View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2050_high_5 (Length: 360)
Name: NF2050_high_5
Description: NF2050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2050_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 17 - 346
Target Start/End: Complemental strand, 6856115 - 6855786
Alignment:
| Q |
17 |
aatacctaacaataataatacaataaagacaattttatttgtgtggctattgataaattctcacctaaatccatagattcttttctttattgttatatct |
116 |
Q |
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| T |
6856115 |
aatacctaacaataataatacaataaagacaatttcatttgtgtggctattgataaattctcaactaaatccatagattcttttcttttttgccacatct |
6856016 |
T |
|
| Q |
117 |
atctatatctatgtacttactctatgctccactcagctttaactttcttcatcacactataaagtcttcctatcacctctctctttctatcaactcaact |
216 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6856015 |
atctatatctatgtactcactctatgctccactcagctttaactttcttcatcacactataaagtcttcctatcacctctctctttctatcaactcaact |
6855916 |
T |
|
| Q |
217 |
taatccaatcactttggaactcagttccatttcttcttcttaatattcaacaaacttaccaaacttgttttggtttccaataacatattatataatggca |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6855915 |
taatccaatcactttggaactcagttccatttcttcttcttaatattcaacaaacttaccaaacttgttttggtttccaataacatattatataatggca |
6855816 |
T |
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| Q |
317 |
acttctgtgacaattgttggagccattaac |
346 |
Q |
| |
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|||||||||||||||||||||||||||||| |
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| T |
6855815 |
acttctgtgacaattgttggagccattaac |
6855786 |
T |
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