View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20508_low_9 (Length: 206)

Name: NF20508_low_9
Description: NF20508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20508_low_9
NF20508_low_9
[»] chr7 (60 HSPs)
chr7 (1-206)||(9509442-9509648)
chr7 (1-203)||(12699088-12699291)
chr7 (1-200)||(38227739-38227939)
chr7 (1-200)||(3564026-3564226)
chr7 (1-191)||(15143699-15143890)
chr7 (1-191)||(16385920-16386100)
chr7 (1-206)||(40443642-40443836)
chr7 (1-206)||(27847506-27847701)
chr7 (1-149)||(44116816-44116963)
chr7 (1-150)||(17061622-17061771)
chr7 (1-200)||(26212255-26212444)
chr7 (1-145)||(28504963-28505106)
chr7 (1-141)||(39267308-39267447)
chr7 (1-145)||(18302494-18302637)
chr7 (1-145)||(9751212-9751355)
chr7 (1-146)||(12756379-12756523)
chr7 (111-206)||(10589291-10589386)
chr7 (1-141)||(15754549-15754689)
chr7 (1-145)||(2831968-2832110)
chr7 (1-145)||(44014489-44014633)
chr7 (1-145)||(34201099-34201242)
chr7 (1-146)||(810791-810936)
chr7 (2-146)||(12255454-12255598)
chr7 (1-153)||(22073223-22073375)
chr7 (1-49)||(11995720-11995768)
chr7 (1-49)||(47832219-47832267)
chr7 (10-172)||(16056616-16056778)
chr7 (1-146)||(16219378-16219523)
chr7 (10-74)||(16324392-16324456)
chr7 (1-49)||(18006052-18006100)
chr7 (1-74)||(68132-68205)
chr7 (2-71)||(2279781-2279850)
chr7 (1-44)||(2529639-2529682)
chr7 (106-145)||(9389462-9389501)
chr7 (11-58)||(11238655-11238702)
chr7 (106-145)||(11995796-11995835)
chr7 (110-145)||(12718966-12719001)
chr7 (110-145)||(12723877-12723912)
chr7 (11-70)||(14953560-14953619)
chr7 (11-70)||(14959526-14959585)
chr7 (110-145)||(16906974-16907009)
chr7 (110-145)||(18279701-18279736)
chr7 (110-145)||(18283664-18283699)
chr7 (11-70)||(26420340-26420399)
chr7 (11-70)||(44408043-44408102)
chr7 (107-145)||(68061-68099)
chr7 (2-44)||(9177252-9177294)
chr7 (2-44)||(11768526-11768568)
chr7 (5-74)||(9389361-9389430)
chr7 (13-70)||(11547953-11548010)
chr7 (13-70)||(11554549-11554606)
chr7 (3-44)||(14045240-14045281)
chr7 (3-44)||(14355270-14355311)
chr7 (2-43)||(15008107-15008148)
chr7 (96-145)||(16438794-16438843)
chr7 (96-145)||(17137822-17137871)
chr7 (1-74)||(21064824-21064897)
chr7 (6-58)||(14655095-14655147)
chr7 (5-69)||(20702669-20702733)
chr7 (5-69)||(32768038-32768102)
[»] chr2 (38 HSPs)
chr2 (1-206)||(32451591-32451797)
chr2 (1-206)||(27753828-27754034)
chr2 (1-200)||(298477-298676)
chr2 (1-205)||(22737842-22738047)
chr2 (1-206)||(23076695-23076899)
chr2 (1-177)||(23660305-23660481)
chr2 (1-191)||(22730895-22731086)
chr2 (1-206)||(22337368-22337574)
chr2 (1-191)||(23286129-23286309)
chr2 (1-206)||(37789-37984)
chr2 (1-206)||(20309358-20309553)
chr2 (1-145)||(23071625-23071768)
chr2 (1-206)||(23654072-23654254)
chr2 (1-144)||(22133879-22134020)
chr2 (3-142)||(28406297-28406436)
chr2 (1-62)||(28291964-28292025)
chr2 (1-74)||(25176228-25176301)
chr2 (107-145)||(22740730-22740768)
chr2 (2-48)||(39827602-39827648)
chr2 (110-145)||(12901286-12901321)
chr2 (11-58)||(23171413-23171460)
chr2 (11-58)||(23582670-23582717)
chr2 (11-70)||(24503473-24503532)
chr2 (110-145)||(24628252-24628287)
chr2 (110-145)||(24649654-24649689)
chr2 (110-145)||(27379206-27379241)
chr2 (110-145)||(27383252-27383287)
chr2 (110-145)||(27602094-27602129)
chr2 (110-145)||(41530783-41530818)
chr2 (11-69)||(12829434-12829492)
chr2 (2-44)||(23005221-23005263)
chr2 (2-44)||(23207770-23207812)
chr2 (2-44)||(34137412-34137454)
chr2 (96-145)||(22460950-22460999)
chr2 (104-153)||(23708383-23708432)
chr2 (103-144)||(25176158-25176199)
chr2 (109-145)||(31756232-31756268)
chr2 (8-56)||(37318652-37318700)
[»] chr8 (51 HSPs)
chr8 (1-206)||(18818072-18818277)
chr8 (1-206)||(18878899-18879105)
chr8 (1-204)||(20536463-20536667)
chr8 (1-191)||(23406649-23406840)
chr8 (1-191)||(21923590-21923781)
chr8 (1-206)||(22626988-22627194)
chr8 (1-206)||(28648706-28648912)
chr8 (1-172)||(6759544-6759716)
chr8 (1-206)||(21918672-21918868)
chr8 (1-150)||(41598494-41598643)
chr8 (1-206)||(23648806-23649012)
chr8 (1-172)||(22875353-22875524)
chr8 (1-181)||(16092003-16092184)
chr8 (1-206)||(31971508-31971703)
chr8 (5-206)||(16199324-16199514)
chr8 (1-124)||(7373084-7373208)
chr8 (1-206)||(25362813-25363008)
chr8 (1-145)||(5865939-5866082)
chr8 (1-145)||(21249697-21249840)
chr8 (1-145)||(17141229-17141372)
chr8 (1-145)||(21255535-21255678)
chr8 (1-145)||(21491308-21491451)
chr8 (10-144)||(21674021-21674155)
chr8 (1-74)||(45130693-45130766)
chr8 (133-206)||(45130793-45130866)
chr8 (1-145)||(26355360-26355504)
chr8 (1-145)||(39834147-39834291)
chr8 (141-206)||(7373023-7373088)
chr8 (1-49)||(38854913-38854961)
chr8 (1-74)||(19801089-19801162)
chr8 (1-71)||(6520757-6520827)
chr8 (2-44)||(20499076-20499118)
chr8 (10-47)||(23760511-23760548)
chr8 (1-72)||(13507671-13507742)
chr8 (1-72)||(13597203-13597274)
chr8 (11-70)||(20527812-20527871)
chr8 (1-68)||(21414889-21414956)
chr8 (110-145)||(43252110-43252145)
chr8 (10-44)||(17085770-17085804)
chr8 (2-44)||(17266579-17266621)
chr8 (11-69)||(18865695-18865753)
chr8 (2-44)||(37116840-37116882)
chr8 (96-145)||(15538745-15538794)
chr8 (96-145)||(24433997-24434046)
chr8 (6-58)||(19111601-19111653)
chr8 (6-58)||(19117892-19117944)
chr8 (105-145)||(21972353-21972393)
chr8 (105-145)||(21976438-21976478)
chr8 (5-69)||(29123449-29123513)
chr8 (105-145)||(37116664-37116704)
chr8 (104-144)||(38855015-38855055)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-206)||(20656-20862)
[»] scaffold0021 (4 HSPs)
scaffold0021 (1-206)||(124838-125041)
scaffold0021 (1-89)||(62932-63020)
scaffold0021 (105-146)||(136132-136173)
scaffold0021 (105-146)||(144840-144881)
[»] chr3 (83 HSPs)
chr3 (9-206)||(13442527-13442725)
chr3 (1-206)||(17488109-17488316)
chr3 (1-191)||(26687155-26687346)
chr3 (2-206)||(40213384-40213589)
chr3 (1-206)||(17499591-17499798)
chr3 (1-206)||(25476047-25476253)
chr3 (1-200)||(18438793-18438993)
chr3 (1-206)||(20698109-20698304)
chr3 (1-206)||(11424425-11424631)
chr3 (1-153)||(17247948-17248100)
chr3 (1-206)||(14572841-14573047)
chr3 (1-181)||(14973132-14973313)
chr3 (1-206)||(14576495-14576701)
chr3 (1-200)||(23083023-23083223)
chr3 (64-206)||(43841185-43841328)
chr3 (1-145)||(12340068-12340211)
chr3 (1-146)||(53070361-53070505)
chr3 (1-200)||(12399468-12399654)
chr3 (1-206)||(30030092-30030287)
chr3 (2-145)||(12852027-12852169)
chr3 (1-146)||(12933972-12934117)
chr3 (12-145)||(14665921-14666053)
chr3 (12-145)||(14669076-14669208)
chr3 (12-145)||(14735434-14735566)
chr3 (1-146)||(32307983-32308127)
chr3 (1-141)||(9513228-9513369)
chr3 (1-141)||(9521203-9521344)
chr3 (1-146)||(49667746-49667890)
chr3 (1-142)||(49389306-49389446)
chr3 (1-145)||(13209990-13210133)
chr3 (1-94)||(4588477-4588569)
chr3 (1-90)||(14179693-14179781)
chr3 (1-145)||(16097645-16097789)
chr3 (5-146)||(1644349-1644489)
chr3 (1-62)||(43842576-43842637)
chr3 (2-146)||(324549-324693)
chr3 (1-55)||(17247182-17247236)
chr3 (1-146)||(16104095-16104239)
chr3 (1-49)||(12171779-12171827)
chr3 (131-191)||(16796815-16796875)
chr3 (1-135)||(16809724-16809844)
chr3 (1-142)||(14234809-14234949)
chr3 (1-145)||(1465071-1465215)
chr3 (1-49)||(2050863-2050911)
chr3 (2-74)||(52523390-52523462)
chr3 (2-44)||(22109938-22109980)
chr3 (13-146)||(42386725-42386858)
chr3 (1-74)||(15471310-15471383)
chr3 (96-145)||(19725671-19725720)
chr3 (2-43)||(43927597-43927638)
chr3 (11-70)||(839609-839668)
chr3 (110-145)||(7109999-7110034)
chr3 (110-145)||(7113934-7113969)
chr3 (1-44)||(14501615-14501658)
chr3 (110-145)||(22321965-22322000)
chr3 (110-145)||(22337020-22337055)
chr3 (1-44)||(23275157-23275200)
chr3 (11-70)||(24188140-24188199)
chr3 (110-145)||(27409417-27409452)
chr3 (11-70)||(55149341-55149400)
chr3 (2-44)||(316612-316654)
chr3 (11-69)||(22643022-22643080)
chr3 (11-57)||(41092030-41092076)
chr3 (2-44)||(45797659-45797701)
chr3 (96-145)||(1598240-1598289)
chr3 (96-145)||(3833971-3834020)
chr3 (11-56)||(4291149-4291194)
chr3 (5-58)||(13251095-13251148)
chr3 (5-58)||(13257741-13257794)
chr3 (96-145)||(17242269-17242318)
chr3 (11-56)||(17710275-17710320)
chr3 (105-146)||(37250932-37250973)
chr3 (96-145)||(38814681-38814730)
chr3 (104-144)||(12171869-12171909)
chr3 (93-145)||(15482959-15483011)
chr3 (5-69)||(15691955-15692019)
chr3 (105-145)||(22110116-22110156)
chr3 (5-69)||(23704446-23704510)
chr3 (5-69)||(23722902-23722966)
chr3 (5-69)||(23741358-23741422)
chr3 (5-69)||(41201475-41201539)
chr3 (6-58)||(53380030-53380082)
chr3 (6-58)||(53386682-53386734)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-206)||(51546-51752)
scaffold0034 (2-170)||(32826-32994)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-206)||(52166-52371)
scaffold0011 (1-206)||(167652-167847)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-206)||(13345-13551)
scaffold0175 (1-144)||(34437-34579)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-206)||(39013-39218)
[»] chr4 (60 HSPs)
chr4 (1-206)||(44053082-44053288)
chr4 (1-205)||(22636688-22636893)
chr4 (1-189)||(7798967-7799156)
chr4 (1-199)||(14038908-14039108)
chr4 (1-206)||(3096896-3097091)
chr4 (2-198)||(15091157-15091355)
chr4 (1-191)||(16377184-16377375)
chr4 (1-206)||(7089130-7089325)
chr4 (1-206)||(14052975-14053170)
chr4 (1-191)||(12903025-12903204)
chr4 (1-153)||(44928585-44928737)
chr4 (1-206)||(17047746-17047940)
chr4 (1-150)||(44102520-44102668)
chr4 (1-145)||(15552129-15552272)
chr4 (1-145)||(24029057-24029200)
chr4 (1-116)||(16239654-16239769)
chr4 (1-109)||(6190783-6190892)
chr4 (1-145)||(13812471-13812614)
chr4 (104-200)||(23374125-23374221)
chr4 (1-143)||(16596963-16597104)
chr4 (2-145)||(22633876-22634018)
chr4 (1-145)||(20156952-20157095)
chr4 (84-191)||(7893968-7894077)
chr4 (1-145)||(8846689-8846834)
chr4 (1-146)||(21814965-21815109)
chr4 (1-146)||(21815294-21815438)
chr4 (1-146)||(21818387-21818531)
chr4 (1-146)||(12774313-12774457)
chr4 (133-206)||(16239764-16239838)
chr4 (1-145)||(15099665-15099809)
chr4 (139-206)||(6190715-6190782)
chr4 (11-58)||(17046718-17046765)
chr4 (1-144)||(39705950-39706092)
chr4 (58-145)||(3332201-3332287)
chr4 (2-146)||(52242856-52243000)
chr4 (2-200)||(15464592-15464792)
chr4 (1-74)||(43198250-43198323)
chr4 (11-70)||(14685534-14685593)
chr4 (1-48)||(15190729-15190776)
chr4 (1-48)||(15868297-15868344)
chr4 (1-49)||(13844950-13844998)
chr4 (6-70)||(14679325-14679389)
chr4 (110-145)||(4561107-4561142)
chr4 (110-145)||(5756711-5756746)
chr4 (11-70)||(23838796-23838855)
chr4 (110-145)||(33742675-33742710)
chr4 (2-44)||(13436-13478)
chr4 (11-69)||(386038-386096)
chr4 (11-69)||(7900855-7900913)
chr4 (11-69)||(15321778-15321836)
chr4 (2-44)||(32306582-32306624)
chr4 (1-43)||(32851868-32851910)
chr4 (11-69)||(51493502-51493560)
chr4 (12-57)||(12522460-12522505)
chr4 (11-56)||(16956334-16956379)
chr4 (96-145)||(19757361-19757410)
chr4 (96-145)||(19782396-19782445)
chr4 (5-70)||(40471837-40471902)
chr4 (96-145)||(45938444-45938493)
chr4 (5-69)||(40478511-40478575)
[»] scaffold0292 (2 HSPs)
scaffold0292 (2-205)||(3724-3928)
scaffold0292 (1-191)||(610-801)
[»] chr1 (44 HSPs)
chr1 (1-206)||(50209875-50210081)
chr1 (1-200)||(34510039-34510239)
chr1 (1-191)||(22532537-22532728)
chr1 (1-205)||(22354234-22354439)
chr1 (1-200)||(20846892-20847081)
chr1 (1-153)||(433314-433466)
chr1 (1-200)||(21026939-21027128)
chr1 (1-206)||(27250402-27250597)
chr1 (1-190)||(20135456-20135646)
chr1 (1-206)||(22355847-22356042)
chr1 (1-206)||(22357533-22357728)
chr1 (2-190)||(38801065-38801243)
chr1 (1-168)||(33681301-33681468)
chr1 (1-145)||(20918917-20919060)
chr1 (1-146)||(21754350-21754494)
chr1 (1-144)||(52927643-52927786)
chr1 (1-145)||(20091136-20091281)
chr1 (3-145)||(20248592-20248734)
chr1 (1-144)||(22237946-22238088)
chr1 (1-144)||(22921529-22921672)
chr1 (1-46)||(21301200-21301245)
chr1 (1-71)||(21162117-21162187)
chr1 (5-145)||(28194114-28194254)
chr1 (2-75)||(16367873-16367946)
chr1 (104-145)||(20637165-20637206)
chr1 (104-145)||(21162080-21162121)
chr1 (1-74)||(43697746-43697819)
chr1 (110-145)||(16375231-16375266)
chr1 (11-70)||(20524899-20524958)
chr1 (110-145)||(21407653-21407688)
chr1 (11-70)||(21438157-21438216)
chr1 (11-70)||(23763574-23763633)
chr1 (5-72)||(35981352-35981419)
chr1 (110-145)||(52639839-52639874)
chr1 (2-48)||(16381652-16381698)
chr1 (11-57)||(19063896-19063942)
chr1 (11-57)||(19111786-19111832)
chr1 (2-48)||(21895895-21895941)
chr1 (2-44)||(35260718-35260760)
chr1 (2-44)||(52940464-52940506)
chr1 (96-145)||(12647166-12647215)
chr1 (105-146)||(26065254-26065295)
chr1 (104-145)||(35981451-35981492)
chr1 (105-145)||(45310135-45310175)
[»] scaffold0121 (1 HSPs)
scaffold0121 (5-206)||(8198-8400)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-206)||(23964-24169)
scaffold0042 (96-145)||(64150-64199)
[»] scaffold0016 (3 HSPs)
scaffold0016 (1-206)||(2104-2310)
scaffold0016 (1-145)||(207181-207324)
scaffold0016 (2-43)||(119214-119255)
[»] chr5 (63 HSPs)
chr5 (1-206)||(23390158-23390364)
chr5 (1-191)||(24529488-24529680)
chr5 (1-206)||(21985809-21986015)
chr5 (6-200)||(9078211-9078406)
chr5 (1-191)||(13095762-13095953)
chr5 (1-206)||(24493821-24494027)
chr5 (1-200)||(1096726-1096926)
chr5 (1-191)||(13025578-13025769)
chr5 (1-202)||(21292643-21292834)
chr5 (1-206)||(25421785-25421991)
chr5 (1-206)||(25431647-25431853)
chr5 (1-206)||(8286515-8286710)
chr5 (1-200)||(22075278-22075467)
chr5 (1-152)||(11580907-11581058)
chr5 (1-150)||(36154490-36154639)
chr5 (1-145)||(22119855-22119998)
chr5 (2-206)||(22107047-22107241)
chr5 (1-145)||(21871233-21871377)
chr5 (1-145)||(21875513-21875657)
chr5 (1-145)||(24766999-24767142)
chr5 (1-145)||(19660499-19660643)
chr5 (1-141)||(21565863-21566003)
chr5 (1-145)||(22959195-22959339)
chr5 (1-140)||(19669219-19669359)
chr5 (2-146)||(22144364-22144508)
chr5 (1-145)||(5888837-5888981)
chr5 (1-144)||(21329157-21329300)
chr5 (5-74)||(21498683-21498752)
chr5 (2-44)||(20026526-20026568)
chr5 (104-153)||(21501919-21501968)
chr5 (106-146)||(20026706-20026746)
chr5 (5-69)||(41294112-41294176)
chr5 (110-145)||(19472493-19472528)
chr5 (11-58)||(19992258-19992305)
chr5 (110-145)||(20296145-20296180)
chr5 (11-70)||(21294947-21295006)
chr5 (11-58)||(22334501-22334548)
chr5 (106-145)||(31342414-31342453)
chr5 (11-57)||(15441638-15441684)
chr5 (11-69)||(25406789-25406847)
chr5 (12-70)||(25535351-25535409)
chr5 (107-145)||(25744036-25744074)
chr5 (2-44)||(26732421-26732463)
chr5 (2-44)||(26740234-26740276)
chr5 (12-57)||(14359504-14359549)
chr5 (96-145)||(20232847-20232896)
chr5 (96-145)||(21340527-21340576)
chr5 (104-141)||(21741308-21741345)
chr5 (3-44)||(22177807-22177848)
chr5 (11-68)||(22588459-22588516)
chr5 (100-145)||(23201680-23201725)
chr5 (12-57)||(23336973-23337018)
chr5 (100-145)||(23535353-23535398)
chr5 (96-145)||(24532808-24532857)
chr5 (2-43)||(25574056-25574097)
chr5 (2-43)||(25575249-25575290)
chr5 (2-43)||(25576442-25576483)
chr5 (96-145)||(26665891-26665940)
chr5 (96-145)||(26937488-26937537)
chr5 (5-58)||(27517126-27517179)
chr5 (5-58)||(27523763-27523816)
chr5 (105-145)||(123074-123114)
chr5 (5-69)||(17284430-17284494)
[»] scaffold0026 (5 HSPs)
scaffold0026 (3-206)||(40109-40313)
scaffold0026 (23-130)||(26555-26662)
scaffold0026 (1-88)||(39593-39680)
scaffold0026 (15-145)||(59179-59308)
scaffold0026 (142-191)||(26163-26213)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-191)||(25727-25918)
scaffold0122 (1-181)||(33156-33338)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-206)||(16877-17083)
scaffold0056 (1-73)||(79024-79096)
[»] chr6 (55 HSPs)
chr6 (1-206)||(22779889-22780095)
chr6 (1-191)||(29060808-29060999)
chr6 (1-199)||(19303203-19303402)
chr6 (1-191)||(18409489-18409680)
chr6 (1-206)||(20637956-20638151)
chr6 (1-206)||(18821492-18821687)
chr6 (1-206)||(17287458-17287664)
chr6 (1-200)||(20360633-20360822)
chr6 (1-200)||(20594032-20594232)
chr6 (1-146)||(29808545-29808691)
chr6 (1-146)||(28496135-28496280)
chr6 (1-191)||(16920306-16920486)
chr6 (1-200)||(25629017-25629217)
chr6 (1-191)||(11185770-11185950)
chr6 (1-188)||(22831773-22831950)
chr6 (1-146)||(18457029-18457173)
chr6 (1-145)||(25611385-25611530)
chr6 (1-141)||(1561622-1561762)
chr6 (1-145)||(21939699-21939842)
chr6 (1-145)||(15894092-15894237)
chr6 (1-143)||(19652512-19652654)
chr6 (1-145)||(4667875-4668019)
chr6 (1-144)||(27332946-27333089)
chr6 (1-144)||(27393686-27393829)
chr6 (1-145)||(4185485-4185629)
chr6 (11-141)||(25603057-25603188)
chr6 (1-145)||(4189271-4189415)
chr6 (1-145)||(4674722-4674866)
chr6 (1-146)||(23019721-23019866)
chr6 (1-78)||(31155060-31155137)
chr6 (1-145)||(22334544-22334699)
chr6 (1-145)||(22080399-22080543)
chr6 (107-145)||(25641953-25641991)
chr6 (12-62)||(31164531-31164581)
chr6 (110-145)||(8244158-8244193)
chr6 (110-145)||(11567160-11567195)
chr6 (110-145)||(19870888-19870923)
chr6 (11-70)||(22331803-22331862)
chr6 (110-145)||(22863243-22863278)
chr6 (110-145)||(23395366-23395401)
chr6 (11-69)||(1538628-1538686)
chr6 (11-69)||(1544727-1544785)
chr6 (2-44)||(20109631-20109673)
chr6 (12-58)||(30694738-30694784)
chr6 (96-145)||(12496605-12496654)
chr6 (11-56)||(14099004-14099049)
chr6 (11-56)||(14472647-14472692)
chr6 (12-57)||(16372235-16372280)
chr6 (100-145)||(16924642-16924687)
chr6 (100-145)||(16929357-16929402)
chr6 (104-145)||(31155163-31155204)
chr6 (105-145)||(19668688-19668728)
chr6 (105-145)||(23657189-23657229)
chr6 (6-58)||(27327735-27327787)
chr6 (6-58)||(27388475-27388527)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-206)||(5783-5989)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-206)||(8728-8934)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-191)||(339613-339803)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-206)||(722-917)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-206)||(10099-10294)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-200)||(163-363)
[»] scaffold0114 (1 HSPs)
scaffold0114 (3-206)||(15140-15333)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-203)||(13467-13659)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-206)||(725-920)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-206)||(40165-40370)
scaffold0080 (96-145)||(18415-18464)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-206)||(23135-23341)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-200)||(16261-16462)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-206)||(13748-13943)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-159)||(4808-4967)
scaffold0228 (1-159)||(12390-12549)
scaffold0228 (1-159)||(22342-22501)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-206)||(32317-32512)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-163)||(675-837)
[»] scaffold0120 (3 HSPs)
scaffold0120 (8-206)||(16340-16539)
scaffold0120 (1-181)||(32621-32802)
scaffold0120 (1-181)||(46203-46384)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-153)||(1740-1891)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-206)||(11186-11381)
scaffold0235 (1-44)||(14055-14098)
[»] scaffold0032 (1 HSPs)
scaffold0032 (5-205)||(51833-52023)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-146)||(20426-20571)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-206)||(2205-2400)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-206)||(6863-7058)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-150)||(15277-15426)
[»] scaffold0142 (2 HSPs)
scaffold0142 (1-150)||(17090-17239)
scaffold0142 (39-145)||(7471-7576)
[»] scaffold0352 (2 HSPs)
scaffold0352 (1-124)||(17670-17794)
scaffold0352 (148-205)||(17797-17854)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-206)||(4804-4999)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-200)||(5108-5296)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-203)||(191-384)
scaffold0358 (1-203)||(4967-5160)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-191)||(16547-16727)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-206)||(1167-1362)
[»] scaffold0165 (3 HSPs)
scaffold0165 (1-206)||(3734-3929)
scaffold0165 (1-206)||(7798-7993)
scaffold0165 (2-44)||(27305-27347)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-206)||(47239-47434)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-145)||(2107-2250)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-93)||(18620-18712)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-142)||(12471-12611)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-191)||(624-816)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-145)||(7956-8099)
scaffold0075 (2-44)||(53134-53176)
[»] scaffold0037 (1 HSPs)
scaffold0037 (12-145)||(80005-80137)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-146)||(132967-133112)
scaffold0028 (110-145)||(58492-58527)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-141)||(28942-29081)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-145)||(10226-10369)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-145)||(9496-9639)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-153)||(19573-19725)
[»] scaffold1984 (1 HSPs)
scaffold1984 (10-153)||(437-580)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-145)||(24313-24456)
[»] scaffold0106 (2 HSPs)
scaffold0106 (2-206)||(1539-1733)
scaffold0106 (2-206)||(7516-7710)
[»] scaffold0070 (2 HSPs)
scaffold0070 (1-200)||(4782-4982)
scaffold0070 (96-145)||(10200-10249)
[»] scaffold0347 (1 HSPs)
scaffold0347 (12-145)||(344-476)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-146)||(32397-32542)
[»] scaffold0141 (1 HSPs)
scaffold0141 (72-200)||(39735-39864)
[»] scaffold0049 (1 HSPs)
scaffold0049 (72-200)||(74948-75077)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-145)||(15974-16117)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-200)||(10422-10617)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-191)||(21179-21349)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-80)||(2747-2826)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-146)||(2465-2609)
[»] scaffold0130 (2 HSPs)
scaffold0130 (67-169)||(28121-28223)
scaffold0130 (1-72)||(28924-28995)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-146)||(28471-28616)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-145)||(7126-7270)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-146)||(12243-12387)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-142)||(20088-20228)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-145)||(9391-9535)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-146)||(101709-101853)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-145)||(45451-45596)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-71)||(13270-13340)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-146)||(1963-2108)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-62)||(10542-10603)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-145)||(161000-161144)
scaffold0001 (2-44)||(446965-447007)
scaffold0001 (2-44)||(497896-497938)
[»] scaffold0247 (2 HSPs)
scaffold0247 (105-169)||(6561-6625)
scaffold0247 (1-68)||(6490-6557)
[»] scaffold0555 (3 HSPs)
scaffold0555 (1-141)||(897-1038)
scaffold0555 (1-49)||(10230-10278)
scaffold0555 (104-146)||(10305-10347)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-74)||(3318-3391)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-146)||(10842-10987)
[»] scaffold0138 (3 HSPs)
scaffold0138 (1-145)||(13255-13399)
scaffold0138 (12-70)||(29892-29950)
scaffold0138 (12-70)||(41888-41946)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-73)||(2306-2378)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-145)||(43446-43590)
scaffold0116 (1-74)||(47366-47439)
[»] scaffold0010 (4 HSPs)
scaffold0010 (5-145)||(130222-130362)
scaffold0010 (2-44)||(60301-60343)
scaffold0010 (105-146)||(60479-60520)
scaffold0010 (11-56)||(242434-242479)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-55)||(690-744)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-146)||(7719-7864)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-74)||(5979-6052)
[»] scaffold0320 (1 HSPs)
scaffold0320 (2-74)||(12381-12453)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-145)||(15492-15636)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-142)||(6931-7072)
scaffold0333 (1-142)||(14311-14452)
[»] scaffold0621 (1 HSPs)
scaffold0621 (10-74)||(6923-6987)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-37)||(10934-10970)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-69)||(5784-5852)
[»] scaffold0012 (1 HSPs)
scaffold0012 (10-74)||(227878-227942)
[»] scaffold0022 (2 HSPs)
scaffold0022 (2-44)||(80754-80796)
scaffold0022 (105-145)||(128735-128775)
[»] scaffold0586 (1 HSPs)
scaffold0586 (1-68)||(2245-2312)
[»] scaffold0372 (1 HSPs)
scaffold0372 (110-145)||(4875-4910)
[»] scaffold0029 (3 HSPs)
scaffold0029 (110-145)||(61386-61421)
scaffold0029 (11-69)||(125797-125855)
scaffold0029 (112-145)||(65304-65337)
[»] scaffold0004 (2 HSPs)
scaffold0004 (11-70)||(58102-58161)
scaffold0004 (2-48)||(332804-332850)
[»] scaffold0525 (1 HSPs)
scaffold0525 (11-69)||(3560-3618)
[»] scaffold0259 (1 HSPs)
scaffold0259 (11-57)||(10553-10599)
[»] scaffold0233 (1 HSPs)
scaffold0233 (11-57)||(14224-14270)
[»] scaffold0123 (1 HSPs)
scaffold0123 (2-44)||(25598-25640)
[»] scaffold0109 (1 HSPs)
scaffold0109 (11-69)||(27006-27064)
[»] scaffold0077 (1 HSPs)
scaffold0077 (2-44)||(55271-55313)
[»] scaffold0013 (1 HSPs)
scaffold0013 (11-57)||(9716-9762)
[»] scaffold0210 (2 HSPs)
scaffold0210 (96-145)||(21565-21614)
scaffold0210 (96-145)||(29457-29506)
[»] scaffold0156 (1 HSPs)
scaffold0156 (12-57)||(3148-3193)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-74)||(24182-24255)
[»] scaffold0184 (1 HSPs)
scaffold0184 (105-145)||(3993-4033)
[»] scaffold0044 (1 HSPs)
scaffold0044 (110-146)||(62556-62592)
[»] scaffold0017 (1 HSPs)
scaffold0017 (110-146)||(192757-192793)
[»] scaffold0005 (1 HSPs)
scaffold0005 (5-69)||(307460-307524)


Alignment Details
Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 9509648 - 9509442
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||    
T  9509648 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 9509549  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||    
T  9509548 tctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcaagagttg 9509449  T
Q  200 tcgagag 206  Q
    |||||||    
T  9509448 tcgagag 9509442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 12699291 - 12699088
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||  ||| ||    
T  12699291 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgttgaatgaaactcgtgggat 12699192  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| | |||||    
T  12699191 tctgacctgaactcgccacggcgagcagaggctctcacctcgtgagtgacccagaaacaaagtgacttgttaggttttgcgacctttgttgcacgagttg 12699092  T
Q  200 tcga 203  Q
    ||||    
T  12699091 tcga 12699088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 38227939 - 38227739
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactttt-ggat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||    
T  38227939 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatt-tagaatgaaactttttggat 38227841  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| | |||||||||||||||||| | ||||    
T  38227840 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgccttgttaggtttttgcgacctttgttgcacgagtt 38227741  T
Q  199 gt 200  Q
    ||    
T  38227740 gt 38227739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 3564026 - 3564226
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |     
T  3564026 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatg-aacttttggaaa 3564124  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||    
T  3564125 tctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 3564224  T
Q  199 gt 200  Q
    ||    
T  3564225 gt 3564226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 15143699 - 15143890
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||| ||||||| |||||||| |||    
T  15143699 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatg-aacttttgtgat 15143797  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  15143798 tctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgacctttgttgc 15143890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16385920 - 16386100
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           | |||||| ||| ||    
T  16385920 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggat 16386008  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16386009 tctaacctgaactcgccacggcgagcagtggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 16386100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 40443836 - 40443642
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||   ||         ||||| ||| ||    
T  40443836 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaa---tt---------aacttgtgggat 40443749  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | |||||    
T  40443748 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttattggattttgcgacctttgttgcacgagttg 40443649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 27847506 - 27847701
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||           | |||||| ||| ||    
T  27847506 cttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctggaa-----------ttaaacttatgggat 27847594  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||    
T  27847595 tttgacctgaactcgccacggcaagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttagattttgcgacctttgttgcacgagttg 27847694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 44116963 - 44116816
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||||||||| ||| |    
T  44116963 cttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaagatt-tagaatgaaactttgggaat 44116865  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgac 149  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44116864 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgac 44116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 17061622 - 17061771
