View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20519_high_3 (Length: 850)

Name: NF20519_high_3
Description: NF20519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20519_high_3
NF20519_high_3
[»] chr1 (37 HSPs)
chr1 (43-407)||(41655580-41655949)
chr1 (545-630)||(11434745-11434830)
chr1 (545-631)||(32713200-32713286)
chr1 (756-842)||(41655369-41655449)
chr1 (1-43)||(11398010-11398052)
chr1 (1-46)||(5855463-5855508)
chr1 (545-622)||(7013655-7013732)
chr1 (542-586)||(19062891-19062935)
chr1 (3-46)||(2981055-2981098)
chr1 (2-45)||(10422730-10422773)
chr1 (545-584)||(32306413-32306452)
chr1 (434-489)||(45886883-45886938)
chr1 (1-43)||(8763935-8763977)
chr1 (1-43)||(15238228-15238270)
chr1 (1-43)||(25165346-25165388)
chr1 (545-591)||(33296570-33296616)
chr1 (1-43)||(41743217-41743259)
chr1 (5-43)||(49078058-49078096)
chr1 (549-586)||(7013261-7013298)
chr1 (1-46)||(18915808-18915853)
chr1 (545-586)||(21258321-21258362)
chr1 (2-43)||(33418238-33418279)
chr1 (1-44)||(32151044-32151087)
chr1 (1-44)||(40288599-40288642)
chr1 (1-43)||(9853399-9853440)
chr1 (1-43)||(26325756-26325798)
chr1 (1-43)||(34877934-34877976)
chr1 (1-43)||(40226364-40226406)
chr1 (2-44)||(48798193-48798235)
chr1 (640-705)||(7013158-7013223)
chr1 (435-500)||(7013158-7013223)
chr1 (574-627)||(37920147-37920200)
chr1 (5-42)||(41663982-41664019)
chr1 (1-42)||(42744732-42744773)
chr1 (542-607)||(45797591-45797656)
chr1 (2-43)||(46929860-46929901)
chr1 (545-586)||(49000701-49000742)
[»] chr7 (33 HSPs)
chr7 (545-725)||(30859752-30859933)
chr7 (416-500)||(30859752-30859837)
chr7 (1-44)||(48804628-48804671)
chr7 (1-43)||(19914823-19914865)
chr7 (1-43)||(43925458-43925500)
chr7 (1-45)||(1797404-1797448)
chr7 (548-628)||(16488152-16488232)
chr7 (1-45)||(47341820-47341864)
chr7 (1-43)||(4195323-4195365)
chr7 (640-726)||(13798496-13798582)
chr7 (434-500)||(13798516-13798582)
chr7 (1-43)||(21530694-21530736)
chr7 (1-43)||(22993488-22993530)
chr7 (640-726)||(31877359-31877444)
chr7 (574-620)||(42629201-42629247)
chr7 (3-43)||(5039541-5039581)
chr7 (1-45)||(8734807-8734851)
chr7 (1-45)||(10047997-10048041)
chr7 (1-45)||(39420782-39420826)
chr7 (1-40)||(11607080-11607119)
chr7 (1-44)||(18785614-18785657)
chr7 (545-584)||(23284776-23284815)
chr7 (1-44)||(27875208-27875251)
chr7 (1-44)||(45447915-45447958)
chr7 (1-43)||(4228872-4228914)
chr7 (1-43)||(13095804-13095846)
chr7 (1-43)||(16802069-16802111)
chr7 (1-43)||(22268150-22268192)
chr7 (1-43)||(34127741-34127783)
chr7 (3-41)||(34659174-34659212)
chr7 (545-591)||(38458269-38458315)
chr7 (2-48)||(43346901-43346947)
chr7 (1-46)||(42210383-42210428)
[»] chr6 (25 HSPs)
chr6 (545-622)||(32879698-32879775)
chr6 (545-619)||(26622234-26622308)
chr6 (545-619)||(26728212-26728286)
chr6 (1-44)||(21898594-21898637)
chr6 (1-43)||(2271422-2271464)
chr6 (3-45)||(21016874-21016916)
chr6 (1-40)||(13036125-13036164)
chr6 (573-620)||(31778837-31778884)
chr6 (1-43)||(5253344-5253386)
chr6 (1-43)||(5759575-5759617)
chr6 (1-43)||(6606218-6606260)
chr6 (1-43)||(15643949-15643991)
chr6 (1-43)||(19230678-19230720)
chr6 (1-43)||(24671987-24672029)
chr6 (2-43)||(14107480-14107521)
chr6 (1-45)||(13468878-13468922)
chr6 (1-45)||(17115018-17115062)
chr6 (1-44)||(3030739-3030782)
chr6 (2-45)||(29444887-29444930)
chr6 (574-620)||(1860386-1860432)
chr6 (1-43)||(8612095-8612137)
chr6 (2-44)||(8938657-8938699)
chr6 (1-43)||(9179857-9179899)
chr6 (1-43)||(10311590-10311632)
