View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2050_high_17 (Length: 205)

Name: NF2050_high_17
Description: NF2050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2050_high_17
NF2050_high_17
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-194)||(15047-15243)
scaffold0328 (4-138)||(13048-13182)
[»] chr6 (33 HSPs)
chr6 (1-138)||(3222637-3222776)
chr6 (1-138)||(9239031-9239171)
chr6 (1-138)||(34147402-34147542)
chr6 (1-138)||(34160018-34160158)
chr6 (1-138)||(15360099-15360239)
chr6 (1-138)||(654147-654287)
chr6 (1-138)||(11448927-11449067)
chr6 (1-138)||(1344991-1345131)
chr6 (5-138)||(21148512-21148647)
chr6 (1-113)||(12390481-12390596)
chr6 (3-138)||(28672125-28672263)
chr6 (1-138)||(5360072-5360212)
chr6 (3-138)||(21982322-21982459)
chr6 (1-138)||(9843994-9844134)
chr6 (9-138)||(17081055-17081187)
chr6 (1-138)||(11840957-11841096)
chr6 (1-138)||(9208308-9208448)
chr6 (73-138)||(14213013-14213078)
chr6 (3-138)||(9690639-9690777)
chr6 (72-130)||(11007295-11007353)
chr6 (1-113)||(17149482-17149597)
chr6 (77-130)||(33718478-33718531)
chr6 (43-138)||(15730496-15730594)
chr6 (61-138)||(33499593-33499671)
chr6 (73-138)||(14504083-14504148)
chr6 (77-114)||(32596211-32596248)
chr6 (69-137)||(10377843-10377911)
chr6 (74-125)||(27866217-27866268)
chr6 (76-130)||(17706328-17706382)
chr6 (105-138)||(4797260-4797293)
chr6 (1-58)||(12591693-12591750)
chr6 (73-138)||(17225797-17225862)
chr6 (77-129)||(21903629-21903682)
[»] chr3 (60 HSPs)
chr3 (1-138)||(26174169-26174309)
chr3 (1-138)||(15566501-15566640)
chr3 (1-138)||(52821637-52821776)
chr3 (1-138)||(53424178-53424317)
chr3 (1-138)||(8097280-8097420)
chr3 (1-138)||(8456151-8456291)
chr3 (1-138)||(35492967-35493107)
chr3 (1-138)||(40133450-40133590)
chr3 (1-138)||(49258263-49258403)
chr3 (1-138)||(30807154-30807294)
chr3 (1-138)||(10190743-10190883)
chr3 (1-130)||(18176896-18177028)
chr3 (1-138)||(45529756-45529895)
chr3 (1-138)||(46576404-46576544)
chr3 (1-138)||(48977444-48977584)
chr3 (1-138)||(10083820-10083960)
chr3 (1-138)||(21362999-21363139)
chr3 (44-138)||(24165716-24165812)
chr3 (1-138)||(25289716-25289855)
chr3 (1-130)||(30257680-30257812)
chr3 (1-138)||(45272417-45272557)
chr3 (1-138)||(53233912-53234051)
chr3 (1-138)||(24407317-24407457)
chr3 (1-130)||(25379817-25379949)
chr3 (5-138)||(39041853-39041989)
chr3 (6-138)||(32151485-32151620)
chr3 (72-138)||(53848435-53848501)
chr3 (1-130)||(2511306-2511438)
chr3 (5-130)||(33398477-33398605)
chr3 (1-121)||(29915288-29915410)
chr3 (1-121)||(29964441-29964563)
chr3 (9-138)||(31537839-31537971)
chr3 (1-138)||(40940881-40941021)
chr3 (5-138)||(4462693-4462828)
chr3 (1-138)||(7485532-7485666)
chr3 (1-111)||(7470244-7470356)
chr3 (5-138)||(34492576-34492712)
chr3 (1-138)||(52455650-52455790)
chr3 (5-138)||(8958036-8958173)
chr3 (1-138)||(17579136-17579277)
chr3 (75-138)||(54475814-54475877)
chr3 (1-138)||(1178228-1178366)
chr3 (1-95)||(26108348-26108445)
chr3 (72-130)||(26158941-26158999)
chr3 (72-138)||(48105007-48105073)
chr3 (76-130)||(55371303-55371357)
chr3 (77-138)||(4048085-4048146)
chr3 (78-138)||(50731238-50731298)
chr3 (78-138)||(50781556-50781616)
chr3 (5-113)||(51532849-51532960)
chr3 (71-130)||(4252405-4252464)
chr3 (72-138)||(1692963-1693029)
chr3 (1-130)||(11390658-11390790)
chr3 (1-138)||(48972715-48972852)
chr3 (91-138)||(3747730-3747777)
chr3 (73-138)||(25017620-25017684)
chr3 (1-127)||(53288725-53288853)
chr3 (70-138)||(6041671-6041739)
chr3 (74-114)||(33793584-33793624)
chr3 (61-113)||(34844496-34844548)
[»] chr7 (50 HSPs)
chr7 (1-138)||(654706-654845)
chr7 (1-138)||(7275337-7275477)
chr7 (1-138)||(21835211-21835351)
chr7 (1-138)||(22119948-22120088)
chr7 (1-138)||(40542911-40543051)
chr7 (1-138)||(2751331-2751471)
chr7 (1-130)||(7175871-7176003)
chr7 (1-138)||(11997909-11998049)
chr7 (1-138)||(21217834-21217974)
chr7 (5-138)||(17196951-17197087)
chr7 (1-138)||(29861730-29861870)
chr7 (1-138)||(10091248-10091387)
chr7 (1-138)||(16374054-16374194)
chr7 (1-130)||(22703546-22703678)
chr7 (1-138)||(22638352-22638488)
chr7 (3-138)||(23012509-23012647)
chr7 (1-138)||(28089876-28090019)
chr7 (1-138)||(2103115-2103253)
chr7 (1-138)||(28950931-28951071)
chr7 (2-138)||(18044168-18044307)
chr7 (1-138)||(27704062-27704201)
chr7 (72-138)||(3851891-3851957)
chr7 (12-138)||(23092167-23092296)
chr7 (1-138)||(27312212-27312352)
chr7 (5-138)||(31273978-31274113)
chr7 (76-138)||(31712903-31712965)
chr7 (1-138)||(41907515-41907654)
chr7 (69-128)||(25333534-25333593)
chr7 (1-138)||(27009419-27009560)
chr7 (72-138)||(31197724-31197790)
chr7 (1-138)||(2344359-2344499)
chr7 (1-138)||(19421291-19421431)
chr7 (4-130)||(39145661-39145790)
chr7 (72-138)||(42913514-42913580)
chr7 (1-130)||(17212113-17212245)
chr7 (71-130)||(8943410-8943469)
chr7 (79-138)||(32849732-32849791)
chr7 (61-138)||(33137826-33137903)
chr7 (25-138)||(36772304-36772420)
chr7 (75-138)||(23330740-23330803)
chr7 (1-138)||(28647029-28647169)
chr7 (72-138)||(21574103-21574169)
chr7 (1-58)||(7799916-7799973)
chr7 (75-135)||(43785303-43785363)
chr7 (71-138)||(22696454-22696521)
chr7 (73-130)||(1766153-1766210)
chr7 (9-58)||(6491675-6491724)
chr7 (73-126)||(9683961-9684014)
chr7 (84-137)||(30345511-30345564)
chr7 (1-58)||(42814924-42814981)
[»] chr8 (45 HSPs)
chr8 (1-138)||(4718705-4718845)
chr8 (1-138)||(28193534-28193674)
chr8 (1-138)||(34237656-34237796)
chr8 (1-130)||(39349316-39349448)
chr8 (1-138)||(3734624-3734764)
chr8 (1-138)||(8765527-8765667)
chr8 (1-138)||(21603290-21603430)
chr8 (1-138)||(32879339-32879479)
chr8 (4-138)||(2618249-2618386)
chr8 (1-138)||(6953009-6953148)
chr8 (1-138)||(15259407-15259547)
chr8 (1-138)||(20305968-20306108)
chr8 (1-138)||(21092601-21092741)
chr8 (1-130)||(28088346-28088478)
chr8 (1-138)||(42643119-42643259)
chr8 (1-138)||(19471669-19471810)
chr8 (1-138)||(19542593-19542734)
chr8 (1-138)||(19589962-19590103)
chr8 (72-138)||(2639412-2639478)
chr8 (1-138)||(42328064-42328204)
chr8 (1-130)||(264409-264540)
chr8 (1-130)||(651381-651512)
chr8 (1-130)||(837116-837247)
chr8 (1-138)||(25248409-25248546)
chr8 (3-138)||(34610688-34610826)
chr8 (1-138)||(4698724-4698864)
chr8 (1-130)||(14633014-14633146)
chr8 (1-126)||(27746348-27746476)
chr8 (1-138)||(2166759-2166896)
chr8 (61-138)||(7557952-7558029)
chr8 (1-138)||(20469977-20470116)
chr8 (1-126)||(26168862-26168989)
chr8 (72-138)||(10292188-10292254)
chr8 (72-138)||(18128647-18128713)
chr8 (61-138)||(12312968-12313045)
chr8 (69-130)||(13749187-13749248)
chr8 (5-126)||(28964097-28964220)
chr8 (1-120)||(21667610-21667731)
chr8 (72-138)||(33747016-33747082)
chr8 (3-138)||(34694576-34694715)
chr8 (3-96)||(24999296-24999392)
chr8 (93-138)||(9713609-9713654)
chr8 (77-130)||(16990722-16990775)
chr8 (73-138)||(24018518-24018583)
chr8 (72-129)||(43817759-43817816)
[»] chr5 (54 HSPs)
chr5 (1-138)||(8484662-8484802)
chr5 (1-130)||(38684264-38684395)
chr5 (1-138)||(18207263-18207403)
chr5 (1-138)||(27498732-27498872)
chr5 (1-138)||(19456212-19456350)
chr5 (1-138)||(11926502-11926643)
chr5 (1-138)||(30485884-30486024)
chr5 (4-138)||(19145413-19145549)
chr5 (1-138)||(15641107-15641246)
chr5 (1-138)||(32059441-32059581)
chr5 (1-130)||(11464917-11465048)
chr5 (1-130)||(13108459-13108590)
chr5 (1-138)||(37495103-37495250)
chr5 (4-138)||(7085627-7085764)
chr5 (5-130)||(33709512-33709638)
chr5 (1-130)||(13038464-13038595)
chr5 (72-138)||(22693065-22693131)
chr5 (1-138)||(6014281-6014421)
chr5 (1-130)||(10869574-10869706)
chr5 (5-138)||(31287947-31288083)
chr5 (1-138)||(34310198-34310338)
chr5 (75-138)||(41351105-41351168)
chr5 (72-138)||(38630980-38631046)
chr5 (1-130)||(36954874-36955006)
chr5 (14-130)||(35425082-35425201)
chr5 (1-130)||(42193541-42193671)
chr5 (72-130)||(13659254-13659312)
chr5 (5-138)||(4603837-4603973)
chr5 (25-138)||(9659312-9659428)
chr5 (69-138)||(12317156-12317224)
chr5 (77-130)||(27487563-27487616)
chr5 (1-126)||(5049193-5049320)
chr5 (73-128)||(5067392-5067447)
chr5 (72-138)||(21236363-21236429)
chr5 (72-138)||(22392818-22392884)
chr5 (1-138)||(12398449-12398589)
chr5 (5-130)||(23270531-23270659)
chr5 (1-117)||(15971144-15971263)
chr5 (75-138)||(36895558-36895621)
chr5 (88-138)||(10631290-10631340)
chr5 (10-138)||(25750614-25750741)
chr5 (4-138)||(26009265-26009402)
chr5 (1-58)||(25586988-25587045)
chr5 (86-138)||(28614487-28614539)
chr5 (1-56)||(1827616-1827671)
chr5 (79-138)||(41084120-41084179)
chr5 (76-138)||(930487-930549)
chr5 (1-35)||(15931115-15931149)
chr5 (72-138)||(34049941-34050007)
chr5 (77-130)||(42006868-42006921)
chr5 (78-138)||(8821120-8821180)
chr5 (74-138)||(25548535-25548599)
chr5 (78-138)||(33737878-33737937)
chr5 (58-138)||(41568870-41568950)
[»] chr1 (49 HSPs)
chr1 (1-138)||(7766728-7766868)
chr1 (1-138)||(4621238-4621378)
chr1 (1-138)||(24122079-24122219)
chr1 (1-138)||(46607866-46608006)
chr1 (1-130)||(24674449-24674581)
chr1 (1-138)||(30677232-30677372)
chr1 (1-138)||(15059403-15059543)
chr1 (1-138)||(9500356-9500496)
chr1 (1-138)||(17935825-17935965)
chr1 (1-130)||(27454873-27455007)
chr1 (1-138)||(36155889-36156029)
chr1 (72-138)||(48699889-48699955)
chr1 (1-130)||(168257-168389)
chr1 (1-138)||(7197248-7197387)
chr1 (1-138)||(8254753-8254893)
chr1 (1-138)||(32729601-32729740)
chr1 (1-137)||(8077703-8077841)
chr1 (1-130)||(23734172-23734305)
chr1 (1-130)||(23741364-23741497)
chr1 (5-135)||(1378958-1379090)
chr1 (1-138)||(7578465-7578605)
chr1 (1-130)||(45859052-45859184)
chr1 (1-138)||(34778398-34778535)
chr1 (1-138)||(37351454-37351602)
chr1 (1-130)||(21726785-21726917)
chr1 (61-138)||(26513149-26513226)
chr1 (5-110)||(7946904-7947011)
chr1 (72-138)||(22910001-22910067)
chr1 (72-138)||(35138118-35138184)
chr1 (62-138)||(27159205-27159281)
chr1 (75-138)||(23041655-23041718)
chr1 (69-119)||(2537820-2537870)
chr1 (72-130)||(8779745-8779803)
chr1 (1-130)||(18646909-18647041)
chr1 (1-138)||(33905511-33905651)
chr1 (71-138)||(1486549-1486616)
chr1 (1-96)||(23232304-23232406)
chr1 (1-130)||(40145890-40146027)
chr1 (25-138)||(45331622-45331739)
chr1 (76-138)||(50202680-50202741)
chr1 (89-138)||(5315478-5315527)
chr1 (93-138)||(14603947-14603992)
chr1 (1-36)||(16899559-16899594)
chr1 (72-110)||(12876965-12877003)
chr1 (5-130)||(25496503-25496625)
chr1 (72-130)||(47091751-47091809)
chr1 (44-138)||(40802070-40802166)
chr1 (77-130)||(52135261-52135314)
chr1 (73-129)||(43769975-43770031)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-138)||(5083-5223)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-138)||(161865-162005)
[»] chr4 (62 HSPs)
chr4 (1-138)||(5609203-5609343)
chr4 (1-138)||(20566406-20566546)
chr4 (1-138)||(32986253-32986393)
chr4 (1-138)||(33696280-33696420)
chr4 (1-138)||(34844759-34844899)
chr4 (1-138)||(40058853-40058993)
chr4 (1-138)||(52983675-52983815)
chr4 (1-138)||(27528796-27528936)
chr4 (1-138)||(19660533-19660673)
chr4 (1-138)||(34723855-34723995)
chr4 (1-138)||(46714448-46714589)
chr4 (5-138)||(44343574-44343710)
chr4 (1-138)||(45787705-45787845)
chr4 (1-138)||(18875518-18875657)
chr4 (1-126)||(32990491-32990619)
chr4 (1-137)||(20077986-20078125)
chr4 (1-138)||(25852270-25852411)
chr4 (1-130)||(9517650-9517782)
chr4 (1-138)||(36131511-36131651)
chr4 (1-130)||(54127351-54127483)
chr4 (1-138)||(7391966-7392104)
chr4 (25-130)||(27574398-27574506)
chr4 (1-130)||(49287914-49288045)
chr4 (76-138)||(23639758-23639820)
chr4 (76-138)||(23645416-23645478)
chr4 (77-138)||(52494623-52494684)
chr4 (1-130)||(51535669-51535809)
chr4 (1-130)||(35229224-35229356)
chr4 (72-130)||(4064990-4065048)
chr4 (72-138)||(9978510-9978576)
chr4 (5-126)||(34835589-34835713)
chr4 (3-124)||(32942428-32942552)
chr4 (14-126)||(55961767-55961881)
chr4 (3-130)||(30879175-30879304)
chr4 (2-138)||(35674750-35674881)
chr4 (72-130)||(43719096-43719154)
chr4 (1-138)||(12500060-12500199)
chr4 (73-138)||(55158344-55158409)
chr4 (1-113)||(13873321-13873436)
chr4 (78-138)||(23131437-23131497)
chr4 (72-138)||(4912056-4912122)
chr4 (73-130)||(21387496-21387551)
chr4 (3-130)||(25969512-25969639)
chr4 (68-130)||(33289180-33289242)
chr4 (1-58)||(22625154-22625211)
chr4 (73-138)||(51595153-51595218)
chr4 (1-49)||(3392759-3392806)
chr4 (78-138)||(17637853-17637912)
chr4 (9-138)||(20527035-20527166)
chr4 (78-130)||(37302623-37302675)
chr4 (79-138)||(7093508-7093567)
chr4 (75-138)||(9646217-9646280)
chr4 (72-126)||(13017843-13017897)
chr4 (76-130)||(13716459-13716513)
chr4 (72-130)||(22488037-22488095)
chr4 (3-89)||(33992684-33992773)
chr4 (61-138)||(45302954-45303032)
chr4 (77-130)||(12824535-12824588)
chr4 (73-126)||(13550339-13550392)
chr4 (1-33)||(2351069-2351101)
chr4 (78-138)||(41621583-41621643)
chr4 (1-53)||(43719154-43719206)
[»] chr2 (50 HSPs)
chr2 (1-138)||(44946054-44946194)
chr2 (1-138)||(11941211-11941351)
chr2 (1-138)||(15038015-15038155)
chr2 (1-138)||(2140487-2140624)
chr2 (1-138)||(33827574-33827714)
chr2 (1-138)||(35171856-35171996)
chr2 (1-138)||(17324822-17324960)
chr2 (1-138)||(19054081-19054222)
chr2 (1-138)||(30466831-30466971)
chr2 (1-138)||(24196060-24196198)
chr2 (1-138)||(25293222-25293355)
chr2 (1-138)||(43374331-43374466)
chr2 (19-130)||(34516423-34516536)
chr2 (1-130)||(36242321-36242453)
chr2 (1-130)||(4567438-4567578)
chr2 (1-113)||(10582018-10582131)
chr2 (1-138)||(36390570-36390709)
chr2 (1-120)||(44976172-44976295)
chr2 (74-138)||(27269345-27269409)
chr2 (18-138)||(28668946-28669069)
chr2 (1-130)||(41314048-41314179)
chr2 (1-138)||(8192353-8192492)
chr2 (72-138)||(18692090-18692156)
chr2 (73-130)||(18976464-18976521)
chr2 (5-138)||(13266550-13266685)
chr2 (72-138)||(14486955-14487021)
chr2 (72-138)||(44929847-44929913)
chr2 (1-130)||(5394073-5394205)
chr2 (1-130)||(8258953-8259085)
chr2 (1-138)||(41329899-41330038)
chr2 (75-138)||(39957891-39957954)
chr2 (1-91)||(23787056-23787149)
chr2 (72-138)||(31778161-31778227)
chr2 (1-130)||(3943796-3943928)
chr2 (45-138)||(44610139-44610235)
chr2 (73-129)||(4852660-4852716)
chr2 (1-130)||(19174819-19174950)
chr2 (73-138)||(29361679-29361744)
chr2 (74-138)||(6714296-6714360)
chr2 (98-138)||(27290730-27290770)
chr2 (1-36)||(32845147-32845182)
chr2 (72-138)||(714126-714192)
chr2 (72-130)||(9400970-9401028)
chr2 (1-83)||(27290644-27290729)
chr2 (72-138)||(28194139-28194205)
chr2 (72-130)||(45132417-45132475)
chr2 (1-30)||(4852614-4852643)
chr2 (1-138)||(19605847-19605986)
chr2 (5-58)||(45271444-45271497)
chr2 (72-120)||(32845206-32845254)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-138)||(40381-40520)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-138)||(52872-53012)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-130)||(7318-7450)
[»] scaffold0623 (1 HSPs)
scaffold0623 (1-138)||(1058-1197)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-138)||(9301-9440)
scaffold0366 (1-121)||(12019-12141)
[»] scaffold0102 (1 HSPs)
scaffold0102 (5-138)||(39152-39288)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-138)||(32344-32483)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-138)||(10696-10834)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-138)||(97367-97507)
[»] scaffold0049 (1 HSPs)
scaffold0049 (72-138)||(66884-66950)
[»] scaffold1175 (1 HSPs)
scaffold1175 (72-138)||(2427-2493)
[»] scaffold0199 (1 HSPs)
scaffold0199 (77-138)||(8452-8513)
[»] scaffold0160 (1 HSPs)
scaffold0160 (3-138)||(29144-29281)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-138)||(20278-20417)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-130)||(41654-41785)
[»] scaffold0028 (1 HSPs)
scaffold0028 (75-138)||(27903-27966)