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||| |||||||  || |    
T  17061622 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaactttgagaat 17061721  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 150  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  17061722 ctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacc 17061771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 26212444 - 26212255
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||| |||||||||||           |||||||| || | |    
T  26212444 cttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgaggt 26212356  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgacttgttagattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| | ||||    
T  26212355 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaacagagtgatttgttag-ttttgcgacctttgttgcacgagtt 26212257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 28504963 - 28505106
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||||| ||| | ||     
T  28504963 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaa 28505061  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  28505062 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 28505106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 39267308 - 39267447
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| | ||     
T  39267308 cttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaa 39267406  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcg 141  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  39267407 tctga-ctgaactcgccatggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 18302637 - 18302494
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat- 99  Q
    |||||||||  |||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||     
T  18302637 cttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaac-tttggata 18302540  T
Q  100 -tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
     ||||| |||||||||||| |||||||||||||||||||||||||||    
T  18302539 atctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 18302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 9751212 - 9751355
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||| | |||||||||||||| | ||     
T  9751212 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacctggaaagact-tagaatgaaactttggagaa 9751310  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    | ||| |||||||||||| || ||||||||||||||||||||||||    
T  9751311 tttga-ctgaactcgccatggtgagcagaggctctcgcctcgcgag 9751355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 12756379 - 12756523
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||   |||  ||||||||  |||||||      
T  12756379 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatt-atttaagaatgaactttttggaag 12756477  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||    
T  12756478 ctgacctgaactcaccatggcgagtagaggctctcgcctcgcgagt 12756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 10589386 - 10589291
Alignment:
Q  111 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagag 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| ||||    
T  10589386 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgaccttttttgcacgagttgtctagag 10589291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 15754549 - 15754689
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatg-aaacttttg-ga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| | | ||||||| ||||||||| ||    
T  15754549 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaact-tagaatgaaaacttttgaga 15754647  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcg 141  Q
     ||||||| ||||| ||||||||||||| ||||||||||||||    
T  15754648 atctgacc-gaacttgccacggcgagcataggctctcgcctcg 15754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 2831968 - 2832110
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| | ||||||| |||||| | ||     
T  2831968 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctagaaagact-tagaatg-aactttggagaa 2832065  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||    
T  2832066 tctga-ctgaactcaccatggcgagcagaggctctcgcctcgcgag 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 44014633 - 44014489
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||||||||| |||||||||  |||   | |    
T  44014633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgttagt 44014534  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
       |||||||||||||| || ||| ||||||||||||||||||||    
T  44014533 tgcacctgaactcgccatggtgagtagaggctctcgcctcgcgag 44014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 34201242 - 34201099
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||||||||||| ||||||||||||||||||||| | |||||||| ||| |||||| |||||||| ||||| | |||||||||| ||| | ||     
T  34201242 cttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacctgtaaagact-tagaatgaaaatttggagaa 34201144  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||    
T  34201143 tctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 34201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 810791 - 810936
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttt-tggat 99  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| || || || ||| |||||||||||||| | |||||||||  ||| || |     
T  810791 cttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatttagaatgaatttttgtgaac 810890  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    | | |||||||||||||| |||||| |||||||||||||||||||||    
T  810891 tgt-acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 12255454 - 12255598
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattc 101  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||| | |||  ||||| |||||||||||   ||  ||||||||  ||| ||| |     
T  12255454 ttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatgaatttttgggagtt 12255553  T
Q  102 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
      ||||||||||||||  ||||| |||||||||||||||||||||    
T  12255554 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 12255598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 22073375 - 22073223
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||| | |||||||||||||||||||| ||||||||||||| ||||| | ||| |||||| ||||||| |||   ||  |||||| |  ||| ||| |    
T  22073375 cttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatggatttttgggagt 22073276  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 153  Q
       |||||||||||||| |||||| |||||| |||||||||||||| ||||||    
T  22073275 tacacctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccag 22073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11995720 - 11995768
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 49  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11995720 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47832267 - 47832219
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 49  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47832267 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 47832219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 16056778 - 16056616
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattctgacctga 109  Q
    ||||| || ||||||||||| ||||||||| ||||||||| | |||  ||||| |||||||||||   ||  |||||| |  ||| ||| |   ||||||    
T  16056778 ttttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaattacacctga 16056679  T
Q  110 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag 172  Q
    ||||||||  ||||| ||||||||||||||||||||| ||||||  ||||| || ||||||||    
T  16056678 actcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttag 16056616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 16219378 - 16219523
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||| || ||| ||| ||||||||||||||||||| | |||  ||||| |||||||||||   ||  ||||||||  ||| ||| |    
T  16219378 cttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagtttaagaatgaatttttgggagt 16219477  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
       || ||||||||||| |||||| |||||| ||||||||||||||    
T  16219478 tacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagt 16219523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 16324456 - 16324392
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||  ||||| |||||||||||    
T  16324456 ttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaa 16324392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18006100 - 18006052
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 49  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  18006100 cttagatgtttttgagtgcctgaacatgtctaataatgattatgaaaga 18006052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 68205 - 68132
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||| ||| ||| ||||||||||| |||||||||||||||||||||||| || ||  ||||| |||||||||||    
T  68205 cttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 68132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 2279781 - 2279850
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctg 71  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||| | |||  ||||| ||||||||    
T  2279781 ttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctg 2279850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2529639 - 2529682
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  2529639 cttagatgattttgagtgcctgaatatgtataataatgattagg 2529682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 9389462 - 9389501
Alignment:
Q  106 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  9389462 ctgaactcgccatggcgagtagaggctctcgcctcgcgag 9389501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 11238655 - 11238702
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  11238655 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 11238702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 11995796 - 11995835
Alignment:
Q  106 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  11995796 ctgaactcgccatggcaagcagaggctctcgcctcgcgag 11995835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 12719001 - 12718966
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12719001 actcgccacggcgagcagatgctctcgcctcgcgag 12718966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 12723912 - 12723877
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12723912 actcgccacggcgagcagatgctctcgcctcgcgag 12723877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 14953619 - 14953560
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  14953619 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 14959585 - 14959526
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  14959585 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14959526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 16906974 - 16907009
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16906974 actcgccacggcgagcagatgctctcgcctcgcgag 16907009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 18279736 - 18279701
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18279736 actcgccacggcgagcagatgctctcgcctcgcgag 18279701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 18283699 - 18283664
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18283699 actcgccacggcgagcagatgctctcgcctcgcgag 18283664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 26420399 - 26420340
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  26420399 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 26420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 44408043 - 44408102
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  44408043 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 44408102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 145
Target Start/End: Complemental strand, 68099 - 68061
Alignment:
Q  107 tgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  68099 tgaactcgccatggcgagtagaggctctcgcctcgcgag 68061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 9177252 - 9177294
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  9177252 ttagatgtttttgagtgcctgaacatgtataagaatgattagg 9177294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 11768526 - 11768568
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  11768526 ttagatgattttgagtgcctgaacatgtataagaatgattagg 11768568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 9389361 - 9389430
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||| ||||||||| ||| || ||| |||| |||||||||||||| |||||  ||||| |||||||||||    
T  9389361 gatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctggaa 9389430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 11547953 - 11548010
Alignment:
Q  13 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  11547953 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 11554549 - 11554606
Alignment:
Q  13 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  11554549 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11554606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 14045281 - 14045240
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||| ||||||||||||||| |||| ||||||||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattagg 14045240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 14355311 - 14355270
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||| ||||||||||||||| |||| ||||||||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattagg 14355270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 15008107 - 15008148
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| || ||||||||||||||||| |||||||||||||    
T  15008107 ttagatgattctgagtgcctgaacatgtataataatgattag 15008148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 16438794 - 16438843
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  16438794 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 16438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 17137822 - 17137871
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  17137822 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 17137871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21064824 - 21064897
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||| || |||| ||||||||||||  |||||||||||||||| | | ||| |||||| ||||| |||||    
T  21064824 cttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaacttggaa 21064897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 14655095 - 14655147
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  14655095 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 14655147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 20702669 - 20702733
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  20702669 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 20702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 32768102 - 32768038
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  32768102 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 32768038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 5e-92; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 32451591 - 32451797
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||    
T  32451591 cttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattgtagaatgaaacttgtgggat 32451690  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  32451691 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttg 32451790  T
Q  200 tcgagag 206  Q
    |||||||    
T  32451791 tcgagag 32451797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 27754034 - 27753828
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||    
T  27754034 cttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 27753935  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| | |||||    
T  27753934 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttagattttgcgaccttcgttgcacgagttg 27753835  T
Q  200 tcgagag 206  Q
    |||||||    
T  27753834 tcgagag 27753828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 298477 - 298676
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| ||| ||    
T  298477 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaaagatt-tagaatgaaacttgtgggat 298575  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  298576 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttg 298675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22737842 - 22738047
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||    
T  22737842 cttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacctagaaagattgtagaatgaaacttgtgggat 22737941  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| | |||||    
T  22737942 tctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggttttgcgacctttgttgcacgagttg 22738041  T
Q  200 tcgaga 205  Q
    | ||||    
T  22738042 ttgaga 22738047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 23076899 - 23076695
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||| |||||||||||||| | |||    
T  23076899 cttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaaagatt-tagaatgaaactttggaatt 23076801  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgt 200  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| | ||||||    
T  23076800 ctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttaggttttgcgacctttgttgcacgagttgt 23076701  T
Q  201 cgagag 206  Q
     |||||    
T  23076700 tgagag 23076695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 23660481 - 23660305
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||| |    
T  23660481 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttttggaat 23660382  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagatttt 177  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  23660381 ctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgttaggtttt 23660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 22730895 - 22731086
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  22730895 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 22730994  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||| |||||||| |||||||| |||||||||    
T  22730995 tctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaacagagtgccttgttaggttttgcgatctttgttgc 22731086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 22337574 - 22337368
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |    
T  22337574 cttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt-tagaatgaaactttttgagt 22337476  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | ||||| |||||||||||| | ||||    
T  22337475 tctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgtgacctttgttgcacgagtt 22337376  T
Q  199 gtcgagag 206  Q
    || |||||    
T  22337375 gttgagag 22337368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 23286309 - 23286129
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||           ||||| || || |||    
T  23286309 cttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatggaa-----------tgaaaattgtgagat 23286221  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23286220 tatgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttagattttgcgacctttgttgc 23286129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 37789 - 37984
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||           | |||||| || |||    
T  37789 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctggaa-----------ttaaacttgtgagat 37877  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| | |||||    
T  37878 tctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacatagtgacttgttagactttgcgacctttgttgcacgagttg 37977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 20309553 - 20309358
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||           | |||||| ||| ||    
T  20309553 cttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggat 20309465  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | | |||    
T  20309464 tctgacctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgttagattttgcgacccttgttgcacgatttg 20309365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 23071625 - 23071768
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||||| ||| | ||     
T  23071625 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaa 23071723  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  23071724 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 23071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 23654072 - 23654254
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaact-tttggat 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||           |||| ||||| || ||||    
T  23654072 cttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaactgttgggat 23654160  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||| ||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  23654161 tctgacttgaactcgccacggcgagca-------------cgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttg 23654247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 22133879 - 22134020
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||| | |||| | |||||||||  |||||        
T  22133879 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttgtgaa 22133976  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
    |||| |||||||||||| ||||||||||||||||||||||||||    
T  22133977 ctgaactgaactcgccatggcgagcagaggctctcgcctcgcga 22134020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 28406436 - 28406297
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattct 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || || |||||| |||||||| ||||||| |||||| ||| |||||    ||    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaat-aaaattttgtgaact 28406338  T
Q  103 g-acctgaactcgccacggcgagcagaggctctcgcctcgc 142  Q
    | |||||||||||||| |||||| |||||||||||||||||    
T  28406337 gaacctgaactcgccatggcgagtagaggctctcgcctcgc 28406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28291964 - 28292025
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaga 62  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  28291964 cttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatgaga 28292025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25176301 - 25176228
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||  || ||  ||||| |||||||||||    
T  25176301 cttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctggaa 25176228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 145
Target Start/End: Original strand, 22740730 - 22740768
Alignment:
Q  107 tgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22740730 tgaactcgccacggcgagcagatgctctcgcctcgcgag 22740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 39827602 - 39827648
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 48  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  39827602 ttagatgattttgagtgcctgaatatgtataataatgattaggaaag 39827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 12901286 - 12901321
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12901286 actcgccacggcgagcagatgctctcgcctcgcgag 12901321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 23171460 - 23171413
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  23171460 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 23171413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 23582717 - 23582670
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  23582717 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 23582670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 24503532 - 24503473
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  24503532 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24503473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 24628252 - 24628287
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24628252 actcgccacggcgagcagatgctctcgcctcgcgag 24628287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 24649689 - 24649654
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24649689 actcgccacggcgagcagatgctctcgcctcgcgag 24649654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 27379206 - 27379241
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27379206 actcgccacggcgagcagatgctctcgcctcgcgag 27379241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 27383252 - 27383287
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27383252 actcgccacggcgagcagatgctctcgcctcgcgag 27383287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 27602129 - 27602094
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27602129 actcgccacggcgagcagatgctctcgcctcgcgag 27602094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 41530783 - 41530818
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  41530783 actcgccacggcgagcagatgctctcgcctcgcgag 41530818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 12829492 - 12829434
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  12829492 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 12829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 23005263 - 23005221
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  23005263 ttagatgtttttgagtgcctgaacatgtataagaatgattagg 23005221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 23207812 - 23207770
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| || ||||||||||||||||| ||||||||||||||    
T  23207812 ttagatgattatgagtgcctgaacatgtataataatgattagg 23207770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 34137454 - 34137412
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  34137454 ttagatggttttgagtgcctgaacatgtataagaatgattagg 34137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 22460950 - 22460999
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  22460950 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 22460999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 23708383 - 23708432
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 153  Q
    ||||||||||||||  ||||| |||||||||||||| |||||| ||||||    
T  23708383 acctgaactcgccatagcgagtagaggctctcgccttgcgagttacccag 23708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 25176199 - 25176158
Alignment:
Q  103 gacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
    ||||||||||||||| |||||| |||||| ||||||||||||    
T  25176199 gacctgaactcgccatggcgagtagaggccctcgcctcgcga 25176158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 31756268 - 31756232
Alignment:
Q  109 aactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  31756268 aactcgccatggcgagtagaggctctcgcctcgcgag 31756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 37318700 - 37318652
Alignment:
Q  8 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 56  Q
    |||| |||||||||||||||  ||| ||||||||||||| |||||||||    
T  37318700 gcttatgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 37318652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 18818072 - 18818277
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| ||    
T  18818072 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtaaaatgaaacttttggttt 18818171  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||||||    
T  18818172 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggttttgcgacctttgttgcacgagttgt 18818271  T
Q  201 cgagag 206  Q
     |||||    
T  18818272 tgagag 18818277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 18878899 - 18879105
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  18878899 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 18878998  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||    
T  18878999 tctgacctgaactcgccaagacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagattttgcggcctttgttgcacgagttg 18879098  T
Q  200 tcgagag 206  Q
    |||||||    
T  18879099 tcgagag 18879105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 20536667 - 20536463
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||    
T  20536667 cttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttatgggat 20536568  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | |||||    
T  20536567 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttattaggttttgcgacctttgttgcacgagttg 20536468  T
Q  200 tcgag 204  Q
    |||||    
T  20536467 tcgag 20536463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 23406840 - 23406649
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||    
T  23406840 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattgtagaatgaaacttgtgggat 23406741  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  23406740 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggttttgtgacctttgttgc 23406649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 21923590 - 21923781
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactttt-ggat 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||    
T  21923590 cttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacctgaaaagatt-tagaatgaaactttttggat 21923688  T
Q  100 tctgacc-tgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  21923689 tctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggttttgcgacctttgttgc 21923781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 22627194 - 22626988
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||| | | |    
T  22627194 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctcgaaagattgtagaatgaacctttggaaat 22627095  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttg 199  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| | |||||||||||||||||| | |||||    
T  22627094 ctgacccgaacttgccacggcgagcagaggctctcgcctcgcgagtgatctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagttg 22626995  T
Q  200 tcgagag 206  Q
    | |||||    
T  22626994 ttgagag 22626988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 28648706 - 28648912
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaa-cttttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||||||||| |||||| ||    
