View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20515_low_17 (Length: 344)

Name: NF20515_low_17
Description: NF20515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20515_low_17
NF20515_low_17
[»] chr8 (12 HSPs)
chr8 (124-168)||(40795369-40795413)
chr8 (126-169)||(39433401-39433444)
chr8 (126-166)||(2554239-2554279)
chr8 (124-163)||(24195246-24195285)
chr8 (124-166)||(17062364-17062406)
chr8 (124-166)||(17585952-17585994)
chr8 (124-166)||(18148827-18148869)
chr8 (132-169)||(12251590-12251627)
chr8 (132-169)||(39443581-39443618)
chr8 (124-168)||(6582281-6582325)
chr8 (122-166)||(15225799-15225843)
chr8 (124-168)||(17898071-17898115)
[»] chr3 (25 HSPs)
chr3 (123-167)||(25527862-25527906)
chr3 (132-169)||(22762396-22762433)
chr3 (126-169)||(36170117-36170160)
chr3 (124-159)||(42784958-42784993)
chr3 (95-160)||(7651186-7651254)
chr3 (124-166)||(38130984-38131026)
chr3 (124-166)||(38559921-38559963)
chr3 (124-170)||(53996289-53996335)
chr3 (124-169)||(10843806-10843851)
chr3 (124-169)||(19468442-19468487)
chr3 (124-169)||(23332641-23332686)
chr3 (124-169)||(36354544-36354589)
chr3 (124-161)||(38573598-38573635)
chr3 (123-168)||(43011314-43011359)
chr3 (136-168)||(1707785-1707817)
chr3 (124-168)||(3612207-3612251)
chr3 (124-160)||(5941319-5941355)
chr3 (124-168)||(7824799-7824843)
chr3 (124-168)||(7827500-7827544)
chr3 (124-168)||(7829888-7829932)
chr3 (124-160)||(8942017-8942053)
chr3 (95-158)||(17755123-17755189)
chr3 (95-158)||(19056443-19056509)
chr3 (126-166)||(28244131-28244171)
chr3 (126-162)||(36918899-36918935)
[»] chr1 (21 HSPs)
chr1 (132-168)||(4770661-4770697)
chr1 (124-166)||(12213987-12214029)
chr1 (126-168)||(41032923-41032965)
chr1 (126-163)||(11410624-11410661)
chr1 (124-165)||(32209863-32209904)
chr1 (124-168)||(28832196-28832240)
chr1 (132-167)||(5553034-5553069)
chr1 (124-163)||(10841897-10841936)
chr1 (132-163)||(15382852-15382883)
chr1 (126-169)||(21965919-21965962)
chr1 (124-167)||(35690205-35690248)
chr1 (126-160)||(7550896-7550930)
chr1 (123-169)||(26329146-26329192)
chr1 (124-166)||(27853349-27853391)
chr1 (124-166)||(51067919-51067961)
chr1 (132-169)||(6423795-6423832)
chr1 (124-157)||(17339218-17339251)
chr1 (124-169)||(29935974-29936019)
chr1 (124-169)||(44365973-44366018)
chr1 (126-166)||(23524818-23524858)
chr1 (124-168)||(36467050-36467094)
[»] chr7 (12 HSPs)
chr7 (126-165)||(2450575-2450614)
chr7 (124-168)||(3672577-3672621)
chr7 (124-168)||(43539129-43539173)
chr7 (126-168)||(27993056-27993098)
chr7 (124-162)||(34722046-34722084)
chr7 (124-169)||(28200410-28200455)
chr7 (132-169)||(38435959-38435996)
chr7 (132-169)||(42995267-42995304)
chr7 (124-160)||(429203-429239)
chr7 (95-166)||(5526719-5526793)
chr7 (124-168)||(8883545-8883589)
chr7 (132-160)||(26980969-26980997)
[»] chr4 (15 HSPs)
chr4 (124-171)||(19479502-19479549)
chr4 (124-167)||(24837498-24837541)
chr4 (132-169)||(44724374-44724411)
chr4 (127-167)||(39489599-39489639)
chr4 (126-168)||(35021494-35021536)
chr4 (124-165)||(11949688-11949729)
chr4 (132-169)||(26871719-26871756)
chr4 (124-160)||(6459949-6459985)
chr4 (124-160)||(7371573-7371609)
chr4 (126-170)||(32430150-32430194)
chr4 (124-160)||(32923255-32923291)
chr4 (122-166)||(35997993-35998037)
chr4 (126-166)||(38340347-38340387)
chr4 (124-160)||(40070993-40071029)
chr4 (132-160)||(56361847-56361875)
[»] chr2 (9 HSPs)
chr2 (126-169)||(1692737-1692780)
chr2 (124-169)||(8761589-8761634)
chr2 (124-169)||(37119283-37119328)
chr2 (124-162)||(19159939-19159977)
chr2 (124-161)||(9718393-9718430)
chr2 (124-165)||(10977084-10977125)
chr2 (124-165)||(19967413-19967454)
chr2 (124-160)||(9964491-9964527)
chr2 (124-168)||(41682412-41682456)
[»] chr6 (13 HSPs)
chr6 (124-166)||(13496110-13496152)
chr6 (95-167)||(2445292-2445367)
chr6 (95-166)||(9311923-9311997)
chr6 (126-169)||(18313924-18313967)
chr6 (132-166)||(21857084-21857118)
chr6 (124-165)||(4379510-4379551)
chr6 (124-169)||(12700446-12700491)
chr6 (95-167)||(24623310-24623385)
chr6 (124-165)||(28951394-28951435)
chr6 (141-169)||(1225192-1225220)
chr6 (124-168)||(9558440-9558484)
chr6 (124-160)||(11118686-11118722)
chr6 (124-160)||(12904342-12904378)
[»] chr5 (14 HSPs)
chr5 (124-174)||(42608890-42608940)
chr5 (125-166)||(33369439-33369480)
chr5 (124-160)||(13864344-13864380)
chr5 (124-166)||(18589892-18589934)
chr5 (124-166)||(22585646-22585688)
chr5 (124-166)||(25928908-25928950)
chr5 (132-169)||(9699919-9699956)
chr5 (132-169)||(10515352-10515389)
chr5 (126-167)||(24498577-24498618)
chr5 (124-169)||(26034633-26034678)
chr5 (128-169)||(28736893-28736934)
chr5 (124-169)||(40056615-40056660)
chr5 (124-160)||(13796330-13796366)
chr5 (95-166)||(29695009-29695083)
[»] scaffold0095 (1 HSPs)
scaffold0095 (132-169)||(148-185)
[»] scaffold0088 (1 HSPs)
scaffold0088 (132-169)||(55509-55546)
[»] scaffold0021 (1 HSPs)
scaffold0021 (126-167)||(161134-161175)


Alignment Details
Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 40795413 - 40795369
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  40795413 tattatgtattgttcataccaactgagttaagctcacaatgacaa 40795369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 39433444 - 39433401
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||    
T  39433444 ttatgtattgttcatatcaactgagctaagctcacgaggacaaa 39433401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 2554239 - 2554279
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  2554239 ttatgtattgtccatatcaactgagctaagctcacaaggac 2554279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 24195285 - 24195246
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaag 163  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  24195285 tattatgtattgttcatatcaactgagctaagttcacaag 24195246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 17062364 - 17062406
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    |||||||||||||  |||||||||||||||||||||| |||||    
T  17062364 tattatgtattgtctatatcaactgagttaagctcacgaggac 17062406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 17585994 - 17585952
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    |||||||||||||  |||||||||||||||||||||| |||||    
T  17585994 tattatgtattgtctatatcaactgagttaagctcacgaggac 17585952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 18148827 - 18148869
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||    
T  18148827 tattatgcattgttcatattaactgagttaagctcacgaggac 18148869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 12251590 - 12251627
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  12251590 attgttcctatcaactgagttaagctcacgaggacaaa 12251627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 39443618 - 39443581
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  39443618 attgttcctatcaactgagttaagctcacgaggacaaa 39443581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 6582325 - 6582281
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    |||||||||||||| ||||||| ||||||||| ||||||| ||||    
T  6582325 tattatgtattgttaatatcaattgagttaagttcacaagaacaa 6582281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 15225843 - 15225799
Alignment:
Q  122 agtattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||||| ||||| ||||  |||||||||||||||||||||||    
T  15225843 agtattatgcattgtccatactaactgagttaagctcacaaggac 15225799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 17898115 - 17898071
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    |||||||| |||| |||| |||||||||||||||||| |||||||    
T  17898115 tattatgttttgtccataccaactgagttaagctcactaggacaa 17898071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 25527862 - 25527906
Alignment:
Q  123 gtattatgtattgttcatatcaactgagttaagctcacaaggaca 167  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  25527862 gtattatgaattgttcataccaactgagttaagctcacaaggaca 25527906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 22762396 - 22762433
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  22762396 attgttcctatcaactgagttaagctcacaaggacaaa 22762433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 36170117 - 36170160
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||    
T  36170117 ttatgcattgttcatatcaattgagttaagctcacgaggacaaa 36170160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 159
Target Start/End: Complemental strand, 42784993 - 42784958
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctca 159  Q
    ||||||||||||| ||||||||||||||||||||||    
T  42784993 tattatgtattgtccatatcaactgagttaagctca 42784958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 7651254 - 7651186
Alignment:
Q  95 gtggtcggcgtttgaaccccgaatctta---gtattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||||||||||||||||||| ||||    || |||| ||||| | |||||||||||||||||||||    
T  7651254 gtggtcggcgtttgaaccccgaaccttatatatactatgcattgtccctatcaactgagttaagctcac 7651186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 38130984 - 38131026
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||    
T  38130984 tattatgcattgtccataccaactgagttaagctcacaaggac 38131026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 38559921 - 38559963
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||    
T  38559921 tattatgcattgttcataccaactgagttacgctcacaaggac 38559963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 53996335 - 53996289
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaac 170  Q
    ||||||| ||||| |||| |||||||| |||||||||||||||||||    
T  53996335 tattatgcattgtccataccaactgagctaagctcacaaggacaaac 53996289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 10843806 - 10843851
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||||||| |||||| |||||||||||||||||| || |||||    
T  10843806 tattatgtattattcataccaactgagttaagctcacgagaacaaa 10843851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 19468487 - 19468442
