaattttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagagagta 25106211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 38495581 - 38495750
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  38495581 tcattaaattcacatgtgataaaccaaatgtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 38495680  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
     |||||||||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  38495681 caaaacatcaaaaattttagaatatagttgaagttctaaaacatcacaagaaaaagaatggaggaagtac 38495750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 9740153 - 9739985
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| || ||||| ||||||||||||| |||||| |||||||     
T  9740153 tcattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgtttttcaacaaggataaacttgagaaagcaataataaattcag 9740054  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  9740053 taaaacatcaaaagttttgaaatatacatgaagttctaaaacatcaaaagaaaaggaatggagggagta 9739985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 39 - 164
Target Start/End: Original strand, 13469652 - 13469777
Alignment:
Q  39 actttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttcta 138  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  13469652 actttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaattataaatttactaaaatatcaaaagttttggaatatagttgaagttcta 13469751  T
Q  139 aaacatcaaaagaaaaggaatggagg 164  Q
    ||||||||||||||||||||||||||    
T  13469752 aaacatcaaaagaaaaggaatggagg 13469777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 27793345 - 27793468
Alignment:
Q  46 tagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 145  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  27793345 tagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaacattaaaagttttggaatatagttgaagatctaaaacatc 27793444  T
Q  146 aaaagaaaaggaatggagggagta 169  Q
    ||||||||| ||||||| ||||||    
T  27793445 aaaagaaaatgaatggaaggagta 27793468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2626346 - 2626472
Alignment:
Q  1 tcattaaatt-cacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaac-aataacaaattc 98  Q
    |||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  2626346 tcattaaatttcacatgtgataaaccaaaggtcacaattactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaaataataaattc 2626445  T
Q  99 actaaaacatcaaaagttttggaatat 125  Q
    |||||||||||||||||||||||||||    
T  2626446 actaaaacatcaaaagttttggaatat 2626472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 32183592 - 32183759
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttat--tgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||| ||||||  |||||||| ||||| ||| ||||||||||  ||||||||||| |||||||||||||| ||||| ||||  ||||  ||    
T  32183592 attaaattcacatgtgataagccaaaggtcgcaactcctt-aatagtttatggtgtgttttccaacaagggtaaacttgggaaaaaaatattaaatatac 32183690  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  32183691 taaaacatcaaatattttggaatatagttgaagttctaaaacatcaaaagaaaaaaaatgaagggagta 32183759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 27024502 - 27024433
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  27024502 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagggagta 27024433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 25978969 - 25979036
Alignment:
Q  102 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||| |||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  25978969 aaaacatcaaatgttttgaaataaagttgaagtcctaaaacatcaaaagaaaagaaatggagggagta 25979036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 8235230 - 8235162
Alignment:
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| |||||| |||| | ||||||| |||||||||||||||||||  |||||||||||||    
T  8235230 taaaacatcaaatgttttgaaataaaattgaagtcctaaaacatcaaaagaaaataaatggagggagta 8235162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 2626667 - 2626714
Alignment:
Q  107 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  2626667 atcaaaagttttggaatatagttgaagttctaaaatataaaaaaaaaa 2626714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 9740231 - 9740265
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagtaca 171  Q
    |||||||||||||||||||||||||||||||||||    
T  9740231 taaaacatcaaaagaaaaggaatggagggagtaca 9740265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 33837762 - 33837728
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||||||||||||||||||    
T  33837762 ctaaaacatcaaaagaaaaggaatggagggagtac 33837728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 25106455 - 25106488
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  25106455 ctaaaacatcaaaagaaaaggaatggagggagta 25106488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 27027655 - 27027688
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  27027655 ctaaaacatcaaaagaaaaggaatggagggagta 27027688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 28379191 - 28379224
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  28379191 ctaaaacatcaaaagaaaaggaatggagggagta 28379224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 45334309 - 45334276
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  45334309 ctaaaacatcaaaagaaaaggaatggagggagta 45334276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 38495505 - 38495471
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||| |||||||||||||||    
T  38495505 ctaaaacatcaaaagaaaatgaatggagggagtac 38495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 13469540 - 13469508
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||| ||||||    
T  13469540 taaaacatcaaaagaaaaggaatggaaggagta 13469508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 2e-83; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 32274602 - 32274434
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32274602 tcattaaagtcacatatgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 32274503  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32274502 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 32274434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 27312225 - 27312393
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  27312225 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 27312324  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27312325 taaaacatcaaatgttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 27312393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 8504811 - 8504977
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||| ||||| ||||||||    
T  8504811 tcattaaattcacatataataaaccaaaggtcacaactactttaatagtttattgtgtttttcaacaagggtaaacctgagaaaataataataaattcac 8504910  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggag 167  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  8504911 taaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaatgaatggagggag 8504977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 5004049 - 5003889
Alignment:
Q  2 cattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcact 101  Q
    |||||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  5004049 cattaaattcacctgtgataaatcaaatgtcaaaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcact 5003950  T
Q  102 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgga 162  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  5003949 aaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaaaaaaatgaatgga 5003889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29452651 - 29452820