Alignment Details
Target: scaffold0328 (Bit Score: 102; Significance: 7e-51; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 15047 - 15243
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    |||||||| |||||||||||||||||||||||||||| || | ||| |||||||||  ||| |||||||| |||||||||||||||||||| |||||||     
T  15047 tcaggttcaattccctctggtgctaatttcggtgggttaagtccatccagagcttgctctggctttaaatgggccccccgcaagtgggcgg-gggattgg 15145  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt-nnnnnnntgacaatattataagatggtaaatttaaaaaatgctattgatgatgatg 194  Q
    || |||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15146 tctcctcggattagtcaattcttggatcggataacaagtttaaaaaaaatgacaatattataagatggtaaatttgaaaaatgctattgatgatgatg 15243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 13182 - 13048
Alignment:
Q  4 ggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgtctttaaatggc-cccccgcaagtgggcggtgggattgttcccc 102  Q
    |||||||||||||||||||| ||||||||||||| || | |||||||||||||||  ||||||| ||  ||||||||||||| ||||||||||| |||||    
T  13182 ggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgcta-ctttaaacggggcccccgcaagtggacggtgggattgatcccc 13084  T
Q  103 tcggattagtcaattcttggatcggataacgagttt 138  Q
    || |||||||  |||||||||||||||| |||||||    
T  13083 tcagattagttgattcttggatcggataccgagttt 13048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 3222776 - 3222637
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct--gtctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||||||||||  ||||||||| ||  |||||||||||||||||||||||| |    
T  3222776 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgtctttaaacggggccccgcaagtgggcggtgggattggt 3222677  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  3222676 cccctcggattagtcgattcttggatcggataccgagttt 3222637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9239031 - 9239171
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||| || | |||| |||||||||| |  ||||||||||  |||||||||||||||||||||||||     
T  9239031 tcaggttcgattccctctggtgccaatttcggtgggttaagtccatatagagcttgctttggctttaaatggggcccccgcaagtgggcggtgggattgg 9239130  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  9239131 tcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 34147402 - 34147542
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg-ccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| || ||||||||||||||||||||||||||     
T  34147402 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattgg 34147501  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  34147502 tcccctcggattagtcgattcttggatcggataccgagttt 34147542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 34160018 - 34160158
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg-ccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| || ||||||||||||||||||||||||||     
T  34160018 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattgg 34160117  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  34160118 tcccctcggattagtcgattcttggatcggataccgagttt 34160158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15360239 - 15360099
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||||||| |||||||||||||||     
T  15360239 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattgg 15360140  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  15360139 tcccctcggattagtcgattcttggatcggataccgagttt 15360099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 654287 - 654147
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccc-cccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  | |||||||||||||||||||||||     
T  654287 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattgg 654188  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| ||| |||||||||||| |||||||    
T  654187 tcccctcggattagtcgattattggatcggataccgagttt 654147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 11448927 - 11449067
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  11448927 tcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 11449026  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| ||||||| |||||||| |||||||    
T  11449027 tcccctcggattagtcgattcttgaatcggatatcgagttt 11449067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1344991 - 1345131
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg-ccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| |||||| |||||  || | |||||| |||||||| |  ||||||| || |||||||||||||| |||||||||||     
T  1344991 tcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggctttaaacgggccccccgcaagtggacggtgggattgg 1345090  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  1345091 tccccttggattagtcgattcttggatcggataccgagttt 1345131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 21148647 - 21148512
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcccc 102  Q
    |||||||||||||| |||| ||||||| ||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||| |||||    
T  21148647 gttcgattccctctagtgccaatttcgatgggctaagtccatacagagcttgctctgactttaaacggggccccgcaagtgggcggtgggattggtcccc 21148548  T
Q  103 tcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||| ||||||| |||||||| |||||||    
T  21148547 tcggattagtcgattcttgaatcggataccgagttt 21148512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12390481 - 12390596
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||||||||  ||| |||||||  || |||||||||||||||||||||||||     
T  12390481 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattgg 12390580  T
Q  98 tcccctcggattagtc 113  Q
    ||||||||||||||||    
T  12390581 tcccctcggattagtc 12390596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 28672125 - 28672263
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgttc 99  Q
    ||||||||||||||||||||  ||||| ||||||  || | |||||||||||||   || |||||||  |||||| ||||||||||||||||||||| ||    
T  28672125 aggttcgattccctctggtgtcaattttggtgggctaagtccatacagagcttgttttggctttaaacgggcccctcgcaagtgggcggtgggattggtc 28672224  T
Q  100 ccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||| ||||||||||| |||| |||||||    
T  28672225 ccctcggattagtcgattcttggatcagataccgagttt 28672263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 5360212 - 5360072
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||  ||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||| |||||||||||||||||||     
T  5360212 tcaggttcgattccctctaatgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggaacccccacaagtgggcggtgggattgg 5360113  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||| ||||||||| |||||||    
T  5360112 tcccctcgaattagtcgattcttagatcggataccgagttt 5360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 21982459 - 21982322
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttc 99  Q
    |||||||||||||  |||||| |||||| |||||  || | ||||||||||||||| |  ||||||| ||  ||||||||||||||||||||||||| ||    
T  21982459 aggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtc 21982360  T
Q  100 ccctcggattagtcaattcttggatcggataacgagttt 138  Q
    || ||||||||||| |||||||||||||||| |||||||    
T  21982359 cc-tcggattagtcgattcttggatcggataccgagttt 21982322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9843994 - 9844134
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||| | |||||||||  ||||| ||||||| || | |||||||||||||  ||| ||||||| ||  ||||| ||||||||||||| |||||     
T  9843994 tcaggttcgacttcctctggtgtcaattttggtgggttaagtccatacagagcttgttctggctttaaacggggccccctcaagtgggcggtgagattgg 9844093  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  9844094 tcccttcggattagtcgattcttggatcggatatcgagttt 9844134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 17081187 - 17081055
Alignment:
Q  9 gattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttcccctcg 105  Q
    ||||||||||||||  ||||||||||||  || | ||||||||||||||| |  ||||||||||  ||||||||||||||||||||||||| ||||||||    
T  17081187 gattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcg 17081088  T
Q  106 gattagtcaattcttggatcggataacgagttt 138  Q
     || |||   ||||||||||| ||| |||||||    
T  17081087 aataagttgtttcttggatcgaataccgagttt 17081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 11840957 - 11841096
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgc--tgtctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||| ||||||||||||||||| ||||||||||||| || | |||||| |||||||  ||  |||||| ||  ||||  |||||| ||||||||||  |    
T  11840957 tcaggctcgattccctctggtgccaatttcggtgggttaagtccatacaaagcttgctttggttttaaacggggccccataagtggacggtgggattagt 11841056  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| ||||||| ||| |||||||||||| |||||||    
T  11841057 cccctcgaattagtcgattattggatcggataccgagttt 11841096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9208308 - 9208448
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagc-ttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||| ||||||| |||||||||||| ||  | |||||||||| ||||| |  ||||||||||  |||||||||||||||||||||||||    
T  9208308 tcaggttcgattccccctggtgccaatttcggtgggcaag-tccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggattg 9208406  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     || |||| || ||||| |||||||||||  ||| |||||||    
T  9208407 gtctcctcagaatagtcgattcttggatcaaataccgagttt 9208448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 14213013 - 14213078
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| |||||||||| ||| |||||||||||| |||||||||||||||| |||||||    
T  14213013 ccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttt 14213078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 9690777 - 9690639
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccc-cgcaagtgggcggtgggattgttc 99  Q
    |||||||||| | ||| |||  ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||| | ||||||| ||||||||||| ||    
T  9690777 aggttcgatttcttctagtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccctcacaagtggacggtgggattggtc 9690678  T
Q  100 ccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | |||||||||||| |||||||||||||||| |||||||    
T  9690677 ctctcggattagtcgattcttggatcggataccgagttt 9690639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 11007295 - 11007353
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||||    
T  11007295 cccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggata 11007353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 17149597 - 17149482
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagag-cttgc--tgtctttaaat-ggccccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||||||||||||||||||||| ||  || | ||||||||| |||||  || |||||||| || ||||||||||||  |||||||||||    
T  17149597 tcaggttcgattccctctggtgctaatttcggttgg-caagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggtgggattg 17149499  T
Q  97 ttcccctcggattagtc 113  Q
     |||||||| |||||||    
T  17149498 gtcccctcgaattagtc 17149482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 33718531 - 33718478
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  33718531 gcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 138
Target Start/End: Complemental strand, 15730594 - 15730496
Alignment:
Q  43 tcatacagagcttg--ctgtctttaaatg-gccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||  ||| ||||||| | | ||||| || |||||||||||||||| || ||||||||||||| |||||| ||||||||| |||||||    
T  15730594 tcatacagagcttgttctggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagttt 15730496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 33499593 - 33499671
Alignment:
Q  61 ctttaaatggcccc-ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||| ||| || ||||||||||||||||||| ||||||||||||||||| ||  |||| |||||| |||||||    
T  33499593 ctttaaatgggccctccacaagtgggcggtgggattggtcccctcggattagtcagttgatggaccggataccgagttt 33499671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 14504148 - 14504083
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||||||||||| ||| |||| ||||||| || |||| |||||||| |||||||    
T  14504148 ccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagttt 14504083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 32596211 - 32596248
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtca 114  Q
    |||||||||||||||||||| |||||||||||||||||    
T  32596211 gcaagtgggcggtgggattggtcccctcggattagtca 32596248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 10377843 - 10377911
Alignment:
Q  69 ggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagtt 137  Q
    |||||||| |||||||||||||| |||| |||||||||| |||||  | ||||||| ||||| ||||||    
T  10377843 ggccccccacaagtgggcggtggcattggtcccctcggagtagtcggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 27866268 - 27866217
Alignment:
Q  74 cccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatc 125  Q
    ||||||||||||||||||||||  |||||||| ||||||| ||| |||||||    
T  27866268 cccgcaagtgggcggtgggattagtcccctcgaattagtcgatttttggatc 27866217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 17706382 - 17706328
Alignment:
Q  76 cgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||| ||||| ||||| |  |||||||| |||||||||||||||||||||    
T  17706382 cgcaagtggacggtgtgattggtttcctcggataagtcaattcttggatcggata 17706328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 4797260 - 4797293
Alignment:
Q  105 ggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||| ||||||||||||||||||||||||    
T  4797260 ggattagtcgattcttggatcggataacgagttt 4797293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12591693 - 12591750
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct 58  Q
    |||||||||||||||||| |||| |||||| |||||  || | |||||||||||||||    
T  12591693 tcaggttcgattccctctcgtgccaatttcagtgggctaagtccatacagagcttgct 12591750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 17225797 - 17225862
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||||||||||| || |||| ||||||||  | ||| ||||||||| |||||||    
T  17225797 ccccgcaaatgggcggtgggattgatctcctcagattagtcggtccttagatcggatatcgagttt 17225862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 21903682 - 21903629
Alignment:
Q  77 gcaagtgggcggtgggattgttcccc-tcggattagtcaattcttggatcggat 129  Q
    ||||||||||||||||| || ||||| || |||||||| |||||||||||||||    
T  21903682 gcaagtgggcggtgggaatggtccccctcagattagtcgattcttggatcggat 21903629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 6e-39; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 26174169 - 26174309
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||| |||||||||| ||||||||||||| || | ||||||||||||||| |  |||||||| || |||||||||||||||||||||||||     
T  26174169 tcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaatagggcccccgcaagtgggcggtgggattgg 26174268  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  26174269 tcccctcggattagtcgattcttggatcggataccgagttt 26174309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15566640 - 15566501
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||||||||| |||| ||||||||||||  || | ||||||||||||||| |  ||||||| || ||||||||||||||||||||||||| |    
T  15566640 tcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccgcaagtgggcggtgggattggt 15566541  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| |||||||| |||||||||||||||| |||||||    
T  15566540 cccctcagattagtcgattcttggatcggataccgagttt 15566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 52821776 - 52821637
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| |||||||||| |  || | ||||||||||||||| |  ||||||| ||  ||||| |||||||||||||||||| |    
T  52821776 tcaggttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacggggccccgtaagtgggcggtgggattggt 52821677  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  52821676 cccctcggattagtcgattcttggatcggataccgagttt 52821637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 53424317 - 53424178
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||||||| |||||| ||||||||||||  || | ||||||||| ||||| |  ||||||| || |||||||||||| |||||||||||| |    
T  53424317 tcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagtttgctatggctttaaacgggcccccgcaagtgagcggtgggattggt 53424218  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  53424217 cccctcggattagtcgattcttggatcggataccgagttt 53424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 8097420 - 8097280
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||| |||||||||||| ||||  || | |||||||||| |||| |  ||||||| ||  |||||||||||||||||||||||||     
T  8097420 tcaggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcatgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 8097321  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  8097320 tcccctcggattagtcgattcttggatcggataccgagttt 8097280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 8456291 - 8456151
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||||||||||||| |||||||||     
T  8456291 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcagtgggattgg 8456192  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| ||||||| |||||||| |||||||    
T  8456191 tcccctcggattagtcgattcttgaatcggataccgagttt 8456151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 35492967 - 35493107
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  35492967 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 35493066  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||| | ||| |||||||    
T  35493067 tcccctcggattagtcgattcttggattgaataccgagttt 35493107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 40133590 - 40133450
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||  ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  40133590 tcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 40133491  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||||||||||||| |||||||    
T  40133490 tcccctcgaattagtcgattcttggatcggataccgagttt 40133450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 49258403 - 49258263
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||| |||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||| |||||||||||||||||||     
T  49258403 tcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggcggtgggattgg 49258304  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  49258303 tcccctcggattagtcgattcttggatcggataccgagttt 49258263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 30807294 - 30807154
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa--tggccccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||||||||  ||| |||||||   ||||||||||||||||||||| ||||||    
T  30807294 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcggtaggattg 30807195  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     | |||||||||||||| |||||||||||||||| |||||||    
T  30807194 gt-ccctcggattagtcgattcttggatcggataccgagttt 30807154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 10190883 - 10190743
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||| |||||||||| |||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||||||||||| |||||||||||     
T  10190883 tcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgggattgg 10190784  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  10190783 tcccctcggattagtcgattcttggatcggataccgagttt 10190743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 18177028 - 18176896
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| |||||||||||   || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  18177028 tcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 18176929  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||| ||||||||||| ||||||||||||||||    
T  18176928 tcccatcggattagtcgattcttggatcggata 18176896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 45529895 - 45529756
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg-ccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||||| || ||||||| ||||  || | ||||||||||||||| |  ||||||| || ||||||||||||||||||||||||||     
T  45529895 tcaggttcgattccctctggagccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattgg 45529796  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||| ||||||||| |||||||    
T  45529795 tcccctcggattagtcgattctt-gatcggataccgagttt 45529756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 46576404 - 46576544
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| |||||| |||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||| ||||||     
T  46576404 tcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtcggattgg 46576503  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  46576504 tccccttggattagtcgattcttggatcggataccgagttt 46576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 48977444 - 48977584
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccccc-gcaagtgggcggtgggattgt 97  Q
    |||||||||||||| |||||||| ||||||||||||| || | ||||||||||||||| |  ||||||| ||  |||| ||||||||||||||||||||     
T  48977444 tcaggttcgattccttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcggtgggattgg 48977543  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||  | ||||||||||||| |||||||    
T  48977544 tcccctcggattagtcggtccttggatcggataccgagttt 48977584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 10083960 - 10083820
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||| |||||||||| |||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||| ||||||| |||||||||||     
T  10083960 tcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacggtgggattgg 10083861  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  10083860 tcccctcggattagtcgattcttggatcggataccgagttt 10083820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21362999 - 21363139
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||  ||||||||| ||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  21362999 tcaggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattgg 21363098  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | ||||||||||| || |||||||||||||||| |||||||    
T  21363099 ttccctcggattaatcgattcttggatcggataccgagttt 21363139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 24165812 - 24165716
Alignment:
Q  44 catacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||| |  ||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  24165812 catacagagcttgctctggctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttt 24165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 25289855 - 25289716
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||| |||| ||||||||||||  || | |||||||||||||  ||| |||||||  || |||||||||||||||||||||||||     
T  25289855 tcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 25289756  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | |||||| ||||||| |||||||||||||||| |||||||    
T  25289755 t-ccctcgaattagtcgattcttggatcggataccgagttt 25289716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 30257680 - 30257812
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| |||||| ||||||| |||   || | ||||||||||||||| |  ||||||||||  |||||||||||||||||||| ||||     
T  30257680 tcaggttcgattccctttggtgccaatttcgatggactaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtggcattgg 30257779  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| ||||||||||||||||    
T  30257780 tcccctcggattagtcgattcttggatcggata 30257812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 45272557 - 45272417
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||| |||||||||||||||||| ||||||||||||  || | ||||| ||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  45272557 tcagtttcgattccctctggtgccaatttcggtgggctaagtccatacggagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 45272458  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||  | |||||||||||||| |||||||    
T  45272457 tcccctcggattagttgactcttggatcggataccgagttt 45272417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 53234051 - 53233912
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| ||||||||||||  || | ||||||||||||||| |  || |||| ||  |||||||||||||||||||||||||     
T  53234051 tcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctctaaacggggcccccgcaagtgggcggtgggattgg 53233952  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||| ||||||||| |||||||    
T  53233951 tcccctcggattagtcgattctt-gatcggataccgagttt 53233912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24407317 - 24407457
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccc-cgcaagtgggcggtgggattgt 97  Q
    |||| |||||||| ||||||||||||||||||||||| || |  |||||||  ||||| |  ||||||| ||  ||  |||||||||||||||||||||     
T  24407317 tcagattcgattctctctggtgctaatttcggtgggttaagtatatacagaatttgctctgactttaaacggggccatcgcaagtgggcggtgggattgg 24407416  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  24407417 tcccctcggattagtcgattcttggatcggataccgagttt 24407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 25379817 - 25379949
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||| ||| |||| |||||||| |||  || | ||||||||||||||| |  ||||||| ||  |||||||||| ||||||||||||||     
T  25379817 tcaggttcgattccttctagtgccaatttcggagggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagcgggcggtgggattgg 25379916  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| ||||||||||||||||    
T  25379917 tcccctcggattagtcgattcttggatcggata 25379949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 39041989 - 39041853
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttccc 101  Q
    ||||||||| ||||||||| ||||||||||||  || | ||| ||||||||||| |  ||||||| ||  |||||||||||||| |||||||||| |||     
T  39041989 gttcgattctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattggtcca 39041890  T
Q  102 ctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||| |||||||||||||||| |||||||    
T  39041889 ctcggattagtcgattcttggatcggataccgagttt 39041853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 32151485 - 32151620
Alignment:
Q  6 ttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttcccc 102  Q
    |||||||| |||| |||| ||||||||||||  ||  |||||||||||||||| |  ||||||| ||  ||||||||||||||||||| ||||| |||||    
T  32151485 ttcgattctctctagtgccaatttcggtgggctaagctcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccc 32151584  T
Q  103 tcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| ||||||| |||||||||||||||| |||||||    
T  32151585 tcgaattagtcgattcttggatcggataccgagttt 32151620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 53848501 - 53848435
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  53848501 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 53848435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2511438 - 2511306