chr6 (545-590)||(2146783-2146827)
[»] chr5 (36 HSPs)
chr5 (545-622)||(25994552-25994629)
chr5 (545-629)||(14410737-14410821)
chr5 (545-630)||(17854695-17854780)
chr5 (545-622)||(25994914-25994991)
chr5 (1-46)||(6767172-6767217)
chr5 (545-622)||(26092579-26092656)
chr5 (1-44)||(28856920-28856963)
chr5 (1-43)||(5732041-5732083)
chr5 (1-43)||(19572668-19572710)
chr5 (1-43)||(28857072-28857114)
chr5 (574-623)||(32804888-32804937)
chr5 (1-45)||(42086269-42086313)
chr5 (574-629)||(14410237-14410292)
chr5 (2-45)||(18136402-18136445)
chr5 (574-621)||(25868504-25868551)
chr5 (1-43)||(7866525-7866567)
chr5 (545-591)||(20419544-20419590)
chr5 (1-43)||(20525782-20525824)
chr5 (1-43)||(23383592-23383634)
chr5 (438-500)||(26092490-26092552)
chr5 (1-43)||(41163580-41163622)
chr5 (547-628)||(25868108-25868189)
chr5 (549-622)||(26093012-26093085)
chr5 (5-46)||(37263182-37263223)
chr5 (4-44)||(1538374-1538414)
chr5 (1-45)||(35403633-35403677)
chr5 (2-46)||(35561940-35561984)
chr5 (1-43)||(8513463-8513505)
chr5 (1-43)||(9812816-9812858)
chr5 (1-43)||(12704958-12705000)
chr5 (2-44)||(16755004-16755046)
chr5 (1-43)||(30349523-30349565)
chr5 (1-43)||(39728331-39728373)
chr5 (575-620)||(7732848-7732893)
chr5 (1-46)||(25417304-25417348)
chr5 (545-586)||(32303662-32303702)
[»] chr4 (51 HSPs)
chr4 (545-623)||(32304747-32304825)
chr4 (545-725)||(36153939-36154117)
chr4 (545-621)||(53260184-53260260)
chr4 (545-622)||(32303914-32303991)
chr4 (545-629)||(19487518-19487602)
chr4 (562-623)||(11660950-11661011)
chr4 (1-46)||(29895732-29895777)
chr4 (1-44)||(1446773-1446816)
chr4 (573-628)||(40361676-40361731)
chr4 (1-43)||(3574567-3574609)
chr4 (414-500)||(36154033-36154119)
chr4 (1-43)||(55920982-55921024)
chr4 (545-628)||(36153453-36153537)
chr4 (1-45)||(41163003-41163047)
chr4 (1-40)||(6032761-6032800)
chr4 (1-44)||(24166397-24166440)
chr4 (1-44)||(27248375-27248418)
chr4 (1-43)||(14567199-14567241)
chr4 (1-43)||(27531778-27531820)
chr4 (574-628)||(40277091-40277145)
chr4 (1-43)||(47078406-47078448)
chr4 (1-45)||(7000470-7000514)
chr4 (448-500)||(14331678-14331730)
chr4 (1-45)||(19651566-19651610)
chr4 (1-45)||(26480070-26480114)
chr4 (1-45)||(41339516-41339560)
chr4 (1-45)||(52950028-52950072)
chr4 (679-722)||(18886592-18886635)
chr4 (640-719)||(20779920-20779999)
chr4 (414-500)||(42040390-42040476)
chr4 (1-44)||(43458560-43458603)
chr4 (545-584)||(46844626-46844665)
chr4 (1-44)||(53599007-53599050)
chr4 (1-43)||(1940895-1940937)
chr4 (1-43)||(2559255-2559297)
chr4 (545-591)||(5314391-5314437)
chr4 (1-43)||(6779159-6779201)
chr4 (547-621)||(11661015-11661089)
chr4 (5-43)||(12703670-12703708)
chr4 (434-500)||(20779920-20779986)
chr4 (545-591)||(21283878-21283924)
chr4 (545-591)||(23811343-23811389)
chr4 (1-43)||(33647669-33647711)
chr4 (1-43)||(34667723-34667765)
chr4 (1-43)||(38165975-38166017)
chr4 (542-579)||(10011626-10011663)
chr4 (542-579)||(10018767-10018804)
chr4 (512-541)||(19487518-19487547)
chr4 (435-500)||(32303821-32303886)
chr4 (416-500)||(36153358-36153443)
chr4 (2-43)||(48317397-48317438)
[»] chr3 (33 HSPs)
chr3 (545-621)||(16280916-16280992)
chr3 (1-47)||(26207923-26207969)
chr3 (1-46)||(25294900-25294945)
chr3 (1-43)||(29762277-29762319)
chr3 (5-46)||(10040497-10040538)
chr3 (1-45)||(10855325-10855369)
chr3 (1-45)||(48341961-48342005)
chr3 (1-44)||(13893868-13893911)
chr3 (431-489)||(7953376-7953434)
chr3 (1-43)||(37092627-37092669)
chr3 (1-43)||(39849015-39849057)