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||| |||| |||||||||||||||||||| ||||||    
T  19468487 tattatgcattgtccataccaactgagttaagctcacaaagacaaa 19468442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 23332686 - 23332641
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| |||||||||||||||| ||||||| |||| ||||||||    
T  23332686 tattatgcattgttcatatcaactaagttaagttcacgaggacaaa 23332641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 36354544 - 36354589
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    |||||| |||| ||||||||||||||| |||||||||||| |||||    
T  36354544 tattatatatttttcatatcaactgagctaagctcacaagaacaaa 36354589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 38573598 - 38573635
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcaca 161  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  38573598 tattatgcattgttcttatcaactgagttaagctcaca 38573635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 43011359 - 43011314
Alignment:
Q  123 gtattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||||||||||  ||||||||||||||| |||||| |||||||    
T  43011359 gtattatgtattgtctatatcaactgagttaggctcacgaggacaa 43011314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 1707785 - 1707817
Alignment:
Q  136 ttcatatcaactgagttaagctcacaaggacaa 168  Q
    |||||| ||||||||||||||||||||||||||    
T  1707785 ttcataccaactgagttaagctcacaaggacaa 1707817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 3612207 - 3612251
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||| ||| | ||||||||||||| |||||||||||||||||    
T  3612207 tattatgcattatccatatcaactgagctaagctcacaaggacaa 3612251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 5941319 - 5941355
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  5941319 tattatgcattgttcataccaactgagttaagctcac 5941355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 7824843 - 7824799
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    |||||||||||||  |||||||||||||||| ||||| |||||||    
T  7824843 tattatgtattgtctatatcaactgagttaaactcacgaggacaa 7824799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 7827544 - 7827500
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  7827544 tattatgcattgtccatatcaactgagttaaactcacgaggacaa 7827500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 7829932 - 7829888
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  7829932 tattatgcattgtccatatcaactgagttaaactcacgaggacaa 7829888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 8942053 - 8942017
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  8942053 tattatgcattgttcataccaactgagttaagctcac 8942017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 17755189 - 17755123
Alignment:
Q  95 gtggtcggcgtttgaaccccgaatcttag---tattatgtattgttcatatcaactgagttaagctc 158  Q
    ||||||||  ||||||||||||| ||||    ||||||||||||||| ||||||||||| |||||||    
T  17755189 gtggtcggaatttgaaccccgaaccttacatatattatgtattgttcctatcaactgagctaagctc 17755123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 19056509 - 19056443
Alignment:
Q  95 gtggtcggcgtttgaaccccgaatcttag---tattatgtattgttcatatcaactgagttaagctc 158  Q
    ||||||||  ||||||||||||| ||||    ||||||||||||||| ||||||||||| |||||||    
T  19056509 gtggtcggaatttgaaccccgaaccttacatatattatgtattgttcctatcaactgagctaagctc 19056443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 28244131 - 28244171
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||| |||||||||| |||||||||||||||||| |||||    
T  28244131 ttatgcattgttcataccaactgagttaagctcacgaggac 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 36918899 - 36918935
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaa 162  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  36918899 ttatgcattgttcctatcaactgagttaagctcacaa 36918935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 4770661 - 4770697
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaa 168  Q
    |||||||||||||||||||||||||||||||||||||    
T  4770661 attgttcatatcaactgagttaagctcacaaggacaa 4770697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 12214029 - 12213987
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  12214029 tattatgtattgttcctatcaactgagctaagctcacaaggac 12213987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 41032965 - 41032923
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  41032965 ttatgcattgttcatatcaactgagttaagctcacgaggacaa 41032923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 11410661 - 11410624
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaag 163  Q
    |||||||||||||||| |||||||||||||||||||||    
T  11410661 ttatgtattgttcataccaactgagttaagctcacaag 11410624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 32209863 - 32209904
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaagga 165  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  32209863 tattatgtattgttcctatcaactgaggtaagctcacaagga 32209904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 28832196 - 28832240