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || ||||||||||||| |  ||| |||||||  || || ||||||||||||||||||||||     
T  2511438 tcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagctcgctctgactttaaacgggacctccgcaagtgggcggtgggattgg 2511339  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    || ||||| ||||||  ||||||| ||||||||    
T  2511338 tctcctcgaattagtagattcttgaatcggata 2511306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 33398605 - 33398477
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttccc 101  Q
    |||||||||||||| |||| ||||| ||||||| |  | ||||||||||||||| |  ||||||| ||  ||||||||||||||||||||||||| | ||    
T  33398605 gttcgattccctctagtgccaattttggtgggttatgtccatacagagcttgctctagctttaaacggggcccccgcaagtgggcggtgggattggttcc 33398506  T
Q  102 ctcggattagtcaattcttggatcggata 130  Q
    |||| ||||||| ||||||||||||||||    
T  33398505 ctcgaattagtcgattcttggatcggata 33398477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 29915410 - 29915288
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgc--tgtctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||| | |||||||| | ||||||||||  || | ||||||||||||||  || ||||||| || ||||||||||||||||||||||||| |    
T  29915410 tcaggttcgatttcttctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaaacgggcccccgcaagtgggcggtgggattgat 29915311  T
Q  99 cccctcggattagtcaattcttg 121  Q
    ||| ||| ||||||| |||||||    
T  29915310 cccatcgaattagtcgattcttg 29915288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 29964563 - 29964441
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgc--tgtctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||| | |||||||| | ||||||||||  || | ||||||||||||||  || ||||||| || ||||||||||||||||||||||||| |    
T  29964563 tcaggttcgatttcttctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaaacgggcccccgcaagtgggcggtgggattgat 29964464  T
Q  99 cccctcggattagtcaattcttg 121  Q
    ||| ||| ||||||| |||||||    
T  29964463 cccatcgaattagtcgattcttg 29964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 31537971 - 31537839
Alignment:
Q  9 gattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccccc-gcaagtgggcggtgggattgttcccctcg 105  Q
    ||||||||||||||| ||||| ||||||  || |  ||||||||||| || |  ||||||| ||  |||| |||||||||||||| ||||| ||||||||    
T  31537971 gattccctctggtgccaattttggtgggctaagtctatacagagcttactctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcg 31537872  T
Q  106 gattagtcaattcttggatcggataacgagttt 138  Q
     |||||||||||||||||||||||| |||||||    
T  31537871 aattagtcaattcttggatcggatatcgagttt 31537839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 40940881 - 40941021
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| |||||||||||   || | |||||||||||||  ||| |||||||  || ||||| |||||||| ||| ||||||     
T  40940881 tcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctgactttaaacggggcccccacaagtgggtggtaggattgg 40940980  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| |||| |||||||||| ||| |||| |||||||    
T  40940981 tcccctcgaattactcaattcttgaatcagataccgagttt 40941021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 4462693 - 4462828
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcccc 102  Q
    ||||||||||||||||  | ||||||| ||||  || |||||||||||||| || |  ||||||| ||  |||||||||||| ||||||||||| ||| |    
T  4462693 gttcgattccctctggcaccaatttcgatgggctaagttcatacagagcttactctagctttaaacggggccccgcaagtggacggtgggattgatccac 4462792  T
Q  103 tcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||  |||||||||| ||||| |||||||    
T  4462793 tcggattagtttattcttggattggataccgagttt 4462828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 7485666 - 7485532
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||| ||| ||||||||||||  || ||||||    |||||  ||| |||||||  | |||| |||||||| ||||||||||| |    
T  7485666 tcaggttcgattccctctgatgccaatttcggtgggctaagttcata----gcttgatctggctttaaacaggcccctgcaagtggccggtgggattggt 7485571  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| ||||||||||| |||||||||||||||| |||||||    
T  7485570 ccc-tcggattagtcgattcttggatcggataccgagttt 7485532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7470356 - 7470244
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||  ||| ||||||||||||  || |||||||||||||||  ||| ||||||| ||  ||| |||||||||| ||||||||| |    
T  7470356 tcaggttcgattccctctaatgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacggggccctgcaagtgggcagtgggattggt 7470257  T
Q  99 cccctcggattag 111  Q
    |||||| ||||||    
T  7470256 cccctcagattag 7470244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 34492712 - 34492576
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttccc 101  Q
    ||||||||||||||| ||| ||||||| ||||  || | ||||||||||||||| |  ||||||| ||  ||||||||||||||||||||||||| |||     
T  34492712 gttcgattccctctgctgccaatttcgttgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcca 34492613  T
Q  102 ctcggattagtcaattcttggatcggataacgagttt 138  Q
     || |||||||  ||||||||||| |||| |||||||    
T  34492612 ttcagattagttgattcttggatctgataccgagttt 34492576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 52455790 - 52455650
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||| | ||||  || |  | |||||||||||| |  ||||||| ||  ||||||||||||   ||||||||||     
T  52455790 tcaggttcgattccctctggtgccaattttgatgggctaagtctacacagagcttgctctgactttaaacggggcccccgcaagtgactggtgggattgg 52455691  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||| ||||| |||||||    
T  52455690 tcccctcggattagtcgattcttggattggataccgagttt 52455650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 8958173 - 8958036
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaat--ggccccccgcaagtgggcggtgggattgttcc 100  Q
    |||||||| |||||||||  ||||| ||||||  || | |||||| |||||||| |  |||||||   || ||||||||||||||||||||||||| |||    
T  8958173 gttcgatttcctctggtgtcaattttggtgggctaagtccatacaaagcttgctctagctttaaaatggggcccccgcaagtgggcggtgggattggtcc 8958074  T
Q  101 cctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||||| || ||||||||||| |||| |||||||    
T  8958073 cctctgattaatcgattcttggatcagataccgagttt 8958036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 17579277 - 17579136
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||| |||| ||||| ||| |||||| ||||||  || | ||||||||||||||| |  ||||||| ||  ||| |||||||||||||||| |||||    
T  17579277 tcaggtttgatttcctctagtgttaattttggtgggctaagtccatacagagcttgctttagctttaaacgggaccctccgcaagtgggcggtgagattg 17579178  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     ||||||| |||||||| ||| |||||||| ||| |||||||    
T  17579177 gtcccctcagattagtcgatttttggatcgaatatcgagttt 17579136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 54475814 - 54475877
Alignment:
Q  75 ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||| |||||||    
T  54475814 ccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagttt 54475877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1178228 - 1178366
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg---ctgtctttaaatggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| | ||||||| |||||||||||| ||  | |||||||| |||    ||| ||||||||||  |||| || ||||||||||||||||     
T  1178228 tcaggttcgattctccctggtgccaatttcggtgggcaag-tccatacagaactttgctctggctttaaatggggccccacacgtgggcggtgggattgg 1178326  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||||||||||| | |||||||||||||| |||||||    
T  1178327 tccc-tcggattagtcgaatcttggatcggataccgagttt 1178366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26108348 - 26108445
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggatt 95  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||||||||  ||| |||||||  || ||||||||||||||| ||||||||    
T  26108348 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggctgtgggatt 26108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 26158941 - 26158999
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||    
T  26158941 cccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggata 26158999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 48105007 - 48105073
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||| ||||||||||||| ||||| |||| ||||||||||| |||||||||||||||| |||||||    
T  48105007 cccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 55371357 - 55371303
Alignment:
Q  76 cgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  55371357 cgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggata 55371303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 4048085 - 4048146
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||||||| |||||||||||||||  |||||||||||||||| |||||||    
T  4048085 gcaagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagttt 4048146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 50731298 - 50731238
Alignment:
Q  78 caagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||| ||||||| |||||||| || ||||||||||||| |||||||    
T  50731298 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttt 50731238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 50781556 - 50781616
Alignment:
Q  78 caagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||| ||||||| |||||||| || ||||||||||||| |||||||    
T  50781556 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttt 50781616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 51532849 - 51532960
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttccc 101  Q
    ||||||||| ||||  ||| ||||||||||||  || | ||||||||||||||| |  ||||||||||  ||||||||||||| ||||||||||| ||||    
T  51532849 gttcgattctctctaatgccaatttcggtgggctaagtccatacagagcttgctctaactttaaatgggacccccgcaagtggacggtgggattggtccc 51532948  T
Q  102 ctcggattagtc 113  Q
    ||| ||||||||    
T  51532949 ctcagattagtc 51532960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 4252464 - 4252405
Alignment:
Q  71 ccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||| ||||||| ||||||||||| |||||||||||||||| || |||||||||||||    
T  4252464 ccccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggata 4252405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 1692963 - 1693029
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||   |||||| |||||||| ||||||| |||||||| |||||||    
T  1692963 cccccgcaagtgggcggtgggatttgccccctcagattagtcgattcttgaatcggataccgagttt 1693029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 11390658 - 11390790
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct--gtctttaaatggcccc-ccgcaagtgggcggtgggattgt 97  Q
    ||||||| |||| |||||||||  ||||| ||||||  || | |||||||||||||||  ||||||||||||  || |||||| ||    ||| |||| |    
T  11390658 tcaggtttgatttcctctggtgtcaattttggtgggctaagtccatacagagcttgctctgtctttaaatgggtcctccgcaaatgattcgtgagattat 11390757  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| ||||||||||||||||    
T  11390758 tcccctcggattagtcgattcttggatcggata 11390790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 48972852 - 48972715
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||||| ||||| || |||||| |||| |||  ||| ||||||| ||  |||  |||||||| ||||  |||| |    
T  48972852 tcaggttcgattccctctggtgccaatttcgatgggttaagttcatatagagtttgctctgactttaaacggatccc--caagtggggggtgaaattggt 48972755  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||  ||| ||||||| ||||||| |||||||| |||||||    
T  48972754 ccattcgaattagtcgattcttgaatcggataccgagttt 48972715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 3747730 - 3747777
Alignment:
Q  91 ggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttt 3747777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 25017620 - 25017684
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||||||||||| |  ||| ||||||||| |||||||||||| ||| |||||||    
T  25017620 ccccgcaagtgggcggtgggattggt-tccttggattagtcgattcttggatcgaataccgagttt 25017684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 53288853 - 53288725
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgc--tgtctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||| ||||||||||||||||| |||||||||||   || | |||||| |||||||  || ||||||| ||  ||||||||  || ||||| ||||  |    
T  53288853 tcaggctcgattccctctggtgccaatttcggtggactaagtccatacaaagcttgctttggctttaaacggggccccgcaaacggacggtgagattagt 53288754  T
Q  99 cccctcggattagtcaattcttggatcgg 127  Q
    ||||||| ||||||| ||| |||||||||    
T  53288753 cccctcgaattagtcgattattggatcgg 53288725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 6041739 - 6041671
Alignment:
Q  70 gccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| ||| ||||||||| ||||||||||||  ||||||||  |||||||||| |||| |||||||    
T  6041739 gcccccctcaaatgggcggtgagattgttccccttagattagtcggttcttggatcagataccgagttt 6041671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 33793584 - 33793624
Alignment:
Q  74 cccgcaagtgggcggtgggattgttcccctcggattagtca 114  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  33793584 cccgcaagtggacggtgggattggtcccctcggattagtca 33793624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 34844496 - 34844548
Alignment:
Q  61 ctttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtc 113  Q
    |||||||||| |||||||||||||  ||||||||||  |||||||||||||||    
T  34844496 ctttaaatgggcccccgcaagtggatggtgggattggacccctcggattagtc 34844548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 654845 - 654706
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| || ||||||||||||||||||||||||| |    
T  654845 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccgcaagtgggcggtgggattggt 654746  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||  ||||||||||||||| |||||||    
T  654745 cccctcggattagtcggttcttggatcggataccgagttt 654706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 7275337 - 7275477
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  |||||||  || |||||||||||||||||||||||||     
T  7275337 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattgg 7275436  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  7275437 tcccctcggattagtcgattcttggatcggataccgagttt 7275477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21835211 - 21835351
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  21835211 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 21835310  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  21835311 tcccctcggattagtcgattcttggatcggatatcgagttt 21835351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22119948 - 22120088
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  22119948 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 22120047  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  22120048 tcccctcggattagtcgattcttggatcggataccgagttt 22120088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 40543051 - 40542911
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  40543051 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 40542952  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  40542951 tcccctcggattagtcgattcttggatcggataccgagttt 40542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2751331 - 2751471
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||||||| |||||||||||||||     
T  2751331 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattgg 2751430  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  2751431 tcccctcggattagtcgattcttggatcggataccgagttt 2751471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 7176003 - 7175871
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  |||||||  || |||||||||||||||||||||||||     
T  7176003 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacaggacccccgcaagtgggcggtgggattgg 7175904  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| ||||||||||||||||    
T  7175903 tcccctcggattagtcgattcttggatcggata 7175871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 11997909 - 11998049
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||| ||  || | |||||| |||||||| |  ||||||| ||| |||||||||||||||||||||||||     
T  11997909 tcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagcttgctctggctttaaactgggcccccgcaagtgggcggtgggattgg 11998008  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||||||||||||| |||||||    
T  11998009 tcccctcgaattagtcgattcttggatcggataccgagttt 11998049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21217974 - 21217834
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg-ccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||| ||| ||||||||||||  || | ||||||||||||||| |  ||||||| || |||||| |||||||||||||||||||     
T  21217974 tcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagcttgctctagctttaaacgggccccccacaagtgggcggtgggattga 21217875  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  21217874 tcccctcggattagttgattcttggatcggataccgagttt 21217834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 17197087 - 17196951
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttccc 101  Q
    ||||||||||||||||||| |||||||||| |  || | ||||||||||||||| |  ||||||| ||  ||||||||||||||||||||||||| ||||    
T  17197087 gttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc 17196988  T
Q  102 ctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||||||| |||||||||||||||| |||||||    
T  17196987 ctcgaattagtcgattcttggatcggataccgagttt 17196951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 29861730 - 29861870
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||| |||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  29861730 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattga 29861829  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||| ||||||||| |||||||    
T  29861830 tcccctcgaattagtcgattcttagatcggataccgagttt 29861870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 10091248 - 10091387
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcc-ccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||||| || ||||||||||||  || | ||||||||||||||| |  ||||||||||   ||||||||||||||||||||||||     
T  10091248 tcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattga 10091347  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||| |||| |||| |||||||    
T  10091348 tcccctcggattagtcgattctt-gatccgataccgagttt 10091387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 16374054 - 16374194
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgc--tgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    |||| |||||||||||||||||| ||||||||||||| || | ||||||||  ||||  || |||||||  || ||||||||| ||| |||||||||||     
T  16374054 tcagattcgattccctctggtgccaatttcggtgggttaagtccatacagaatttgctatggctttaaacgggacccccgcaaatggacggtgggattgg 16374153  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  16374154 tcccctcggattagtcgattcttggatcggataccgagttt 16374194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 22703546 - 22703678
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||  ||||||||||||  || | |||||| |||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  22703546 tcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattgg 22703645  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| |||||| |||||||||    
T  22703646 tcccctcggattagtcgattctttgatcggata 22703678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22638352 - 22638488
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccc-ccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||||||||||||||||| || ||||    ||||||||| |  ||||||| ||  || ||||||||||||||||||||||     
T  22638352 tcaggttcgattccctctggtgctaatttcggtgggttaagttca----gagcttgctctggctttaaacggggcctccgcaagtgggcggtgggattga 22638447  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    || ||||| ||||||| |||||||||||||||| |||||||    
T  22638448 tctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 23012647 - 23012509
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttc 99  Q
    ||||| |||||||||| |||| ||||||||||||  || | ||||||||||||||| |  ||||||||||  ||||| ||||||||||||||||||| ||    
T  23012647 aggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccacaagtgggcggtgggattggtc 23012548  T
Q  100 ccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| |||||||||||| | ||||||||| |||||||    
T  23012547 ccctcgtattagtcaattcattgatcggataccgagttt 23012509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 28089876 - 28090019
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcataca----gagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggat 94  Q
    ||||||||||| ||||||||||  ||||||||||||  || | ||||||    ||||||||| |  |||||||||| |||||||||||||||| || |||    
T  28089876 tcaggttcgataccctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctctggctttaaatgggcccccgcaagtgggcgatgagat 28089975  T
Q  95 tgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    || |||||||||||||||| |||||||||||||||| |||||||    
T  28089976 tggtcccctcggattagtcgattcttggatcggataccgagttt 28090019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2103115 - 2103253
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||||| || ||||||||||||  || | |||||||||||||  ||| |||||||| || |||||||||||||||||||||||||     
T  2103115 tcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgggattgg 2103214  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | |||||||||||||| |||| | ||||||||| |||||||    
T  2103215 t-ccctcggattagtcgattcat-gatcggataccgagttt 2103253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 28950931 - 28951071
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccc-cgcaagtgggcggtgggattgt 97  Q
    |||||||||| |||||||||||| ||||||||||||  || |||||| |||||||||| |  ||||||| ||  ||| ||||||| |||||||||||||     
T  28950931 tcaggttcgactccctctggtgccaatttcggtgggctaagttcatatagagcttgctctggctttaaacgggtccctcgcaagtcggcggtgggattgg 28951030  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| | ||| |||||||||||||||||| |||||||    
T  28951031 tcccctcgaactagacaattcttggatcggataccgagttt 28951071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 18044168 - 18044307
Alignment:
Q  2 caggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||| |||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||| |||||||| ||||| |||| |    
T  18044168 caggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggtggtggaattggt 18044267  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| |||||||| |||||||||||||||| |||||||    
T  18044268 cccctcagattagtcgattcttggatcggataccgagttt 18044307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 27704062 - 27704201
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||| ||| |||||| ||||||||||||  || | |||| |||||||||| |  |||||||||| |||||||||||||| |||| ||||| |    
T  27704062 tcaggttcgatttcctttggtgccaatttcggtgggctaagtccatagagagcttgctttggctttaaatggacccccgcaagtgggtggtgtgattgat 27704161  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| |||||||| ||||||| ||| |||| |||||||    
T  27704162 cccctcagattagtcgattcttgaatcagataccgagttt 27704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 3851891 - 3851957
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  3851891 cccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttt 3851957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 23092167 - 23092296
Alignment:
Q  12 tccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttcccctcggat 108  Q
    |||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||||||| ||| ||||||||||| |||||||||||    
T  23092167 tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggat 23092266  T
Q  109 tagtcaattcttggatcggataacgagttt 138  Q
    ||||| |||| ||||||||||| |||||||    
T  23092267 tagtcgattcatggatcggataccgagttt 23092296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 27312212 - 27312352
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||| |||| ||||||| || |  || | |||||||||||  || |  ||||||| ||  |||||||||||||||||||||||||     
T  27312212 tcaggttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctacctctgactttaaacggagcccccgcaagtgggcggtgggattgg 27312311  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| |||||||| |||||||||||||||| |||||||    
T  27312312 tcccctcagattagtcgattcttggatcggataccgagttt 27312352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 31273978 - 31274113
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcccc 102  Q
    |||||||||||||||| ||||||||||| |||  || | ||||||||||||||| |  ||||||| ||  | |||||||||||| ||| ||||| |||||    
T  31273978 gttcgattccctctggagctaatttcggcgggctaagtccatacagagcttgctctggctttaaacggggctccgcaagtgggcagtgagattggtcccc 31274077  T
Q  103 tcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| ||||||| ||||||||| |||||| |||||||    
T  31274078 tcgaattagtcgattcttggaccggataccgagttt 31274113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 31712965 - 31712903
Alignment:
Q  76 cgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  31712965 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 31712903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 41907654 - 41907515
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatg-gccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| |||||| |||||  || | ||||||||| |||  ||| ||||||| | | |||||||||||||| ||||||||||     
T  41907654 tcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagaggttgctctggctttaaacgtggcccccgcaagtgggtggtgggattgg 41907555  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||| | |||||||| |||||||||||||||| |||||||    
T  41907554 tcccc-cagattagtcgattcttggatcggataccgagttt 41907515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 25333534 - 25333593
Alignment:
Q  69 ggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcgga 128  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  25333534 ggccccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga 25333593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 27009419 - 27009560
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgc-aagtgggcggtgggattg 96  Q
    ||||||||||| ||||||||||| ||||||||||||  || | |||||||||||||  ||| |||||||  || |||| || |||||| |||||||||||    
T  27009419 tcaggttcgatcccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccctgcaaagtggacggtgggattg 27009518  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     |||||||  ||||||| |||||||||| ||||| |||||||    
T  27009519 gtcccctcaaattagtcgattcttggattggataccgagttt 27009560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 31197724 - 31197790
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||| |||||||    
T  31197724 cccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttt 31197790  T