chr3 (1-43)||(42412896-42412938)
chr3 (1-43)||(54261169-54261211)
chr3 (1-46)||(30767369-30767414)
chr3 (1-45)||(11687231-11687275)
chr3 (1-40)||(6462358-6462397)
chr3 (545-584)||(22754766-22754805)
chr3 (1-44)||(29127861-29127904)
chr3 (1-44)||(35315898-35315941)
chr3 (1-44)||(40944825-40944868)
chr3 (1-44)||(45877396-45877439)
chr3 (422-488)||(49304090-49304157)
chr3 (545-584)||(51171088-51171127)
chr3 (2-45)||(51683077-51683120)
chr3 (1-43)||(15320129-15320171)
chr3 (1-43)||(29135856-29135898)
chr3 (1-43)||(32873670-32873712)
chr3 (1-43)||(46529992-46530034)
chr3 (1-43)||(47471775-47471817)
chr3 (1-46)||(7310825-7310870)
chr3 (545-590)||(18360109-18360153)
chr3 (1-38)||(33560808-33560845)
chr3 (3-44)||(41630636-41630677)
[»] scaffold0012 (1 HSPs)
scaffold0012 (541-622)||(36150-36231)
[»] chr2 (32 HSPs)
chr2 (562-621)||(33710901-33710960)
chr2 (545-630)||(3816281-3816366)
chr2 (573-622)||(26129434-26129483)
chr2 (1-45)||(7747215-7747259)
chr2 (1-44)||(8410073-8410116)
chr2 (1-44)||(20612657-20612700)
chr2 (1-43)||(18902651-18902693)
chr2 (1-46)||(21180435-21180480)
chr2 (1-44)||(2550810-2550853)
chr2 (1-44)||(10026737-10026780)
chr2 (1-44)||(10046597-10046640)
chr2 (1-44)||(22593077-22593120)
chr2 (1-44)||(38005344-38005387)
chr2 (1-44)||(42770772-42770815)
chr2 (1-44)||(44945536-44945579)
chr2 (574-620)||(19004816-19004862)
chr2 (1-43)||(41032026-41032068)
chr2 (574-622)||(42807473-42807521)
chr2 (1-44)||(331443-331486)
chr2 (541-584)||(11805021-11805064)
chr2 (2-45)||(23500803-23500846)
chr2 (545-584)||(24582538-24582577)
chr2 (640-731)||(37058121-37058212)
chr2 (511-542)||(42882548-42882579)
chr2 (1-43)||(3644008-3644050)
chr2 (1-43)||(37805012-37805054)
chr2 (1-43)||(39201629-39201671)
chr2 (2-43)||(12864167-12864208)
chr2 (1-46)||(14853488-14853533)
chr2 (549-586)||(24582477-24582514)
chr2 (448-489)||(29110347-29110388)
chr2 (593-630)||(42882548-42882585)
[»] chr8 (33 HSPs)
chr8 (545-630)||(7130130-7130215)
chr8 (542-628)||(39872150-39872236)
chr8 (513-586)||(13461190-13461271)
chr8 (549-621)||(45156344-45156416)
chr8 (558-621)||(1797748-1797811)
chr8 (1-43)||(2467239-2467281)
chr8 (1-43)||(24837189-24837231)
chr8 (1-43)||(38922535-38922577)
chr8 (1-46)||(14666192-14666237)
chr8 (1-44)||(44893399-44893442)
chr8 (574-628)||(13461190-13461244)
chr8 (1-39)||(17981392-17981430)
chr8 (1-46)||(1013098-1013143)
chr8 (1-46)||(8141046-8141091)
chr8 (2-43)||(13358969-13359010)
chr8 (545-610)||(15892151-15892216)
chr8 (1-45)||(10927551-10927595)
chr8 (1-45)||(22810025-22810069)
chr8 (1-45)||(34846759-34846803)
chr8 (571-627)||(45156018-45156074)
chr8 (1-44)||(6100418-6100461)
chr8 (1-44)||(7673775-7673817)
chr8 (1-44)||(24938683-24938726)
chr8 (545-628)||(42432014-42432097)
chr8 (574-628)||(7130616-7130670)
chr8 (1-43)||(10535524-10535566)
chr8 (1-43)||(15884676-15884718)
chr8 (1-43)||(17845680-17845722)
chr8 (780-842)||(28812776-28812838)
chr8 (434-500)||(42183570-42183636)
chr8 (1-43)||(45521116-45521158)
chr8 (2-43)||(16893884-16893925)
chr8 (539-568)||(32077009-32077038)
[»] scaffold0027 (2 HSPs)
scaffold0027 (553-622)||(49226-49295)
scaffold0027 (640-719)||(49121-49200)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-43)||(8831-8873)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-43)||(250134-250176)
scaffold0005 (1-43)||(271195-271237)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-43)||(516-558)
scaffold0002 (1-44)||(412147-412190)
[»] scaffold1107 (1 HSPs)