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||    
T  28832196 tattatgcattgttcataccaactgagttaagctcacaagaacaa 28832240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 167
Target Start/End: Original strand, 5553034 - 5553069
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggaca 167  Q
    ||||||||||||||||||||||||| ||||||||||    
T  5553034 attgttcatatcaactgagttaagcccacaaggaca 5553069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 10841936 - 10841897
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaag 163  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  10841936 tattatgcattgtccatatcaactgagttaagctcacaag 10841897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 163
Target Start/End: Original strand, 15382852 - 15382883
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaag 163  Q
    ||||||||||||||||||||||||||||||||    
T  15382852 attgttcatatcaactgagttaagctcacaag 15382883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 21965919 - 21965962
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||    
T  21965919 ttatgcattattcatatcaactgagctaagctcacaaggacaaa 21965962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 35690248 - 35690205
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggaca 167  Q
    ||||||||||| ||| || |||||||||||||||||||||||||    
T  35690248 tattatgtattattcctaccaactgagttaagctcacaaggaca 35690205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 7550930 - 7550896
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||| |||||||||||||||||||||||||||||    
T  7550930 ttatgcattgttcatatcaactgagttaagctcac 7550896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 26329146 - 26329192
Alignment:
Q  123 gtattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    |||||||| ||||||| ||||||||||| |||||| |||||||||||    
T  26329146 gtattatgcattgttcttatcaactgagctaagctaacaaggacaaa 26329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 27853391 - 27853349
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||| |||||||||| |||||||||||||||||| |||||    
T  27853391 tattatgcattgttcataccaactgagttaagctcacgaggac 27853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 51067919 - 51067961
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||||||| ||| || ||||||||||||||||||||||||    
T  51067919 tattatgtattattcttaccaactgagttaagctcacaaggac 51067961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 6423795 - 6423832
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  6423795 attgttcataccaactgagttaagctcacgaggacaaa 6423832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 17339251 - 17339218
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagct 157  Q
    |||||||||||||||||| |||||||||||||||    
T  17339251 tattatgtattgttcataccaactgagttaagct 17339218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 29936019 - 29935974
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||| |||| |||||||||||| ||||||||||||||    
T  29936019 tattatgcattgtccataccaactgagttaaactcacaaggacaaa 29935974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 44365973 - 44366018
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||||||||||| || |||||||||||| ||||| ||||||||    
T  44365973 tattatgtattgttcctaccaactgagttaaactcacgaggacaaa 44366018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 23524858 - 23524818
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||| |||||||  ||||||||||||||||||||||||||    
T  23524858 ttatgcattgttccaatcaactgagttaagctcacaaggac 23524818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 36467050 - 36467094
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||| ||||| |||||||| ||| ||||||||||||||||||    
T  36467050 tattatgcattgtccatatcaattgaattaagctcacaaggacaa 36467094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 165
Target Start/End: Complemental strand, 2450614 - 2450575
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaagga 165  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  2450614 ttatgtattgttcataccaactgagttaagctcacaagga 2450575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 3672577 - 3672621
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||||    
T  3672577 tattatgtattgtccatatcaactgagctaaactcacaaggacaa 3672621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 43539129 - 43539173
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||    
T  43539129 tattatgcattgttcctatcaactgagctaagctcacaaggacaa 43539173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 27993056 - 27993098
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||| |||||||||| |||||||||||||||||| |||||||    
T  27993056 ttatgcattgttcataccaactgagttaagctcacgaggacaa 27993098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 34722046 - 34722084