T  28648706 cttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacatggaaagatt-tagaatgaaaccttttgaat 28648804  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    | |||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||||| |||||||||||||||||||| | ||||    
T  28648805 tttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 28648904  T
Q  199 gtcgagag 206  Q
    || |||||    
T  28648905 gttgagag 28648912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 6759716 - 6759544
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||| ||||||||||||||||| |     
T  6759716 cttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaatattttagaatgaaacttttggaaa 6759617  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6759616 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttag 6759544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 21918672 - 21918868
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||          |||||||| ||| ||    
T  21918672 cttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaaa----------tgaaacttgtgggat 21918761  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||    
T  21918762 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttagattttgcgacctttgttgcatgagttg 21918861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 41598643 - 41598494
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||||| ||| |    
T  41598643 cttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaat 41598544  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41598543 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacc 41598494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 23649012 - 23648806
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac-ttttgg-a 98  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| | ||||||||||| |||||| |    
T  23649012 cttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctgaaaagact-tagaatgaaacattttggaa 23648914  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattt-tgcgacctttgttgctcaagt 197  Q
    |||||||| |||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||| | |||    
T  23648913 ttctgacc-gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgcacgagt 23648815  T
Q  198 tgtcgagag 206  Q
    ||| |||||    
T  23648814 tgttgagag 23648806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22875524 - 22875353
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||| | || ||||||| ||||||||||||||||||| ||||| | |||  |||||||||||||||| |||||||||||||| ||| |    
T  22875524 cttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaactttgggaat 22875425  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag 172  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22875424 ctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag 22875353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 16092003 - 16092184
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| ||||||| || ||  ||||||||||| |    
T  16092003 cttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacctgaaaagatt-taaaaaaaaacttttggaat 16092101  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcga 181  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||||||||    
T  16092102 tctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgttaggattttgcga 16092184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 31971703 - 31971508
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||           | |||||| || |||    
T  31971703 cttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctggaa-----------ttaaacttgtgagat 31971615  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| | |||||    
T  31971614 tctgacctgaactcgccccggcgagcagaggctgtcacctcgcgagcgacccagaaatagagtgacttgttagattttgcgacctttgttgcacgagttg 31971515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 5 - 206
Target Start/End: Original strand, 16199324 - 16199514
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattctga 104  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||           ||||| ||||| | |||||||||    
T  16199324 gatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct-----------agaattaaactgtgggattctga 16199412  T
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgag 204  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| | ||||||||||    
T  16199413 cctgaactcgccacagcgagcagacgctctcgcctcgcgagtgacccaaaaacagagtgacttattggattttgcgacctttgttgcacgagttgtcgag 16199512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 7373208 - 7373084
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||  ||    
T  7373208 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgtagaatgaaacttgtgaaat 7373109  T
Q  100 tctgacctgaactcgccacggcgag 124  Q
    |||||||||||||||||||||||||    
T  7373108 tctgacctgaactcgccacggcgag 7373084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 25362813 - 25363008
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  25362813 cttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 25362901  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||| |||||||||||| |||| | |||||    
T  25362902 tctgacctgaactcgccatggcgagcagaggctctcgcctcgagagtgacccggaaacagagtgccttgtgagactttgcgacctttcttgcacgagttg 25363001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 5865939 - 5866082
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||||| ||| | ||     
T  5865939 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaa 5866037  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  5866038 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 5866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 21249840 - 21249697
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| ||| | ||     
T  21249840 cttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagact-tggaatgaaaatttggagaa 21249742  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  21249741 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 21249697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 17141372 - 17141229
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||||| ||| | ||     
T  17141372 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaa 17141274  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    || |||| |||||||||| |||||||||||||||||||||||||||    
T  17141273 tcagacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 17141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 21255678 - 21255535
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | |||||||| ||| | ||     
T  21255678 cttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagact-tggaatgaaaatttggagaa 21255580  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||    
T  21255579 tctgacc-gaactcgccatggcgagcagcggctctcgcctcgcgag 21255535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 21491451 - 21491308
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| | |||||||||| ||| | ||     
T  21491451 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagact-tagaatgaaaatttagagaa 21491353  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||  |||| |||| |||||| ||||||||| ||||||||||    
T  21491352 tctgacc-aaacttgccatggcgagtagaggctcttgcctcgcgag 21491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 10 - 144
Target Start/End: Complemental strand, 21674155 - 21674021
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattctgacctga 109  Q
    |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||||||||| |||||||||  |||  || |   ||||||    
T  21674155 ttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatatttgtgagttgcacctga 21674056  T
Q  110 actcgccacggcgagcagaggctctcgcctcgcga 144  Q
    |||||||| |||||| |||||| ||||||||||||    
T  21674055 actcgccatggcgagtagaggccctcgcctcgcga 21674021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45130693 - 45130766
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45130693 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 45130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 45130793 - 45130866
Alignment:
Q  133 ctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagag 206  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  45130793 ctcgcctcgcgagtgacccagaaacagagtgacttattagattttgcgacctttgttgcacgagttgtcgagag 45130866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 26355360 - 26355504
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttt-tggat 99  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| ||| || ||  ||||| |||||||||||||| | |||||||||  ||| || ||    
T  26355360 cttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactttagaatgaatttttgtgaat 26355459  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    | | ||||||||| |||| |||||| ||||||||||||||| ||||    
T  26355460 tgt-acctgaacttgccatggcgagtagaggctctcgcctcacgag 26355504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 39834291 - 39834147
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||| ||| ||| | ||||||||||||||||| |||||  ||||| |||||||||||   ||  |||||||| ||||  || |    
T  39834291 cttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatctttgtgagt 39834192  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
       |||||||||||||| |||||| ||||||||||||||||||||    
T  39834191 tgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 39834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 7373088 - 7373023
Alignment:
Q  141 gcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagag 206  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||||| |||||    
T  7373088 gcgagtgacccagaaacagagtgtcttgttaggttttgcgacctttgttgcacgagttgttgagag 7373023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38854913 - 38854961
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 49  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38854913 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 38854961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19801089 - 19801162
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| |  || || ||| |||||||||||    
T  19801089 cttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctggaa 19801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6520827 - 6520757
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctg 71  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||||| || ||  | ||||||||||||    
T  6520827 cttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacctg 6520757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 20499118 - 20499076
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  20499118 ttagatgattttgagtgcctgaacatgtataataatgattagg 20499076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 23760511 - 23760548
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaa 47  Q
    |||||||| |||||||||||||||||||||||||||||    
T  23760511 ttttgagttcctgaacatgtctaataatgattaggaaa 23760548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13507671 - 13507742
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctgg 72  Q
    |||||||| ||||||||||||||| |||| |||||||||||||  |||  | |||  |||||||||||||||    
T  13507671 cttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgg 13507742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13597203 - 13597274
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctgg 72  Q
    |||||||| ||||||||||||||| |||| |||||||||||||  |||  | |||  |||||||||||||||    
T  13597203 cttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgg 13597274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 20527871 - 20527812
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  20527871 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20527812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21414889 - 21414956
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaac 68  Q
    |||||||| ||||||||||||||| |||   | |||||||||||||||| ||||| |||||| |||||    
T  21414889 cttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 43252145 - 43252110
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  43252145 actcgccacggcgagcagatgctctcgcctcgcgag 43252110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 17085770 - 17085804
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||||||||||||||| ||||||||||||||    
T  17085770 ttttgagtgcctgaacatgtataataatgattagg 17085804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 17266579 - 17266621
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  17266579 ttagatgtttttgagtgcctgaatatgtataataatgattagg 17266621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 18865753 - 18865695
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  18865753 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 18865695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 37116882 - 37116840
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  37116882 ttagatgattttgagtgcctgaatatgtataataatgattagg 37116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 15538794 - 15538745
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  15538794 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 15538745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 24433997 - 24434046
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  24433997 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 24434046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 19111653 - 19111601
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  19111653 atgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 19111601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 19117944 - 19117892
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  19117944 atgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 19117892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 21972353 - 21972393
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  21972353 cctgtactcgccacggcgagcagatgctctcgccccgcgag 21972393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 21976438 - 21976478
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  21976438 cctgtactcgccacggcgagcagatgctctcgccccgcgag 21976478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 29123513 - 29123449
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||| |||| |||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  29123513 gatgctttagagtacctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 29123449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 37116704 - 37116664
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 37116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 38855015 - 38855055
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
    |||||||||||||| |||||| |||||| ||||||||||||    
T  38855015 acctgaactcgccatggcgagtagaggccctcgcctcgcga 38855055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 20862 - 20656
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||| ||    
T  20862 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattatagaatgaaacttgtgggat 20763  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| | |||||    
T  20762 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaaacagagtgccttgttagattttgcgacctttgttgcacgagttg 20663  T
Q  200 tcgagag 206  Q
    |||||||    
T  20662 tcgagag 20656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 165; Significance: 2e-88; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 125041 - 124838
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||| ||    
T  125041 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgag---gaacctggaaagattgtagaatgaaacttgtgggat 124945  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| | |||||    
T  124944 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaaagagtgtcttgttagattttgcgacctttgttgcacgagttg 124845  T
Q  200 tcgagag 206  Q
    |||||||    
T  124844 tcgagag 124838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 63020 - 62932
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaa 89  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| || || |||||| |||||||||||| ||| |||||||||    
T  63020 cttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatattttagaatgaa 62932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 136132 - 136173
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 136173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 144840 - 144881
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 13442725 - 13442527
Alignment:
Q  9 cttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-attctgacct 107  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacct 13442626  T
Q  108 gaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagag 206  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  13442625 gaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagttgtcgagag 13442527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 17488316 - 17488109
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  17488316 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtaggat 17488217  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgacttgttagattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||| | ||||    
T  17488216 tctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaaacagagtgccttgttagattttgcgacctttgttgcacgagtt 17488117  T
Q  199 gtcgagag 206  Q
    ||||||||    
T  17488116 gtcgagag 17488109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 26687346 - 26687155
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  26687346 cttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 26687247  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||    
T  26687246 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggttttacgacctttgttgc 26687155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 40213384 - 40213589
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| ||| ||    
T  40213384 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgggaatc 40213483  T
Q  102 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgt 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  40213484 taacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgt 40213583  T
Q  201 cgagag 206  Q
     |||||    
T  40213584 tgagag 40213589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 17499798 - 17499591
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  17499798 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgttggat 17499699  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgacttgttagattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||| ||||||||| ||||||||||||||||||| | ||||||| || |||||||||| ||||||||||||||||||||||||||| | ||||    
T  17499698 tctgacctgaattcgccacggtgagcagaggctctcgcctctctagtgacctagaaaacagagtgccttgttagattttgcgacctttgttgcacgagtt 17499599  T
Q  199 gtcgagag 206  Q
    ||||||||    
T  17499598 gtcgagag 17499591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 25476047 - 25476253
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||  ||||||||||||||| |||||||||||||||||| |    
T  25476047 cttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaaagattttagaatgaaacttttggaat 25476146  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | |||||    
T  25476147 ctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttg 25476246  T
Q  200 tcgagag 206  Q
    | |||||    
T  25476247 ttgagag 25476253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 18438993 - 18438793
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||||| ||    
T  18438993 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaaagatt-tagaatgaaacttttggaat 18438895  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| | ||||    
T  18438894 tctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 18438795  T
Q  199 gt 200  Q
    ||    
T  18438794 gt 18438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 20698109 - 20698304
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  20698109 cttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 20698197  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||    
T  20698198 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgtggcacgagttg 20698297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 11424425 - 11424631
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac-ttttggat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||||||| ||||| |     
T  11424425 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaaagatt-tagaatgaaactttttgaac 11424523  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| ||||||| | |||||||||||||||||| | ||||    
T  11424524 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 11424623  T
Q  199 gtcgagag 206  Q
    || |||||    
T  11424624 gttgagag 11424631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 17247948 - 17248100
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||| |    
T  17247948 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaat 17248047  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 153  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17248048 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 17248100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 14573047 - 14572841
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| ||||| |     
T  14573047 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagact-tagaatgaaacctttggaaa 14572949  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||  ||||||| | |||||||||||||||||| | ||||    
T  14572948 tctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtttttgcgacctttgttgcacgagtt 14572849  T
Q  199 gtcgagag 206  Q
    || |||||    
T  14572848 gttgagag 14572841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 14973313 - 14973132
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| | ||||||| ||||| ||| |||||||| |    
T  14973313 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaaccagaaaagattttagaaagaa-cttttggaat 14973215  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcga 181  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  14973214 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttaggattttgcga 14973132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 14576495 - 14576701
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| |||| | |||||||||||||| | ||||||||||| ||||| |     
T  14576495 cttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaaagact-tagaatgaaacctttggaaa 14576593  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||| | ||||    
T  14576594 tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgacctttgttgcacgagtt 14576693  T
Q  199 gtcgagag 206  Q
    || |||||    
T  14576694 gttgagag 14576701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 23083023 - 23083223
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactttt-ggat 99  Q
    |||||||||||||||||||||| | |||||||||| ||||||||| | |||||||||||||| || ||||||||||||| ||||||||||||||| ||||    
T  23083023 cttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtaggatgagattggacctggaaagatt-tagaatgaaactttttggat 23083121  T
Q  100 tctgacc-tgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagtt 198  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||| | ||||    
T  23083122 tctgacccttaactcgccatggcgagtagaggctctcgcctcgcgaatgacccagaaacatagtgtcttgttaggttttgcgacctttgttgcacgagtt 23083221  T
Q  199 gt 200  Q
    ||    
T  23083222 gt 23083223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 43841328 - 43841185
Alignment:
Q  64 tgaacctggaaagattgtagaatgaaacttttgga-ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagt 162  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  43841328 tgaacctggaaagattgtagaatgaaacttgtggaattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacagagt 43841229  T
Q  163 gacttgttagattttgcgacctttgttgctcaagttgtcgagag 206  Q
    | |||||||| |||||||||||||||| | | |||||| |||||    
T  43841228 gtcttgttaggttttgcgacctttgttacacgagttgttgagag 43841185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 12340211 - 12340068
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| | ||     
T  12340211 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaa 12340113  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| | |||||||||||| |||||||||||||||||||||||||||    
T  12340112 tct-aactgaactcgccatggcgagcagaggctctcgcctcgcgag 12340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 53070361 - 53070505
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||   |||  ||||||||  |||||||      
T  53070361 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttggaag 53070459  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  53070460 ctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 53070505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 12399654 - 12399468
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |  |||||||||||           |||||||| || | |    
T  12399654 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatataggatgggtttgaacctggaa-----------tgaaacttgtgaggt 12399566  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||  ||||||||||||| |||| ||||||||||||| | |||||    
T  12399565 tctgacctgaactcgccacggcgagtaaaggctctcgcctcacgagtgacccagaaac--agtgacttgttag-ttttccgacctttgttgcacgagttg 12399469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 30030287 - 30030092
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac--ttttgga 98  Q
    ||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||           ||||||  ||| | |    
T  30030287 cttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacctggaa-----------tgaaacagtttggaa 30030199  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtga-cccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 197  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||| |||| || ||||||||||||||||||||||||||| | |||    
T  30030198 ttctgacct-aactcgccatggcgagcagaggctctcgcctcgcgagtaatcccagaa-cagaatgccttgttagattttgcgacctttgttgcacgagt 30030101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 12852027 - 12852169
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gatt 100  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| | ||||||||||||||||  | |    
T  12852027 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatctggaaagact-tagaatgaaacttttgataat 12852125  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||    
T  12852126 ctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 12852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 12933972 - 12934117
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |  || |||||| |||||||||||||||| |||||||||| |||||        
T  12933972 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaa-ttttgtgaa 12934070  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  12934071 ctgaacctgaactcgccatggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 14666053 - 14665921
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gattctgacctgaa 110  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| | || ||||| |||||    
T  14666053 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaa 14665956  T
Q  111 ctcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| | |||||||||||||||||||||||||||    
T  14665955 ctcgcaatggcgagcagaggctctcgcctcgcgag 14665921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 14669208 - 14669076
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gattctgacctgaa 110  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| | |||||||||||||| | || ||||| |||||    
T  14669208 ttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaa 14669111  T
Q  111 ctcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| ||||||||||||||||| |||||||||    
T  14669110 ctcgccatggcgagcagaggctctcacctcgcgag 14669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 14735566 - 14735434
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gattctgacctgaa 110  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| | || ||||| |||||    
T  14735566 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaa 14735469  T
Q  111 ctcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| | |||||||||||||||||||||||||||    
T  14735468 ctcgcaatggcgagcagaggctctcgcctcgcgag 14735434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 32308127 - 32307983
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || || |||||| ||||||| | |||| | |||||||||  ||||||       
T  32308127 cttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttgggaa 32308030  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  32308029 ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 9513369 - 9513228
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  || |||||| |||||||| ||||||| |||||||||| ||||| ||     
T  9513369 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtgaa 9513270  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcg 141  Q
        |||||||||| ||| |||||||||||||||||||||||    
T  9513269 ctaaacctgaactcaccatggcgagcagaggctctcgcctcg 9513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 9521344 - 9521203
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  || |||||| |||||||| ||||||| |||||||||| ||||| ||     
T  9521344 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtgaa 9521245  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcg 141  Q
        |||||||||| ||| |||||||||||||||||||||||    
T  9521244 ctaaacctgaactcaccatggcgagcagaggctctcgcctcg 9521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 49667746 - 49667890
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||| |  || |||||| |||||||||||||||| |||||||||| | |||        
T  49667746 cttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaa-tattgtgaa 49667843  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  49667844 ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 49389306 - 49389446
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||| ||| | |||||||||  |||||        
T  49389306 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--ttttgtgaa 49389403  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgc 142  Q
    ||| |||||||||||||| |||||||||||| |||||||||||    
T  49389404 ctgaacctgaactcgccatggcgagcagaggttctcgcctcgc 49389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 13209990 - 13210133