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaa-taacaaattca 99  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||||| ||| |||||||    
T  29452651 tcattaaattcacatgtgataaatcaaaggtcacaactattttaatagtttatggtgttttccaacaagtgtaaacttgagaaaacaagtaataaattca 29452750  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| |  ||| ||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  29452751 ctaaaacatcaagaaatttagaatatagttgaagttctaaaacatcagaagaaaagaaatggagggagta 29452820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 31171099 - 31171269
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||  ||||||||||  || | |||||||||||||||||||| ||||||||    
T  31171099 tcattaaattcacatgtgataaaccaaaggtcacaactattttaatagtttaaggtgttttccaataaagataaacttgagaaaacaataataaattcac 31171198  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtaca 171  Q
    || |||||| || ||||||||||| | ||||| ||||||| |||||||||||||| |||||||||||||||    
T  31171199 tacaacatctaatgttttggaatacatttgaatttctaaatcatcaaaagaaaagaaatggagggagtaca 31171269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 12174802 - 12174700
Alignment:
Q  67 aagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  12174802 aagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatatttaaagttctaaaacattaaaagaaaaggaatggaggga 12174703  T
Q  167 gta 169  Q
    |||    
T  12174702 gta 12174700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2543249 - 2543142
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  2543249 tcattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcac 2543150  T
Q  101 taaaacat 108  Q
    ||||||||    
T  2543149 taaaacat 2543142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 7156346 - 7156502
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |||||||||| ||||            |||||||||| ||||||||    
T  7156346 tcattaaattcacatgtgataaaccaaatgtcacaattactttaatagtttatggtgttttccaacaag------------aaaacaataataaattcac 7156433  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||| |||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||    
T  7156434 taaaacatctaaagttttggaatatagttgattgtctaaaacatcaaaagaaaagaaatggagggagta 7156502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 18742062 - 18741946
Alignment:
Q  54 tgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 153  Q
    |||||||| || |||||||||| ||||||| ||||||  ||||  |||||||||||||| |||||| |||| ||||||||| ||||||||||||||||||    
T  18742062 tgtgtttttcaacaagggtaaatttgagaatacaatattaaatatactaaaacatcaaatgttttgaaataaagttgaagtcctaaaacatcaaaagaaa 18741963  T
Q  154 aggaatggagggagtac 170  Q
    || ||||||||||||||    
T  18741962 agaaatggagggagtac 18741946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 29302500 - 29302548
Alignment:
Q  121 aatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29302500 aatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29302548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 8504766 - 8504733
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  8504766 ctaaaacatcaaaagaaaaggaatggagggagta 8504733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 27312147 - 27312114
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  27312147 ctaaaacatcaaaagaaaaggaatggagggagta 27312114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 2543325 - 2543358
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  2543325 ctaaaacatcaaaagaaaacgaatggagggagta 2543358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 32274678 - 32274711
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  32274678 ctaaaacatcaaaagaaaatgaatggagggagta 32274711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 18742191 - 18742223
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| |||||||||||||    
T  18742191 taaaacatcaaaagaaaagaaatggagggagta 18742223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39528917 - 39528749
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39528917 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 39528818  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39528817 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 39528749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 41349480 - 41349648
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41349480 tcattaaattcacatgtgataaatcaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 41349579  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41349580 taaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 41349648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 1352105 - 1352273
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1352105 tcattaaattcacatgtgataaactaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 1352204  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1352205 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 1352273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18997135 - 18996967
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  18997135 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 18997036  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18997035 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18996967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18999674 - 18999506
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  18999674 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 18999575  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18999574 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18999506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29371647 - 29371815
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  29371647 tcattaaattcacatgtgataaaccaaaggtcacaagtactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 29371746  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29371747 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29371815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 32677586 - 32677754
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  32677586 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 32677685  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32677686 taaaacatcaaaagttttggtatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 32677754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 39807088 - 39807256
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  39807088 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacgagggtaaacttgagaaaacaataacaaattcac 39807187  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39807188 taaaacatcaaaagttttgtaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggaagta 39807256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 28228604 - 28228436
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  28228604 tcattaaattcacatgtgataaaccaaatgtcacagctactttaatagtttattgtattttccaacaagggtaaacttgagaaaacaataataaattcac 28228505  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28228504 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagagagta 28228436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 36737943 - 36738111
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  36737943 tcattaaattcacatgtgataaatcaaatgtcacaactactttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcac 36738042  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  36738043 taaaacatcaaaagttttaaaatatagttaaagttctaaaacatcaaaagaaaaggaatgaatggagta 36738111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 55366071 - 55365908
Alignment:
Q  6 aaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaaaa 105  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  55366071 aaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttctaacaagggtaaacttgagaaaacaataataaattcactaaaa 55365972  T
Q  106 catcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  55365971 catcaaaaaatttgaaatatagttgaagttctaaaacatcaaaagaaaaggaatgaagggagta 55365908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 21974315 - 21974152
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcacta 102  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||| |||||||||||||| ||||||||||    
T  21974315 attaaattcacatgtgataaaccaaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataataaattcacta 21974216  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21974215 aaacatcaaaagttttggaatatagttgaaattctaaaacatcaaaagaaaagaaatggaggga 21974152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 21996746 - 21996583
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcacta 102  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||| |||||||||||||| ||||||||||    
T  21996746 attaaattcacatgtgataaaccaaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataataaattcacta 21996647  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21996646 aaacatcaaaagttttggaatatagttgaaattctaaaacatcaaaagaaaagaaatggaggga 21996583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38855485 - 38855323
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| || ||||| |||| ||||||||||||||| ||||||||    
T  38855485 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttatggtgtttttcaacaaggataaaattgagaaaacaataataaattcac 38855386  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggag 163  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  38855385 taaaacatcaaaagttttggaatatagttgatgttttaaaacatcaaaagaaaaggaatggag 38855323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 22157424 - 22157261
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcacta 102  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||| |||||||||||||| ||||||||||    
T  22157424 attaaattcacatgtgataaaccaaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataataaattcacta 22157325  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  22157324 aaatatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaagaaatggaggga 22157261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29014799 - 29014960
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||  || ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  29014799 tcattaaattcacatgtgataaaccaaaaatcgcaactactttaatagtttaatgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 29014898  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgga 162  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  29014899 taaaacatcaaaagttttggaatatagttgaagttctaaaacataaaaaaaaaaagaatgga 29014960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 39518575 - 39518422
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  39518575 tcattaaattcacatgtgataaatcaaatgtcataactactttaatagtttattgtgttttccaacaaggataaacttgagaaaacaataataaattcac 39518476  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  39518475 taaaatatcaaaagttttgaaatatagttgaagttttaaaacatcaaaaaaaaa 39518422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 32840116 - 32839948
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| |||||||||| |||||||||||||||||||||| | |||||  |||||| |||||| |||||  |||||||    
T  32840116 tcattaaattcacatgtgataaaccaaatgtcacaactattttaatagtttattgtgttttctaacaaggacaaacttaagaaaataataa-taattcac 32840018  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||  |||  ||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  32840017 taaaacatcaaaaaatttaaaatatagttgaagttctaaaatataaaaagaaaatgaatggagggagtac 32839948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 49040955 - 49041107
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattg---tgttttccagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    ||||||||||||| ||||||| |||||||| ||||| ||||||||||||  ||   |||||| || ||||||||||| || |||||  |||  ||||  |    
T  49040955 attaaattcacatttgataaaccaaaggtcccaactcctttaatagttttatggtttgtttttcaacaagggtaaacgtgggaaaa--atattaaatata 49041052  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  49041053 ctaaaacatcaaatattttggaacatagttgaagttctaaaacatcaaaagaaaa 49041107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 49319416 - 49319346
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||||| |||||    
T  49319416 ctaaaacatcaaaatttttagaatgaagtttaagttctaaaacatcaaaagaaaaggaatggaggaagtac 49319346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 171
Target Start/End: Original strand, 39528993 - 39529028
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtaca 171  Q
    ||||||||||||||||||||||||||||||||||||    
T  39528993 ctaaaacatcaaaagaaaaggaatggagggagtaca 39529028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 1352029 - 1351995
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||||||||||||||||||    
T  1352029 ctaaaacatcaaaagaaaaggaatggagggagtac 1351995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 18997211 - 18997244
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  18997211 ctaaaacatcaaaagaaaaggaatggagggagta 18997244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 18999750 - 18999783
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  18999750 ctaaaacatcaaaagaaaaggaatggagggagta 18999783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 29014723 - 29014690
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  29014723 ctaaaacatcaaaagaaaaggaatggagggagta 29014690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 36737867 - 36737834
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  36737867 ctaaaacatcaaaagaaaaggaatggagggagta 36737834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 38855561 - 38855594
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  38855561 ctaaaacatcaaaagaaaaggaatggagggagta 38855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 39518651 - 39518684
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  39518651 ctaaaacatcaaaagaaaaggaatggagggagta 39518684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 41349404 - 41349371
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  41349404 ctaaaacatcaaaagaaaaggaatggagggagta 41349371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 46878980 - 46879012
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  46878980 taaaacatcaaaagaaaaggaatggagggagta 46879012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 29371571 - 29371538
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  29371571 ctaaaacatcaaaagaaaatgaatggagggagta 29371538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 32677510 - 32677477
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  32677510 ctaaaacatcaaaagaaaatgaatggagggagta 32677477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 39807012 - 39806979
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| ||||||||    
T  39807012 ctaaaacatcaaaagaaaaggaatgaagggagta 39806979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 5e-81; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 17904331 - 17904163
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  17904331 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 17904232  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17904231 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 17904163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 26770347 - 26770178