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaa 162  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  34722046 tattatgcattgttcataccaactgagttaagctcacaa 34722084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 28200410 - 28200455
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||||||||||| || |||||||||||||||||| | ||||||    
T  28200410 tattatgtattgttcctaccaactgagttaagctcacgatgacaaa 28200455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 38435959 - 38435996
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  38435959 attgttcctatcaactgagttaagctcacgaggacaaa 38435996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 42995304 - 42995267
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  42995304 attgttcctatcaactgagttaagctcacgaggacaaa 42995267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 429203 - 429239
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||||||| | |||||||||||||||||||||||    
T  429203 tattatgtattatccatatcaactgagttaagctcac 429239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 5526793 - 5526719
Alignment:
Q  95 gtggtcggcgtttgaaccccgaatctta---gtattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    |||||||| ||||||||||| |||||||    ||||||| ||||| |||| |||||||| ||||||||| |||||    
T  5526793 gtggtcggggtttgaaccccaaatcttatatatattatgcattgtccataccaactgagctaagctcacgaggac 5526719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 8883589 - 8883545
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||| ||||| |||| |||||||||||||||||| |||||||    
T  8883589 tattatgcattgtccataccaactgagttaagctcacgaggacaa 8883545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 26980969 - 26980997
Alignment:
Q  132 attgttcatatcaactgagttaagctcac 160  Q
    |||||||||||||||||||||||||||||    
T  26980969 attgttcatatcaactgagttaagctcac 26980997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 19479502 - 19479549
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaact 171  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  19479502 tattatgcattgttcatattaactgagctaagctcacaaggacaaact 19479549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 24837498 - 24837541
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggaca 167  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  24837498 tattatgtattgttcatatcaactaagttaagctcacgaggaca 24837541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 44724411 - 44724374
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    |||||||||| |||||||||||||||||||||||||||    
T  44724411 attgttcataccaactgagttaagctcacaaggacaaa 44724374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 39489639 - 39489599
Alignment:
Q  127 tatgtattgttcatatcaactgagttaagctcacaaggaca 167  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  39489639 tatgtattgttcctatcaactgaattaagctcacaaggaca 39489599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 35021494 - 35021536
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||    
T  35021494 ttatgtattgtccatatcaactgagctaagctcacgaggacaa 35021536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 11949688 - 11949729
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaagga 165  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||    
T  11949688 tattatgtattgttcttatcaactgagctaagctcacgagga 11949729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 26871719 - 26871756
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  26871719 attgttcctatcaactgagttaagctcacgaggacaaa 26871756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 6459949 - 6459985
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  6459949 tattatgcattgtccatatcaactgagttaagctcac 6459985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 7371573 - 7371609
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||||||||| | |||||||||||||||||||||    
T  7371573 tattatgtattgtccttatcaactgagttaagctcac 7371609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 32430150 - 32430194
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggacaaac 170  Q
    ||||| ||||||||||  ||||||||||||||||| |||||||||    
T  32430150 ttatgcattgttcatactaactgagttaagctcacgaggacaaac 32430194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 32923255 - 32923291
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  32923255 tattatgcattgttcataccaactgagttaagctcac 32923291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 35998037 - 35997993
Alignment:
Q  122 agtattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||||| ||||| ||||||||||||| ||| |||||||||||    
T  35998037 agtattatgcattgtccatatcaactgagctaaactcacaaggac 35997993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 38340347 - 38340387
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||||||| |||| |||||||||||||||||| |||||    
T  38340347 ttatgtattgtccataccaactgagttaagctcacgaggac 38340387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 40070993 - 40071029