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatg-aaacttttg-ga 98  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||| |||||||||||||| | ||||||| ||||| ||| ||    
T  13209990 cttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtagaatgagattgaacctggaaagact-tagaatgaaaactcttgaga 13210087  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
     | ||||| |||||||||| |||||| ||||||||||||||||||||    
T  13210088 atgtgacc-gaactcgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4588477 - 4588569
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttt 94  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| | ||||||||||||||    
T  4588477 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaagact-tagaatgaaacttt 4588569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14179781 - 14179693
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaa 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| | ||||||||||    
T  14179781 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaagact-tagaatgaaa 14179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 16097789 - 16097645
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||| ||| ||||||||| |||||||||||||||||| ||||||||||| || || |||||| |||||||| ||||||| |||||||||  |||  || |    
T  16097789 cttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattttagaatgaatttttgtgaat 16097690  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
      ||||||||||||||| || ||| ||||||||||||||||||||    
T  16097689 tggacctgaactcgccatggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 1644349 - 1644489
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattctg- 103  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| |  || |||||| ||||||||  |||| | |||||||||  |||||    |||     
T  1644349 gatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagactttagaatgaa--ttttgtgaactga 1644446  T
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  1644447 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43842637 - 43842576
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaga 62  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43842637 cttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtaggatgaga 43842576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 324693 - 324549
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattc 101  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||| |||||| |||||   |||   ||  ||||||||  ||| ||| |     
T  324693 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatgaatttttgggagtt 324594  T
Q  102 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
      ||||||||||||||  ||||| |||||||||||||||||||||    
T  324593 gcacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17247182 - 17247236
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 55  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  17247182 cttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtag 17247236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16104239 - 16104095
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||| || || |||||  ||||||||| |||| | |||| ||||  || || |||    
T  16104239 cttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgggaagactttagattgaattttgtgaatt 16104140  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
       | | ||||||| |  ||||||||||||||||||||||| ||||    
T  16104139 -gaatccgaactcgtcgtggcgagcagaggctctcgcctcgtgagt 16104095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12171779 - 12171827
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 49  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12171779 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 16796875 - 16796815
Alignment:
Q  131 ctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||| |||||||||||||||||    
T  16796875 ctctcgcctcgcgagtgacccggaaacagagtgccttgtgagactttgcgacctttgttgc 16796815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 16809844 - 16809724
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||| |||||||||||||| |||||||    ||||||||||||||||||||||||||||||| ||| ||||           ||||||||||| | ||||    
T  16809844 cttaaatgcttttgagtgcttgaacat----aataatgattaggaaagaatgtaggatgagattgatcctg-----------gaatgaaacttgtgggat 16809760  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctc 135  Q
    |||||||||||||||||| |||||||||| ||||||    
T  16809759 tctgacctgaactcgccatggcgagcagatgctctc 16809724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 14234949 - 14234809
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||  |||||||||||||||||||| |||| |||||||||||||| | |||  ||||| ||||||  |||| | |  ||||||||  ||| ||| |    
T  14234949 cttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacc-cgaaatagttaagaatgaatttttgggagt 14234851  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgc 142  Q
       |||||||||||||| |||||| |||||| ||||||||||    
T  14234850 tgcacctgaactcgccatggcgagtagaggccctcgcctcgc 14234809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 1465071 - 1465215
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||| ||| | || ||||||| |||||| |||||  ||||| |||||||||||  |||  |||| |||  | |  || |    
T  1465071 cttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctggaataatttaagaacgaatttgtgtgagt 1465170  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
       ||||||||| |||| |||||| ||||||||||||||||||||    
T  1465171 tgcacctgaacttgccatggcgagtagaggctctcgcctcgcgag 1465215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2050863 - 2050911
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 49  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  2050863 cttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaaga 2050911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 52523390 - 52523462
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||| | |||  ||| | |||||||||||    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaa 52523462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 22109938 - 22109980
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  22109938 ttagatgtttttgagtgcctgaacatgtataataatgattagg 22109980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 42386858 - 42386725
Alignment:
Q  13 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-attctgacctgaac 111  Q
    ||||||| ||||||||  |||||||||||||| |||| | |||  || || |||||||| ||| | |  |||||||||||||||| | |   ||||||||    
T  42386858 tgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctg-aaatagttaagaatgaaacttttgggagttatacctgaac 42386760  T
Q  112 tcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||| |||||| |||||||||| ||||||||||    
T  42386759 tcgccatggcgagtagaggctctcacctcgcgagt 42386725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15471383 - 15471310
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||| |||||||| ||||||||||| |||| |||||||||||||| || ||  | ||| |||||||||||    
T  15471383 cttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctggaa 15471310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 19725671 - 19725720
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||| || |||||||| |||||||||| ||||||||||||||||    
T  19725671 ggattctgacttgtactcgccatggcgagcagatgctctcgcctcgcgag 19725720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 43927638 - 43927597
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  43927638 ttagatgattttgagtgcctgaacatgtataataatgattag 43927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 839668 - 839609
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  839668 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 7110034 - 7109999
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7110034 actcgccacggcgagcagatgctctcgcctcgcgag 7109999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 7113969 - 7113934
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7113969 actcgccacggcgagcagatgctctcgcctcgcgag 7113934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14501658 - 14501615
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  14501658 cttagatgattttgagtgcctgaatatgtataataatgattagg 14501615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 22322000 - 22321965
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22322000 actcgccacggcgagcagatgctctcgcctcgcgag 22321965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 22337055 - 22337020
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22337055 actcgccacggcgagcagatgctctcgcctcgcgag 22337020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23275200 - 23275157
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  23275200 cttagatgattttgagtgcctgaatatgtataataatgattagg 23275157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 24188199 - 24188140
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  24188199 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24188140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 27409417 - 27409452
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27409417 actcgccacggcgagcagatgctctcgcctcgcgag 27409452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 55149400 - 55149341
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  55149400 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 55149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 316654 - 316612
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  316654 ttagatgtttttgagtgcctgaatatgtataataatgattagg 316612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 22643022 - 22643080
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||| ||||    
T  22643022 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagacttaacc 22643080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 41092030 - 41092076
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||||    
T  41092030 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtagga 41092076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 45797701 - 45797659
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  45797701 ttagatgattttgagtgcctgaatatgtataataatgattagg 45797659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 1598240 - 1598289
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  1598240 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 1598289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 3834020 - 3833971
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  3834020 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 3833971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 4291194 - 4291149
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 56  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  4291194 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 4291149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 13251148 - 13251095
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    ||||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  13251148 gatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 13251095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 13257794 - 13257741
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    ||||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  13257794 gatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 13257741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 17242318 - 17242269
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  17242318 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 17242269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 17710275 - 17710320
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 56  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  17710275 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 17710320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 37250932 - 37250973
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 37250973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 38814730 - 38814681
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  38814730 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 38814681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 12171869 - 12171909
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
    ||||||||| |||| |||||| |||||||||||||||||||    
T  12171869 acctgaactggccatggcgagtagaggctctcgcctcgcga 12171909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 15483011 - 15482959
Alignment:
Q  93 tttggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||| |||| | || |||||||| |||||||||| ||||||||||||||||    
T  15483011 tttggaatctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 15482959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 15691955 - 15692019
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  15691955 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15692019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 22110116 - 22110156
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 22110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 23704446 - 23704510
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  23704446 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 23722902 - 23722966
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  23722902 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23722966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 23741358 - 23741422
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  23741358 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23741422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 41201475 - 41201539
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  41201475 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 41201539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 53380030 - 53380082
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  53380030 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 53380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 53386682 - 53386734
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  53386682 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 53386734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 159; Significance: 7e-85; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 51546 - 51752
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||    
T  51546 cttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtcgaatgaaacttgtgggat 51645  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    | |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  51646 tttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttg 51745  T
Q  200 tcgagag 206  Q
    |||||||    
T  51746 tcgagag 51752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 32994 - 32826
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattc 101  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||| | |||  ||||| ||||| |||||   |   |||||| |  ||| ||| |     
T  32994 ttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatggatttttgggagtt 32895  T
Q  102 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt 170  Q
      |||||||||||||| |||||| |||||| |||||||||||||  ||||||  ||||| || ||||||    
T  32894 acacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgtt 32826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 159; Significance: 7e-85; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 52371 - 52166
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  52371 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 52272  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||| | |||||    
T  52271 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttaggttttgcgacc-ttgttgcacgagttg 52173  T
Q  200 tcgagag 206  Q
    | |||||    
T  52172 ttgagag 52166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 167652 - 167847
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||           ||| |||||||| ||| ||    
T  167652 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct-----------agattgaaacttgtgggat 167740  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||    
T  167741 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgaattg 167840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 13551 - 13345
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| ||| ||    
T  13551 cttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaatctgaaaagattgtagaatgaaacttgtgggat 13452  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | |||||    
T  13451 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttaggttttgcgacctttgttgcacgagttg 13352  T
Q  200 tcgagag 206  Q
    | |||||    
T  13351 ttgagag 13345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 34579 - 34437
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||||| ||| | ||     
T  34579 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttggagaa 34481  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||    
T  34480 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcga 34437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 39218 - 39013
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  39218 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttt-gaatgaaacttgtggatt 39120  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||| | |||||    
T  39119 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacatagtgacttgttaggtttttgcgacctttgttgcacgagttg 39020  T
Q  200 tcgagag 206  Q
    | |||||    
T  39019 ttgagag 39013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 44053288 - 44053082
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||| ||||||||| ||| ||    
T  44053288 cttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacctgtaaagattataggatgaaacttgtgggat 44053189  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||    
T  44053188 tctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagttg 44053089  T
Q  200 tcgagag 206  Q
    |||||||    
T  44053088 tcgagag 44053082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22636893 - 22636688
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| ||    
T  22636893 cttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaaattgtagaatgaaacttgtgggat 22636794  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| | |||||    
T  22636793 tctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcttgttaggttttgcgacctttgttgcacgagttg 22636694  T
Q  200 tcgaga 205  Q
    | ||||    
T  22636693 ttgaga 22636688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 7799156 - 7798967
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| ||||||||||||| |||||||||||||||| | | ||    
T  7799156 cttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacctggaaagtttgtagaatgaaacttgtagtat 7799057  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgtt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  7799056 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgtcttgttaggttttgcgacctttgtt 7798967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 14039108 - 14038908
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||| |     
T  14039108 cttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacctagaaagattttagaatgaaacttttggaaa 14039009  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| || ||||||    
T  14039008 tctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 14038909  T
Q  199 g 199  Q
    |    
T  14038908 g 14038908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3097091 - 3096896
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  3097091 cttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 3097003  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  3097002 tctgacctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttg 3096903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 15091355 - 15091157
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat-t 100  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||  |    
T  15091355 ttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacctggaaggattttagaatgaaacttttggaaat 15091256  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| || ||||||    
T  15091255 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 15091157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16377184 - 16377375
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||  ||| ||| |    
T  16377184 cttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcgtagaatgaacttttgggaat 16377283  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| |||||||| |||||||||||    
T  16377284 ctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacatagtgccttgttaggattttgctacctttgttgc 16377375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 7089325 - 7089130
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  7089325 cttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttatgggat 7089237  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   |||||    
T  7089236 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgtcttgttagattttgcgacctttgttgcaagagttg 7089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 14052975 - 14053170
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||           | |||||| ||| ||    
T  14052975 cttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacttggaa-----------ttaaacttgtgggat 14053063  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  14053064 tctgacctgaactcaccatggcgagcagaggctctcgccttgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttg 14053163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 12903204 - 12903025
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  12903204 cttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 12903117  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12903116 tctgacctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgc 12903025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 44928585 - 44928737
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||| |    
T  44928585 cttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaat 44928684  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 153  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  44928685 ctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 44928737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 17047746 - 17047940
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||  |||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||            | ||||||||||| ||| ||    
T  17047746 cttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac------------tggaatgaaacttgtgggat 17047833  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||| | |||||    
T  17047834 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttgtgagactttgcgacctttgttgcacgagttg 17047933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 44102668 - 44102520
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||||| |||||||||| ||||| |||||| |||||||  || |    
T  44102668 cttagatgcttttgagtgcctgagcatgtttaataatgattatgaa-gaatgtaggatgagattgaacctggatagattttagaataaaactttgagaat 44102570  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44102569 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacc 44102520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 15552272 - 15552129
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| | |||||| ||| ||| | ||     
T  15552272 cttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagact-tagaatcaaaatttggagaa 15552174  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  15552173 tctgacc-gaactcgccacggcgagcagaggctcgcgcctcgcgag 15552129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 24029200 - 24029057
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||  ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||| | ||     
T  24029200 cttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaa 24029102  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  24029101 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16239654 - 16239769
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag-aatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  16239654 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaaagatt-tagaatgaaacttgtggat 16239752  T
Q  100 tctgacctgaactcgcc 116  Q
    ||| |||||||||||||    
T  16239753 tctaacctgaactcgcc 16239769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 6190892 - 6190783
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  6190892 cttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 6190793  T
Q  100 tctgacctga 109  Q
    | ||||||||    
T  6190792 tttgacctga 6190783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 13812471 - 13812614
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| | |||||||||||||| | ||     
T  13812471 cttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaa 13812569  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||    
T  13812570 tctga-ctaaactcgccatggcgagcagaggctctcgcctcgcgag 13812614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 23374125 - 23374221
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgt 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||    
T  23374125 acctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgttagattttgcaacctttgttgcacgagttgt 23374221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 16597104 - 16596963
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||| ||| | ||     
T  16597104 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagact-tagaatgaaaatttagagaa 16597006  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcg 143  Q
    ||||||| |||||||||| |||||| ||||| ||||||| ||||    
T  16597005 tctgacc-gaactcgccatggcgagtagaggttctcgccccgcg 16596963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 22633876 - 22634018
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat-- 99  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||      
T  22633876 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaac-tttggataa 22633973  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    || ||  ||||||||||| |||||||||||||||||||||||||||    
T  22633974 tcaga-ttgaactcgccatggcgagcagaggctctcgcctcgcgag 22634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 20156952 - 20157095
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttt-tggat 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||  | ||||||||||||||   ||     
T  20156952 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaggct-tagaatgaaactttgaagaa 20157050  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    | ||| |||||||||||| |||| ||||||||||||||||||||||    
T  20157051 tatga-ctgaactcgccatggcgtgcagaggctctcgcctcgcgag 20157095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 7894077 - 7893968
Alignment:
Q  84 aatgaaacttttgg-attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcga 181  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| | ||||||||    
T  7894077 aatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcga 7893978  T
Q  182 cctttgttgc 191  Q
    ||||||||||    
T  7893977 cctttgttgc 7893968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 8846834 - 8846689
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| || || |||||| |||||||||||||||| |||||||||  ||||| ||     
T  8846834 cttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttttgtgag 8846735  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |   |||| ||||||||| |||||| ||||||||||||||||||||    
T  8846734 ttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgag 8846689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 21814965 - 21815109
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||| | ||||||||||   |||  ||||||||  |||||||      
T  21814965 cttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaatt-aagaatgaactttttggaag 21815063  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||    
T  21815064 ctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 21815294 - 21815438
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||| ||| |||| | ||||||||||   |||  ||||||||  |||||||      
T  21815294 cttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctggattaatt-aagaatgaactttttggaag 21815392  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  21815393 ctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 21818387 - 21818531
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||| | ||||||||||   |||  ||||||||  |||||||      
T  21818387 cttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaatt-aagaatgaactttttggaag 21818485  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||    
T  21818486 ctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21818531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 12774457 - 12774313
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||| || || |||||| |||||||||| |||   |||||||||  |||||        
T  12774457 cttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgttagaatgaa--ttttgtgaa 12774360  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  12774359 ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 16239764 - 16239838
Alignment:
Q  133 ctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgtcgagag 206  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | |||||| |||||    
T  16239764 ctcgcctcgcgagtgacccagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagttgttgagag 16239838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 15099809 - 15099665
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||| |||||||||||   ||  ||||||||  |||  || |    
T  15099809 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatttttgtgagt 15099710  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
       |||||||||||||| |||||| ||||||||||||||||||||    
T  15099709 tgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 15099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 6190782 - 6190715
Alignment:
Q  139 tcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagag 206  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||| | || |||||||||    
T  6190782 tcgcgagtgacccaaaaatagagtgacttgttagattttgcgacctttgttgcacgagctgtcgagag 6190715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 17046765 - 17046718