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Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2344359 - 2344499
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||| ||||||||| |||||||| ||||| ||||||  || | ||||||||||||  | |  ||||||| ||  |||||||||||| ||||||||||||     
T  2344359 tcagattcgattccttctggtgccaattttggtgggctaagtccatacagagctttttttggctttaaacgggacccccgcaagtgagcggtgggattgg 2344458  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||  | ||||||||||||| |||||||    
T  2344459 tcccctcggattagtcggtccttggatcggataccgagttt 2344499  T

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Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19421291 - 19421431
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccc-cccgcaagtgggcggtgggattgt 97  Q
    |||||||||||| | |||||||  ||||||| ||||  || | ||||||||||||||| |  ||||||||||  | ||| |||||||||||||||||||     
T  19421291 tcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagcttgctctgactttaaatggggcgcccacaagtgggcggtgggattgg 19421390  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    || ||||||||||||| ||||||| ||| |||| |||||||    
T  19421391 tctcctcggattagtcgattcttgaatcagataccgagttt 19421431  T

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Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 39145790 - 39145661
Alignment:
Q  4 ggttcgattccctctggtgctaatttcggtgggtaaaattcata-cagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcc 100  Q
    ||||||||||||| |||||| ||||||||||||  || |  ||| ||||||||||| |  ||||||| || |||| |||||||| ||||||||||| |||    
T  39145790 ggttcgattccctgtggtgccaatttcggtgggctaagtcaataacagagcttgctctggctttaaacgggcccctgcaagtggacggtgggattggtcc 39145691  T
Q  101 cctcggattagtcaattcttggatcggata 130  Q
    ||||| ||||||| ||||||| ||| ||||    
T  39145690 cctcgaattagtcgattcttgaatcagata 39145661  T

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Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 42913580 - 42913514
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| ||||||||||| |||||||||||||||  |||||| ||||||||| |||||||    
T  42913580 cccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttt 42913514  T

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Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 17212113 - 17212245
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccccc-gcaagtgggcggtgggattgt 97  Q
    |||||||| |||| ||||||||| ||||||||||||  || | ||||||||| ||||| |  ||| ||| ||  |||| ||||||| | ||||||||||     
T  17212113 tcaggttcaattctctctggtgccaatttcggtgggctaagtccatacagagattgctctggcttaaaacgggacccctgcaagtgagtggtgggattgg 17212212  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| ||||||||||| ||||    
T  17212213 tcccctcggattagtcgattcttggatcagata 17212245  T

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Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 8943469 - 8943410
Alignment:
Q  71 ccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||||||| ||||| |||||| | ||||||| ||||||||||||||||    
T  8943469 ccccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggata 8943410  T

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Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 32849732 - 32849791
Alignment:
Q  79 aagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||||| ||||||| |||||||| |||||||||||||||| |||||||    
T  32849732 aagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 33137903 - 33137826
Alignment:
Q  61 ctttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||  ||| ||||||||||||||  |||| |||||||| ||||||| |||||| ||||||||| |||||||    
T  33137903 ctttaaatggggccctgcaagtgggcggtgaaattggtcccctcgaattagtcgattcttagatcggatatcgagttt 33137826  T

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Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 36772420 - 36772304
Alignment:
Q  25 aatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttg 121  Q
    ||||||||||||  || ||||||||||||||||| |  ||||||| ||  ||||||  |||||||||||| |||  ||| |||||||||||| ||||||     
T  36772420 aatttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattcttt 36772321  T
Q  122 gatcggataacgagttt 138  Q
    ||||||||| |||||||    
T  36772320 gatcggataccgagttt 36772304  T

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Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 23330803 - 23330740
Alignment:
Q  75 ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||  ||||| |||||||  |||||||||| ||||||||||||| |||||||    
T  23330803 ccgcaagtgggcggtaagattggtcccctcaaattagtcaatccttggatcggataccgagttt 23330740  T

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Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 28647029 - 28647169
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg---ctgtctt-taaatggccccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||||||||||| |||||||||||| ||  |  |||||||| ||    ||| ||| |||  || ||||| |||||||||||||||||||    
T  28647029 tcaggttcgattccctctggtgccaatttcggtgggcaag-tcaatacagagttttgctctggcttataacggggcccccacaagtgggcggtgggattg 28647127  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     | |||||| |||||||  | ||||||||||||| |||||||    
T  28647128 gttccctcgaattagtctgtccttggatcggatatcgagttt 28647169  T

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Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 21574169 - 21574103
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||| ||||| ||||||| ||||| ||||||||||||||||  | ||||||||||||| |||||||    
T  21574169 cccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagttt 21574103  T

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Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7799973 - 7799916
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct 58  Q
    ||||||||||||||||||||||| |||||| |||||| || | |||| ||||||||||    
T  7799973 tcaggttcgattccctctggtgccaatttcagtgggttaagtccatagagagcttgct 7799916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 43785363 - 43785303
Alignment:
Q  75 ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgag 135  Q
    |||||||||| ||||| ||||| |||||| ||||||||| ||| |||||||||||| ||||    
T  43785363 ccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcggataccgag 43785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 22696454 - 22696521
Alignment:
Q  71 ccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||||||| ||||| ||||||| ||| ||||||||||||  | ||||||||||||| |||||||    
T  22696454 ccccgcgcaagtaggcggcgggattggtcctctcggattagtcggtccttggatcggataccgagttt 22696521  T

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Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 1766210 - 1766153
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||| |||||||||||| |||||| ||||||||||||||||  | |||| ||||||||    
T  1766210 ccccacaagtgggcggttggattggtcccctcggattagtcggtacttgaatcggata 1766153  T

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Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 6491675 - 6491724
Alignment:
Q  9 gattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct 58  Q
    ||||||||||||||  ||||||| ||||  ||||||||||||||||||||    
T  6491675 gattccctctggtgtcaatttcgatgggctaaattcatacagagcttgct 6491724  T

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Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 9683961 - 9684014
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcg 126  Q
    |||| |||||||||||| |||| | ||||||||||||| || ||||||||||||    
T  9683961 ccccacaagtgggcggtaggataggtcccctcggattaatcgattcttggatcg 9684014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 30345564 - 30345511
Alignment:
Q  84 ggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagtt 137  Q
    ||||||||||||| ||||||||| ||||||  ||||| ||||||||| ||||||    
T  30345564 ggcggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

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Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42814924 - 42814981
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct 58  Q
    ||||||||||||||||||||||  ||||||||||||  || | |||||| ||||||||    
T  42814924 tcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgct 42814981  T