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  40070993 tattatgcattgttcataccaactgagttaagctcac 40071029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 56361847 - 56361875
Alignment:
Q  132 attgttcatatcaactgagttaagctcac 160  Q
    |||||||||||||||||||||||||||||    
T  56361847 attgttcatatcaactgagttaagctcac 56361875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 1692737 - 1692780
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  1692737 ttatgcattgttcatatcaattgagttaagctcacaaggacaaa 1692780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 8761589 - 8761634
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||||||||| |||| |||||||||||||||||| ||||||||    
T  8761589 tattatgtattgtccataccaactgagttaagctcacgaggacaaa 8761634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 37119283 - 37119328
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  37119283 tattatgcattgttcatatcaactgagttaaactcacaatgacaaa 37119328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 19159977 - 19159939
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaa 162  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  19159977 tattatgcattgttcatatcaactgagttaagcttacaa 19159939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 9718430 - 9718393
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcaca 161  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  9718430 tattatgcattgttcttatcaactgagttaagctcaca 9718393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 10977084 - 10977125
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaagga 165  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||    
T  10977084 tattatgtatttttcatatcaaccgagttaagctcacgagga 10977125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 19967454 - 19967413
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaagga 165  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||    
T  19967454 tattatgcattgttcatatcaactgagctaagctcacgagga 19967413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 9964527 - 9964491
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  9964527 tattacgtattgttcatatcaactgagttaaactcac 9964491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 41682412 - 41682456
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    ||||||| ||| || ||| ||||||||||||||||||||||||||    
T  41682412 tattatgcattatttataccaactgagttaagctcacaaggacaa 41682456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 13496152 - 13496110
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||| ||||||||||||||||||||||||||||| |||||    
T  13496152 tattatgcattgttcatatcaactgagttaagctcacgaggac 13496110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 2445367 - 2445292
Alignment:
Q  95 gtggtcggcgtttgaaccccgaatcttag---tattatgtattgttcatatcaactgagttaagctcacaaggaca 167  Q
    |||||||| ||| ||||||||||||||     ||||||| |||||||||||||||||||||||||| || ||||||    
T  2445367 gtggtcggggttcgaaccccgaatcttgtatatattatgcattgttcatatcaactgagttaagcttacgaggaca 2445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 9311923 - 9311997
Alignment:
Q  95 gtggtcggcgtttgaaccccgaatcttag---tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    |||||||| ||||||||| | |||||||    ||||||||||| |||||| |||||||||||||||||| |||||    
T  9311923 gtggtcggggtttgaacctcaaatcttacatatattatgtattattcataccaactgagttaagctcacgaggac 9311997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 18313967 - 18313924
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||    
T  18313967 ttatgcattgttcctatcaactgagttaagctcacgaggacaaa 18313924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 21857084 - 21857118
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggac 166  Q
    |||||||||| ||||||||||||||||||||||||    
T  21857084 attgttcataccaactgagttaagctcacaaggac 21857118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 4379510 - 4379551
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaagga 165  Q
    ||||||||||||||| || |||||||||||||||||| ||||    
T  4379510 tattatgtattgttcctaccaactgagttaagctcacgagga 4379551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 12700446 - 12700491
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| |||||||||| |||||||  ||||||||||||||||||    
T  12700446 tattatgcattgttcataccaactgaactaagctcacaaggacaaa 12700491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 24623310 - 24623385
Alignment:
Q  95 gtggtcggcgtttgaaccccgaatcttag---tattatgtattgttcatatcaactgagttaagctcacaaggaca 167  Q
    |||||||| |||||||||||||| ||||    ||||||| ||||| ||||||||||||| ||| ||||||| ||||    
T  24623310 gtggtcggggtttgaaccccgaaccttacatatattatgcattgtccatatcaactgagctaaactcacaaagaca 24623385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 28951435 - 28951394
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaagga 165  Q
    ||||||| |||||||||| |||||||||||||||||| ||||    
T  28951435 tattatgcattgttcataccaactgagttaagctcacgagga 28951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 169