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 17046718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 39705950 - 39706092
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || ||  | ||| |||||||||||   ||  |||| |||  ||||| ||     
T  39705950 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctggaatagtttaagaacgaa--ttttgagag 39706047  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
    |   |||||||||||||| |||||| |||||| ||||||||||||    
T  39706048 ttacacctgaactcgccatggcgagtagaggccctcgcctcgcga 39706092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 3332287 - 3332201
Alignment:
Q  58 tgagactgaacctggaaagattgtagaatgaaacttttg-gattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||||||||| | |||||||||||||| | || |||||| ||||||||||| |||||||||||||||||||||||||||    
T  3332287 tgagattgaacctggaaagact-tagaatgaaactttggagaatctgac-tgaactcgccatggcgagcagaggctctcgcctcgcgag 3332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 52242856 - 52243000
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattc 101  Q
    ||||||| ||| |||||||||||||||| |||||||||| |||||||| | ||| |||||| |||||||||||   ||  |||||| |   || ||| |     
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcattgttgggagtt 52242955  T
Q  102 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
      ||||||||||||||  ||||| |||||||||||||||||||||    
T  52242956 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 52243000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 15464592 - 15464792
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattc 101  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| | |||  ||||| |||||||| ||   ||  |||||| |  ||| ||  |     
T  15464592 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggatttttgggtgtt 15464691  T
Q  102 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt--agattttgcgacctttgttgctcaagttg 199  Q
      |||||||||| |||  ||||| |||||||||||||||||||||  |||||  ||||| |||||||||   |||||||| | |||||| || |||||||    
T  15464692 acacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttgtcgcacaagttg 15464791  T
Q  200 t 200  Q
    |    
T  15464792 t 15464792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43198250 - 43198323
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| | |||  ||||| ||||| |||||    
T  43198250 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatggaa 43198323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 14685593 - 14685534
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||| ||| |||||||    
T  14685593 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggataagattgaacct 14685534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15190776 - 15190729
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 48  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  15190776 cttagatgtttttgagtgcctgaacatgtctaattatgattagaaaag 15190729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15868297 - 15868344
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 48  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  15868297 cttagatgattttgagtgcctgaatatgtataataatgattaggaaag 15868344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13844998 - 13844950
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 49  Q
    |||||||| ||||||||| ||||||||||||||| |||||||| |||||    
T  13844998 cttagatgtttttgagtgtctgaacatgtctaattatgattagaaaaga 13844950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 14679389 - 14679325
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||| |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  14679389 atgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14679325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 4561107 - 4561142
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4561107 actcgccacggcgagcagatgctctcgcctcgcgag 4561142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 5756711 - 5756746
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5756711 actcgccacggcgagcagatgctctcgcctcgcgag 5756746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 23838855 - 23838796
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  23838855 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23838796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 33742710 - 33742675
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33742710 actcgccacggcgagcagatgctctcgcctcgcgag 33742675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 13436 - 13478
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||||||||||||||| || ||||||||||||||    
T  13436 ttagatgattttgagtgcctgaacaagtataataatgattagg 13478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 386038 - 386096
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  386038 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 386096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 7900855 - 7900913
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  7900855 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 7900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 15321778 - 15321836
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  15321778 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 32306582 - 32306624
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||    
T  32306582 ttagatggttttgagtgcctaaacatgtataataatgattagg 32306624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32851910 - 32851868
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    |||||||| ||||||||||||||| |||| |||||||||||||    
T  32851910 cttagatgattttgagtgcctgaatatgtataataatgattag 32851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 51493502 - 51493560
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  51493502 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 51493560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 12522505 - 12522460
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  12522505 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 12522460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 16956334 - 16956379
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 56  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  16956334 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 16956379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 19757361 - 19757410
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  19757361 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 19757410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 19782445 - 19782396
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  19782445 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 19782396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 40471902 - 40471837
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| |||||||    
T  40471902 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacct 40471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 45938493 - 45938444
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  45938493 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 45938444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 40478575 - 40478511
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  40478575 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 40478511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 3928 - 3724
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-att 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||| |||    
T  3928 ttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgattgtagaatcaaacttgtgggatt 3829  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| | ||||||    
T  3828 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgagttgttaggttttgcgacctttgttgcacgagttgt 3729  T
Q  201 cgaga 205  Q
     ||||    
T  3728 tgaga 3724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 801 - 610
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||||| | |||||||||||||||||| |    
T  801 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctagaaagaatttagaatgaaacttttggaat 702  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||||||||    
T  701 ctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcaacctttgttgc 610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 50209875 - 50210081
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||| |    
T  50209875 cttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatt-tagaatgaaacttttggaat 50209973  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||    
T  50209974 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 50210073  T
Q  199 gtcgagag 206  Q
    || |||||    
T  50210074 gttgagag 50210081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 34510239 - 34510039
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat- 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||      
T  34510239 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaa 34510141  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| | |||||||||||||||||| | ||||    
T  34510140 tctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcatgttaggtttttgcgacctttgttgcacgagtt 34510041  T
Q  199 gt 200  Q
    ||    
T  34510040 gt 34510039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 22532728 - 22532537
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat- 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||      
T  22532728 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaggattgtagaatgaa-cttttggaaa 22532630  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  22532629 tctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttaggattttgcgacctttgttgc 22532537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22354234 - 22354439
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||| |||||||||| ||||||||||||||||||| ||| ||    
T  22354234 cttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacctggatagattgtagaatgaaacttgtgggat 22354333  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  22354334 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaaacagagtgacttgttaggttttgcgacctttgttgcacgagttg 22354433  T
Q  200 tcgaga 205  Q
    | ||||    
T  22354434 ttgaga 22354439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 20846892 - 20847081
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||           |||||||| || | |    
T  20846892 cttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgaggt 20846980  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  20846981 tttgacctgaactcgccacggcgagcagaggctcttgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttg 20847080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 433466 - 433314
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||| |    
T  433466 cttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaat 433367  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 153  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  433366 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 433314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21027128 - 21026939
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||           |||||||| || | |    
T  21027128 cttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgaggt 21027040  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||    
T  21027039 tctgacctaaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgttagattttgcgacctttgttgcacgagttg 21026940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 27250402 - 27250597
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||          || || | |||||    
T  27250402 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctggaatga----------aacctgtgggatt 27250491  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgt 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||| | ||||||    
T  27250492 ctgacctgaactcgccacgtcgagcagaggctctcgcctcgcgagtgacacagaaacagagtcccttgttatattttgcgacctttgttgcacgagttgt 27250591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 20135646 - 20135456
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac-ttttgg-a 98  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||| | ||||||||||| |||||| |    
T  20135646 cttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagact-tagaatgaaacattttggaa 20135548  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattt-tgcgacctttgttg 190  Q
    |||||||| |||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  20135547 ttctgacc-gaactcgccatggcgagcagaagctctcacctcgcgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttg 20135456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 22355847 - 22356042
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           ||||| || ||| ||    
T  22355847 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaatttgtgggat 22355935  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgac-ttgttagattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||| | ||||    
T  22355936 tctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgttagattttgagacctttgttgcacgagtt 22356034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 22357533 - 22357728
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           ||||| || ||| ||    
T  22357533 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaatttgtgggat 22357621  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgac-ttgttagattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||| | ||||    
T  22357622 tctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgttagattttgagacctttgttgcacgagtt 22357720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 2 - 190
Target Start/End: Original strand, 38801065 - 38801243
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-att 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||   |||        ||||| ||| |||    
T  38801065 ttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctggaa---ttg--------aacttgtgggatt 38801153  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttg 190  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38801154 ctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttagattttgcgacctttgttg 38801243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 33681468 - 33681301
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||||| || || |||||| |||||||||||||||| |||||||||  |||  || |    
T  33681468 cttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtgagt 33681369  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttg 168  Q
       |||||||||||||| |||||||||||||||||||||||||| | ||||||  |||||||| ||||    
T  33681368 tgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttg 33681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 20919060 - 20918917
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | ||||||  || ||| | ||     
T  20919060 cttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatttaaatttggagaa 20918962  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  20918961 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 20918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21754494 - 21754350
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || | |||| ||||||||| |||| | |||||||||  |||||        
T  21754494 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagactttagaatgaa--ttttgtgaa 21754397  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  21754396 ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 52927643 - 52927786
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| || || |||||| |||||||||||||||| | |||||||  ||||  | |    
T  52927643 cttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattttggaatgaattttttaaagt 52927742  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
      ||||||||||||||| |||||| |||||| ||||||||||||    
T  52927743 tagacctgaactcgccatggcgagtagaggccctcgcctcgcga 52927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 20091136 - 20091281
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac--ttttgga 98  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||  ||||||| ||||||| || ||||| ||||| | |||||||||||   || |||    
T  20091136 cttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctgaaaagact-tagaatgaaacaacttggga 20091234  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| |||||||||| | |||| |||||||||    
T  20091235 ttctgacctgaactcgccatggcgagcagatgttctcacctcgcgag 20091281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 20248734 - 20248592
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattct 102  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  | || |||||| |||||||||| ||| | ||||||| || |||||    ||    
T  20248734 tagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagactttagaatg-aatttttgtgaact 20248636  T
Q  103 g-acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    | |||||||||||||| |||||| ||||||| ||||||||||||    
T  20248635 gaacctgaactcgccatggcgagtagaggctatcgcctcgcgag 20248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 22238088 - 22237946
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||  ||||||||||||||||||||||||||||| |||||||||| || || |||||| | |||||||||||||| | |||||||  ||||| ||     
T  22238088 cttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattttggaatgaa--ttttgtgag 22237991  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
    |   || ||||||||||| |||||| |||||| ||||||||||||    
T  22237990 ttgcacttgaactcgccatggcgagtagaggccctcgcctcgcga 22237946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 22921529 - 22921672
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || ||  ||||| |||||| ||||   ||  |||| |||  |||  || |    
T  22921529 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaaccaggaatagtttaagaacgaatttttgagagt 22921628  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
      ||| ||||||||||| |||||| |||||||||||||||||||    
T  22921629 tagacttgaactcgccatggcgagtagaggctctcgcctcgcga 22921672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21301200 - 21301245
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21301200 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21162187 - 21162117
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctg 71  Q
    |||| ||||||||||||||||||| | ||||||||| |||| ||||||||||||| |||||| ||||||||    
T  21162187 cttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 28194114 - 28194254
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattctga 104  Q
    |||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||| |||||||| ||   ||  |||||||| ||||  || |   |    
T  28194114 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaatagtttaagaatgaatctttgtgagttgca 28194213  T
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  28194214 cctgaactcgccatggcaagtagaggctctcgcctcgcgag 28194254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 16367873 - 16367946
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaa 75  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||  ||||| ||||||||||||    
T  16367873 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctggaaa 16367946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 20637206 - 20637165
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  20637206 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 20637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 21162121 - 21162080
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  21162121 acctgtactcgccatggcgagcagaggctctcgcctcgcgag 21162080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43697819 - 43697746
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||| | |||||||| ||||| | |||  ||||| | |||||||||    
T  43697819 cttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctggaa 43697746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 16375231 - 16375266
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16375231 actcgccacggcgagcagatgctctcgcctcgcgag 16375266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 20524899 - 20524958
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  20524899 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20524958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 21407688 - 21407653
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  21407688 actcgccacggcgagcagatgctctcgcctcgcgag 21407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 21438216 - 21438157
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  21438216 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21438157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 23763633 - 23763574
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  23763633 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 35981352 - 35981419
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctgg 72  Q
    |||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||| |||||||||    
T  35981352 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgg 35981419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 52639874 - 52639839
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  52639874 actcgccacggcgagcagatgctctcgcctcgcgag 52639839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 16381698 - 16381652
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 48  Q
    ||||||| ||||||||||||| |||||| ||| ||||||||||||||    
T  16381698 ttagatggttttgagtgcctggacatgtataagaatgattaggaaag 16381652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 19063942 - 19063896
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  19063942 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 19063896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 19111832 - 19111786
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  19111832 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 19111786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 21895895 - 21895941
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 48  Q
    ||||||| || |||||||||||||| || ||||||||||||||||||    
T  21895895 ttagatgattatgagtgcctgaacaagtataataatgattaggaaag 21895941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 35260718 - 35260760
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| || ||||||||||||||||| ||||||||||||||    
T  35260718 ttagatgattctgagtgcctgaacatgtataataatgattagg 35260760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 52940464 - 52940506
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||    
T  52940464 ttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 12647215 - 12647166
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  12647215 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 12647166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 26065295 - 26065254
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 26065254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 35981451 - 35981492
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||||| || ||| ||||||||||||||||||||    
T  35981451 acctgaactcgccatggtgagtagaggctctcgcctcgcgag 35981492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 45310135 - 45310175
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  45310135 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 45310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 5 - 206
Target Start/End: Original strand, 8198 - 8400
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-attctg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  8198 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttttggaattctg 8297  T
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcga 203  Q
     ||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||| | |||||| ||    
T  8298 gcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggttttgcgaccttcgttgcacgagttgttga 8397  T
Q  204 gag 206  Q
    |||    
T  8398 gag 8400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 151; Significance: 4e-80; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 23964 - 24169
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| ||| ||    
T  23964 cttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaa-attgtagaatgaaacttgtgggat 24062  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| | |||||    
T  24063 tctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttagattttgcgacctttgttgcacgagttg 24162  T
Q  200 tcgagag 206  Q
    |||||||    
T  24163 tcgagag 24169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 64199 - 64150
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  64199 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 64150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 151; Significance: 4e-80; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 2310 - 2104
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  2310 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 2211  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| |||||| ||||||| ||||||| ||||||||||  |||||||||| |||||||||||||| |||||||||||| | |||||    
T  2210 tctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgttagattttgtgacctttgttgcacgagttg 2111  T
Q  200 tcgagag 206  Q
    |||||||    
T  2110 tcgagag 2104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 207181 - 207324
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| | |||||||||||||| | ||     
T  207181 cttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaa 207279  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  207280 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 119214 - 119255
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  119214 ttagatgattttgagtgcctgaatatgtataataatgattag 119255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 4e-80; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 23390158 - 23390364
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  23390158 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 23390257  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| |||||| ||||||| ||||||| ||||||||||  |||||||||| |||||||||||||| |||||||||||| | |||||    
T  23390258 tctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgttagattttgtgacctttgttgcacgagttg 23390357  T
Q  200 tcgagag 206  Q
    |||||||    
T  23390358 tcgagag 23390364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 24529680 - 24529488
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||    
T  24529680 cttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaggttgtagaatgaaacttttggaat 24529581  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||    
T  24529580 tctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgc 24529488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 21985809 - 21986015
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||    
T  21985809 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatt-tagaatgaaacttttggaat 21985907  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| | ||||    
T  21985908 tctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 21986007  T
Q  199 gtcgagag 206  Q
    || |||||    
T  21986008 gttgagag 21986015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 9078406 - 9078211
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac-ttttggattctga 104  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||||||| ||||| |||||||    
T  9078406 atgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaaagatt-tagaatgaaaccttttgaattctga 9078308  T
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| || ||||||||    
T  9078307 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgt 9078211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 13095953 - 13095762
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||| ||    
T  13095953 cttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatt-tagaatgaaacttgtgggat 13095855  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  13095854 tctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgc 13095762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 24494027 - 24493821
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac-ttttggat 99  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  24494027 cttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt-tagaatgaaactttttggat 24493929  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||| ||||||| | |||||||||||||||||| | ||||    
T  24493928 tctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 24493829  T
Q  199 gtcgagag 206  Q
    || |||||    
T  24493828 gttgagag 24493821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 1096926 - 1096726
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat- 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| ||||||||      
T  1096926 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattgcagaatgaa-cttttggaaa 1096828  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag-attttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||| || ||| || ||||||    
T  1096827 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttttagaattttgcgatctctgtcgcacaagtt 1096728  T
Q  199 gt 200  Q
    ||    
T  1096727 gt 1096726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 13025769 - 13025578
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||| ||    
T  13025769 cttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatt-tagaatgaaacttgtgggat 13025671  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  13025670 tctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgc 13025578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21292643 - 21292834
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||           | |||||| |||| |    
T  21292643 cttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggaat 21292731  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| | |||||    
T  21292732 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgactttttagattttgcgacctttgttgcacgagttg 21292831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 25421991 - 25421785
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| || ||||||||||||| |||||||||||||| || |     