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Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 4718705 - 4718845
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  4718705 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 4718804  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  4718805 tcccctcggattagtcgattcttggatcggataccgagttt 4718845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 28193534 - 28193674
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccg-caagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||| || | ||||||||||||||| |  ||||||| ||  ||||  |||||||||||||||||||     
T  28193534 tcaggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctacaagtgggcggtgggattgg 28193633  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  28193634 tcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 34237796 - 34237656
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||| ||||||||||||     
T  34237796 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgagcggtgggattgg 34237697  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  34237696 tcccctcggattagtcgattcttggatcggataccgagttt 34237656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39349316 - 39349448
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  39349316 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattga 39349415  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| ||||||||||||||||    
T  39349416 tcccctcggattagtcgattcttggatcggata 39349448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 3734764 - 3734624
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||||||| ||||| |||||||||     
T  3734764 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcagtgggattgg 3734665  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  3734664 tcccctcggattagtcgattcttggatcggataccgagttt 3734624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 8765667 - 8765527
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccc-cccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||| ||||  || | ||||||||||||||| |  ||||||| ||  | |||||||||||||||||||||||     
T  8765667 tcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattgg 8765568  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  8765567 tcccctcggattagtcgattcttggatcggataccgagttt 8765527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21603290 - 21603430
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| |||||| ||||||||||||  ||   ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  21603290 tcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 21603389  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  21603390 tcccctcggattagtcgattcttggatcggataccgagttt 21603430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 32879339 - 32879479
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || ||||||||||||||||| |  | ||||| ||  ||||| |||||||||||||||||||     
T  32879339 tcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctgacattaaacggggcccccacaagtgggcggtgggattgg 32879438  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||| ||||| |||||||    
T  32879439 tcccctcggattagtcgattcttggattggataccgagttt 32879479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 2618249 - 2618386
Alignment:
Q  4 ggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttcc 100  Q
    |||||||||||||||||||| |||||| |||||  || | ||||||||||||||| |  ||||||| ||  ||||||||||||||||||||||||| |||    
T  2618249 ggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggtcc 2618348  T
Q  101 cctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| |||||||||||||||  |||||||    
T  2618349 cctcggattagtcgattcttggatcggattccgagttt 2618386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 6953148 - 6953009
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||||||||  ||| |||||||  || ||||||||||| |||||||||||||     
T  6953148 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagttggcggtgggattgg 6953049  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | |||||||||||||| |||||||||||| ||| |||||||    
T  6953048 t-ccctcggattagtcgattcttggatcgaataccgagttt 6953009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15259547 - 15259407
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||  ||||     
T  15259547 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgtaattgg 15259448  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||||||||||||  |||||||    
T  15259447 tcccctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20305968 - 20306108
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||| ||||||||| |||||||| ||||||| ||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  20305968 tcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattgg 20306067  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| || ||||||||||||| |||||||    
T  20306068 tcccctcgaattagtcgatccttggatcggataccgagttt 20306108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21092601 - 21092741
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||| ||||||||| |||||||| ||||||| ||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  21092601 tcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattgg 21092700  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| || ||||||||||||| |||||||    
T  21092701 tcccctcgaattagtcgatccttggatcggataccgagttt 21092741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 28088346 - 28088478
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccc-ccgcaagtgggcggtgggattgt 97  Q
    |||| ||||||||||| |||||  ||||||||||||| || | ||||||||||||||| |  ||||||||||  || ||||||||||||||||||||||     
T  28088346 tcagattcgattccctttggtgtcaatttcggtgggttaagtccatacagagcttgctctgactttaaatggggcctccgcaagtgggcggtgggattga 28088445  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    ||||||| || ||||| ||||||||||||||||    
T  28088446 tcccctcagaatagtcgattcttggatcggata 28088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 42643259 - 42643119
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct--gtctttaaatggcc-ccccgcaagtgggcggtgggattgt 97  Q
    |||| ||||||||||||| |||| ||||||||||||  || | |||||||||||||||  ||||| ||| ||   ||||||||||||||||||||||||     
T  42643259 tcagattcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctgtcttgaaacgggggccccgcaagtgggcggtgggattgg 42643160  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||  |||||||||||||||| |||||||    
T  42643159 tcccctcgcattagttgattcttggatcggataccgagttt 42643119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19471669 - 19471810
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||| ||||||||||||||| ||||| |||| |  || | ||||||||||||||| |  ||||||| ||  ||||||||||||||||| ||||||||    
T  19471669 tcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattg 19471768  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     |||||||| ||||||| || ||||||||||||| |||||||    
T  19471769 gtcccctcgaattagtcgatacttggatcggataccgagttt 19471810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19542593 - 19542734
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||| ||||||||||||||| ||||| |||| |  || | ||||||||||||||| |  ||||||| ||  ||||||||||||||||| ||||||||    
T  19542593 tcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattg 19542692  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     |||||||| ||||||| || ||||||||||||| |||||||    
T  19542693 gtcccctcgaattagtcgatacttggatcggataccgagttt 19542734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 19590103 - 19589962
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||| ||||||||||||||| ||||| |||| |  || | ||||||||||||||| |  ||||||| ||  ||||||||||||||||| ||||||||    
T  19590103 tcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattg 19590004  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     |||||||| ||||||| || ||||||||||||| |||||||    
T  19590003 gtcccctcgaattagtcgatacttggatcggataccgagttt 19589962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 2639478 - 2639412
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  2639478 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 2639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 42328064 - 42328204
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||| ||||||||||| ||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||| ||||||| || ||||||||     
T  42328064 tcaggtttgattccctctgttgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacgatgggattgg 42328163  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||||||||||||| |||||||    
T  42328164 tcccctcgaattagtcgattcttggatcggataccgagttt 42328204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 264540 - 264409
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||||||||| |||| ||||||||||||  || |  ||||| |||||||| |  ||||||| || ||||| ||| ||||||||| ||||| |    
T  264540 tcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacgggcccccacaaatgggcggtgagattgat 264441  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    ||||||| ||||||| ||||||||||||||||    
T  264440 cccctcgaattagtcgattcttggatcggata 264409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 651381 - 651512
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||||||||| |||| ||||||||||||  || |  ||||| |||||||| |  ||||||| || ||||| ||| ||||||||| ||||| |    
T  651381 tcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacgggcccccacaaatgggcggtgagattgat 651480  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    ||||||| ||||||| ||||||||||||||||    
T  651481 cccctcgaattagtcgattcttggatcggata 651512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 837116 - 837247
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||||||||| |||| ||||||||||||  || |  ||||| |||||||| |  ||||||| || ||||| ||| ||||||||| ||||| |    
T  837116 tcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacgggcccccacaaatgggcggtgagattgat 837215  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    ||||||| ||||||| ||||||||||||||||    
T  837216 cccctcgaattagtcgattcttggatcggata 837247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 25248409 - 25248546
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||  ||||||||| ||  || | ||||||||| ||||| |  ||||||| || ||| ||||||||||||||||||||| |    
T  25248409 tcaggttcgattccctctggtgtcaatttcggtaggctaagt-catacagagtttgctctggctttaaacgggccctcgcaagtgggcggtgggattggt 25248507  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||| ||| || ||||||||| |||||||    
T  25248508 cccctcggattagtcgatt-tttgatcggataccgagttt 25248546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 34610826 - 34610688
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatg-gccccccgcaagtgggcggtgggattgttc 99  Q
    ||||||||||||||||| ||| |||||||||||   || |  |||||||||||||| |  ||||||| | ||||| |||||||||||||| | |||| ||    
T  34610826 aggttcgattccctctgatgccaatttcggtggtctaagtctatacagagcttgctctggctttaaacgagcccctcgcaagtgggcggtagaattggtc 34610727  T
Q  100 ccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| ||||||| |||||||||||||||| |||||||    
T  34610726 ccctcgaattagtcgattcttggatcggataccgagttt 34610688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 4698864 - 4698724
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||  ||||||||||||  || | |||  ||| |||||| |  ||||||| ||  |||||||||||| ||||||||||||     
T  4698864 tcaggttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaacttgctctggctttaaacggagcccccgcaagtgagcggtgggattgg 4698765  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||| ||||| ||||| |||||||    
T  4698764 tcccctcggattagtcgattcatggattggataccgagttt 4698724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 14633014 - 14633146
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccc-ccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || |  |||||||||||||| |  |||| || ||  |  || |||||||||||||||||||     
T  14633014 tcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctggctttgaacggagcgtccacaagtgggcggtgggattgg 14633113  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||| ||||||||| ||||||||||||||||    
T  14633114 tccccttggattagtcgattcttggatcggata 14633146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 27746476 - 27746348
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatggccccccgcaagt-gggcggtgggattgt 97  Q
    |||||||||||||||| |||||| ||||||||||||  || | |||||||||||||  ||| ||||||| ||  |||| ||||| ||||| ||| |||      
T  27746476 tcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaaggggccccacaagtggggcgatggaattag 27746377  T
Q  98 tcccctcggattagtcaattcttggatcg 126  Q
    |||||||||||||||| ||||||||||||    
T  27746376 tcccctcggattagtcgattcttggatcg 27746348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2166759 - 2166896
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||||||||  |||| |||||| || ||  || | ||||||||||||||| |  ||||||||    |||||||||||||||||||||||| |    
T  2166759 tcaggttcgattccctc--gtgccaatttcagtaggctaagtccatacagagcttgctctggctttaaataagaccccgcaagtgggcggtgggattggt 2166856  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| |||||||| ||| || ||| ||||| |||||||    
T  2166857 cccctcagattagtcgattttttgattggataccgagttt 2166896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 7558029 - 7557952
Alignment:
Q  61 ctttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| || ||||||||||||| ||||||||||| |||||||| ||||||| ||| ||| |||||||| |||||||    
T  7558029 ctttaaacggacccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20469977 - 20470116
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||| | || ||||| | ||||  || | ||||||||||||||| |  |||||||  |  |||||||||||||||||||||||||     
T  20469977 tcaggttcgattccctctagagccaatttagatgggctaagtccatacagagcttgctctggctttaaacagagcccccgcaagtgggcggtgggattgg 20470076  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | || ||||||||||| ||| |||||||||||| |||||||    
T  20470077 ttcc-tcggattagtcgatttttggatcggataccgagttt 20470116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 26168989 - 26168862
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatg-gccccccgcaagtgggcggtgggattgt 97  Q
    ||||||| ||||||  ||| ||| |||||||||||| ||  |||||||||||||||  ||| ||||||||| ||||| |||||||||| | || |||||     
T  26168989 tcaggtttgattcctcctgatgccaatttcggtgggcaag-ttcatacagagcttgttctggctttaaatgagcccctcgcaagtgggggatgagattgg 26168891  T
Q  98 tcccctcggattagtcaattcttggatcg 126  Q
    |||||||||| ||||| ||||||||||||    
T  26168890 tcccctcggagtagtcgattcttggatcg 26168862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 10292188 - 10292254
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||| ||||||||||||||||||| |||| ||||||||||  |||||||||||| ||| |||||||    
T  10292188 cccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagttt 10292254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 18128647 - 18128713
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||  ||||||||||| ||| |||||||    
T  18128647 cccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagttt 18128713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 12312968 - 12313045
Alignment:
Q  61 ctttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||| |||||||  ||||| || |||| | |||||||    
T  12312968 ctttaaatgggcccccacaagtgggcggtgggattgatcccctcgaattagtcggttcttagagcggaaaccgagttt 12313045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 13749187 - 13749248
Alignment:
Q  69 ggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||||| |||| |||| ||||||||||||||||| | |||||||| ||||    
T  13749187 ggccccccgcaagtgggcagtggaattggtcccctcggattagtcagtccttggatcagata 13749248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 28964097 - 28964220
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagct-tg-ctgtctttaaatggc-cccccgcaagtgggcggtgggattgttccc 101  Q
    |||||||||| |||||||| ||||||||||||  || | ||||| ||||| || ||| ||||||| ||  ||||||||||||||| ||||||||| ||||    
T  28964097 gttcgattccatctggtgccaatttcggtgggctaagtccatacggagctatgtctggctttaaacggggcccccgcaagtgggc-gtgggattggtccc 28964195  T
Q  102 ctcggattagtcaattcttggatcg 126  Q
    |||| ||||||| |||||| |||||    
T  28964196 ctcgaattagtcgattcttagatcg 28964220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 21667610 - 21667731
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatgg-ccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||| ||| |||||||||||||||||||  || | |||||||||||||  ||| ||||||| ||  |  ||||||||||||||||| ||||     
T  21667610 tcaggttcgatttcctttggtgctaatttcggtgggctaagtccatacagagcttgctctgcctttaaacggagcatccgcaagtgggcggtggaattgg 21667709  T
Q  98 tcccctcggattagtcaattctt 120  Q
    | ||||| |||||||| ||||||    
T  21667710 t-ccctcagattagtcgattctt 21667731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 33747016 - 33747082
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| |||||| |||| | | |||||||||||| || ||||||||||||| |||||||    
T  33747016 cccccgcaagtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagttt 33747082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 34694715 - 34694576
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagc-ttgct--gtctttaaatgg--ccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||| |||||||| ||||||||||||  ||||||||||| ||| |||||  | |||  || ||   ||||| | ||||| |||||||||||     
T  34694715 aggttcgattccatctggtgccaatttcggtggg-caaattcatacaaagctttgctccggcttagaacggaatccccctctagtggacggtgggattgg 34694617  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| ||||||||  | |||||||||||||||||||||    
T  34694616 tcccctcagattagtctgtccttggatcggataacgagttt 34694576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 24999296 - 24999392
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||||| ||| ||||| | ||||  || |||||| |||||||||| |  ||||||| ||  |||||||||||||||||||||||||    
T  24999296 aggttcgattccctctgatgccaattttgatgggctaagttcatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 24999392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 9713609 - 9713654
Alignment:
Q  93 attgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||| |||||||||||| |||||||||||||||| |||||||    
T  9713609 attggtccactcggattagtcgattcttggatcggataccgagttt 9713654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 16990722 - 16990775
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||||| || |||||| |||||||||  | |||||||||||||    
T  16990722 gcaagtgggcggtgggactggtccccttggattagtcggtccttggatcggata 16990775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 24018518 - 24018583
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||||||||||||| ||||| |||||| | |||||||  |||||||| |||||| |||||||    
T  24018518 ccccacaagtgggcggtgagattggtccccttgaattagtcggttcttggaccggatatcgagttt 24018583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 43817816 - 43817759
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggat 129  Q
    |||||||||||||||||||| |||| || ||||  |||| || |||||||||||||||    
T  43817816 cccccgcaagtgggcggtggaattggtctcctcaaattaatcgattcttggatcggat 43817759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 8484802 - 8484662
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||| ||||||||||||||| ||||||||||||  || ||||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  8484802 tcaggtttgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 8484703  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  8484702 tcccctcggattagtcgattcttggatcggataccgagttt 8484662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 38684264 - 38684395
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| || |||||||||||| |||||||||||| |    
T  38684264 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccgcaagtgagcggtgggattggt 38684363  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||| ||||||||||||||||    
T  38684364 cccctcggattagtcgattcttggatcggata 38684395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 18207263 - 18207403
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatg-gccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||| ||||| ||||||||||||  || | |||||||||||||  ||| ||||||| | | |||||||||||||||||||||||||     
T  18207263 tcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttgttctggctttaaacgaggcccccgcaagtgggcggtgggattgg 18207362  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  18207363 tcccctcggattagtcgattcttggatcggataccgagttt 18207403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 27498872 - 27498732
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||| |||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  27498872 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 27498773  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  27498772 tcccctcggattagtcgattcttggatcggataccgagttt 27498732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 19456350 - 19456212
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||| ||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||| |    
T  19456350 tcaggttcgat-ccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccgcaagtgggcggtgggattggt 19456252  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  19456251 cccctcggattagtcgattcttggatcggataccgagttt 19456212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 11926643 - 11926502
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||| ||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||||||||||||| ||||||||||    
T  11926643 tcaggttagattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggtggtgggattg 11926544  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     |||||||||||||||| |||||||||||||||| |||||||    
T  11926543 gtcccctcggattagtcgattcttggatcggataccgagttt 11926502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 30485884 - 30486024
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||  ||||||||||||  || | ||||||||||||||| |  ||||||| |   |||||||||||||||||||||||||     
T  30485884 tcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacgatgcccccgcaagtgggcggtgggattgg 30485983  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  30485984 tcccctcggattagtcaattcttggatcggataccgagttt 30486024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 19145549 - 19145413
Alignment:
Q  4 ggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg---ctgtctttaaatggccccccgcaagtgggcggtgggattgttcc 100  Q
    |||||||||||||||||||| |||||||||||| ||  | ||||||||||||    ||| |||||||||| ||||||||||||||||||||||||| |||    
T  19145549 ggttcgattccctctggtgccaatttcggtgggcaag-tccatacagagctttgctctggctttaaatggtcccccgcaagtgggcggtgggattggtcc 19145451  T
Q  101 cctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||   ||||||||||||||| |||||||    
T  19145450 cctcggattagttggttcttggatcggataccgagttt 19145413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15641246 - 15641107
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||||| || ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  15641246 tcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 15641147  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||| ||||||||| |||||||    
T  15641146 tcccctcggattagtcgattctt-gatcggataccgagttt 15641107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 32059581 - 32059441
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||| |||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  32059581 tcaggttcgattccttctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 32059482  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||  | ||||||||||||| |||||||    
T  32059481 tcccctcggattagtcggtccttggatcggataccgagttt 32059441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 11465048 - 11464917
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||| |||||||||| ||||| ||||||  || |||||||||||||| || |  ||||||| ||  ||||||||||||| |||||||||| |    
T  11465048 tcaggttcgatttcctctggtgccaattttggtgggctaagttcatacagagcttactctggctttaaacggggccccgcaagtgggtggtgggattggt 11464949  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    ||||||| ||||||| ||||||||||||||||    
T  11464948 cccctcgaattagtcgattcttggatcggata 11464917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 13108590 - 13108459
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg-ctgtctttaaa-tggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||| | ||||  || ||||||||||||  | ||| |||||||  || ||||||||||||||||||||||||| |    
T  13108590 tcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtctgcctttaaacggggcccccgcaagtgggcggtgggattgat 13108491  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    ||||||| ||||||| ||||||||||||||||    
T  13108490 cccctcgaattagtcgattcttggatcggata 13108459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 37495103 - 37495250
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccccc--------gcaagtgggcggtg 90  Q
    ||||||||||||||||||||||| ||||| ||||||  || | ||||||||||||||| |  ||||||| | ||||||        ||||||||||||||    
T  37495103 tcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgcccccccccccgcccgcaagtgggcggtg 37495202  T
Q  91 ggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||    
T  37495203 ggattggtcccctcggattagtcgattcttggatcggataccgagttt 37495250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 7085764 - 7085627
Alignment:
Q  4 ggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcc-ccccgcaagtgggcggtgggattgttcc 100  Q
    ||||||||||||||| |||  ||||||||||||  || | ||||||||||||||| |  ||||||| ||   |||||||||||||||||||||||| |||    
T  7085764 ggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggtccccgcaagtgggcggtgggattggtcc 7085665  T
Q  101 cctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| ||||||| |||||||| |||||||    
T  7085664 cctcggattagtcgattcttgaatcggataccgagttt 7085627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 33709638 - 33709512
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgtctttaaatggc-cccccgcaagtgggcggtgggattgttcccct 103  Q
    ||||||||||||||||||| ||||||||||||  || | |||||||||    ||| ||||||| ||  ||||| ||||||||||||||||||| ||||||    
T  33709638 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagagctctggctttaaacgggacccccacaagtgggcggtgggattggtcccct 33709539  T
Q  104 cggattagtcaattcttggatcggata 130  Q
    |||||||||| ||||||||||||||||    
T  33709538 cggattagtcgattcttggatcggata 33709512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 13038595 - 13038464
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgc-tgtctttaaatggc-cccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||| | ||||  || ||||||||||||  |  || ||||||| ||  ||||||||||||||||||||||||| |    
T  13038595 tcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtatggctttaaacggggcccccgcaagtgggcggtgggattgat 13038496  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    ||||||| ||||||| ||||||||||||||||    
T  13038495 cccctcgaattagtcgattcttggatcggata 13038464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 22693065 - 22693131
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  22693065 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 22693131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 6014421 - 6014281
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccc-cgcaagtgggcggtgggattgt 97  Q
    |||||||||||| | |||||||| ||||||||||||| || | ||||||||||||||| |  ||||||| ||   || ||||||||||||||| ||||      
T  6014421 tcaggttcgattacttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggtccacgcaagtgggcggtgagattag 6014322  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||||||||||||| |||||||    
T  6014321 tcccctcgaattagtcgattcttggatcggatatcgagttt 6014281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 10869706 - 10869574
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccc-ccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||| |||||| | ||||||||||||  || | || || ||||||||| |  ||||||||||  || ||||||||||||||||||||||     
T  10869706 tcaggttcgattccatctggttccaatttcggtgggctaagtccacactgagcttgctctggctttaaatggggcctccgcaagtgggcggtgggattgg 10869607  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||||  |||||||||||||||    
T  10869606 tcccctcggattagtcggttcttggatcggata 10869574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 31288083 - 31287947
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttccc 101  Q
    |||||||||||| |||||| ||||||||||||| || | |||||| |||||||| |  ||||||| ||  ||||||||||||||||||||||||| || |    
