View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20519_high_29 (Length: 314)
Name: NF20519_high_29
Description: NF20519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20519_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 16 - 302
Target Start/End: Original strand, 30098854 - 30099140
Alignment:
| Q |
16 |
caatatagtttacatattatgagtattgatttaacatagaccaaatattacaagaactaacaccaagatgatgaagaccaaaaccaaatgttcccttttt |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30098854 |
caatatagtttacatattatgagtattgatttaacatagaccaaatattacaagaactaacaccaagatgatgaagaccaaaaccaaatgttcccttttt |
30098953 |
T |
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| Q |
116 |
cagggattaaaactaactgatgtctcacaaaaccaaatattgggtgttgtgctggtgatcagattctaaatcaattggaaaacccccaaacttttggggc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
30098954 |
cagggattaaaactaactgatgtctcacaaaaccaaattttgggttttgtgctggtgatcaaattctaaatcaattggaaaacccccaaacttttggggc |
30099053 |
T |
|
| Q |
216 |
taaatacagtatacatgtatagggttttctaatgcaaaacttaatcacaaacactaatccgattactagctaactacggcttcagaa |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
30099054 |
taaatacagtatacatgtatagggttttctaatgcaaaacttaatcacaaacactaatccgattactagctaactagggcttcagaa |
30099140 |
T |
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