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  26770347 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 26770248  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26770247 taaaacatcaaaagttttggaatttagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 26770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29427273 - 29427441
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  29427273 tcattaaattcacatgtgataaaccaaagatcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 29427372  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29427373 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29427441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 37179441 - 37179609
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  37179441 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaactt-agaaaacaataataaattcac 37179539  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37179540 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 37179609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 46467444 - 46467613
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  46467444 tcattaaattcacatgtgataaaccaaaggtcgcaactactttaatagtttattgtgttttccaacaaaggtaaacttgagaaaacaataataaattcac 46467543  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46467544 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 46467613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6387801 - 6387969
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  6387801 tcattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgataaaacaataacaaattcac 6387900  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6387901 taaaacatcaaaagttttggaatatagttgcagttctaaaacatcaaaagaaaaggaatggagggagta 6387969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9876431 - 9876271
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||    
T  9876431 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttatggtgttttccaacaagggtaaaattgagaaaacaataataaattcac 9876332  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgg 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9876331 taaaacatcaaaagttttggaatatagttgaagttttaaaacatcaaaagaaaaggaatgg 9876271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29890935 - 29891103
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| | ||||||||    
T  29890935 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccatcaaggataaacttgagaaaacaatcataaattcac 29891034  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29891035 taaaacatcaaaaattttggaatatagttgaagttttaaaacatcaaaagaaaaggaatggagggagta 29891103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 6389884 - 6389729
Alignment:
Q  17 tgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6389884 tgataaatcaaatgtcacaactactttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaacatcaaaagtt 6389785  T
Q  117 ttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtacat 172  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  6389784 ttggaatatagttgaagttctaaaacatcaaaacaaaatgaatggagggagtacat 6389729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 41921963 - 41922131
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||| || ||||||||||||||| |||||||||  ||||||||    
T  41921963 tcattaaattcacatgtgataaaccaaaggttgcaactactttaatagtttattgtgtttttcaacaagggtaaacttgataaaacaatattaaattcac 41922062  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  41922063 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaagaaatagagggagta 41922131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4405277 - 4405109
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||| |||| ||||||||||||||| ||||||||    
T  4405277 tcattaaattcacatgtgataaaccaaaggtcacaactactttaataatttatggtgttttccaacaaggataaaattgagaaaacaataataaattcac 4405178  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  4405177 taaaacatcaaatgttttagaatatagttgaagttttaaaacatcaaaagaaaagaaatggagggagta 4405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 31503091 - 31503210
Alignment:
Q  46 tagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 145  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31503091 tagtttatagtgttttccaacaagggtaaacttaagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 31503190  T
Q  146 aaaagaaaaggaatggaggg 165  Q
    ||||||||||||| ||||||    
T  31503191 aaaagaaaaggaacggaggg 31503210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 9332460 - 9332364
Alignment:
Q  70 ggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  9332460 ggtaaacctgagaaaacaataataaattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaaaaaatggaggga 9332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 169
Target Start/End: Original strand, 19523863 - 19523974
Alignment:
Q  60 ttccagcaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatca--aaagaaaagga 157  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| |||||||    
T  19523863 ttccaacaagggtaaacttgataaaacaataataaattcactaaaacatcaaaaattttggaatatagttgaagttctaaaacatcaacaaaaaaaagga 19523962  T
Q  158 atggagggagta 169  Q
    || |||||||||    
T  19523963 atagagggagta 19523974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 9215573 - 9215722
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-attgtgt--tttccagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| ||| || ||||  ||| || |||||||||| |||| |||| ||||  | ||  |    
T  9215573 attaaattcacatgtgataaatcaaaggtcacaactcctttaataattttatggtgtctttttcaacaagggtaaatttgaaaaaaaaatattacatata 9215672  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaa 149  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  9215673 ctaaaacattaaatattttggaatatagttgaagttctaaaacatcaaaa 9215722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 12252238 - 12252069
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    ||||||||||||| ||||||  |||| |||| |||| |||||||||||| ||  |||||||| || | || ||||||||| |||||||| |  ||||  |    
T  12252238 attaaattcacatgtgataagccaaaagtcataactcctttaatagttttatggtgtgtttttcaactagagtaaacttgggaaaacaagattaaatata 12252139  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
     || |||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  12252138 ttagaacatcaaatattttggaatatagttgaagttctaaaacatcaaaagaaaaaaaatggagggagta 12252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 33974636 - 33974506
Alignment:
Q  27 aaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaat 123  Q
    |||||||||||| |||||||||||| ||  |||||||| || |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||    
T  33974636 aaggtcacaactcctttaatagttttatggtgtgtttttcaacaagggtaaacttgggaaaaaaatattaaatatactaaaacataaaatattttggaat 33974537  T
Q  124 atagttgaagttctaaaacatcaaaagaaaa 154  Q
    ||||||||||||| |||||||||||||||||    
T  33974536 atagttgaagttcgaaaacatcaaaagaaaa 33974506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 46690033 - 46689878
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-attgtgt---tttccagcaagggtaaacttgagaaaacaataacaaattc 98  Q
    ||||||||||||| ||||||  |||| ||||||||| |||||||||||| || ||||   ||| ||  ||||||||||||| ||||| ||||  ||        
T  46690033 attaaattcacatgtgataagccaaatgtcacaacttctttaatagttttatcgtgtgttttttcaaaaagggtaaacttgggaaaaaaatattaaccat 46689934  T
Q  99 actaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  46689933 actaaaacatcaagtattttggaatatagttgaagttctaaaacatcaaaagaaaa 46689878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 29723023 - 29722955