T  31288083 gttcgattccctttggtgccaatttcggtgggttaagtccatacaaagcttgctttgactttaaacggggcccccgcaagtgggcggtgggattggtctc 31287984  T
Q  102 ctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| |||||||  |||||||| |||||| |||||||    
T  31287983 ctcgaattagtcggttcttggaccggataccgagttt 31287947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 34310198 - 34310338
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||| ||||||  || | ||||||||||||||| |  ||||||| ||  |||||  |||||| |||||||||||     
T  34310198 tcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgggacccccataagtggacggtgggattgg 34310297  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| |||| || |||||||||||||||| |||||||    
T  34310298 tcccctcgaattaatcgattcttggatcggataccgagttt 34310338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 41351168 - 41351105
Alignment:
Q  75 ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  41351168 ccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 41351105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 38631046 - 38630980
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| |||||||    
T  38631046 cccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttt 38630980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 36954874 - 36955006
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg-ccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||| |||||||||| | |  || | ||||||||| ||||| |  |||||||||| |||||||||||||| | ||||||||      
T  36954874 tcaggttcgattccctctggttctaatttcggcgtgctaagtccatacagagtttgctttggctttaaatgggccccccgcaagtggactgtgggattag 36954973  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||  ||||||| ||||||||||||||||    
T  36954974 tcccctcatattagtcgattcttggatcggata 36955006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 35425082 - 35425201
Alignment:
Q  14 cctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttcccctcggatta 110  Q
    ||||| |||| ||||||||||||  || | ||||||||||| ||| |  ||||||| ||  ||||||||||||||||||||||||| ||| |||||||||    
T  35425082 cctctagtgccaatttcggtgggctaagtccatacagagctcgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggatta 35425181  T
Q  111 gtcaattcttggatcggata 130  Q
    ||| ||||||||||||||||    
T  35425182 gtcgattcttggatcggata 35425201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 42193541 - 42193671
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||| |||||| ||| ||||||||||||  || |  |||||||| ||||| |  |||||||||| |||| |||||||||||||||| ||| |    
T  42193541 tcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacagagtttgctttggctttaaatggacccc-gcaagtgggcggtggggttggt 42193639  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    || |||||||||||| ||||||||||| ||||    
T  42193640 cctctcggattagtcgattcttggatcagata 42193671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 13659312 - 13659254
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||    
T  13659312 cccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggata 13659254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 4603837 - 4603973
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccccc-gcaagtgggcggtgggattgttccc 101  Q
    |||||||||| |||||||| ||||||| ||||  || | ||||||||||| ||| |  ||||||| ||  |||| |||||||| ||||||||||| ||||    
T  4603837 gttcgattccttctggtgccaatttcgatgggctaagtccatacagagctcgctctggctttaaacggggcccctgcaagtggacggtgggattggtccc 4603936  T
Q  102 ctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||  | ||||||||||||| |||||||    
T  4603937 ctcggattagtcggtccttggatcggataccgagttt 4603973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 9659428 - 9659312
Alignment:
Q  25 aatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg-ccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttg 121  Q
    ||||||||||||  || | |||||| |||||||| |  |||||||||| |||||||||||||| ||||||||||| |||| ||||||||||  |||||||    
T  9659428 aatttcggtgggctaagtccatacacagcttgctctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattcttg 9659329  T
Q  122 gatcggataacgagttt 138  Q
    ||| ||||| |||||||    
T  9659328 gatgggataccgagttt 9659312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 12317224 - 12317156
Alignment:
Q  69 ggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||| |||||||    
T  12317224 ggccccccgcaagtgggtggtgggattgatccc-tcggattagtcaattcttagatcggataccgagttt 12317156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 27487616 - 27487563
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  27487616 gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggata 27487563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 5049193 - 5049320
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||| ||| |||||||||||| | ||||||| |||   || ||||||||||||||||| |  ||||||| || ||||||||| ||| ||||||||||| |    
T  5049193 tcagattcaattccctctggtaccaatttcgatggtctaagttcatacagagcttgctctggctttaaacgggcccccgcaaatggacggtgggattggt 5049292  T
Q  99 cccctcggattagtcaattcttggatcg 126  Q
    ||| ||| ||||||| ||||||||||||    
T  5049293 cccatcgaattagtcgattcttggatcg 5049320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 5067392 - 5067447
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcgga 128  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  5067392 ccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 21236429 - 21236363
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||  ||||||| |||||||| ||||||| |||||||| |||||||    
T  21236429 cccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagttt 21236363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 22392818 - 22392884
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||||||| |||| ||||||| |||||||| ||| |||||||||||| |||||||    
T  22392818 cccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttt 22392884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12398589 - 12398449
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| |||||  |||||||||||   || |||||||||||||||  ||| |||||||| || ||||||||| ||| ||||| |||||     
T  12398589 tcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagcttgctctggctttaaatggggcccccgcaaatggacggtgagattga 12398490  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| |||  |||||||  ||||||||| ||||| |||||||    
T  12398489 tcctctcaaattagtcggttcttggattggataccgagttt 12398449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 23270659 - 23270531
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttccc 101  Q
    |||||||| |||| | ||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||||||| ||| ||||||||||| ||||    
T  23270659 gttcgatttcctccgatgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaaatggacggtgggattggtccc 23270560  T
Q  102 ctcggattagtcaattcttggatcggata 130  Q
    |||||||||||  |||||||||| |||||    
T  23270559 ctcggattagttgattcttggattggata 23270531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15971263 - 15971144
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||| |||||| ||  ||||||||||||  || | |||||| |||||||| |  ||||||| ||  ||||||||||||||||||| |||||     
T  15971263 tcaggttcgatttcctctgatgtcaatttcggtgggctaagtccatacatagcttgctctgactttaaacgggacccccgcaagtgggcggtgagattga 15971164  T
Q  98 tcccctcggattagtcaatt 117  Q
    ||||||||||||| ||||||    
T  15971163 tcccctcggattaatcaatt 15971144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 36895558 - 36895621
Alignment:
Q  75 ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||| |||||||||| ||||| |||||||  ||||||||||||||| |||||||    
T  36895558 ccgcaagtgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagttt 36895621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 10631340 - 10631290
Alignment:
Q  88 gtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 10631290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 138
Target Start/End: Complemental strand, 25750741 - 25750614
Alignment:
Q  10 attccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgtctttaaatggccccccgcaagtgggcggtgggattgttcccctcggatt 109  Q
    ||||| |||||||| ||||||||||||| || | |||| |||||||||| |   | || ||  |||| |||||||| |||| ||||| |||| || ||||    
T  25750741 attccttctggtgccaatttcggtgggttaagtccatatagagcttgctctggcttaacgggacccc-caagtggggggtgagattggtcccttcagatt 25750643  T
Q  110 agtcaattcttggatcggataacgagttt 138  Q
    |||| |||||||||||||||| |||||||    
T  25750642 agtcgattcttggatcggataccgagttt 25750614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 26009402 - 26009265
Alignment:
Q  4 ggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttcc 100  Q
    ||||||||||||| |||||| |||||| |||||  || | ||| |||||||| || |  ||||||| ||  ||||||||||||||  ||||||||  |||    
T  26009402 ggttcgattccctttggtgccaatttcagtgggctaagtccatgcagagcttactctggctttaaacggggcccccgcaagtgggtagtgggattagtcc 26009303  T
Q  101 cctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||  |||||| |||| ||| |||||||    
T  26009302 cctcggattagtcggttcttgaatcgaatatcgagttt 26009265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25586988 - 25587045
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct 58  Q
    |||||||||||| |||||||||| ||||||||||||  || | |||||||||||||||    
T  25586988 tcaggttcgatttcctctggtgccaatttcggtgggctaagtccatacagagcttgct 25587045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 28614539 - 28614487
Alignment:
Q  86 cggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||| |||||||| ||||||| ||| |||||||||||| |||||||    
T  28614539 cggtgggattgatcccctcgaattagtcgatttttggatcggataccgagttt 28614487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1827671 - 1827616
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg 56  Q
    ||||||||||||||||||| | | ||||||||||||| || | |||||||||||||    
T  1827671 tcaggttcgattccctctgataccaatttcggtgggttaagtccatacagagcttg 1827616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 41084120 - 41084179
Alignment:
Q  79 aagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||| |||||| |||| |||||||||||  |||||| |||||||| |||||||    
T  41084120 aagtgggcggtaggattgatcccttcggattagtcggttcttgaatcggataccgagttt 41084179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 930549 - 930487
Alignment:
Q  76 cgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||| | ||| ||||| ||||||||||||||||  | ||||||||||||| |||||||    
T  930549 cgcaagtggacagtgtgattggtcccctcggattagtcggtccttggatcggatatcgagttt 930487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 15931115 - 15931149
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgg 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  15931115 tcaggttcgattccctctggtgccaatttcggtgg 15931149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 34049941 - 34050007
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| |||| |||||| |||||||||||||||  |||||   |||||||| |||||||    
T  34049941 cccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggataccgagttt 34050007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 42006868 - 42006921
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||| |||||||| || ||||||||  |||||| |||||||||    
T  42006868 gcaagtgggcggtggaattgttccacttggattagttgattctttgatcggata 42006921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 8821120 - 8821180
Alignment:
Q  78 caagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| |||||||||| || | ||| ||||||| ||||||||||| |||| |||||||    
T  8821120 caagtgggtggtgggattggtcacttcgaattagtctattcttggatcagataccgagttt 8821180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 25548599 - 25548535
Alignment:
Q  74 cccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||  |||||||||||| ||  |||| ||||||| |||||||||||| ||| |||||||    
T  25548599 cccgcaagtacgcggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagttt 25548535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 33737878 - 33737937
Alignment:
Q  78 caagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| ||||| ||||||||| |||||  ||||||| |||||||| |||||||    
T  33737878 caagtgggcggtgagattggtcccctcgg-ttagttgattcttgaatcggataccgagttt 33737937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 41568950 - 41568870
Alignment:
Q  58 tgtctttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||  |||||||| |||| |||||||||| ||||||  |||||||  ||| || |||| |||| |||||||    
T  41568950 tgtctttaaatggaaccccgcaaatgggtggtgggattggtcccctaagattagttgattattcgatcagatatcgagttt 41568870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 7766868 - 7766728
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||||||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  7766868 tcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaagtgggcggtgggattgg 7766769  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| ||||||| |||||||| |||||||    
T  7766768 tcccctcggattagtcgattcttgaatcggatatcgagttt 7766728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 4621378 - 4621238
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcc-ccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||   ||||||||||||||||||||||||     
T  4621378 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattgg 4621279  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  4621278 tcccctcggattagtcgattcttggatcggataccgagttt 4621238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24122079 - 24122219
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccc-cccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  | |||||||||||||||||||||||     
T  24122079 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattgg 24122178  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  24122179 tcccctcggattagtcgattcttggatcggataccgagttt 24122219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 46607866 - 46608006
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccc-ccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| |||||| ||||||||||||||||||||||     
T  46607866 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaaaggcccccccgcaagtgggcggtgggattga 46607965  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||  | ||||||||||||| |||||||    
T  46607966 tcccctcggattagtcggtccttggatcggatatcgagttt 46608006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 24674449 - 24674581
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  24674449 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 24674548  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||| ||||||| ||||||||||||||||    
T  24674549 tcccctcgtattagtcgattcttggatcggata 24674581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 30677232 - 30677372
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||| ||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||||||  |||||||||||||||||||||||||     
T  30677232 tcaggtttgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaatgggacccccgcaagtgggcggtgggattgg 30677331  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| ||||||||  |||||||| |||||| |||||||    
T  30677332 tcccctcagattagtcggttcttggaccggatatcgagttt 30677372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15059543 - 15059403
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcc-ccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||   |||||||||||||||||| |||||     
T  15059543 tcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgagattgg 15059444  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||||||||||||| |||||||    
T  15059443 tcccctcgaattagtcgattcttggatcggataccgagttt 15059403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 9500496 - 9500356
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||| ||||||||||||| |||||     
T  9500496 tcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggagcccccacaagtgggcggtgagattgg 9500397  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    || | ||||||||||| |||||||||||||||| |||||||    
T  9500396 tctcttcggattagtcgattcttggatcggatatcgagttt 9500356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 17935825 - 17935965
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||| ||| |||| ||||||||||||  || | ||||||||| ||||| |  ||||||| ||  |||||||||||||||| ||||||||     
T  17935825 tcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagagtttgctctggctttaaacggggcccccgcaagtgggcgatgggattgg 17935924  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| |||||||||||| |||||||||||||||| |||||||    
T  17935925 tccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 27455007 - 27454873
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg---ccccccgcaagtgggcggtgggatt 95  Q
    ||||||||||||| ||||| ||| |||||||||| |  || | ||||||||||||||| |  ||||||| ||   ||||||||| |||||||||||||||    
T  27455007 tcaggttcgattcactctgatgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgggccccccccgcatgtgggcggtgggatt 27454908  T
Q  96 gttcccctcggattagtcaattcttggatcggata 130  Q
    | |||||||||||||||| ||||||||||||||||    
T  27454907 ggtcccctcggattagtcgattcttggatcggata 27454873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 36156029 - 36155889
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct---gtctttaaatggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||| |||||||||||   || || ||  || |||||||| ||||||||||||||||     
T  36156029 tcaggttcgattccctctggtgccaatttcggtgggccaagtccatgcagagcttgctttagttttaaacagggcccccgcaggtgggcggtgggattgg 36155930  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||  ||||||| |||||||||||||||| |||||||    
T  36155929 tcccttcaaattagtcgattcttggatcggataccgagttt 36155889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 48699889 - 48699955
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  48699889 cccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttt 48699955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 168257 - 168389
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || |||||||||||||||  ||| |||||||  || | ||||| ||||| |||||||||||     
T  168257 tcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagcttgttctgactttaaacgggactcccgctagtggccggtgggattgg 168356  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||| | ||||| || ||||||    
T  168357 tcccctcggattagttagttcttagaccggata 168389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 7197387 - 7197248
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatg-gccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||| ||| |||||||||||||||  |  ||||||| |||||| |  ||||||| | | |||| |||||||||||||| |||||     
T  7197387 tcaggttcgattccctctgatgccaatttcggtgggtaag-tcaatacagaccttgctctggctttaaacgaggcccctgcaagtgggcggtgagattgg 7197289  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||| ||||||||||| |||||||    
T  7197288 tcccctcggattagtcgattcatggatcggataccgagttt 7197248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 8254893 - 8254753
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||  ||||||||  ||||||||||||  || |||||||||| |||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  8254893 tcaggttcgattatctctggtgtcaatttcggtgggctaagttcatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattga 8254794  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| | ||||||| ||||||| |||||||| |||||||    
T  8254793 tccccttgaattagtcgattcttgaatcggataccgagttt 8254753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 32729601 - 32729740
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcc-ccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| |||||| |||||||||||| ||  | ||||||||||||||| |  ||||||||||   ||||||||||||||||||||||||     
T  32729601 tcaggttcgattccctatggtgccaatttcggtgggcaag-tccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattga 32729699  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| |||||||||  |  |||||||||||| |||||||    
T  32729700 tccccttggattagtcggtctttggatcggataccgagttt 32729740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 8077703 - 8077841
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| ||||||||||||  || | |||||||||||||  ||| |||||||  || |||||||||||||||||||||||||     
T  8077703 tcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattgg 8077802  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagtt 137  Q
    ||||||| ||||| || ||| |||||||||| | ||||||    
T  8077803 tcccctc-gattaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23734172 - 23734305
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||||||| ||| ||||||||||||  || | ||||||||| ||||| |  ||||||| ||  ||||||||||||||||||||  ||||    
T  23734172 tcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattg 23734271  T
Q  97 ttcccctcggattagtcaattcttggatcggata 130  Q
     ||||||| |||||||| ||||||| ||||||||    
T  23734272 gtcccctcagattagtcgattcttgaatcggata 23734305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23741364 - 23741497
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||||||| ||| ||||||||||||  || | ||||||||| ||||| |  ||||||| ||  ||||||||||||||||||||  ||||    
T  23741364 tcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattg 23741463  T
Q  97 ttcccctcggattagtcaattcttggatcggata 130  Q
     ||||||| |||||||| ||||||| ||||||||    
T  23741464 gtcccctcagattagtcgattcttgaatcggata 23741497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 1378958 - 1379090
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcccc 102  Q
    |||||||| |||||||||  ||||||||||||  || | |||||||| |||||| |  ||||||| || ||||||||||||| ||||| ||||| |||||    
T  1378958 gttcgatttcctctggtgtcaatttcggtgggctaagtccatacagaacttgctctggctttaaacgggcccccgcaagtggacggtgagattggtcccc 1379057  T
Q  103 tcggattagtcaattcttggatcggataacgag 135  Q
    || |||||||| |||||| ||||||||| ||||    
T  1379058 tcagattagtcgattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 7578465 - 7578605
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccc-cgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| |||||| ||||||||||||  || | |||||| |||||||| |  ||||||| ||  ||| |||||||||| ||||||||||     
T  7578465 tcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagcttgctctgactttaaacggggccctcgcaagtgggtggtgggattgg 7578564  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | |||||||||||||  ||| |||||||||||| |||||||    
T  7578565 ttccctcggattagttgatttttggatcggataccgagttt 7578605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 45859184 - 45859052
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||  ||||||| |  |||||||  || |||||||||||||| ||| ||||||     
T  45859184 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatcgcttgctcttgctttaaacagggcccccgcaagtgggtggtaggattgg 45859085  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||  ||| ||||||||||||    
T  45859084 tcccctcggattagttgattattggatcggata 45859052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 34778398 - 34778535
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||| ||||||||||||| | ||||| |||||||    | ||||||||| ||||| |  ||||||| ||  ||||||||||||| |||||||||||     
T  34778398 tcaggtttgattccctctggtaccaattttggtgggtt---tccatacagagtttgctttggctttaaacggggcccccgcaagtggacggtgggattgg 34778494  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  34778495 tccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 37351602 - 37351454
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt-----------ctttaaatggccccccgcaagtgggcggt 89  Q
    |||||||||||||| |||| ||| ||||||||||||  || | ||||||||||||||| |           ||||||| || ||||| ||||||||||||    
T  37351602 tcaggttcgattccttctgatgccaatttcggtgggctaagtccatacagagcttgctctggaagctctggctttaaacgggcccccacaagtgggcggt 37351503  T
Q  90 gggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| ||||||||||||||||  | ||||||||||||| |||||||    
T  37351502 gggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 21726785 - 21726917
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| |||||| ||||||| ||||| || | |||| |||||||| | |  ||||||| ||  ||||| ||||||||||||||| |||     
T  21726785 tcaggttcgattccctttggtgccaatttcgatgggttaagtccatatagagcttgttctagctttaaacgggtcccccacaagtgggcggtggggttga 21726884  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    ||||||| ||||| || ||||||||||||||||    
T  21726885 tcccctcagattaatcgattcttggatcggata 21726917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 26513226 - 26513149
Alignment:
Q  61 ctttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| || ||||| |||||||||||||||| || |||||||||||||||| |||||||||||| ||| |||||||    
T  26513226 ctttaaacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagttt 26513149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 7946904 - 7947011
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcccc 102  Q
    ||||||||||||||||||| ||||||||||||  || |  |||||||||||||| |  ||||||||||  ||||||||||||| |||| ||||| |||||    
T  7946904 gttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctcgctttaaatggggccccgcaagtgggtggtgagattggtcccc 7947003  T
Q  103 tcggatta 110  Q
    || |||||    
T  7947004 tcagatta 7947011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 22910001 - 22910067
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||  |||||||||||||||| || ||| ||||||||| |||||||    
T  22910001 cccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttt 22910067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 35138118 - 35138184
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| | ||||||||||||||  | ||||||||||||| |||||||    
T  35138118 cccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagttt 35138184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 27159205 - 27159281
Alignment:
Q  62 tttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| || ||||||||||||| ||||||||||| ||||||| |||||||| ||  |||||||||||| |||||||    
T  27159205 tttaaacgggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttt 27159281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 23041655 - 23041718
Alignment:
Q  75 ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||| | ||||||||| |||||||| ||||||| |||||||||||||||| |||||||    
T  23041655 ccgcaagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagttt 23041718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 2537820 - 2537870
Alignment:
Q  69 ggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattct 119  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  2537820 ggccccccgcaagtgggcggagggattggtcccctcggattagtcagttct 2537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 8779803 - 8779745
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||| ||||| ||||||||||||| |||||||||||||||| |||||| |||||||||    
T  8779803 cccccacaagtaggcggtgggattggtcccctcggattagtcgattcttagatcggata 8779745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 18646909 - 18647041
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccccc-gcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| ||||||||||||  || |  ||||| || ||||| |  ||||||| ||  |||| | |||||||||||| |||||     
T  18646909 tcaggttcgattctctctggtgccaatttcggtgggctaagtctatacaaagtttgctctggctttaaacggagcccctgtaagtgggcggtgagattga 18647008  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||| ||||||| ||||||| ||||||||    
T  18647009 tcccctcgaattagtcgattcttgaatcggata 18647041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 33905651 - 33905511
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||||||   ||||||||||||| || | ||||||||| |||  ||| |||||||  || || ||| |||||| |||||||||||     
T  33905651 tcaggttcgattccctctggtatcaatttcggtgggttaagtccatacagagtttgttctggctttaaacggggcctccgtaagtggacggtgggattga 33905552  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||  |||  || |||||| ||||||||| |||||||    
T  33905551 tcccctcaaatttatcgattctttgatcggataccgagttt 33905511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 1486549 - 1486616
Alignment:
Q  71 ccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||| ||||||||| | ||||||| ||||||||  | ||||||||||||| |||||||    
T  1486549 ccccccgcaagtggacggtgggatcggtcccctccgattagtcggtccttggatcggataccgagttt 1486616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23232406 - 23232304
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg------ctgtctttaaat-ggccccccgcaagtgggcggtggga 93  Q
    |||||||||||||||||||| || ||||||||||||  || | |||||||||||||      ||| |||||||| || |||||||||||||| |||||||    
T  23232406 tcaggttcgattccctctggcgccaatttcggtgggctaagtccatacagagcttgcaagctctggctttaaatgggacccccgcaagtgggtggtggga 23232307  T
Q  94 ttg 96  Q
    |||    
T  23232306 ttg 23232304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 40146027 - 40145890