T  25421991 cttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttaggatgagattggacctggaaagatt-tagaatgaaactttcggaaa 25421893  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||| | ||||    
T  25421892 tctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttgttaggattttgcgacctttgttgcacgagtt 25421793  T
Q  199 gtcgagag 206  Q
    || |||||    
T  25421792 gttgagag 25421785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 25431853 - 25431647
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| || ||||||||||||| ||||||||||||||||| |     
T  25431853 cttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacctggaaagatt-tagaatgaaacttttggaaa 25431755  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||  ||||| ||||||| |||||||||||||||||| | | ||||    
T  25431754 tctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaaatcgagtgccttgttaggattttgcgacctttgttacacgagtt 25431655  T
Q  199 gtcgagag 206  Q
    || |||||    
T  25431654 gttgagag 25431647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 8286515 - 8286710
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  8286515 cttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 8286603  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  8286604 tctgacctaaactagccatggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcttgagttg 8286703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22075467 - 22075278
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||           |||||||| || | |    
T  22075467 cttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacctggaa-----------tgaaacttgtgaggt 22075379  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgacttgttagattttgcgacctttgttgctcaagtt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||||    
T  22075378 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaacagagtgacttgttag-ttttgcgacctttgttgcacgagtt 22075280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 11580907 - 11581058
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||| |||||||  || |    
T  11580907 cttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaactttgagaat 11581006  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccca 152  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11581007 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccca 11581058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 36154490 - 36154639
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||| |||||| |||||||  || |    
T  36154490 cttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctggatagattttagaataaaactttgagaat 36154589  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 150  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  36154590 ctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacc 36154639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22119855 - 22119998
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| | ||     
T  22119855 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaa 22119953  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  22119954 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 22119998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 22107047 - 22107241
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-att 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||           | |||||| ||| |||    
T  22107047 ttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctgaaa-----------ttaaacttgtgggatt 22107135  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgt 200  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| |||||| ||||| | | ||||||||||||||||| | ||||||    
T  22107136 ctgacctgaactcaccatggcgagcagaggctctcgcctcgcgagtgacccggaaatagagtgccttgtgatactttgcgacctttgttgcacgagttgt 22107235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 21871233 - 21871377
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||||||| | |||||  ||||||| |||    
T  21871233 cttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtgat 21871331  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||| |||||||| |||||| |||||||| || ||||||||    
T  21871332 tctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21871377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 21875513 - 21875657
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||||||| | |||||  ||||||| |||    
T  21875513 cttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtgat 21875611  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||| |||||||| |||||| |||||||| || ||||||||    
T  21875612 tctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21875657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 24766999 - 24767142
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||||| | |||||||||||||| | ||     
T  24766999 cttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagact-tagaatgaaactttggagaa 24767097  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| ||||||||| || |||||||||||||||||||||||||||    
T  24767098 tctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 24767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 19660499 - 19660643
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg--ga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||||| | ||||||||||  ||||  ||    
T  19660499 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaaagact-tagaatgaaaactttggaga 19660597  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
     ||| ||| |||||||||| |||||||||||||||||||||||||||    
T  19660598 atctaacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 19660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 21566003 - 21565863
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||||||||| |||||||||  ||  || ||    
T  21566003 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttcgtgaat 21565904  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcg 141  Q
    | | |||||||||||||| |||||||||||||||||||||||    
T  21565903 tgt-acctgaactcgccatggcgagcagaggctctcgcctcg 21565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22959195 - 22959339
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||| ||| | ||||||| || |||||        
T  22959195 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatg-aatttttgtgaa 22959293  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  22959294 ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 19669359 - 19669219
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||| ||  | |||||| ||||| |||||||| | |||||||||  ||||| ||     
T  19669359 cttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactttagaatgaattttttgtgaa 19669260  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctc 140  Q
    |   |||||||||||||| |||| | |||||||||||||||    
T  19669259 ttgtacctgaactcgccatggcgtgtagaggctctcgcctc 19669219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 22144508 - 22144364
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattc 101  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||| | |||  ||||| |||||||||||  |||  |||||| |  ||| ||| |     
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggatttttgggagtt 22144409  T
Q  102 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
      ||||||||||||||  ||||| |||||||||||||||||||||    
T  22144408 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 22144364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 5888837 - 5888981
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||| ||||| |||||   ||  |||||||| ||||  || |    
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatctttgtgagt 5888936  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
       |||||||||||||| |||||| ||||||||||||||||||||    
T  5888937 tgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 5888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 21329157 - 21329300
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||||||||||||||||| | |||||||| ||||| | |||  ||||| |||||||||||  |||   |||||||  ||| ||| |    
T  21329157 cttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataatttaggaatgaatttttgggagt 21329256  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
       || |||||||||||  ||||| |||||||||||||||||||    
T  21329257 tgcacttgaactcgccatagcgagtagaggctctcgcctcgcga 21329300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 21498683 - 21498752
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||| |||||||||||||||||||| ||||||| ||||||| ||| |||||  ||||| |||||||||||    
T  21498683 gatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctggaa 21498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 20026526 - 20026568
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  20026526 ttagatgattttgagtgcctgaacatgtataataatgattagg 20026568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 21501919 - 21501968
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 153  Q
    ||||||||||||||  ||||| ||||||||||||||||||||| ||||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag 21501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  106 ctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 41294112 - 41294176
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||| ||| || |||||||||| ||||||||||| ||| ||||||    
T  41294112 gatgccttagagtgcctgaacatgcctagtattgattaggaatgaatgtaggatcagattgaacc 41294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 19472493 - 19472528
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19472493 actcgccacggcgagcagatgctctcgcctcgcgag 19472528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 19992305 - 19992258
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  19992305 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 19992258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 20296180 - 20296145
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20296180 actcgccacggcgagcagatgctctcgcctcgcgag 20296145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 21294947 - 21295006
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  21294947 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21295006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 22334501 - 22334548
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  22334501 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 22334548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 31342453 - 31342414
Alignment:
Q  106 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  31342453 ctgaactcgccatggcgagcagatgctctcgcctcgcgag 31342414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 15441638 - 15441684
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  15441638 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 15441684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 25406847 - 25406789
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  25406847 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 25406789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 25535409 - 25535351
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  25535409 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 25535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 145
Target Start/End: Complemental strand, 25744074 - 25744036
Alignment:
Q  107 tgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  25744074 tgaactcgccatggcgagtagaggctctcgcctcgcgag 25744036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 26732421 - 26732463
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26732421 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26732463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 26740234 - 26740276
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26740234 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26740276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 14359504 - 14359549
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  14359504 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 14359549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 20232896 - 20232847
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  20232896 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 20232847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 21340527 - 21340576
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  21340527 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 21340576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 21741308 - 21741345
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcg 141  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  21741308 acctgaactcgccatggcgagtagaggctctcgcctcg 21741345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 22177807 - 22177848
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||| ||||||||||||||| |||| ||||||||||||||    
T  22177807 tagatgattttgagtgcctgaatatgtataataatgattagg 22177848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 22588516 - 22588459
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaac 68  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| |||||    
T  22588516 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaac 22588459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 23201725 - 23201680
Alignment:
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||||    
T  23201725 tctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 23201680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 23336973 - 23337018
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  23336973 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 23337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 23535353 - 23535398
Alignment:
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||| || |||||||| |||||||||| ||||||||||||||||    
T  23535353 tctgacttgtactcgccatggcgagcagatgctctcgcctcgcgag 23535398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 24532808 - 24532857
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  24532808 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 24532857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 25574056 - 25574097
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25574056 ttagatggttttgagtgcctgaacatgtataagaatgattag 25574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 25575249 - 25575290
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25575249 ttagatggttttgagtgcctgaacatgtataagaatgattag 25575290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 25576442 - 25576483
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattag 43  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25576442 ttagatggttttgagtgcctgaacatgtataagaatgattag 25576483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 26665891 - 26665940
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  26665891 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 26665940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 26937488 - 26937537
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  26937488 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 26937537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 27517179 - 27517126
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    ||||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  27517179 gatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 27517126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 27523816 - 27523763
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    ||||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  27523816 gatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 27523763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 123074 - 123114
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  123074 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 123114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 17284494 - 17284430
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  17284494 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 17284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 149; Significance: 7e-79; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 40313 - 40109
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattct 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  40313 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaaagattgtagaatgaaacttttggtttct 40214  T
Q  103 gacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgtc 201  Q
     ||||| |||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||| |||||||||||||||||||| ||| ||||     
T  40213 aacctgtactcgccacggcgagcagaggctctcgcctcgcgggtgacctagaaaccgagtgccttgttatgattttgcgacctttgttgcacaatttgtt 40114  T
Q  202 gagag 206  Q
    |||||    
T  40113 gagag 40109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 26662 - 26555
Alignment:
Q  23 aacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattctgacctgaactcgccacggcg 122  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaacttttggattctgacctgaagtcgccacggcg 26563  T
Q  123 agcagagg 130  Q
    ||||||||    
T  26562 agcagagg 26555  T

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Target: scaffold0026; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39593 - 39680
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatga 88  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  39593 cttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagaatgtagaatga 39680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 59179 - 59308
Alignment:
Q  15 agtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gattctgacctgaactc 113  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||| ||||| | |||||||||| ||| | ||  |||||| ||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaacctgacc-gaactc 59276  T
Q  114 gccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| |||||||||||||||||||||||||||    
T  59277 gccatggcgagcagaggctctcgcctcgcgag 59308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 26213 - 26163
Alignment:
Q  142 cgagtgacccagaaacagagtgacttgttag-attttgcgacctttgttgc 191  Q
    ||||||||||||||||  |||| |||||||| |||||||||||||||||||    
T  26213 cgagtgacccagaaaccaagtgccttgttaggattttgcgacctttgttgc 26163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 25727 - 25918
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||| | | |    
T  25727 cttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaatttttggaaat 25826  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  25827 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgc 25918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 33156 - 33338
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |     
T  33156 cttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattttagaatgaaacttttggaag 33255  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcga 181  Q
    ||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||    
T  33256 tcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaaacagagtgccttgtcaggattttgcga 33338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 16877 - 17083
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||    
T  16877 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatt-tagaatgaaacttttggaat 16975  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||| | ||||    
T  16976 tctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtaccttattaggattttgcgacctttgttgcacgagtt 17075  T
Q  199 gtcgagag 206  Q
    || |||||    
T  17076 gttgagag 17083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 79024 - 79096
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctgga 73  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||| |||||| ||||||||||    
T  79024 cttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 1e-77; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 22779889 - 22780095
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  22779889 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggat 22779988  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||| | |||||| ||||| |||||||||||| |||||||    
T  22779989 tctgacctaaactcgccacggcaagcaaaggctctcgcctcgcgagtaacctagaaacagagtgtcctgttaggttttgtgacctttgttgcacaagttg 22780088  T
Q  200 tcgagag 206  Q
     ||||||    
T  22780089 ccgagag 22780095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 29060999 - 29060808
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat- 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||      
T  29060999 cttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaa 29060901  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  29060900 tctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgc 29060808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19303203 - 19303402
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||||||||||| |     
T  19303203 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaa 19303301  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| || ||| || ||||||    
T  19303302 tctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 19303401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 18409489 - 18409680
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| || |    
T  18409489 cttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagatt-tagaatgaaactttttgaat 18409587  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  18409588 tctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaaacagagtgccttgttaggattttacgacctttgttgc 18409680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 20637956 - 20638151
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  20637956 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 20638044  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||    
T  20638045 tctgacctgaactcgccacggcgagcaaaggctctcacctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagttg 20638144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 18821492 - 18821687
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||           |||||||| ||| ||    
T  18821492 cttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 18821580  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  18821581 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttg 18821680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 17287458 - 17287664
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| | ||||    
T  17287458 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacctggaaagattgtagaatgaaacttgtgggat 17287557  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||| |||||||||||||||  ||||||||| | |||| ||||||||||||||||||||| ||||||||  ||||| | ||||||||| | |||||    
T  17287558 tctgacctaaactcgccacggcgattagaggctcttgtctcgtgagtgacccagaaacagagtgtcttgttagggtttgctatctttgttgcacgagttg 17287657  T
Q  200 tcgagag 206  Q
    | |||||    
T  17287658 ttgagag 17287664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 20360633 - 20360822
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  20360633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 20360721  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  20360722 tctgacctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgacttgttaggttttgcgacctttgttgcacgagttg 20360821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 20594232 - 20594032
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat- 99  Q
    |||||||| |||||||||||| |||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||      
T  20594232 cttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacctggaaagattgtagaat-aaacttttggaaa 20594134  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| || ||| || ||||||    
T  20594133 tctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 20594034  T
Q  199 gt 200  Q
    ||    
T  20594033 gt 20594032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 29808545 - 29808691
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaaga-ttgtagaatgaaacttttggat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| || |||||||||||||| |||     
T  29808545 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaa 29808644  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29808645 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 28496135 - 28496280
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| | |||||||||||||||| ||     
T  28496135 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagact-tagaatgaaacttttgagaa 28496233  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  28496234 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16920306 - 16920486
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| || ||||||||           | |||||| |||| |    
T  16920306 cttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacctggaa-----------ttaaacttatggaat 16920394  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16920395 tctgacctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccagaaacaaagtgacttgttggattttgcgacctttgttgc 16920486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25629017 - 25629217
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||| | || || |||| ||||| |||| |||||||||||||| | ||||| |||||| |||||||||||| ||| |||||| ||||||||| |||    
T  25629017 cttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacctggaaatattttagaat-aaacttttgtgat 25629115  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    | ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| | ||||    
T  25629116 tatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacttttgttgcacgagtt 25629215  T
Q  199 gt 200  Q
    ||    
T  25629216 gt 25629217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 11185950 - 11185770
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| |||||||||||||||||||| |||| |||||||  |||| ||||||| |||| |||||||||||           | |||||| ||| ||    
T  11185950 cttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacctggaa-----------ttaaacttatgggat 11185862  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    ||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11185861 tctaacctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccagaaacatagtgacttgttagattttgcgacctttgttgc 11185770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 22831950 - 22831773
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||  ||||||||||||||| |||||||  |||||| ||||| |||| |||||||||||      || | |||     | |||||    
T  22831950 cttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatataggacgagattgaacctggaat-----taaactga-----tgggatt 22831861  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgt 188  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  22831860 ctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaacagagtgacttgttggattttgcgacctttgt 22831773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18457173 - 18457029
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||   |||  ||||||||  |||||||      
T  18457173 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttggaag 18457075  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||    
T  18457074 ctgacctgaactagccatggcgagtagaggctctcgcctcgcgagt 18457029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 25611385 - 25611530
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac--ttttgga 98  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  ||||| || |||||| || ||||||||||| | |||||||||||   || |||    
T  25611385 cttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacctggaaagact-tagaatgaaacaacttagga 25611483  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||    
T  25611484 ttctgacctgaactcgccatggagagcagaggctctcgcctcgcgag 25611530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 1561762 - 1561622
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatg-aaacttttg-ga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| | | ||||||| ||||||||| ||    
T  1561762 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaact-tagaatgaaaacttttgaga 1561664  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcg 141  Q
     ||||||| ||||| ||||||||||||| ||||||||||||||    
T  1561663 atctgacc-gaacttgccacggcgagcataggctctcgcctcg 1561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 21939842 - 21939699
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||  |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||||||||| | |||||| ||||||| | ||     
T  21939842 cttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcctggaaagact-tagaataaaactttggagaa 21939744  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  21939743 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 21939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 15894092 - 15894237
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaact--tttgga 98  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||  ||||||| ||||||| || ||||||||||| | ||||||||||    || |||    
T  15894092 cttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaagact-tagaatgaaagaacttggga 15894190  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  15894191 ttctgacctgaactcgccatggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19652654 - 19652512
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttt-tggat 99  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||||||| | |||||||||  ||| || ||    
T  19652654 cttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactttagaatgaatttttgtgaat 19652555  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcg 143  Q
    | | |||||||||||||| |||||| ||||||||||||||||||    
T  19652554 tgt-acctgaactcgccatggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 4667875 - 4668019
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||| || ||||||||||| | ||||||| || |||||        
T  4667875 cttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatg-aatttttgtgaa 4667973  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  4667974 ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4668019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 27332946 - 27333089
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||| | ||| |||||  |||||||||||||||| |||||||||  |||  || |    