Alignment:
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||    
T  29723023 taaaacatcaaaagttttggaataaagtttaagttctaaaatatcaaaagaaaaggaatggagagagta 29722955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 31858203 - 31858371
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    |||||||| |||| |||||| |||||||||||||||  ||||||| ||| ||  |||||||| || | |||||||| ||| ||||| || |  ||||  |    
T  31858203 attaaatttacatgtgataagtcaaaggtcacaactcatttaatacttttatgatgtgtttttcaacgagggtaaatttgggaaaaaaa-attaaatata 31858301  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||  ||||  ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  31858302 ctaaaacatcaaatattttaaaatatagttgaagttgtaaaacatcaaaagaaaaaaaatggagggagta 31858371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 43701620 - 43701551
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||  |||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  43701620 ctaaaacatcaaattttttggaatgaagtttaagttctaaaacatcaaaagaaaaggaatggagggagta 43701551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 33379175 - 33379247
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtacat 172  Q
    |||||||||||||  ||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  33379175 ctaaaacatcaaatattttgaaatcaagttgaagttctaaaacatcaaaagaaaagaaatggagggagtacat 33379247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 5514945 - 5514797
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtt---tattgtgttttccagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||   || ||||||||  | ||||||||||||||| |||  ||||  ||||  |    
T  5514945 attaaattcacatgtgataaatcaaaggtcacaactcttttaatagttttatagtgtgttttttaacaagggtaaacttga-aaataaatattaaatata 5514847  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaa 149  Q
    |||||  ||||||  |||| ||||||| || |||||||||||||| ||||    
T  5514846 ctaaataatcaaatattttagaatatatttaaagttctaaaacattaaaa 5514797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 49011065 - 49011120
Alignment:
Q  99 actaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  49011065 actaaaacatcaaatgttttgaaatatagttgaagtcctaaaacatcaaaagaaaa 49011120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 33915884 - 33915717
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    |||||||||| |||||||||  |||||||||||||   ||||||||||| ||  |||||||| || ||||| |||||||| ||||| || |  ||||  |    
T  33915884 attaaattcatatatgataaggcaaaggtcacaacctatttaatagttttatggtgtgtttttcaacaagg-taaacttgggaaaaaaaaattaaatata 33915786  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||  ||||| ||||||||| || ||| |||||| ||||||||||  |||||||||||||    
T  33915785 ctaaaacatcaaatattttgaaatatagttaaaattcaaaaacaacaaaagaaaa-aaatggagggagta 33915717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22753177 - 22753257
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttat--tgtgttttccagcaagggtaaacttg 79  Q
    ||||||||||||||| |||||| |||||||||||||||  |||||||||||||  | ||||||||| |||| |||||||||    
T  22753177 tcattaaattcacatgtgataagtcaaaggtcacaacttttttaatagtttatagtttgttttccaacaagcgtaaacttg 22753257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 48049168 - 48049057
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtt---tattgtgttttccagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    |||||||| |||| ||||||  |||||||||||||| |||||||||||   || |||||||| || || ||||||||||| ||||| ||||  ||||  |    
T  48049168 attaaatttacatgtgataagccaaaggtcacaactcctttaatagttttctagtgtgtttttcaacaggggtaaacttgggaaaaaaatattaaatata 48049069  T
Q  100 ctaaaacatcaa 111  Q
    ||||||||||||    
T  48049068 ctaaaacatcaa 48049057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 170
Target Start/End: Original strand, 29723381 - 29723415
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||||||||||||||||||    
T  29723381 ctaaaacatcaaaagaaaaggaatggagggagtac 29723415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 37179364 - 37179330
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||||||||||||||||||    
T  37179364 ctaaaacatcaaaagaaaaggaatggagggagtac 37179330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 4405353 - 4405386
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  4405353 ctaaaacatcaaaagaaaaggaatggagggagta 4405386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 17904407 - 17904440
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  17904407 ctaaaacatcaaaagaaaaggaatggagggagta 17904440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 29890859 - 29890826
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  29890859 ctaaaacatcaaaagaaaaggaatggagggagta 29890826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 46467367 - 46467335
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  46467367 taaaacatcaaaagaaaaggaatggagggagta 46467335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 6387725 - 6387691
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||||||||| |||||    
T  6387725 ctaaaacatcaaaagaaaaggaatggaggaagtac 6387691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31502763 - 31502809
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaata 47  Q
    ||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  31502763 tcattaaattcacatgtgataagccaaaagtcacaactactttaata 31502809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 26770424 - 26770456
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||    
T  26770424 taaaacatcaaaagaaaatgaatggagggagta 26770456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 5e-81; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 47669287 - 47669119
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47669287 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 47669188  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47669187 taaaacatcaaaaattttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 47669119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 46220427 - 46220258
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46220427 tcattaaattcacatgtgataaactaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 46220328  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46220327 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatagagggagtac 46220258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9831671 - 9831501
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  9831671 tcattaaattcacatgtgataaaccaaaggtcacaactattttaatagtttattgtgttttccaacaagggtaaacttgagaaaataataacaaattcac 9831572  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtaca 171  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9831571 taaaacatcaaaagttttggaatatagttgaaattctaaaacatcaaaagaaaaggaatggagggagtaca 9831501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10737810 - 10737978
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    |||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  10737810 tcattaaattcagatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 10737909  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  10737910 taaaacatcaaaagttttagaatatagttgaagttctaaaacattaaaagaaaaggaatgaagggagta 10737978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4817437 - 4817269
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| |||||||  |||  |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  4817437 tcattaaattcacatgtgataaactaaatatcacaactaccttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaatgataaattcac 4817338  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4817337 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 4817269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18127018 - 18126851
