View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20509_high_14 (Length: 246)
Name: NF20509_high_14
Description: NF20509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20509_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 42218869 - 42218644
Alignment:
| Q |
1 |
ctaaagcaaaccgataatgatttggtcggtatttggcaaaattcatggatgattgtccaaaaggaagtatttgtttttattcgtcatataactgtatcgt |
100 |
Q |
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| T |
42218869 |
ctaaagcaaaccgataatgatttggtcggtatttggcgaaattcgtggatgattgtccaaaaggaagtatttgtttttattagtcatataactgtatcgt |
42218770 |
T |
|
| Q |
101 |
actattaattattctggtttacctaatagtgacatttaacaaccctattttcaataacactatatatattaaaacaaagtagtataatgaagtattatga |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42218769 |
actattaattattctggtttaccaaatagtgacatttaacaaccctattttcaataacactatatatattaaaacaaagtagtataatgaagtattatga |
42218670 |
T |
|
| Q |
201 |
attttcataaacttgattgatatact |
226 |
Q |
| |
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||||| |||||||||||||||||||| |
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| T |
42218669 |
attttaataaacttgattgatatact |
42218644 |
T |
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