T  27332946 cttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatgaagttttgtgagt 27333045  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
       |||||||||||||| |||||| |||||||||||||||||||    
T  27333046 tgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 27393686 - 27393829
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||| | ||| |||||  |||||||||||||||| |||||||||  |||  || |    
T  27393686 cttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatgaagttttgtgagt 27393785  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 144  Q
       |||||||||||||| |||||| |||||||||||||||||||    
T  27393786 tgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 4185485 - 4185629
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||  ||||| |||||||||||||| | ||||||| || |||||        
T  4185485 cttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagtttagaatg-aatttttgtgaa 4185583  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  4185584 ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 25603057 - 25603188
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac--ttttggattctgacctg 108  Q
    |||||||||||||||||||||||||||||||||||  ||||| | ||||||| || ||||||||||| | |||||||||||   || |||||||||| ||    
T  25603057 tttgagtgcctgaacatgtctaataatgattaggagtgaatgcatgatgagattggacctggaaagact-tagaatgaaacaacttaggattctgacttg 25603155  T
Q  109 aactcgccacggcgagcagaggctctcgcctcg 141  Q
    ||||| ||| |||||||||||||||||||||||    
T  25603156 aactcaccatggcgagcagaggctctcgcctcg 25603188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4189415 - 4189271
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||| || ||||||||||| | ||||||| || |||||        
T  4189415 cttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatg-aatttttgtgaa 4189317  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| |||| |||||| || |||||| ||||||||||||||||||||    
T  4189316 ctgaacctaaactcgtcatggcgagtagaggctctcgcctcgcgag 4189271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 4674722 - 4674866
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||| || ||||||||||| | ||||||| || |||||        
T  4674722 cttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatg-aatttttgtgaa 4674820  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| |||| |||||| || |||||| ||||||||||||||||||||    
T  4674821 ctgaaccttaactcgtcatggcgagtagaggctctcgcctcgcgag 4674866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 23019866 - 23019721
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| | |||  ||||| |||||||||||   ||  ||||||||  ||| ||| |    
T  23019866 cttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctggaatattttaagaatgaatttttgggagt 23019767  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
       |||||||||||||| |||||| |||||| || |||||||||||    
T  23019766 tacacctgaactcgccatggcgagtagaggcccttgcctcgcgagt 23019721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31155060 - 31155137
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagat 78  Q
    |||||||||||||||||||||||| | ||||||||| |||| ||||||||||||| |||||| |||||||||||||||    
T  31155060 cttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22334544 - 22334699
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaa---ctt---- 93  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||  ||||||| ||||||| || ||||||||| | | ||||||||||   |||        
T  22334544 cttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaatact-tagaatgaaataacttgaaa 22334642  T
Q  94 -----ttggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
         | |||||||||||| ||||||||| || ||||||| ||||||||||||||||    
T  22334643 taacttgggattctgacctaaactcgccatggtgagcagatgctctcgcctcgcgag 22334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22080399 - 22080543
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||| |  ||  | ||| |||||||||||   ||  |||| |||  | | ||| |    
T  22080399 cttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacgaacttatgggagt 22080498  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
       |||||||||||||| |||||| ||||||||||||||||||||    
T  22080499 tatacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 145
Target Start/End: Original strand, 25641953 - 25641991
Alignment:
Q  107 tgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  25641953 tgaactcgccacggcgagcagatgctctcgcctcgcgag 25641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 31164531 - 31164581
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaga 62  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||||||||||    
T  31164531 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggatgaga 31164581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 8244193 - 8244158
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8244193 actcgccacggcgagcagatgctctcgcctcgcgag 8244158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 11567195 - 11567160
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11567195 actcgccacggcgagcagatgctctcgcctcgcgag 11567160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 19870923 - 19870888
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19870923 actcgccacggcgagcagatgctctcgcctcgcgag 19870888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 22331862 - 22331803
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  22331862 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 22331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 22863278 - 22863243
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22863278 actcgccacggcgagcagatgctctcgcctcgcgag 22863243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 23395401 - 23395366
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23395401 actcgccacggcgagcagatgctctcgcctcgcgag 23395366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 1538628 - 1538686
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  1538628 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 1544727 - 1544785
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  1544727 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1544785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 20109673 - 20109631
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| || ||||||||||||||||| ||||||||||||||    
T  20109673 ttagatgattctgagtgcctgaacatgtataataatgattagg 20109631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 30694784 - 30694738
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    ||||||||||||||||| ||| || |||||||||| |||||||||||    
T  30694784 ttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 30694738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 12496654 - 12496605
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  12496654 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 12496605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 14099049 - 14099004
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 56  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  14099049 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 14099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 14472692 - 14472647
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 56  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  14472692 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 14472647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 16372280 - 16372235
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    |||||||||||||||| |||| ||||||||||| | ||||||||||    
T  16372280 ttgagtgcctgaacatatctagtaatgattagggatgaatgtagga 16372235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 16924642 - 16924687
Alignment:
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||||    
T  16924642 tctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 16924687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 16929357 - 16929402
Alignment:
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||||    
T  16929357 tctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 16929402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 31155163 - 31155204
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||| ||| |||||||||||||||||||||||||||    
T  31155163 acctgtactctccatggcgagcagaggctctcgcctcgcgag 31155204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 19668728 - 19668688
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 19668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 23657189 - 23657229
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  23657189 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 23657229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 27327735 - 27327787
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  27327735 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 27327787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 27388475 - 27388527
Alignment:
Q  6 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 58  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  27388475 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 27388527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 5783 - 5989
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||| | |||||||| ||  || ||    
T  5783 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgggaagattattgaatgaaatttgcgggat 5882  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||     
T  5883 tctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagtta 5982  T
Q  200 tcgagag 206  Q
    |||||||    
T  5983 tcgagag 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 8934 - 8728
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||||| ||| ||    
T  8934 cttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacctagaaagattgtaaaatggaacttgtgggat 8835  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||| | |||||    
T  8834 tctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaaacagagtgtcttgttaggttttgcgacctttgttgcacgagttg 8735  T
Q  200 tcgagag 206  Q
    | |||||    
T  8734 ttgagag 8728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 339613 - 339803
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||| |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||| ||| |    
T  339613 cttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgggaat 339712  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  339713 ctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgccttgttaggttttgcgacctttgttgc 339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 722 - 917
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||           ||| |||||||| ||| ||    
T  722 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct-----------agattgaaacttgtgggat 810  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||    
T  811 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgaattg 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 10099 - 10294
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           | |||||| ||| ||    
T  10099 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggat 10187  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  10188 tctgacctgaactcgccacggggagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgaccattgttgcacgagttg 10287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 363 - 163
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |    
T  363 cttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt-tagaatgaaactttttgagt 265  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||| || ||| || ||||||    
T  264 tctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 165  T
Q  199 gt 200  Q
    ||    
T  164 gt 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 15140 - 15333
Alignment:
Q  3 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactttt-ggattc 101  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||           | |||||| | ||||||    
T  15140 tagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------taaaacttgtaggattc 15228  T
Q  102 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtc 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  15229 tgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttgtc 15328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 13659 - 13467
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||           |||||||| ||| ||    
T  13659 cttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa-----------tgaaacttgtggcat 13571  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| | |||||    
T  13570 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaatcagagtgccttgttagattttgcgacctttgttgcacgagttg 13471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 725 - 920
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||           | |||||| |||| |    
T  725 cttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggaat 813  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | | |||    
T  814 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccagaaacagagtgacttgttagattttgcaacctttgttgcacgatttg 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 40370 - 40165
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat- 99  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||| | ||||||||||||||| ||||||||      
T  40370 cttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacctg-acagattgtagaatgaa-cttttggaaa 40273  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagat-tttgcgacctttgttgctcaagtt 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||| | ||||    
T  40272 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggtgtttgcgacctttgttgcacgagtt 40173  T
Q  199 gtcgagag 206  Q
    || |||||    
T  40172 gttgagag 40165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 18415 - 18464
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  18415 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 18464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 23341 - 23135
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||  || ||| | |||    
T  23341 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaaagattgtagaattgaattttggaatt 23242  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttg 199  Q
    |||| |||| |||||||| |||||||||||| |||||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||| | |||||    
T  23241 ctgaactgagctcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagttg 23142  T
Q  200 tcgagag 206  Q
    | |||||    
T  23141 ttgagag 23135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 16261 - 16462
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||| | ||||||||| ||||| |     
T  16261 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaaagattttcgaatgaaacgtttggaaa 16360  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgctcaagtt 198  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||  |||||||||| || ||| || ||||||    
T  16361 tctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttgttgggattttgcgatctgtgtcgcacaagtt 16460  T
Q  199 gt 200  Q
    ||    
T  16461 gt 16462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 13943 - 13748
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||           | |||||| || |||    
T  13943 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctggaa-----------ttaaacttgtgagat 13855  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | |||||    
T  13854 tctgagctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgttagattttgcgacttttgttgcacgagttg 13755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 120; Significance: 1e-61; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 4967 - 4808
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaaga-ttgtagaatgaaacttttggat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| || |||||||||||||| |||     
T  4967 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaa 4868  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacag 159  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  4867 tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacag 4808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 12549 - 12390
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaaga-ttgtagaatgaaacttttggat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| || |||||||||||||| |||     
T  12549 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaa 12450  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacag 159  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  12449 tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacag 12390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22501 - 22342
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaaga-ttgtagaatgaaacttttggat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| || |||||||||||||| |||     
T  22501 cttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaa 22402  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacag 159  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  22401 tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacag 22342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 117; Significance: 8e-60; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 32512 - 32317
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||           | |||||| ||| ||    
T  32512 cttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctggaa-----------ttaaacttgtgggat 32424  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||| |||||    
T  32423 tctgacttgaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagttacttttttgattttgcgacctttgttgctctagttg 32324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 675 - 837
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||||||||| ||||||||| |     
T  675 cttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaatctgaaaagattgtagaatg-aacttttggaaa 773  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtg 163  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  774 tctgacctgaactcgccacggtgagcggaggctctcgcctcgcgagtgacccagaaacagagtg 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 116; Significance: 3e-59; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 16539 - 16340
Alignment:
Q  8 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattctgacct 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||  || ||| | ||||||| ||    
T  16539 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaaagattgtagaattgaattttggaattctgaact 16440  T
Q  108 gaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgtcgagag 206  Q
    || ||||||||||||| ||||||| ||| |||||| |||||||||||||||||| | ||||||| | |||||||||||||||||| | |||||| |||||    
T  16439 gagctcgccacggcgatcagaggccctcacctcgcaagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagag 16340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 32621 - 32802
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || || || |||||| |||||||| ||||||| |||||||||  |||  || |    
T  32621 cttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaatttttgtgagt 32720  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcga 181  Q
       |||  |||||||||| ||||| |||||||| |||||||||||||||||| ||||||| || ||||||| ||||||||||    
T  32721 tgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcga 32802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 46384 - 46203
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || || || |||||| |||||||| ||||||| |||||||||  |||  || |    
T  46384 cttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaatttttgtgagt 46285  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcga 181  Q
       |||  |||||||||| ||||| |||||||| |||||||||||||||||| ||||||| || ||||||| ||||||||||    
T  46284 tgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcga 46203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 1740 - 1891
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| | | |    
T  1740 cttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttggaaat 1838  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 153  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  1839 ctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccag 1891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 11186 - 11381
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  11186 cttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 11274  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
     ||||||||||||||||| |||||| |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | |||||    
T  11275 actgacctgaactcgccaaggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgttagattttgcgacctttgttgcacgagttg 11374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14098 - 14055
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  14098 cttagatgattttgagtgcctgaatatgtataataatgattagg 14055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 52023 - 51833
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-attctg 103  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||           ||||||||  || |||||     
T  52023 gatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctggaa-----------tgaaacttacgggattcta 51935  T
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcga 203  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  51934 acctgagctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacttttgttgcacgagttgtcga 51835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 20571 - 20426
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-t 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||| |    
T  20571 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaaagatt-tagaatgaaacttttggagt 20473  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  20472 tctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagt 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 2400 - 2205
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||           | ||||||  || ||    
T  2400 cttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacctggaa-----------ttaaacttgagggat 2312  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | |||||    
T  2311 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacatgttagattttgcgacctttgttgcacgagttg 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 7058 - 6863
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||           | ||||||  || ||    
T  7058 cttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacctggaa-----------ttaaacttgagggat 6970  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| | |||||    
T  6969 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgacatgttagattttgcgacctttgttgcacgagttg 6870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 15277 - 15426
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||| |||| ||||| ||||| |||||||||||||| ||| |    
T  15277 cttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctggatagattttagaatgaaactttgggaat 15376  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 150  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  15377 ctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagtgacc 15426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17239 - 17090
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||| |||||||  || |    
T  17239 cttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaactttgagaat 17140  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 150  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17139 atgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacc 17090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 7471 - 7576
Alignment:
Q  39 attaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat--tctgacctgaactcgccacggcgagcagaggctctcg 136  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||  ||||| |||||||||||| ||| ||||||||||||||    
T  7471 attaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaac-tttggataatctga-ctgaactcgccatggcaagcagaggctctcg 7567  T
Q  137 cctcgcgag 145  Q
    |||||||||    
T  7568 cctcgcgag 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 17670 - 17794
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||||    
T  17670 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaacttgtgggat 17769  T
Q  100 tctgacctgaactcgccacggcgag 124  Q
    |||||||||||||||||||||||||    
T  17770 tctgacctgaactcgccacggcgag 17794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 17797 - 17854
Alignment:
Q  148 acccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgaga 205  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| | |||||| ||||    
T  17797 acccagaaatagagtgacttgttaggttttgcgacctttgttgcacgagttgttgaga 17854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 4804 - 4999
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||        ||||| ||| ||    
T  4804 cttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa---ttg--------aacttatgggat 4892  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||  | ||||||||| |||||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||| | |||||    
T  4893 tctgacctgaactcgccaaagagagcagaggatctcgcctcgcgagtgacacagaaacagagtgacttattggattttgagacctttgttgcacgagttg 4992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5296 - 5108
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||           |||||||| || | |    
T  5296 cttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgaggt 5208  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||| | |||||    
T  5207 tctgacctgaactcgccacggcgagtagaggctcttgcctcgcgagtgacctagaaacagagtgacttgttag-ttttgccacctttgttgcacgagttg 5109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 384 - 191
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||           | |||||| ||| ||    
T  384 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaa-----------ttaaacttgtgggat 296  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttaga-ttttgcgacctttgttgctcaagtt 198  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| |||||| ||||||||||| | ||||    
T  295 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagtt 196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 5160 - 4967
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||           | |||||| ||| ||    
T  5160 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaa-----------ttaaacttgtgggat 5072  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttaga-ttttgcgacctttgttgctcaagtt 198  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| |||||| ||||||||||| | ||||    
T  5071 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagtt 4972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 102; Significance: 7e-51; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 16727 - 16547
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||           | |||||| ||| ||    
T  16727 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctgaaa-----------ttaaacttatgggat 16639  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
    | ||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  16638 tttgaccagaactcggcacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttggattttgtgacctttgttgc 16547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 1362 - 1167
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  1362 cttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 1274  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||||| |||||| |||| ||||| ||| ||||||||||||||||| | |||||    
T  1273 tctgaccagaactcgccatggcgagcagaggctctcgcctcacgagtgacccggaaacaaagtgccttgtgagactttgcgacctttgttgcacgagttg 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 97; Significance: 7e-48; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3929 - 3734
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  3929 cttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 3841  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||| | |||||    
T  3840 tctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgagactttgtgacctttgttgcacgagttg 3741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 7993 - 7798
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    ||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||           |||||||| ||| ||    
T  7993 cttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaa-----------tgaaacttgtgggat 7905  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||| | |||||    
T  7904 tctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgagactttgtgacctttgttgcacgagttg 7805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 27305 - 27347
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  27305 ttagatgattttgagtgcctgaacatgtataataatgattagg 27347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 47434 - 47239
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgg-at 99  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||           | |||||| ||| ||    
T  47434 cttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggat 47346  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttg 199  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||||| || |||||||||||||||||  | |||||||||||||| | |||||    
T  47345 tctgacctgagctcgccacggagcgcagaggctctcgcctcgcgagtgacccaaaaccagagtgacttgttagaaatggcgacctttgttgcacgagttg 47246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 2107 - 2250
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||||| ||| | ||     
T  2107 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaa 2205  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  2206 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18620 - 18712
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18620 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaactt 18712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 12471 - 12611
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||   |||||||||||||| | ||     
T  12471 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaga-catagaatgaaactttggagaa 12569  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgc 142  Q
    ||||| |||||||||||| ||||||||||||||||||||||||    
T  12570 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgc 12611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 624 - 816