scaffold1107 (573-629)||(1920-1976)
[»] scaffold0029 (1 HSPs)
scaffold0029 (3-43)||(40990-41030)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-43)||(68463-68505)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-46)||(5916-5961)
[»] scaffold0254 (1 HSPs)
scaffold0254 (545-590)||(23244-23288)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-46)||(25905-25950)
[»] scaffold0007 (1 HSPs)
scaffold0007 (575-612)||(232390-232427)


Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-134; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 43 - 407
Target Start/End: Complemental strand, 41655949 - 41655580
Alignment:
Q  43 taatcattttagttgttgcaacaaaacactaaacaactgatattttgcttctagtttcaaatccatgccatgaatgcactgaatcgcggaaccattaaca 142  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  41655949 taatcattttggttgttgcaacaaaacactaaacaactgatattttgcttctagtttcaaatccatgccatgaatgcatcgaaccgcggaaccattaaca 41655850  T
Q  143 ccaaacttcatcttctactacccgctgatccagtttgtggccttcctttaacatcagtttcctgctcacatgagnnnnnnnngttactcctagacagtac 242  Q
    |||||||||||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |||||||||||||||        |||||||||| || |||     
T  41655849 ccaaacttcatcttctaccacccgttgatgcagtttgtgaccttcctttaacgtcagtgtcctgctcacatgag-aaaaacagttactcctaaactgtat 41655751  T
Q  243 ggctttttcaatcagaaaaatagaaaggaaactatacaagaataaacttgacggttcaatttattatgataaataaagacaagtgaaaactaggggcagg 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41655750 ggctttttcaatcagaaaaatagaaaggaaactatacaagaataaactcgaccgttcaatttattatgataaataaagacaagtgaaaactaagggcagg 41655651  T
Q  343 g------accctcttaaaaatctaataaaagcagacatatcattgttcttaattaatcaagatacaccaaa 407  Q
    |      ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  41655650 gaggataaccctcttaaaaatctaataaaagcaggcatatcattgttcctaattaattaagatacaccaaa 41655580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 545 - 630
Target Start/End: Complemental strand, 11434830 - 11434745
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtcaa 630  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||| ||||||||    
T  11434830 tgagctaactcaggcatgtgttaattccagcgtgagttaactcacgcagtgtgacttaagtcaggcatgtgtaaaaactaagtcaa 11434745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 545 - 631
Target Start/End: Complemental strand, 32713286 - 32713200
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtcaaa 631  Q
    |||||||||||||||| |||||||||| |||||||||||||| |||| ||||||||||||||| | |||||| |||| ||| |||||    
T  32713286 tgagttaactcacgcaagtgttaattttagcgtgagttaactcacgcagcgtgacttaagtcacgtatgtgttaaaactaaatcaaa 32713200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 756 - 842
Target Start/End: Complemental strand, 41655449 - 41655369
Alignment:
Q  756 catgcacaattgtacctgtggtaatggtatgtgcaaataaatgtagttatttgcagcagttgaattgtgattttctgcacctttgct 842  Q
    |||||||||||||||||||||||      ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||    
T  41655449 catgcacaattgtacctgtggta------tgtgcaaataaatgtagttctttgcagtagttggattgtgagtttctgcacctttgct 41655369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11398010 - 11398052
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  11398010 cttggaaggagctccttgccactggagcccaagcaacttggtt 11398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5855508 - 5855463
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  5855508 cttggaaggagctccttgccactggagcccaaacaacttggttaat 5855463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 622