Target Start/End: Complemental strand, 1225220 - 1225192
Alignment:
Q  141 atcaactgagttaagctcacaaggacaaa 169  Q
    |||||||||||||||||||||||||||||    
T  1225220 atcaactgagttaagctcacaaggacaaa 1225192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 9558484 - 9558440
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaa 168  Q
    |||||||||||||||||| |||| ||| ||||||||| |||||||    
T  9558484 tattatgtattgttcataccaaccgagctaagctcacgaggacaa 9558440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 11118686 - 11118722
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    |||||||||||||||||||| |||||| |||||||||    
T  11118686 tattatgtattgttcatatctactgagctaagctcac 11118722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 12904342 - 12904378
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  12904342 tattatgcattgttcatatcaactgaggtaagctcac 12904378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 42608890 - 42608940
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaactttt 174  Q
    ||||||| |||||||||||||||||||||||||| ||||||| ||| ||||    
T  42608890 tattatgcattgttcatatcaactgagttaagcttacaaggataaattttt 42608940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 33369439 - 33369480
Alignment:
Q  125 attatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  33369439 attatgtattgttcataccaactgagttaagctcacgaggac 33369480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 13864380 - 13864344
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13864380 tattatgtattgttcataccaactgagttaagctcac 13864344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 18589892 - 18589934
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||| |||||||||| |||||||||||||||||| |||||    
T  18589892 tattatgcattgttcataccaactgagttaagctcacgaggac 18589934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 22585688 - 22585646
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||    
T  22585688 tattatgcattgttcatatcaactgagttaagcccacgaggac 22585646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 25928950 - 25928908
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    ||||||||||||| |||||||| |||||||||||||| |||||    
T  25928950 tattatgtattgtccatatcaattgagttaagctcacgaggac 25928908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 9699956 - 9699919
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  9699956 attgttcctatcaactgagttaagctcacgaggacaaa 9699919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 10515389 - 10515352
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  10515389 attgtccatatcaactaagttaagctcacaaggacaaa 10515352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 24498618 - 24498577
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggaca 167  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||    
T  24498618 ttatgcattattcatatcaactgagttaagctcacgaggaca 24498577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 26034633 - 26034678
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| |||||||||| |||||||||||||||||| || |||||    
T  26034633 tattatgcattgttcataccaactgagttaagctcacgagaacaaa 26034678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 28736934 - 28736893
Alignment:
Q  128 atgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||||| |||| |||||||||||||||||| ||||||||    
T  28736934 atgtattgtccataacaactgagttaagctcacgaggacaaa 28736893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 40056615 - 40056660
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||| | || |||||||||||||||||||||||||||    
T  40056615 tattatgcattgtccttaccaactgagttaagctcacaaggacaaa 40056660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 13796366 - 13796330
Alignment:
Q  124 tattatgtattgttcatatcaactgagttaagctcac 160  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  13796366 tattatgcattgttcatatcgactgagttaagctcac 13796330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 29695083 - 29695009
Alignment:
Q  95 gtggtcggcgtttgaaccccgaatcttag---tattatgtattgttcatatcaactgagttaagctcacaaggac 166  Q
    |||||||| ||||||||| |||| ||||    ||||||| ||||| |||||||||||||||||| |||| |||||    
T  29695083 gtggtcggggtttgaaccacgaaccttacatatattatgcattgtccatatcaactgagttaaggtcacgaggac 29695009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 185 - 148
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  185 attgttcctatcaactgagttaagctcacgaggacaaa 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 55509 - 55546
Alignment:
Q  132 attgttcatatcaactgagttaagctcacaaggacaaa 169  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  55509 attgttcctatcaactgagtaaagctcacaaggacaaa 55546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 161175 - 161134
Alignment:
Q  126 ttatgtattgttcatatcaactgagttaagctcacaaggaca 167  Q
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T  161175 ttatgcattgtccataccaactgagttaagctcacaaggaca 161134  T

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