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaactt-ttgg-a 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||    | |  |||||||||||| |||| |    
T  624 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctgg-tttagtagagaatgaaacttgttggaa 722  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgc 191  Q
     |||||||||||||||||| |||||||||||| || ||||||| |||||||| |||||||||| | ||||||| |||||| |||||||||||||    
T  723 atctgacctgaactcgccatggcgagcagaggttcccgcctcgtgagtgacctagaaacagagagtcttgttaggatttttcgacctttgttgc 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 7956 - 8099
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| | ||     
T  7956 cttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaa 8054  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| | | |||||||||| |||||||||||||||||||||||||||    
T  8055 tct-aacagaactcgccatggcgagcagaggctctcgcctcgcgag 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 53134 - 53176
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||||||||||||||| || ||||||||||||||    
T  53134 ttagatgattttgagtgcctgaacaagtataataatgattagg 53176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 80005 - 80137
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gattctgacctgaa 110  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| | || ||||| |||||    
T  80005 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaa 80102  T
Q  111 ctcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| || |||||||||||||||||||||||||||    
T  80103 ctcgacatggcgagcagaggctctcgcctcgcgag 80137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 133112 - 132967
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||||||| | |||||||||| |||||        
T  133112 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaa-ttttgtgaa 133014  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  133013 ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 58492 - 58527
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  58492 actcgccacggcgagcagatgctctcgcctcgcgag 58527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 28942 - 29081
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| | |||||||||| ||| | ||     
T  28942 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagact-tagaatgaaaatttagagaa 29040  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcg 141  Q
    ||||||| ||||| |||| |||||||||||||||||||||||    
T  29041 tctgacc-gaactagccatggcgagcagaggctctcgcctcg 29081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 10369 - 10226
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||| |||||||||| || |||||||||||||||||||||||||| |||||||||||||| | ||||| |||||||| | ||     
T  10369 cttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacctggaaagact-tagaaggaaactttggagaa 10271  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  10270 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 9496 - 9639
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||||| | |||||||||||||| | ||     
T  9496 cttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagact-tagaatgaaactttggagaa 9594  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||| ||||||||| || |||||||||||||||||||||||||||    
T  9595 tctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 19725 - 19573
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || || || |||||| |||||||||||||||| |||||||||  |||  |  |    
T  19725 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattttagaatgaatttttatgtgt 19626  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 153  Q
       |||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  19625 tgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccag 19573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 580 - 437
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattctgacctga 109  Q
    |||||||||||| ||||||||||||||||||||||||||| || || |||||| ||||| |||||||||| |||||||||  |||  || |   ||||||    
T  580 ttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattttagaatgaatttttgtgagttgcacctga 481  T
Q  110 actcgccacggcgagcagaggctctcgcctcgcgagtgacccag 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  480 actcgccatggcgagcagaggctctcgcctcgcgagtgacccag 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 24313 - 24456
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggat- 99  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| |||||| | ||||||||||| |||||||     
T  24313 cttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacctagaaagact-tagaatgaaac-tttggata 24410  T
Q  100 -tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
     ||||| |||||||||||| |||||||||||||||||||||||||||    
T  24411 atctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 1733 - 1539
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-tt 100  Q
    ||||||||||||| |||||||||||||||||||| |||||||  || |  |||||| | || |||||||||||           | |||||| |||| ||    
T  1733 ttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtaggacgtgattgaacctggaa-----------ttaaacttatggaatt 1645  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgt 200  Q
    || | |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| | ||||||    
T  1644 ctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttggagtttgcgacctttgttgcacgagttgt 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 7710 - 7516
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-tt 100  Q
    ||||||||||||| |||||||||||||||||||| |||||||  || |  |||||| | || |||||||||||           | |||||| |||| ||    
T  7710 ttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtaggacgtgattgaacctggaa-----------ttaaacttatggaatt 7622  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgt 200  Q
    || | |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| | ||||||    
T  7621 ctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttggagtttgcgacctttgttgcacgagttgt 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 4982 - 4782
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg--ga 98  Q
    ||||||||||||||||||||| |||||||||| |||||| |||| |||| ||||| |||||| |||||||| ||||||| ||||||||| ||||||  ||    
T  4982 cttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacctgaaaagattttagaatgaa-cttttgtcga 4884  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 197  Q
    | | ||||||  ||||||| |||||||| ||||||||||||||| ||  ||||||||||||| || | ||||| |||||||||||||||||||| | |||    
T  4883 t-cagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaaacagaatgccatgttaggattttgcgacctttgttgcacgagt 4785  T
Q  198 tgt 200  Q
    |||    
T  4784 tgt 4782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 10249 - 10200
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  10249 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 10200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 476 - 344
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gattctgacctgaa 110  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | | ||||||| |||||| | || ||||| |||||    
T  476 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaatact-tagaatggaactttggagaatctga-ctgaa 379  T
Q  111 ctcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| |||||||||||||||||||||||||||    
T  378 ctcgccatggcgagcagaggctctcgcctcgcgag 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 32542 - 32397
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||||||| | |||||||||| |||||        
T  32542 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaa-ttttgtgaa 32444  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  32443 ctgaacctgaactcgccatggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 200
Target Start/End: Complemental strand, 39864 - 39735
Alignment:
Q  72 gaaagattgtagaatgaaacttttggat-tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt 170  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  39864 gaaagattgtagaatgaa-cttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 39766  T
Q  171 a-gattttgcgacctttgttgctcaagttgt 200  Q
    | |||||||||| || ||| || ||||||||    
T  39765 aggattttgcgatctgtgtcgcacaagttgt 39735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 74948 - 75077
Alignment:
Q  72 gaaagattgtagaatgaaacttttgg-attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt 170  Q
    |||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  74948 gaaagattgtagaatg-aacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 75046  T
Q  171 a-gattttgcgacctttgttgctcaagttgt 200  Q
    | |||||||||| || ||| || ||||||||    
T  75047 aggattttgcgatctgtgtcgcacaagttgt 75077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 16117 - 15974
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||| |  | ||||||| ||| | ||     
T  16117 cttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-caaaatgaaaatttagagaa 16019  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  16018 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 10617 - 10422
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttgga-- 98  Q
    ||||||||||||||||||||| |||||| ||| || ||||||||||||||||       ||| |||||||||||||||| ||||||||||  |||  |      
T  10617 cttagatgcttttgagtgccttaacatgcctagtagtgattaggaaagaatg-------agattgaacctggaaagattttagaatgaaaaattttcaaa 10525  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 197  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||| |||| ||||||| |||||||||| || ||| || |||||    
T  10524 ttctgacctgaactcgccacggcgagcagagcttcccgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgatctgtgtcgcacaagt 10425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 21349 - 21179
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||           |||||||| |         
T  21349 cttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctggaa-----------tgaaacttgt----- 21266  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgc 191  Q
        ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||||    
T  21265 ----cctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaacagagtgacttgttgagttttgcgacctttgttgc 21179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2747 - 2826
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2747 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 2826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2465 - 2609
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| || || |||||  |||||||| ||||||| |||||||||| || || |      
T  2465 cttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaatttgtgaa-- 2562  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| |||||| |||||||||||||||||||||    
T  2563 ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 28223 - 28121
Alignment:
Q  67 acctggaaagattgtagaatgaaacttttgga-ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgac 165  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  28223 acctggaaagatt-tagaatgaaactttttgaattctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgcc 28125  T
Q  166 ttgt 169  Q
    ||||    
T  28124 ttgt 28121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28995 - 28924
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctgg 72  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  28995 cttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 28471 - 28616
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||   |||| | |||||||||| |||||        
T  28471 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagactttagaatgaaa-ttttgtgaa 28569  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  28570 ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 7270 - 7126
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||||||||| ||||||| || |||||        
T  7270 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aatttttgtgaa 7172  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| |||||||||||||| |||||| |||||||||||||| |||||    
T  7171 ctgaacctgaactcgccatggcgagtagaggctctcgccttgcgag 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 12387 - 12243
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| |||||| ||||||||||   |||  ||||||||  |||||||      
T  12387 cttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttggaaa 12289  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||    
T  12288 ctgacctgaactcgccatggcgagtagaggctctcacctcgcgagt 12243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 20088 - 20228
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||   |||  ||||||||  |||||||      
T  20088 cttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttggaag 20186  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgc 142  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  20187 ctgacctgaactcgccatggcgagtagaggctctcgcctcgc 20228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 9535 - 9391
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||| || ||||||||||| | ||||||| || |||||        
T  9535 cttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatg-aatttttgtgaa 9437  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  9436 ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 101853 - 101709
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||| ||| | |||||||||  || || | |    
T  101853 cttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaattttgtgaact 101754  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
     |||||||||||||||| |||||||||||||||| |||||| ||||    
T  101753 -tgacctgaactcgccatggcgagcagaggctcttgcctcgggagt 101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 45451 - 45596
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttg-gat 99  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| ||  | |||||| ||||||||| |||| | |||||||||  ||||| ||     
T  45451 cttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagactttagaatgaattttttgtgaa 45550  T
Q  100 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |   |||||||||||||| |||||| ||||||||||||||||||||    
T  45551 ttgtacctgaactcgccatggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13270 - 13340
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctg 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13270 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcctg 13340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 1963 - 2108
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||| || || |||||| ||||| |  ||||| | |||||||||| |||||        
T  1963 cttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaagactttagaatgaaa-ttttgtgaa 2061  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  2062 ctgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagt 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10603 - 10542
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaga 62  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10603 cttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaggatgaga 10542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 1e-24; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 161144 - 161000
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||| ||| | ||||||| || |||||        
T  161144 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatg-aatttttgtgaa 161046  T
Q  101 ctg-acctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| ||||||| |||||| |||||| |||||||||| |||| ||||    
T  161045 ctgaacctgaagtcgccatggcgagtagaggctctcacctcacgag 161000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 447007 - 446965
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  447007 ttagatgattttgggtgcctgaacatgtataataatgattagg 446965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 497938 - 497896
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  497938 ttagatgattttgtgtgcctgaacatgtataataatgattagg 497896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 6561 - 6625
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgt 169  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagagtgccttgt 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6490 - 6557
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaac 68  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6490 cttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 52; Significance: 5e-21; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 1038 - 897
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaac--ttttgga 98  Q
    ||||||||  |||||||||  |||||||||||||| |||||||||  ||||||| |||||||  | ||||||||||| | |||||||||||   || |||    
T  1038 cttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaagatgagataggacctggaaagact-tagaatgaaacaacttggga 940  T
Q  99 ttctgacctgaactcgccacggcgagcagaggctctcgcctcg 141  Q
    ||||| ||||||||||||| |||||||||| | ||||||||||    
T  939 ttctgccctgaactcgccatggcgagcagatgttctcgcctcg 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10230 - 10278
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 49  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  10230 cttagatgtttttgagtgcctgaacatgtctaataatgattagtaaaga 10278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 10305 - 10347
Alignment:
Q  104 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    ||||||||||||||  ||||| |||||||||||||||||||||    
T  10305 acctgaactcgccaaagcgagtagaggctctcgcctcgcgagt 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3391 - 3318
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || ||  ||||| |||||||||||    
T  3391 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggaa 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 10987 - 10842
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||   |||  ||||| |||||||||||   ||  ||||||||  |||  || |    
T  10987 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatgaatttttgtgagt 10888  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
       ||||||||||||||  ||||| |||||||||||||||||||||    
T  10887 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 49; Significance: 3e-19; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 13399 - 13255
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| || ||  | ||| |||||||||||   ||  ||||||||  |||  || |    
T  13399 cttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagtttaagaatgaatttttgtgagt 13300  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
       |||||||||||||| |||||| |||||| |||||||||||||    
T  13299 tgcacctgaactcgccatggcgagtagaggccctcgcctcgcgag 13255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 29892 - 29950
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  29892 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 29950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 41888 - 41946
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  41888 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 41946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2306 - 2378
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctgga 73  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| || ||  ||||| ||||||||||    
T  2306 cttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctgga 2378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 43446 - 43590
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||| | |||  ||||| |||||||||||   ||  |||||| |  ||| ||| |    
T  43446 cttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagt 43545  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
       ||||| |||||||| | |||| ||||||||||||||||||||    
T  43546 tacacctgtactcgccatgacgagtagaggctctcgcctcgcgag 43590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 47366 - 47439
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||| | |||  ||||| |||||||||||    
T  47366 cttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaa 47439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 45; Significance: 8e-17; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 130362 - 130222
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggattctga 104  Q
    |||| ||||||||||||||||||||||| | |||||||| ||||| | |||  ||||| |||||||||||   ||  |||||| |  ||| ||| |   |    
T  130362 gatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggaattaca 130263  T
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||| ||||||||| |||||||||||||||||||||||||||    
T  130262 cctaaactcgccatggcgagcagaggctctcgcctcgcgag 130222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 60301 - 60343
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| || ||||||||||||||||| ||||||||||||||    
T  60301 ttagatgattctgagtgcctgaacatgtataataatgattagg 60343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 60479 - 60520
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 60520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 242479 - 242434
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 56  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  242479 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 242434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 690 - 744
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 55  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  690 cttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtag 744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 7719 - 7864
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||||||   |||  ||||| ||||||| |||   ||  ||||||||  ||| ||  |    
T  7719 cttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatgaatttttgggggt 7818  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
       ||||||||||||||  ||||| |||||||||||||||||||||    
T  7819 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6052 - 5979
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| || ||  ||||| ||||| |||||    
T  6052 cttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaacttggaa 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 12453 - 12381
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||| | |||  ||||| |||||||||||    
T  12453 ttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaa 12381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 15492 - 15636
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||  ||||| |||||||||||   ||  |||||| |  ||| ||| |    
T  15492 cttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctggaatagtttaagaatggatttttcggaat 15591  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
       || ||||||||||| |||||| |||||| |||||||||||||    
T  15592 tacacatgaactcgccatggcgagtagaggccctcgcctcgcgag 15636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7072 - 6931
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||  | ||| |||||||||||   ||  |||||| |  ||| ||| |    
T  7072 cttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatggatttttgggaat 6973  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgc 142  Q
       |||||||||||||| |||||| |||||| ||||||||||    
T  6972 tacacctgaactcgccatggcgagtagaggccctcgcctcgc 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 14452 - 14311
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagattgtagaatgaaacttttggatt 100  Q
    |||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||  | ||| |||||||||||   ||  |||||| |  ||| ||| |    
T  14452 cttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatggatttttgggaat 14353  T
Q  101 ctgacctgaactcgccacggcgagcagaggctctcgcctcgc 142  Q
       |||||||||||||| |||||| |||||| ||||||||||    
T  14352 tacacctgaactcgccatggcgagtagaggccctcgcctcgc 14311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 6987 - 6923
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    ||||||||||||| |||||||||||||| ||||||||||| || ||  ||||| |||||||||||    
T  6987 ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaa 6923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10934 - 10970
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  10934 cttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5784 - 5852
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||| | |||||  ||||| ||||||    
T  5784 cttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacc 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 227942 - 227878
Alignment:
Q  10 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||||||| ||||||| ||||||||||||||||||| | |||  ||||| |||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaa 227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 80796 - 80754
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  80796 ttagatgattttgagtgcctgaacatgtataataatgattagg 80754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 128735 - 128775
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 128775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2312 - 2245
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaac 68  Q
    |||||||| ||||||||||||||| |||   | |||||||||||||||| ||||| |||||| |||||    
T  2312 cttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 4875 - 4910
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4875 actcgccacggcgagcagatgctctcgcctcgcgag 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000004; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 61386 - 61421
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||||| ||||||||||||||||    
T  61386 actcgccacggcgagcagatgctctcgcctcgcgag 61421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 125797 - 125855
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  125797 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 125855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 65304 - 65337
Alignment:
Q  112 tcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    ||||||||||||||||| ||||||||||||||||    
T  65304 tcgccacggcgagcagatgctctcgcctcgcgag 65337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 58102 - 58161
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 70  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||| |||||||    
T  58102 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 58161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 332850 - 332804
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 48  Q
    ||||||| ||||||||||||||| |||| ||| ||||||||||||||    
T  332850 ttagatgattttgagtgcctgaatatgtataagaatgattaggaaag 332804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 3560 - 3618
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| ||||||||||| | ||||||||||| ||| ||||||    
T  3560 tttgagtgcctgaacatacctagtaatgattagggatgaatgtaggatcagattgaacc 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 10599 - 10553
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  10599 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 10553  T

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Target: scaffold0233 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 14224 - 14270
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  14224 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 14270  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 25640 - 25598
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  25640 ttagatgattttgagtgcctgaaaatgtataataatgattagg 25598  T

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Target: scaffold0109 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 27064 - 27006
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  27064 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 27006  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 55271 - 55313
Alignment:
Q  2 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 44  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  55271 ttagatgattttgagtgcctgaacatgtataagaatgattagg 55313  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 9762 - 9716
Alignment:
Q  11 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  9762 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 9716  T

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Target: scaffold0210 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 21565 - 21614
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  21565 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 21614  T

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Target: scaffold0210; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 29457 - 29506
Alignment:
Q  96 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  29457 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 29506  T

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Target: scaffold0156 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 3193 - 3148
Alignment:
Q  12 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 57  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  3193 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 3148  T

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Target: scaffold0076 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24182 - 24255
Alignment:
Q  1 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 74  Q
    |||||||| ||||||||||||||| || | |||||||||||||| |||  | |||  ||||| |||||||||||    
T  24182 cttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaa 24255  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 3993 - 4033
Alignment:
Q  105 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 145  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  3993 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 4033  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 62592 - 62556
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||| |||||||||| |||||||||||||||||    
T  62592 actcgccatggcgagcagatgctctcgcctcgcgagt 62556  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 192757 - 192793
Alignment:
Q  110 actcgccacggcgagcagaggctctcgcctcgcgagt 146  Q
    |||||||| |||||||||| |||||||||||||||||    
T  192757 actcgccatggcgagcagatgctctcgcctcgcgagt 192793  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 307524 - 307460
Alignment:
Q  5 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 69  Q
    ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||| ||||||    
T  307524 gatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 307460  T

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