Target Start/End: Original strand, 7013655 - 7013732
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    |||||||| ||||||| ||||||||| |  |||||||||||||| ||| ||||| |||||| | ||||||||||||||    
T  7013655 tgagttaattcacgcaggtgttaattcctacgtgagttaacttatgcgacgtgatttaagttacgcatgtgtaaaaaa 7013732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 19062891 - 19062935
Alignment:
Q  542 gcatgagttaactcacgcatgtgttaatttcagcgtgagttaact 586  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  19062891 gcatgagttaattcacgcaagtgttaatttcagcgtgagttaact 19062935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 2981055 - 2981098
Alignment:
Q  3 tggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  2981055 tggaaggagctccttgccactagagcccaagcaacttggttaat 2981098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 10422773 - 10422730
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||    
T  10422773 ttggaaggagctccttgccactgtagcccaaacaacttggttaa 10422730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 545 - 584
Target Start/End: Complemental strand, 32306452 - 32306413
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaa 584  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  32306452 tgagttaactcacgcaagtgttaatttcagcgtgagttaa 32306413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 434 - 489
Target Start/End: Original strand, 45886883 - 45886938
Alignment:
Q  434 gcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaact 489  Q
    ||||||||||||  |||||||||| ||||||||||||  |||||||||||||||||    
T  45886883 gcacaaaacactcgcgccctgcagacatttcgaaaatacccctgcgctagttaact 45886938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8763977 - 8763935
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  8763977 cttggaaggagctccttgccacgggagcccaagcaacttggtt 8763935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15238228 - 15238270
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  15238228 cttggaaggagctccttgccattggagcccaagcaacttggtt 15238270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25165388 - 25165346
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  25165388 cttggaaggagctccttgccactagagcccaagcaacttggtt 25165346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 591
Target Start/End: Complemental strand, 33296616 - 33296570
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgc 591  Q
    ||||||||||||||||||||||||| || ||||||||||||| ||||    
T  33296616 tgagttaactcacgcatgtgttaatgtctgcgtgagttaactaacgc 33296570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41743259 - 41743217
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  41743259 cttggaaggagctccttgccaccggagcccaagcaacttggtt 41743217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 49078096 - 49078058
Alignment:
Q  5 gaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  49078096 gaaggagctccttgccactggagcccaagcaacttggtt 49078058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 586
Target Start/End: Complemental strand, 7013298 - 7013261
Alignment:
Q  549 ttaactcacgcatgtgttaatttcagcgtgagttaact 586  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7013298 ttaactcacgcatgtgttaatttctgcgtgagttaact 7013261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18915853 - 18915808
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||    
T  18915853 cttggaagaagctccttgccactgaagcccaaacaacttggttaat 18915808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 586