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  18127018 tcattaaattcacatgtgataaaccaaaagtcacaactactt-aatagtttgttgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 18126920  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18126919 taaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18126851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 3384704 - 3384872
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  3384704 tcattaaattcacatgtgataaatcaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 3384803  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtaca 171  Q
    |||||||||||||||||||  | |||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  3384804 taaaacatcaaaagttttg--aaatagttgaggttctaaaacatcaaaagaaaaagaatgaagggagtaca 3384872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 48564985 - 48564818
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  48564985 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccatcaagggtaaacttgagaaaacaataataaattcac 48564886  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  48564885 taaaacatcaaaatttttggaatatagttgaagttttaaaacatc-aaagaaaagtaatggagggagta 48564818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4055652 - 4055484
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| || ||||||||||||| |||  |||||||||||||  |||||||||||||||||||||||||  |||||||    
T  4055652 tcattaaattcacatgtgataaaccaaatgttacaactactttaacagtgaattgtgttttccaataagggtaaacttgagaaaacaataattaattcac 4055553  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4055552 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 4055484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 7414375 - 7414208
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  7414375 tcattaaattcacatatgataaaccaaatgtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcac 7414276  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagt 168  Q
    |||||||||||||  |||  ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  7414275 taaaacatcaaaaaatttaaaatatagttgaagttctaaaacatcaaaaaaaaatgaatggagggagt 7414208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8889610 - 8889457
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  8889610 tcattaaattcacatgtgataaactaaaagtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcac 8889511  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  8889510 taaaacatcaaaagttttggaatatagttgaagttctaaaacataaaaaaaaaa 8889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 1236205 - 1236307
Alignment:
Q  67 aagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  1236205 aagggtaaacttgagaaaacaataataaattcactaaaccatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaatgaatggaggga 1236304  T
Q  167 gta 169  Q
    |||    
T  1236305 gta 1236307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 39241320 - 39241172
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggt-aaacttgagaaaacaataacaaattca 99  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||| || |||| || |||||||| | |||||||| |||||||    
T  39241320 tcattaaattcacatgtgataaatcaaaagtcacaactactttaatagtttatggtgtttttcaacaagagtaaaacttgatacaacaataataaattca 39241221  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaa 149  Q
    || ||||| ||||||||||| |||||||||||| ||||||||||| ||||    
T  39241220 ctgaaacaacaaaagttttgaaatatagttgaa-ttctaaaacattaaaa 39241172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 48441965 - 48441844
Alignment:
Q  229 atacaaatcatattcaataagaatnnnnnnnn-caaattcgacccaaaacttatgcaaaatccaatgcattataaaaactcgttcacatgggaagtgcag 327  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||||||||| ||    
T  48441965 atacaaatcatattcaataagaataaaaaaaaacaaattcgacccaaaacttatgcaaaatcaaatgcatgataaaagcacgttcacatgggaagtggag 48441866  T
Q  328 atcaatatgctcaatatgttag 349  Q
    ||||||||||||||| ||||||    
T  48441865 atcaatatgctcaatctgttag 48441844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 1749524 - 1749600
Alignment:
Q  93 aaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| ||||    
T  1749524 aaattcactaaaacatcaaaagttttggtatataattaaagttctaaaacatcaaaagaaaaggaatagaggaagta 1749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 33020275 - 33020205
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||    
T  33020275 ctaaaacatcaaaagttttggaaaaaagtttaagctctaaaacatcaaaagaaaaggaatggagggagtac 33020205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 26842606 - 26842462
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttat---tgtgttttccagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    ||||||||||||| |||||| ||||| ||||||| | ||| ||||||||     |||||||| || ||||| ||||||||| ||||  |||  ||||  |    
T  26842606 attaaattcacatgtgataagtcaaatgtcacaatttcttgaatagttttacgatgtgtttttcaacaaggataaacttgaaaaaa--atattaaatata 26842509  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatca 146  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||    
T  26842508 ctaaaacatcaaatattttgaaatatagttgaagttctaaaacatca 26842462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 10737734 - 10737701
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  10737734 ctaaaacatcaaaagaaaaggaatggagggagta 10737701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 46220503 - 46220536
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  46220503 ctaaaacatcaaaagaaaaggaatggagggagta 46220536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 47669363 - 47669396
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  47669363 ctaaaacatcaaaagaaaaggaatggagggagta 47669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 1236103 - 1236071
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagt 168  Q
    |||||||||||||||||||||||||||||||||    
T  1236103 ctaaaacatcaaaagaaaaggaatggagggagt 1236071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 33846764 - 33846935
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at----tgtgttttccagcaagggtaaacttgagaaaacaataac-aaat 96  Q
    ||||||||||||| | |||| ||||| |||||||||  ||||||||||| ||    ||||||||  | |||||||||||||||| ||| || ||  ||||    
T  33846764 attaaattcacatgtaataagtcaaatgtcacaacttatttaatagttttatggtgtgtgttttttaacaagggtaaacttgaggaaaaaaaaattaaat 33846863  T
Q  97 tcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
      ||| ||||||||||  ||||  |||| | |||||||  ||||||||||||||||||  |||||||||||||    
T  33846864 atactgaaacatcaaatattttaaaatacacttgaagtcttaaaacatcaaaagaaaa-aaatggagggagta 33846935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 33947214 - 33947043
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at----tgtgttttccagcaagggtaaacttgagaaaacaataac-aaat 96  Q
    ||||||||||||| | |||| ||||| |||||||||  ||||||||||| ||    ||||||||  | |||||||||||||||| ||| || ||  ||||    
T  33947214 attaaattcacatgtaataagtcaaatgtcacaacttatttaatagttttatggtgtgtgttttttaacaagggtaaacttgaggaaaaaaaaattaaat 33947115  T
Q  97 tcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
      ||| ||||||||||  ||||  |||| | |||||||  ||||||||||||||||||  |||||||||||||    
T  33947114 atactgaaacatcaaatattttaaaatacacttgaagtcttaaaacatcaaaagaaaa-aaatggagggagta 33947043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 169
Target Start/End: Original strand, 48565063 - 48565094
Alignment:
Q  138 aaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||    
