View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20515_low_12 (Length: 374)
Name: NF20515_low_12
Description: NF20515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20515_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 15 - 355
Target Start/End: Original strand, 32130632 - 32130972
Alignment:
| Q |
15 |
aataggtacaggagagaggaacataaaggcatggatgtatataccattattattatattataaaaactcatttgcacgaattagttcacaattcattttg |
114 |
Q |
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| T |
32130632 |
aataggtacaggagagaggaacataaaggcatggatgtatataccattattattatattataaaaactcatttgcacgaattagttcacaattcattttg |
32130731 |
T |
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| Q |
115 |
atatattatagaaacttatcacacttgctctgtcaatatcaattttgatttcctattacatcagtaaaatcatatagcagatcctgcgagttcaaaacta |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
32130732 |
atatattatagaaacttatcacacttgctctgtcaatatcaattttgatttcctattacatcagtaaaatcatacagcagatcctgcgagttcaaaacta |
32130831 |
T |
|
| Q |
215 |
tgaaatccattgaagatcaagatgctgaataaagtattgaaattataattacaataactgtaataaagaaaactgaattgagaatactaaaacattttgt |
314 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
32130832 |
tgaaagccattgaagatcaagatgctgaataaagtattgaaattataattacaataactataataaagaaaactgaattgagaatactaaaacattttgt |
32130931 |
T |
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| Q |
315 |
gtgtgtatgtttacacaacgaaaacaaagcaaacacacgtc |
355 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
32130932 |
gtgtgtatgtttacacaacgaaaacaaagcaaacacacgtc |
32130972 |
T |
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