Target Start/End: Original strand, 21258321 - 21258362
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaact 586  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  21258321 tgagttaactcacgcaagtgttaattccagcgtgagttaact 21258362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 33418238 - 33418279
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  33418238 ttggaaggagctccttgccactggagcccaaacaacttggtt 33418279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32151044 - 32151087
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||    
T  32151044 cttggaaggagctccttgccactggagcccaaacaactttgtta 32151087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40288599 - 40288642
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||| |||||||||||||||  |||||||||||||||||||    
T  40288599 cttggaaagagctccttgccactcgagcccaagcaacttggtta 40288642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9853399 - 9853440
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  9853399 cttggaaggagctccttgccactggagcccaa-caacttggtt 9853440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26325798 - 26325756
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||    
T  26325798 cttgaaaggagctccttgccactggagccctagcaacttggtt 26325756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34877976 - 34877934
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||    
T  34877976 cttggaaggtgctccttgccactgaagcccaaacaacttggtt 34877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40226364 - 40226406
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| | ||||| ||||||||||    
T  40226364 cttggaaggagctccttgccactgaaacccaatcaacttggtt 40226406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 48798193 - 48798235
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||||||||||||||||| ||||| | |||||||||||    
T  48798193 ttggaaggagctccttgccactggagccccaacaacttggtta 48798235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 7013223 - 7013158
Alignment:
Q  640 acacttgcgttaattaattagcacatgggcattttcggaatggctgtaggacgcaagtgttttgtg 705  Q
    |||||||||||| |||| |||| |||| | |||||||||||| ||| |||  ||||||||||||||    
T  7013223 acacttgcgttagttaactagcgcatgagtattttcggaatgcctgcagggtgcaagtgttttgtg 7013158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 7013158 - 7013223
Alignment:
Q  435 cacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    |||||||||||| | |||||||| |||| |||||||   | |||||||||||||| ||||||||||    
T  7013158 cacaaaacacttgcaccctgcaggcattccgaaaatactcatgcgctagttaactaacgcaagtgt 7013223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 627
Target Start/End: Original strand, 37920147 - 37920200
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagt 627  Q
    ||||||||||||| |||  |||||| |||||||| ||||||||||||| |||||    
T  37920147 gcgtgagttaactcacgttgcgtgatttaagtcacgcatgtgtaaaaactaagt 37920200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 41663982 - 41664019
Alignment:
Q  5 gaaggagctccttgccactgcagcccaagcaacttggt 42  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  41663982 gaaggagctccttgccactggagcccaaacaacttggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42744773 - 42744732
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggt 42  Q
    |||||||||||||| ||||||||| || ||||||||||||||    
T  42744773 cttggaaggagctcattgccactggagtccaagcaacttggt 42744732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 607
Target Start/End: Original strand, 45797591 - 45797656