T  48565063 aaaacatcaaaagaaaaggaatggagggagta 48565094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 166
Target Start/End: Original strand, 9831747 - 9831777
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||||||||||||||||||||    
T  9831747 ctaaaacatcaaaagaaaaggaatggaggga 9831777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 8889687 - 8889720
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||| |||||||||||||||||||    
T  8889687 ctaaaacatcaaaataaaaggaatggagggagta 8889720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 33023428 - 33023461
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||| ||||||||||||||||||||||||||    
T  33023428 ctaaaacgtcaaaagaaaaggaatggagggagta 33023461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 37875760 - 37875727
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||| |||||||||||||    
T  37875760 ctaaaacatcaaaagaaaagaaatggagggagta 37875727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 8e-80; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 15233923 - 15233757
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15233923 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 15233824  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggag 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15233823 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatagagggag 15233757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 43040958 - 43041126
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||    
T  43040958 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttatggtgttttccaacaagggtaaaattgagaaaacaataataaattcac 43041057  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43041058 taaaacatcaaaagttttggaatatagttgaagttttaaaacatcaaaagaaaaggaatggagggagta 43041126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 35793016 - 35793183
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    |||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| |    
T  35793016 tcattaaattcacatgcgataaaccaaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttga-aaaacaataataaattctc 35793114  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35793115 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaagaatggagggagta 35793183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 41252583 - 41252415
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| ||||||| ||||||||    
T  41252583 tcattaaattcacatgtgataaaacaaatgtcacaactactttaatagtttattgtattttccaacaaggataaacttgagaacacaataataaattcac 41252484  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  41252483 taaaacatcaaaagttttggaatatatttgaagttctaaaacataaaaagaaaaggaatggagggagta 41252415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 31296251 - 31296083
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||||||| || ||| |||||| ||||||||||||||| ||||||||    
T  31296251 tcattaaattcacatgtgataaaccaaatatcacaactactttaatagtttattgtgtttttcaacaaaggtaaatttgagaaaacaataataaattcac 31296152  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  31296151 taaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaaagaatggaaggagta 31296083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 41643062 - 41642891
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||||||    
T  41643062 tcattaaattaacatgtgataaatcaaaggtcacaactactttaatagtttatggtgttttccagaaaaggtaaacttgagaaaacaataataaattcac 41642963  T
Q  101 taaaacatcaaaagttttggaa--tatagttgaagttct-aaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||  |||||||||| |||| |||||||||||||||||| |||||||||||||    
T  41642962 taaaacatcaaaagttttggaatatatagttgaaattctaaaaacatcaaaagaaaagaaatggagggagta 41642891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 44104656 - 44104834
Alignment:
Q  1 tcattaaattcacatatgataaatca--aaggtcacaactactttaatagtttattgtgttttccagcaa-------gggtaaacttgagaaaacaataa 91  Q
    ||||||||||||||| ||||||| ||  |||||||||||||| ||||||||||||||||||||||| |||       ||||||||||||||||| |||||    
T  44104656 tcattaaattcacatgtgataaaccataaaggtcacaactaccttaatagtttattgtgttttccaacaatttataagggtaaacttgagaaaataataa 44104755  T
Q  92 caaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44104756 taaattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaaggaacggagggagtac 44104834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 31903489 - 31903641
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||| |||||||||| ||||| ||    
T  31903489 tcattaaattcacatgtgataatccaaaggtcacaactactttaatagtttatggtgttttccaataagggtaaac-tgataaaacaataataaatttac 31903587  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||| ||||    
T  31903588 taaaacatcaaaaaatttggaatatatttgaagttctaaaacatcaaaaaaaaa 31903641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 10118660 - 10118729
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||    
T  10118660 ctaaaacatcaaaagttttggaataaagtttaagctctaaaatatcaaaagaaaaggaatggagggagta 10118729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 21727838 - 21727684
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-attgtgttttc--cagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    ||||||||||||| ||||||  |||| | ||||||| |||||||||||| ||||||||||   || |||||||||| ||| | ||| ||||  |  |  |    
T  21727838 attaaattcacatgtgataaggcaaatgccacaactcctttaatagttttattgtgtttttttcaacaagggtaaatttggggaaaaaatattagttata 21727739  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    | |||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  21727738 ccaaaacatcaaatattttgaaatatagttgaagttctaaaacatcaaaagaaaa 21727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 43040882 - 43040848
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||||||||||||||||||    
T  43040882 ctaaaacatcaaaagaaaaggaatggagggagtac 43040848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 10112372 - 10112339
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  10112372 ctaaaacatcaaaagaaaaggaatggagggagta 10112339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 15233999 - 15234032
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  15233999 ctaaaacatcaaaagaaaaggaatggagggagta 15234032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 36963200 - 36963131
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||  ||||| |||| |||| || ||||||||||| |||||||||||||| ||| |||||    
T  36963200 ctaaaacatcaaattttttgaaataaagtttaaattctaaaacattaaaagaaaaggaatagagcgagta 36963131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 44104578 - 44104546
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  44104578 taaaacatcaaaagaaaaggaatggagggagta 44104546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 8955885 - 8956053
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  8955885 tcattaaattcacatgtgataaaccaaaggtcacaactactttaataatttattgtgttttccaataagggtaaacttgataaaacaataacaaattcac 8955984  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8955985 taaaacatcaaaagttttgtaatatagttgaagttctaaaacatcaaaaaaaaaggaatggagggagta 8956053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 45590910 - 45590742
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    |||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||  |||||||    
T  45590910 tcattaaattcatatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaaaggtaaacttgataaaacaataatgaattcac 45590811  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45590810 taaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaatgaatggagggagta 45590742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 34334500 - 34334342