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaa------gtgggcggtggg 92  Q
    |||||||||||| ||||| |||| |||||  |||||  || | ||||||||||||||| |  |||||||||| ||||| |||      ||||| |||| |    
T  40146027 tcaggttcgatttcctctagtgccaatttatgtgggctaagtccatacagagcttgctctgactttaaatgggcccccacaaccacaagtgggtggtgag 40145928  T
Q  93 attgttcccctcggattagtcaattcttggatcggata 130  Q
     ||| |||||||||||||||| ||||||||||||||||    
T  40145927 tttggtcccctcggattagtcgattcttggatcggata 40145890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 45331739 - 45331622
Alignment:
Q  25 aatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattgttcccctcggattagtcaattctt 120  Q
    ||||||||||||  || | ||||||||||||||| |  ||||||| ||  | |||||||||||| ||||||||||  ||||||| ||||| || ||||||    
T  45331739 aatttcggtgggctaagtccatacagagcttgctttggctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatcgattctt 45331640  T
Q  121 ggatcggataacgagttt 138  Q
    | |||||||| |||||||    
T  45331639 gaatcggataccgagttt 45331622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 50202680 - 50202741
Alignment:
Q  76 cgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||| ||||||||||||| || |||||| ||||||||| |||||||    
T  50202680 cgcaagtgggcggtggaattggtcccctcggattaatcgattctt-gatcggatatcgagttt 50202741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 5315478 - 5315527
Alignment:
Q  89 tgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||||||| |||| |||||||||||||||| |||||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagttt 5315527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 14603947 - 14603992
Alignment:
Q  93 attgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagttt 14603992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 16899559 - 16899594
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtggg 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  16899559 tcaggttcgattccctctggtgccaatttcggtggg 16899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 12877003 - 12876965
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggatta 110  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  12877003 cccccgcaagtggacggtgggattggtcccctcggatta 12876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 25496625 - 25496503
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgtctttaaatggccccccgcaagtgggcggtgggattgttcccctc 104  Q
    |||||||||||||| ||||  ||||||||| | ||  ||||||  |||||| ||| ||| ||||||  | |||||||||| ||||||||||| ||||||     
T  25496625 gttcgattccctctagtgcctatttcggtgagcaag-ttcatattgagcttactggcttaaaatggggctccgcaagtggacggtgggattgatcccct- 25496528  T
Q  105 ggattagtcaattcttggatcggata 130  Q
     ||||||||  | |||||||||||||    
T  25496527 -gattagtctgtacttggatcggata 25496503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 47091751 - 47091809
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||| |||||||||| |||  |||  ||||| |||||||||||||||||    
T  47091751 cccccgcaagtggggggtgggattggtccattcgatttagtaaattcttggatcggata 47091809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 40802166 - 40802070
Alignment:
Q  44 catacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||| |  ||||||| ||  ||||||||||||| |||| ||||| ||| || | ||||||| ||||||| |||| ||| |||||||    
T  40802166 catacagagcttgctctgactttaaacgggtccccgcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaataccgagttt 40802070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 52135261 - 52135314
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||| ||||||||||| |||||||  |||||||  |||||||||||||||    
T  52135261 gcaagtggacggtgggattggtcccctcatattagtcggttcttggatcggata 52135314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 43770031 - 43769975
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggat 129  Q
    |||| ||| ||||||||||||||| |||| ||| ||||||| ||||| |||||||||    
T  43770031 ccccacaaatgggcggtgggattggtcccttcgaattagtcgattctaggatcggat 43769975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 5223 - 5083
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  ||||||||| |||||||||||||||     
T  5223 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattgg 5124  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  5123 tcccctcggattagtcgattcttggatcggataccgagttt 5083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 161865 - 162005
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  |||| |||||  |||||||||||||||||||||||||     
T  161865 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttttaatggggcccccgcaagtgggcggtgggattgg 161964  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  161965 tcccctcggattagtcgattcttggatcagataccgagttt 162005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 4e-34; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 5609343 - 5609203
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||||||  ||||||||||||| |||||||||||     
T  5609343 tcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattga 5609244  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  5609243 tcccctcggattagtcgattcttggatcggataccgagttt 5609203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20566406 - 20566546
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| |||||||||||| ||| | ||||||||||||||| |  ||||||| ||  |||||||||||||||| ||||||||     
T  20566406 tcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcgctgggattgg 20566505  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| |||||||| |||||||||||||||| |||||||    
T  20566506 tcccctcagattagtcgattcttggatcggatatcgagttt 20566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 32986253 - 32986393
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||| |||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||||||  |||||||||||||||||||||||||     
T  32986253 tcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattgg 32986352  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||| ||||| |||||||||||||||| |||||||    
T  32986353 tcccctcggaatagtcgattcttggatcggataccgagttt 32986393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 33696420 - 33696280
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||| |||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||||||  ||||||||||||||||||| |||||     
T  33696420 tcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgagattgg 33696321  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| ||||||||||||||||||||||||||||| |||||||    
T  33696320 tcctctcggattagtcaattcttggatcggatatcgagttt 33696280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 34844899 - 34844759
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  34844899 tcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 34844800  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  34844799 tcccctcggattagtcgattcttggatcggataccgagttt 34844759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 40058993 - 40058853
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  40058993 tcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 40058894  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  40058893 tcccctcggattagtcgattcttggatcggataccgagttt 40058853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 52983675 - 52983815
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| |||||| |||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  52983675 tcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 52983774  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  52983775 tcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 27528936 - 27528796
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||| | ||  ||||||||||||||||||| |||||     
T  27528936 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttatacggggcccccgcaagtgggcggtgagattgg 27528837  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  27528836 tcccctcggattagtcgattcttggatcggataccgagttt 27528796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 19660673 - 19660533
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||| ||||| ||||| ||| ||||||||||||  || | ||||||||||||||| |  |||||||  || |||||||||||||||||||||||||     
T  19660673 tcaggtttgattctctctgatgcaaatttcggtgggataagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattga 19660574  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  19660573 tcccctcggattagtcgattcttggatcggataccgagttt 19660533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 34723855 - 34723995
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||| |||||||| |  ||||||| ||  |||||||||||||| ||||||||||     
T  34723855 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattgg 34723954  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| |||||||||||| |||||||||||||||| |||||||    
T  34723955 tcctctcggattagtcgattcttggatcggataccgagttt 34723995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 46714448 - 46714589
Alignment:
Q  1 tcaggttcgatt-ccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattg 96  Q
    |||||||||||| |||| |||||| ||||||||||||  || | ||||||||||||||  |  ||||||| ||  |||||||||||||||||||||||||    
T  46714448 tcaggttcgatttccctttggtgccaatttcggtgggctaagtccatacagagcttgcccttgctttaaacggggcccccgcaagtgggcggtgggattg 46714547  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     |||||||||||||||||||||||| |||||||| |||||||    
T  46714548 gtcccctcggattagtcaattcttgaatcggataccgagttt 46714589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 44343574 - 44343710
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccc-cccgcaagtgggcggtgggattgttccc 101  Q
    ||||||||||||||||||||||||| ||||||  || | ||||||||||||||| |  ||||||| ||  | ||||||||||||||||||||||| ||||    
T  44343574 gttcgattccctctggtgctaattttggtgggctaagtccatacagagcttgctctgactttaaacggggctcccgcaagtgggcggtgggattggtccc 44343673  T
Q  102 ctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||||||| ||||||| |||||||| |||||||    
T  44343674 ctcgaattagtcgattcttgaatcggataccgagttt 44343710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 45787845 - 45787705
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||| ||| |||||| |||||  || | ||||||||||||||| |  |||||||  || ||||||||||||| |||||||||||     
T  45787845 tcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtggacggtgggattgg 45787746  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||||||||||||| |||||||    
T  45787745 tcccctcgaattagtcgattcttggatcggataccgagttt 45787705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 18875657 - 18875518
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||| ||  ||||||||||||  || | ||||||||||||||| |  ||||||| || ||||| ||||||||  ||||||||| |    
T  18875657 tcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccacaagtgggtagtgggattgat 18875558  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||| ||||||| |||| |||||||    
T  18875557 cccctcggattagtcaatttttggatcagataccgagttt 18875518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 32990491 - 32990619
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| | |||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  32990491 tcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 32990590  T
Q  98 tcccctcggattagtcaattcttggatcg 126  Q
    |||||||||| ||||| ||||||||||||    
T  32990591 tcccctcggactagtcgattcttggatcg 32990619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 20078125 - 20077986
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||| ||||||| ||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||| |||||||||||||||||      
T  20078125 tcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgtaagtgggcggtgggattag 20078026  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagtt 137  Q
    | |||||||||||||| |||||||||||||||| ||||||    
T  20078025 ttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 25852270 - 25852411
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaat--ggccccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  |||||||   || ||| |||||||||||  ||||||||    
T  25852270 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaacgggaccctcgcaagtgggcaatgggattg 25852369  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     ||||||||||||||||  |||||||| |||||| |||||||    
T  25852370 gtcccctcggattagtcggttcttggaccggataccgagttt 25852411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 9517782 - 9517650
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||||||| |||||| |||||  || | ||||||||||||||| |  ||||||| ||  |||||||| ||||| |||| |||||     
T  9517782 tcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaggtgggtggtgagattgg 9517683  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| ||||||||||||||||    
T  9517682 tcccctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 36131651 - 36131511
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| |||||| |||||||||||   || | ||||||||||||||| |  ||||||| ||  |||||| ||||||||||||||||||     
T  36131651 tcaggttcgattccctatggtgccaatttcggtggcctaagtccatacagagcttgctatgactttaaacgggacccccgtaagtgggcggtgggattgg 36131552  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| ||| || |||| |||| |||||||    
T  36131551 tcccctcggattagtcgattattagatcagataccgagttt 36131511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 54127483 - 54127351
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||| ||||||||| |||| ||||||||||||  || |  |||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  54127483 tcaggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 54127384  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||||  |||||||| ||||||    
T  54127383 tcccctcggattagtcggttcttggaccggata 54127351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 7392104 - 7391966
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||||||| |||||| ||||||||||| |||  | ||||||||| ||||| |  ||||||||||  ||||   |||||||||||||||||||    
T  7392104 tcaggttcgattccctatggtgccaatttcggtggttaag-tccatacagagtttgctctggctttaaatgggacccccatagtgggcggtgggattgtt 7392006  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||  ||||| ||| ||||| |||||||    
T  7392005 cccctcggattagtcggttcttcgattggataccgagttt 7391966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 27574398 - 27574506
Alignment:
Q  25 aatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttg 121  Q
    ||||||||| ||  |||||||||||||||||||| |  ||||||| ||  ||||||||||||||||||| | ||| ||||||||||||| ||||||||||    
T  27574398 aatttcggtaggctaaattcatacagagcttgctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttg 27574497  T
Q  122 gatcggata 130  Q
    |||||||||    
T  27574498 gatcggata 27574506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 49287914 - 49288045
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||| ||||||||| ||||||||||||  || | |||||| |  ||||| |  ||||||| || | |||||||||||||| || ||||| |    
T  49287914 tcaggttcgattctctctggtgccaatttcggtgggctaagtccatacaaaatttgctatggctttaaacgggctcccgcaagtgggcgctgagattggt 49288013  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||| ||||||||||| ||||    
T  49288014 cccctcggattagtcgattcttggatcagata 49288045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 23639758 - 23639820
Alignment:
Q  76 cgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  23639758 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 23639820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 23645416 - 23645478
Alignment:
Q  76 cgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  23645416 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 23645478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 52494623 - 52494684
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||||| |||||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttt 52494684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 51535669 - 51535809
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtggg----taaaattcatacagagcttgc-----tgtctttaaatgg--ccccccgcaagtgggcggt 89  Q
    ||||||||||||||||||||||| ||||| ||||||    | || | ||||||||||||||     || ||||||| ||  ||||| |||||||||||||    
T  51535669 tcaggttcgattccctctggtgccaattttggtgggctaattaagtccatacagagcttgcagctctggctttaaacggggcccccagcaagtgggcggt 51535768  T
Q  90 gggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||| |||||||| ||||||| |||||| |||||||||    
T  51535769 gggattggtcccctcgaattagtcgattcttagatcggata 51535809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 35229224 - 35229356
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    |||||||||||||| |||  ||| ||||||||||||  || | |||||| |||||||| |  ||||||| ||  |||||| |||||| ||||||||||||    
T  35229224 tcaggttcgattccttcta-tgccaatttcggtgggctaagtccatacatagcttgctctgactttaaacgggtccccccacaagtgagcggtgggattg 35229322  T
Q  97 ttcccctcggattagtcaattcttggatcggata 130  Q
     |||||||| ||||||| ||||||||||||||||    
T  35229323 gtcccctcgaattagtcgattcttggatcggata 35229356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 4064990 - 4065048
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||    
T  4064990 cccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggata 4065048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 9978576 - 9978510
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| |||| ||||||||||  |||||| ||||||||| |||||||    
T  9978576 cccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagttt 9978510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 34835589 - 34835713
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagct-tg-ctgtctttaaat--ggccccccgcaagtgggcggtgggattgttcc 100  Q
    ||||||||||||||||||  ||||||||||||  || | ||||| ||||| || ||| ||||||||  |||||||||||||||||| ||| ||||| |||    
T  34835589 gttcgattccctctggtgtcaatttcggtgggctaagtccatacggagctatgtctggctttaaatagggccccccgcaagtgggc-gtgagattggtcc 34835687  T
Q  101 cctcggattagtcaattcttggatcg 126  Q
    ||||||||||||| |||||| |||||    
T  34835688 cctcggattagtcgattcttagatcg 34835713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 32942428 - 32942552
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccg-caagtgggcggtgggattgttc 99  Q
    ||||||||||| ||||| ||| ||||||||||||  || | |||||||||||| || |  ||||||| ||||||||  ||||||| ||||||||||| ||    
T  32942428 aggttcgattctctctgatgccaatttcggtgggctaagtccatacagagcttactctggctttaaacggcccccccacaagtggacggtgggattggtc 32942527  T
Q  100 ccctcggattagtcaattcttggat 124  Q
    ||||||||| | || ||||||||||    
T  32942528 ccctcggataaatcgattcttggat 32942552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 55961881 - 55961767
Alignment:
Q  14 cctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcccctcggattag 111  Q
    |||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||| ||||||||||||||||||| | || ||||||||     
T  55961881 cctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggccccacaagtgggcggtgggattggttccttcggattaa 55961782  T
Q  112 tcaattcttggatcg 126  Q
    || ||||||| ||||    
T  55961781 tcgattcttgaatcg 55961767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 30879304 - 30879175
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatggccccccgcaagtgggcggtgggattgttcc 100  Q
    ||||| ||||||||||||||| ||||||| ||||| |||| |||||| || |||  ||| ||||||| ||   || |||||||| ||||||||||| | |    
T  30879304 aggtttgattccctctggtgccaatttcgatgggttaaatccatacaaagtttgctctggctttaaagggggtcctgcaagtggacggtgggattggttc 30879205  T
Q  101 cctcggattagtcaattcttggatcggata 130  Q
    |||| ||||| || ||||||||||| ||||    
T  30879204 cctcagattaatcgattcttggatcagata 30879175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 35674881 - 35674750
Alignment:
Q  2 caggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||| || ||||||||||||  || | |||||||||||||  ||| |||||||  || |||||||||||||||||| ||||        
T  35674881 caggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctgcctttaaacggggcccccgcaagtgggcggttggat---- 35674786  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
       |||||||||||| |||||| ||||||||| |||||||    
T  35674785 ---ctcggattagtcgattctt-gatcggataccgagttt 35674750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 43719154 - 43719096
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||| |||||||||||||||||| ||  |||||||||||| ||||||||||||||||    
T  43719154 cccccgaaagtgggcggtgggattggtcatctcggattagtcgattcttggatcggata 43719096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12500199 - 12500060
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||| ||||||||||||||| ||||||  ||||  || | |||||| ||||||  ||| |||||||  || ||||||||||||||||||   ||||     
T  12500199 tcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattga 12500100  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | | |||||||||||||||||||||| |||||| |||||||    
T  12500099 t-ctctcggattagtcaattcttggaccggataccgagttt 12500060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 55158409 - 55158344
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| |||| |||||||||| |||||||||||||||| ||| |||||||||| | |||||||    
T  55158409 ccccgcaaatgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagttt 55158344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13873436 - 13873321
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||| ||  || ||||||||||| ||||| |  ||| |||  || |||||||||||||| ||||| ||||     
T  13873436 tcaggttcgattccctctggtgccaatttcggtaggctaagttcatacagagtttgctctagcttcaaacagggcccccgcaagtgggtggtggaattga 13873337  T
Q  98 tcccctcggattagtc 113  Q
    ||| || |||||||||    
T  13873336 tcctctgggattagtc 13873321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 23131497 - 23131437
Alignment:
Q  78 caagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||| |||||| |||||||| ||||||| |||||| ||||||||| |||||||    
T  23131497 caagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttt 23131437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 4912056 - 4912122
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||| |||| ||||| ||||| || ||||||| ||||||||||| |||| |||||||    
T  4912056 cccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagttt 4912122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 21387551 - 21387496
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||||||||  || |||||||||||||||| ||| ||||||||||||    
T  21387551 ccccgcaagtgggcggtggg--tggtcccctcggattagtcgattattggatcggata 21387496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 25969639 - 25969512
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcc 100  Q
    ||||| ||||||| ||||||| |||||||||||  ||  | |||||||| |||||| |  ||||||| || |||||| ||||| |||||||||||| | |    
T  25969639 aggttggattccccctggtgccaatttcggtggccaag-tccatacagaacttgctctggctttaaacgggcccccgtaagtgagcggtgggattggt-c 25969542  T
Q  101 cctcggattagtcaattcttggatcggata 130  Q
    ||||| ||||||| ||||||| ||||||||    
T  25969541 cctcgaattagtcgattcttgaatcggata 25969512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 33289180 - 33289242
Alignment:
Q  68 tggccccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||  ||||||| ||||| ||||  |||||||||||||||| ||||||||||||||||    
T  33289180 tggccccctacaagtggacggtgagattagtcccctcggattagtcgattcttggatcggata 33289242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22625211 - 22625154
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct 58  Q
    |||||||||||||||||||| || ||||||||||||  || | |||||||||||||||    
T  22625211 tcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgct 22625154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 51595153 - 51595218
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||| |||||| |||| || | |||||||| || |||||||||||||||| |||||||    
T  51595153 ccccgcaagtggacggtggaattgatctcttcggattaatcgattcttggatcggataccgagttt 51595218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3392806 - 3392759
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcataca 49  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  3392806 tcaggttcgatttcctctggtgttaatttcggtggg-aaaattcataca 3392759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 17637912 - 17637853
Alignment:
Q  78 caagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||  |||| |||||||||||||||| |||||| ||||||||| |||||||    
T  17637912 caagtgggcggtgatattggtcccctcggattagtcgattctt-gatcggataccgagttt 17637853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 20527166 - 20527035
Alignment:
Q  9 gattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgtc--tttaaatggccccccgcaagtgggcggtgggattgttcccctcgg 106  Q
    |||||||||||| || ||||||||||||  || | |||| |||||||| | ||  ||||||  |  ||||| ||||||||||| |||||| || ||||||    
T  20527166 gattccctctggcgccaatttcggtgggctaagtccatatagagcttgatttcggtttaaacagggccccgtaagtgggcggtaggattggtctcctcgg 20527067  T
Q  107 attagtcaattcttggatcggataacgagttt 138  Q
    ||||||| ||| |||||||  ||| |||||||    
T  20527066 attagtcgatttttggatcaaataccgagttt 20527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 37302623 - 37302675
Alignment:
Q  78 caagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||| |||||||| |||| ||||||||||| ||||||| ||||||||    
T  37302623 caagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggata 37302675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 7093508 - 7093567
Alignment:
Q  79 aagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||||| |||| ||| |||||||  | ||||||||||||| |||||||    
T  7093508 aagtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagttt 7093567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 9646280 - 9646217
Alignment:
Q  75 ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||| ||||||||| ||||||||||||||||  |  ||||||||| || |||||||    
T  9646280 ccgcaagtgggcagtgggattgatcccctcggattagtcggtcattggatcgggtaccgagttt 9646217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 13017843 - 13017897
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcg 126  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||  | |||||||||    
T  13017843 cccccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatcg 13017897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 13716513 - 13716459
Alignment:
Q  76 cgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||||||||| ||| || ||||| |||| |||||| ||||||||    
T  13716513 cgcaagtgggcggtgggattggtcctcttggattggtcagttcttgaatcggata 13716459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 22488095 - 22488037
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||| ||||||||||||||| |||||||  |||||||  | |||||||||||||    
T  22488095 cccccgcaaatgggcggtgggattgatcccctcaaattagtcggtccttggatcggata 22488037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 33992684 - 33992773
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggt 89  Q
    ||||||||||| ||||||||| ||||||||||||  || | |||||| ||||||  ||| |||||||  || ||||||||||||||||||    
T  33992684 aggttcgattctctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcggt 33992773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 45302954 - 45303032
Alignment:
Q  61 ctttaaatggccccccgcaagtgggcggtgggatt-gttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||  || ||||||||| ||||| |||| | ||  |||||||||||||||||||| |||||||| |||||||    
T  45302954 ctttaaatggggcctcgcaagtggacggtgagatttggtcatctcggattagtcaattcttgaatcggataccgagttt 45303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 12824535 - 12824588
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||| ||||||||||| || | ||| ||||||| ||||||||||||||||    
T  12824535 gcaagtggacggtgggattggtctcatcgaattagtcgattcttggatcggata 12824588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 13550339 - 13550392
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcg 126  Q
    |||| |||||||||||| |||| | ||||||||||||| || ||||||||||||    
T  13550339 ccccacaagtgggcggtaggataggtcccctcggattaatcgattcttggatcg 13550392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2351069 - 2351101
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  2351069 tcaggttcgattccctctggtgccaatttcggt 2351101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 41621643 - 41621583
Alignment:
Q  78 caagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |  ||||||| ||||||||  | |||||||||||||||||||||    
T  41621643 caagtgggtggtgggactaatcccctcagattagtcggtccttggatcggataacgagttt 41621583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43719206 - 43719154
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagc 53  Q