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| ||||||||    
T  34334500 tcattaaattcacatgtgataaaccaaagatcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaagacaataataaattcac 34334401  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaat 159  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34334400 taaagcatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaat 34334342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 33288514 - 33288682
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||  ||| |||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  33288514 tcattaaattcacatgtgataaaccaaatgtcacaactactttatcagtatattgtgttttccaacatgggtaaacttgagaaaacaataataaattcac 33288613  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||    
T  33288614 taaaacatcaaaagttttggaatataattgaagttctaaaatatcaaaagaaaagaaatggagggagta 33288682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 18835875 - 18835704
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaat--tc 98  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||||| | ||||| |||| ||||||||||||||| | ||  ||    
T  18835875 tcattaaattcacatgtgataaatcaaatgtcacaactactttaatagtttatgatgttttctaacaaggataaatttgagaaaacaataatatatattc 18835776  T
Q  99 actaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  18835775 actaaaacatcgaaagttttggaatatagttgaagttctaaaacatcaaaagaaaataaatgaagggagtac 18835704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 49162245 - 49162108
Alignment:
Q  25 caaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaata 124  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  49162245 caaaggttacaactactttaatagtttatggtgttttccaacaagg-taaaattgagaaaacaataataaattcactaaaacatcaaaaattttggaata 49162147  T
Q  125 tagttgaagttctaaaacatcaaaagaaaaggaatggag 163  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  49162146 tagttgaagttctgaaacatcaaaagaaaatgaatggag 49162108  T

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Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 50774167 - 50774325
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    |||||||||| |||| ||||||| |||| ||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  50774167 tcattaaatttacatgtgataaaccaaaagtcacgactaatttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcac 50774266  T
Q  101 taaaa-----catcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||      ||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  50774267 taaaatactgtatcaaaagttttgaaatatagttaaagttctaaaacatcaaaaaaaaa 50774325  T

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Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 30469353 - 30469445
Alignment:
Q  77 ttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30469353 ttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgaagggagta 30469445  T

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Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 39482002 - 39481906
Alignment:
Q  70 ggtaaacttgagaaaacaataacaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  39482002 ggtaaacctgagaaaacaataataaatttactaaaacatcaaaagttttggaaaatagttgaagttctaaaacatcaaaagaaaagaaatggaggga 39481906  T

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Target: chr4; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36971216 - 36971115
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||||    
T  36971216 tcattaaattcacatgtgataaaccaaaggtcacaactattttaatagtttattgtgttttccaacaa-ggtaaacttcagaaaacaataataaattcac 36971118  T
Q  101 taa 103  Q
    |||    
T  36971117 taa 36971115  T

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Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 19256255 - 19256186
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  19256255 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagggagta 19256186  T

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Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 26025639 - 26025784
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcacta 102  Q
    ||||||||||||| ||||||  ||||||||||||||| ||| || ||     ||||||| || |||||||||||||| ||||| ||||  ||||  ||||    
T  26025639 attaaattcacatgtgataagccaaaggtcacaactagttttatggt-----gtgtttttcaacaagggtaaacttgggaaaa-aatattaaatatacta 26025732  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||  |||||  |||||||||||||||||||| |||||||||||||||||||    
T  26025733 aaatgtcaaatattttggaatatagttgaagtcctaaaacatcaaaagaaaa 26025784  T

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Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 36016329 - 36016279
Alignment:
Q  119 ggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36016329 ggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 36016279  T

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Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 36968407 - 36968353
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36968407 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaaaaaaa 36968353  T

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Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 33109009 - 33109163
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataacaaattca 99  Q
    |||||||| |||| | ||||  ||||||||||||||  ||||||||||| ||  ||||||||  | ||||| ||||||| |||||| ||||  ||||  |    
T  33109009 attaaatttacatgtaataagacaaaggtcacaactcatttaatagttttatggtgtgttttttaacaaggataaacttaagaaaaaaatattaaatata 33109108  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    ||||||||||||   ||||  |||||||||||||| ||||||||| |||||||||    
T  33109109 ctaaaacatcaattattttaaaatatagttgaagtcctaaaacattaaaagaaaa 33109163  T

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Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 19257103 - 19257137
Alignment:
Q  135 tctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||    
T  19257103 tctaaaacatcaaaagaaaaggaatggagggagta 19257137  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 166
Target Start/End: Complemental strand, 8955809 - 8955779
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||||||||||||||||||||    
T  8955809 ctaaaacatcaaaagaaaaggaatggaggga 8955779  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 45590986 - 45591019
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  45590986 ctaaaacatcaaaagaaaatgaatggagggagta 45591019  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 49162332 - 49162365
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| |||||||||||||||    
T  49162332 ctaaaacatcaaaagaaagggaatggagggagta 49162365  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 39482106 - 39482138
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagt 168  Q
    |||||||||||||||||||| ||||||||||||    
T  39482106 ctaaaacatcaaaagaaaagaaatggagggagt 39482138  T

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Target: scaffold0103 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 44788 - 44619
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataacaaattcac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  44788 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcac 44689  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatca-aaagaaaaggaatggagggagta 169  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||    
T  44688 taaaacctcaaaagttttggaatatagttgaagttctcaaacatcagaaagaaaaggaatgaagggagta 44619  T

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