    ||||||||||||| |||| |||||||||||||||||  || | ||||||||||    
T  43719206 tcaggttcgattctctctagtgctaatttcggtgggctaagtccatacagagc 43719154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 4e-34; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 44946194 - 44946054
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg-ccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| |||||| ||||||||||||  || | |||||||| |||||| |  ||||||| || ||||||||||||||||||||||||||     
T  44946194 tcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacgggccccccgcaagtgggcggtgggattgg 44946095  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  44946094 tcccctcggattagtcgattcttggatcggataccgagttt 44946054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 11941351 - 11941211
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||| ||||||| |||||| ||||| ||||||| || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  11941351 tcaggttcaattccctatggtgccaattttggtgggttaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattgg 11941252  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  11941251 tcccctcggattagtcgattcttggatcggataccgagttt 11941211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 15038015 - 15038155
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||| |||||| ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  15038015 tcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaagtgggcggtgggattgg 15038114  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| |||||||| |||||||||||||||| |||||||    
T  15038115 tcccctcagattagtcgattcttggatcggataccgagttt 15038155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 2140624 - 2140487
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||||||||||  |||||||||||    | | ||||||||||||||| |  ||||||||||  ||||||||||||||||||||||||||    
T  2140624 tcaggttcgattccctctggtgtcaatttcggtgg----agtccatacagagcttgctctggctttaaatgggcccccccgcaagtgggcggtgggattg 2140529  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     |||||||||||||||| ||| |||||||||||| |||||||    
T  2140528 gtcccctcggattagtcgattattggatcggataccgagttt 2140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 33827714 - 33827574
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccccc-gcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||| ||||  || | ||||||||||||||| |  ||||||| ||  |||| ||||||||||||||||||||     
T  33827714 tcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagagcttgctctggctttaaacgggacccctgcaagtgggcggtgggattgg 33827615  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  33827614 tccccttggattagtcgattcttggatcggataccgagttt 33827574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 35171856 - 35171996
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||  | ||||||||||||  || | ||||||||||||||| |  ||||||| ||  |||||||||||||||||||||||||     
T  35171856 tcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 35171955  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| ||||||| |||||||| |||||||    
T  35171956 tcccctcggattagtcgattcttgaatcggataccgagttt 35171996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 17324822 - 17324960
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||||||||  ||| |||||||||| ||||| ||||||||||||||||||  |    
T  17324822 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgggcccccacaagtgggcggtgggattagt 17324921  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  17324922 cccctcaaattagtcgattctt-gatcggatatcgagttt 17324960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19054081 - 19054222
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||| |||||| ||||||| ||| |||||||||  || | ||||||||||||||| |  ||||||||||  ||||||||||||||||||||||||||    
T  19054081 tcaggtttgattccttctggtgttaacttcggtgggctaagtccatacagagcttgctttggctttaaatggaaccccccgcaagtgggcggtgggattg 19054180  T
Q  97 ttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     ||| |||||||||||| ||||||||||| |||| |||||||    
T  19054181 gtccgctcggattagtcgattcttggatcagataccgagttt 19054222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 30466971 - 30466831
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||| ||||| ||| ||||||||||||  || | ||||||||||||||| |  |||||||  || ||||||||||||||| |||||||||     
T  30466971 tcaggttcgattctctctgctgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaccgggcccccgcaagtgggcagtgggattgg 30466872  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  30466871 tcccttcggattagtcgattcttggatcggataccgagttt 30466831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24196060 - 24196198
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||| |||||| |  ||||||| || |||| |||||||||||||||||||| |    
T  24196060 tcaggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaacttgctctggctttaaacgggcccc-gcaagtgggcggtgggattggt 24196158  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||| ||| || ||| ||||| |||||||    
T  24196159 cccctcggattagtcgattttttgattggataccgagttt 24196198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 25293222 - 25293355
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgtctttaaatgg--ccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||||||||||  || ||||||    |||  ||| ||||||| ||  ||||||||||||||||| |||||||| |    
T  25293222 tcaggttcgattccctctggtgccaatttcggtgggctaagttcata----gct--ctggctttaaacggggccccccgcaagtgggcgatgggattggt 25293315  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  25293316 cccctcggattagtcgattcttggatcggataccgagttt 25293355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 43374466 - 43374331
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||||||||||  || || ||||| |||||||| |  ||||||     |||||||||||| |||||||||||| |    
T  43374466 tcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagcttgctctggctttaag----cccccgcaagtgagcggtgggattggt 43374371  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| ||||||||||| |||||||||||||||| |||||||    
T  43374370 cccttcggattagtcgattcttggatcggataccgagttt 43374331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 34516536 - 34516423
Alignment:
Q  19 ggtgctaatttcggtgggtaaaattcatacagagcttgctgtc--tttaaatggccccccgcaagtgggcggtgggattgttcccctcggattagtcaat 116  Q
    |||| |||||||||||||  || | ||||||||||||||| ||  |||||| || |||| |||||||||||||||||||| |||||||||||||||| ||    
T  34516536 ggtggtaatttcggtgggctaagtccatacagagcttgctctcgctttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgat 34516437  T
Q  117 tcttggatcggata 130  Q
    ||||||||||||||    
T  34516436 tcttggatcggata 34516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 36242453 - 36242321
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcc-ccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||  ||||||||||||  || | ||  ||||||||||| |  ||||||| ||   ||||||||||||||||||||||||     
T  36242453 tcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattgg 36242354  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||| || ||||||||||||||||    
T  36242353 tcccctcggattaatcgattcttggatcggata 36242321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4567578 - 4567438
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||| |||||||||| ||||||||||||  |||| |||||||||||||  ||| |||||||  || ||||| ||||||||||||||||||||    
T  4567578 tcaggttcgatttcctctggtgccaatttcggtgggctaaatccatacagagcttgttctggctttaaacggggcccccacaagtgggcggtgggattgt 4567479  T
Q  98 --------tcccctcggattagtcaattcttggatcggata 130  Q
            ||| |||||||||||||||||||||||||||||    
T  4567478 gggattggtcctctcggattagtcaattcttggatcggata 4567438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10582131 - 10582018
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||| ||||||||||||  || | ||||||||||||||| |  ||||||| || ||| ||||||||||| ||||||||| |    
T  10582131 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctagctttaaacgggccctcgcaagtgggc-gtgggattggt 10582033  T
Q  99 cccctcggattagtc 113  Q
    ||||||| |||||||    
T  10582032 cccctcgaattagtc 10582018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 36390709 - 36390570
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaat-ggccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||| |||||||||| |||||||||||   || | |||||| ||||||  ||| |||||||| || |||||||||||||||||||||||||     
T  36390709 tcaggttcgatttcctctggtgccaatttcggtggactaagtccatacaaagcttgctctgactttaaatgggacccccgcaagtgggcggtgggattgg 36390610  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | ||||||||| |||| || |||| |||||||| |||||||    
T  36390609 t-ccctcggatcagtcgatacttgaatcggataccgagttt 36390570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 44976295 - 44976172
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatgg--ccccccgcaagtgggcggtgggattg 96  Q
    ||||||||||||||||||||||| ||||| ||||||  || | ||||||||| ||||| |  ||||||| ||  | ||||||||||||||||||||||||    
T  44976295 tcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagtttgctctggctttaaacggggctccccgcaagtgggcggtgggattg 44976196  T
Q  97 ttcccctcggattagtcaattctt 120  Q
     |||| ||||||||||| ||||||    
T  44976195 atcccttcggattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 27269409 - 27269345
Alignment:
Q  74 cccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||||    
T  27269409 cccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagttt 27269345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 28668946 - 28669069
Alignment:
Q  18 tggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgttcccctcggattagtca 114  Q
    |||||| |||||||||||   || | ||||||||||||||| |  ||||||| ||  ||||| ||||||||||||||||||| ||||||||||||||||     
T  28668946 tggtgccaatttcggtggactaagtccatacagagcttgctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcg 28669045  T
Q  115 attcttggatcggataacgagttt 138  Q
    ||| |||||||||||| |||||||    
T  28669046 atttttggatcggataccgagttt 28669069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 41314048 - 41314179
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    ||||||||||||||||||||||  ||||||||||||  || |  |||||||||||||| |  ||||||| ||   ||||||||||| ||||||||||| |    
T  41314048 tcaggttcgattccctctggtgtcaatttcggtgggctaagtctatacagagcttgctctgactttaaacgggatcccgcaagtggacggtgggattggt 41314147  T
Q  99 cccctcggattagtcaattcttggatcggata 130  Q
    |||||| ||||| || |||||| |||||||||    
T  41314148 cccctcagattaatcgattcttcgatcggata 41314179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 8192492 - 8192353
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg---ctgtctttaaatggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||| |||||||| ||  | |||| |||||||    ||| |||  || |||||| |||||||||||||||||||||     
T  8192492 tcaggttcgattccctctggtgccaatgtcggtgggcaag-tccatatagagctttgctctggcttagaacggcccctcgcaagtgggcggtgggattgg 8192394  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
     |||||||||||||||  | ||||||||||||| |||||||    
T  8192393 gcccctcggattagtcggtccttggatcggataccgagttt 8192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 18692090 - 18692156
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||| ||||||||||||||||||| |||||||| ||||||| |||||||||||||||| |||||||    
T  18692090 cccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttt 18692156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 18976521 - 18976464
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggata 18976464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 13266550 - 13266685
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgttcccc 102  Q
    ||||||||| ||||||||| |||| ||||||   || | ||||||||||||||| |  ||||||| ||  |||||||||||||   |||||||| |||||    
T  13266550 gttcgattcactctggtgccaattccggtggactaagtccatacagagcttgctctggctttaaacggggccccgcaagtgggtaatgggattggtcccc 13266649  T
Q  103 tcggattagtcaattcttggatcggataacgagttt 138  Q
    ||  ||||||| |||||||||||||||| |||||||    
T  13266650 tcaaattagtcgattcttggatcggatatcgagttt 13266685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 14486955 - 14487021
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||| |||||||||||||||||||| ||||||||||||||||  | ||||||||||||| |||||||    
T  14486955 cccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 14487021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 44929913 - 44929847
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| ||||||||||| |||||| | ||||||| |||||||||||||||| |||||||    
T  44929913 cccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagttt 44929847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 5394073 - 5394205
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccc-ccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||  ||||||| ||||  || | ||||||||| ||||| |  ||||||||||  || ||||||||||||||||||||||     
T  5394073 tcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacagagtttgctctgactttaaatggggccgccgcaagtgggcggtgggattgg 5394172  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||  |||||||||||  | ||| |||||||||    
T  5394173 tccgttcggattagtcggtccttagatcggata 5394205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 8258953 - 8259085
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||||  || ||||| ||||||| || | |||||||| ||||  ||| ||||||  ||  ||||||||||| ||||||||||||      
T  8258953 tcaggttcgattccctctgacgccaattttggtgggttaagtccatacagatcttgttctggctttaatcggggcccccgcaagtaggcggtgggattag 8259052  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    | || ||||||||||| ||||||||||||||||    
T  8259053 ttccttcggattagtcgattcttggatcggata 8259085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 41329899 - 41330038
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||| |||||||||||||||||| ||||| || |||  || | |||| |||||||||| |  ||||||||||  ||||| ||||||||||||| |||||     
T  41329899 tcagattcgattccctctggtgccaattttggcgggctaagtccata-agagcttgctctggctttaaatggggcccccacaagtgggcggtgagattgg 41329997  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| ||||||||  |||||||| |||||| |||||||    
T  41329998 tcccctcagattagtcggttcttggaccggataccgagttt 41330038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 39957891 - 39957954
Alignment:
Q  75 ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| |||||||| | |||||||||||||| |||||||||| ||||| |||||||    
T  39957891 ccgcaagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttt 39957954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 23787149 - 23787056
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaat-ggccccccgcaagtgggcggtgg 91  Q
    ||||||| ||||||||||||||| ||||||||||||  |||| ||||||||| |||  ||| |||||||| || || |||||||||||||||||    
T  23787149 tcaggtttgattccctctggtgccaatttcggtgggctaaatccatacagagtttgctctgactttaaatgggacctccgcaagtgggcggtgg 23787056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 31778161 - 31778227
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||| ||||| ||||| ||| ||| ||||||||| ||||||||||||||| |||||||    
T  31778161 cccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagttt 31778227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 3943796 - 3943928
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccc-cccgcaagtgggcggtgggattgt 97  Q
    |||| |||||||  ||||||||| ||||||||| ||  || | ||||||||||||||| |  ||||||| ||  | |||||||||||| ||||||||||     
T  3943796 tcagattcgattttctctggtgccaatttcggttggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggtggtgggattgg 3943895  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||| |||||||||  || ||||||||||||    
T  3943896 tccccttggattagtcggttattggatcggata 3943928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 44610139 - 44610235
Alignment:
Q  45 atacagagcttgctgt--ctttaaatggcccccc-gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||| |  ||||||||||  |||| |||||||||||||||||||| |||| |||||||||||  |||||||| || ||| |||||||    
T  44610139 atacagagcttgctctagctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagttt 44610235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 4852660 - 4852716
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggat 129  Q
    |||||||||||| |||||| |||| ||||||||||||| || |||||||||||||||    
T  4852660 ccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggat 4852716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 19174819 - 19174950
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagctt---gctgtctttaaatggccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||| |||||||| ||||||||||||| |  | ||||||||||||    ||| |||  || ||  ||||| || |||||||||||||||     
T  19174819 tcaggttcgattccttctggtgccaatttcggtgggt-aggtccatacagagctttgctctggcttagaacggagccccgtaaatgggcggtgggattga 19174917  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||| ||  | |||||||||||||    
T  19174918 tcccctcggattaatcggtccttggatcggata 19174950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 29361679 - 29361744
Alignment:
Q  73 ccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||| ||||||||| || |||||||||| |  |||| ||||||||||| |||||||    
T  29361679 ccccgcaagtgggcagtgggattgatctcctcggattaattgattcctggatcggatatcgagttt 29361744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 6714360 - 6714296
Alignment:
Q  74 cccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||| ||||| ||||| |||||||  ||||||| |||||||||| ||||| |||||||    
T  6714360 cccgcaagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagttt 6714296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 27290730 - 27290770
Alignment:
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  27290730 tcccctcggattagtcgattcttggatcggataccgagttt 27290770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 32845147 - 32845182
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtggg 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  32845147 tcaggttcgattccctctggtgccaatttcggtggg 32845182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 714192 - 714126
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||| ||||||||||| ||  ||||||| |||||||| |||||| ||| ||||| |||||||    
T  714192 cccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattcttagattggataccgagttt 714126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 9401028 - 9400970
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||||||||||||| ||||||||| |  |||  |||||||| ||||||||||||||||    
T  9401028 cccccgcaagtgggcagtgggattggtttccttagattagtcgattcttggatcggata 9400970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27290644 - 27290729
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtg 83  Q
    ||||||||||||||||  ||||| ||||||||||||  || | |||||||||||||  ||| |||||||  |||||||||||||||    
T  27290644 tcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtg 27290729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 28194205 - 28194139
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||| ||||||||||||| || | || ||||||||  | ||||||||||||| |||||||    
T  28194205 cccccgcaagtaggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagttt 28194139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 45132417 - 45132475
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggata 130  Q
    ||||| ||||||||| || |||||| ||| ||||||||| || ||||||||||||||||    
T  45132417 cccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggatcggata 45132475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 4852614 - 4852643
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttc 30  Q
    ||||||||||||||||||||||||||||||    
T  4852614 tcaggttcgattccctctggtgctaatttc 4852643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 19605986 - 19605847
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagag-cttgctgtc--tttaaatggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||  |||||||||||||||| ||  | ||||||||| |||||| ||  ||  || ||   ||| ||||||||||||| |||||     
T  19605986 tcaggttcgattccctctaatgctaatttcggtgggcaag-tccatacagagtcttgctctcacttagaaagggggcccacaagtgggcggtgagattgg 19605888  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||  |  ||||||||||||| |||||||    
T  19605887 tcccctcgaattagttgacacttggatcggatatcgagttt 19605847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 45271444 - 45271497
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgct 58  Q
    ||||||||||||||||||| |||||| |||||  || | |||||||||||||||    
T  45271444 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgct 45271497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 32845206 - 32845254
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattctt 120  Q
    |||| |||||||||||||||||||| |||| ||| ||||||| ||||||    
T  32845206 cccctgcaagtgggcggtgggattggtcccttcgaattagtcgattctt 32845254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 40381 - 40520
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||||||||  ||| |||||||  || |||||||||||||||||||||||||     
T  40381 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 40480  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | |||||||||||||| |||||||||||||||| |||||||    
T  40481 t-ccctcggattagtcgattcttggatcggataccgagttt 40520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 53012 - 52872
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||  ||| |||||||  || |||||||| ||||||||| ||||||     
T  53012 tcaggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagcttgctctggctttaaacggggcccccgcaggtgggcggtaggattgg 52913  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| |||||||||||| ||||||| |||||||| |||||||    
T  52912 tcctctcggattagtcgattcttgaatcggataccgagttt 52872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 7450 - 7318
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagctt--gctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||| ||||| ||||||||||||  || | ||||||||||||   ||| |||||||  || |||||||||||||||||||||||||     
T  7450 tcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctttctctggctttaaacggggcccccgcaagtgggcggtgggattgg 7351  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| ||||||||||||||||    
T  7350 tcccctcggattagtcgattcttggatcggata 7318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 1197 - 1058
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||||| || ||||||||||||  || | ||||||||||||||| |  ||||||||||  ||||||||||||| |||||||||||     
T  1197 tcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattgg 1098  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||| ||||||||| |||||||    
T  1097 tcccctcgaattagtcgattctt-gatcggataccgagttt 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 62; Significance: 5e-27; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 9440 - 9301
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggc-cccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||||| || ||||||||||||  || | ||||||||||||||| |  ||||||||||  ||||||||||||| |||||||||||     
T  9440 tcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattgg 9341  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||| ||||||| |||||| ||||||||| |||||||    
T  9340 tcccctcgaattagtcgattctt-gatcggataccgagttt 9301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 12141 - 12019
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||| ||||||| || ||||||||||||  || | ||||||||||||||| |  ||||||||||  |||| ||||||| ||||||||||| |    
T  12141 tcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggccccacaagtggacggtgggattggt 12042  T
Q  99 cccctcggattagtcaattcttg 121  Q
    ||||||| |||||||||||||||    
T  12041 cccctcgaattagtcaattcttg 12019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 39152 - 39288
Alignment:
Q  5 gttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaatggc-cccccgcaagtgggcggtgggattgttccc 101  Q
    ||||||||||||||||||| ||||||||||||  |  | |||||||| ||||  ||| ||||||| ||  ||||||||||||||||||||||||| ||||    
T  39152 gttcgattccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaagtgggcggtgggattggtccc 39251  T
Q  102 ctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||| ||||||||||| |||| |||||||    
T  39252 ctcggattagtcgattcttggatcagataccgagttt 39288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 32344 - 32483
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatg-gccccccgcaagtgggcggtgggattgt 97  Q
    |||||||||||| ||||||| || ||||||||||||  || | ||||||||||||||| |  ||||||||| | |||||||||||||| ||||||||||     
T  32344 tcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggattgg 32443  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||| |||||| ||||||||| |||||||    
T  32444 tcccctcggattagtcgattctt-gatcggataccgagttt 32483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 10834 - 10696
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggccccccgcaagtgggcggtgggattgtt 98  Q
    |||||||||||| ||||||| || ||||||||||||  || | ||||||||||||||| |  ||||||||||  |||| ||||||| ||||||||||| |    
T  10834 tcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggccccacaagtggacggtgggattggt 10735  T
Q  99 cccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||| |||||||||||||| ||||||||| |||||||    
T  10734 cccctcgaattagtcaattctt-gatcggataccgagttt 10696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 97507 - 97367
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||||||||||||||||||| ||||||||||||  || | |||||||||||||  ||| |||||||  || |||||||||||||||||||||||||     
T  97507 tcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacgggacccccgcaagtgggcggtgggattgg 97408  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||| |||| |||||||  || ||||| |||||| |||||||    
T  97407 tcctctcgtattagtcggtttttggaccggataccgagttt 97367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 66884 - 66950
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||| |||||||    
T  66884 cccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 66950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 2493 - 2427
Alignment:
Q  72 cccccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||||||||||||||||| ||||||||||||||||  | |||| |||||||| |||||||    
T  2493 cccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagttt 2427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 8513 - 8452
Alignment:
Q  77 gcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    |||||||||||||||||||| ||| |||||||||||| |||||| ||||||||| |||||||    
T  8513 gcaagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagttt 8452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 29281 - 29144
Alignment:
Q  3 aggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg---ctgtctttaaatggccccccgcaagtgggcggtgggattgttc 99  Q
    ||||||||||||| ||| ||| | ||||||| |||||  | ||||||||||||    ||| ||| |||||| ||||||||| ||| | ||||||||| ||    
T  29281 aggttcgattcccgctgatgccattttcggtcggtaag-tccatacagagctttgctctggcttaaaatggacccccgcaaatggacagtgggattggtc 29183  T
Q  100 ccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||| ||||||||| | ||||||||||||| |||||||    
T  29182 ccctcagattagtcagtccttggatcggataccgagttt 29144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20278 - 20417
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttg--ctgtctttaaa-tggccccccgcaagtgggcggtgggattgt 97  Q
    ||||||| ||||||||||||||| ||||||  ||||  || | |||||| ||||||  ||| |||||||  || ||||||||||||||||||   ||||     
T  20278 tcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattga 20377  T
Q  98 tcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    | | |||||||||||||||||||||| |||||| |||||||    
T  20378 t-ctctcggattagtcaattcttggaccggataccgagttt 20417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 41785 - 41654
Alignment:
Q  1 tcaggttcgattccctctggtgctaatttcggtgggtaaaattcatacagagcttgctgt--ctttaaatggcccccc-gcaagtgggcggtgggattgt 97  Q
    |||||||||||||||||| || | ||||||| || |  || | ||||||||||||||| |  ||||||| ||  |||| ||||||||||  ||||||||     
T  41785 tcaggttcgattccctcttgttccaatttcgttgtgctaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcaatgggattgg 41686  T
Q  98 tcccctcggattagtcaattcttggatcggata 130  Q
    |||||||||||||||| |||||| |||||||||    
T  41685 tcccctcggattagtcgattctt-gatcggata 41654  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 27903 - 27966
Alignment:
Q  75 ccgcaagtgggcggtgggattgttcccctcggattagtcaattcttggatcggataacgagttt 138  Q
    ||||||||||| |||| ||||  ||||||||||||||||  |||||||||| |||| |||||||    
T  27903 ccgcaagtgggtggtgagatttgtcccctcggattagtcggttcttggatcagataccgagttt 27966  T

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