Alignment:
Q  542 gcatgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtca 607  Q
    ||||||||||| ||||| |||||||||  ||| ||||| |||||  |||| |||||||||||||||    
T  45797591 gcatgagttaagtcacgtatgtgttaaactcaacgtgacttaacacacgcagcgtgacttaagtca 45797656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 46929860 - 46929901
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||| |||||||||  ||||||||||||||||||    
T  46929860 ttggaaggagcttcttgccactagagcccaagcaacttggtt 46929901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 586
Target Start/End: Original strand, 49000701 - 49000742
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaact 586  Q
    |||||||||||||||||||| |||| || |||||||||||||    
T  49000701 tgagttaactcacgcatgtgctaatgtctgcgtgagttaact 49000742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 4e-31; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 545 - 725
Target Start/End: Complemental strand, 30859933 - 30859752
Alignment:
Q  545 tgagttaactcacgcatgtgttaattt-cagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtcaaannnnnnnnacac 643  Q
    |||||||||||| ||| |||||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||           ||||    
T  30859933 tgagttaactcatgcaggtgttaattttcggtgtgagttaactcacgcggcgtgacttaagtcatgcatgtgtaaaaactaagtcccgttttttttacac 30859834  T
Q  644 ttgcgttaattaattagcacatgggcattttcggaatggctgtaggacgcaagtgttttgtggagggggaagagcaaaaatc 725  Q
    |||||||| |||| | || || ||||||||| |||||||||| ||| ||| ||||||||||| ||||||||||||| |||||    
T  30859833 ttgcgttagttaacttgcgcaggggcatttttggaatggctgcagggcgcgagtgttttgtgcagggggaagagcagaaatc 30859752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 30859752 - 30859837
Alignment:
Q  416 gatttatgctcttccct-tgcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    ||||| ||||||||||  |||||||||||||  ||||||||||||||| | |||||| |||||||| |||||||| ||||||||||    
T  30859752 gatttctgctcttccccctgcacaaaacactcgcgccctgcagccattccaaaaatgcccctgcgcaagttaactaacgcaagtgt 30859837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48804671 - 48804628
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  48804671 cttggaaggagctccttgccactggagcccaagcaacttggtta 48804628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19914823 - 19914865
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  19914823 cttggaaggagctccttgccactggagcccaagcaacttggtt 19914865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43925500 - 43925458
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  43925500 cttggaaggagctccttgccactggagcccaagcaacttggtt 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1797448 - 1797404
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  1797448 cttggaaggagctccttgccactggagcccaagcaacttgattaa 1797404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 628
Target Start/End: Original strand, 16488152 - 16488232
Alignment:
Q  548 gttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtc 628  Q
    |||||||||||||||||||||   | |||||| |||||| | || |||||||||||||||  |||||||||||| ||||||    
T  16488152 gttaactcacgcatgtgttaacacctgcgtgaattaactcatgcagcgtgacttaagtcacacatgtgtaaaaactaagtc 16488232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47341864 - 47341820
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  47341864 cttggaatgagctccttgccactggagcccaagcaacttggttaa 47341820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4195323 - 4195365
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  4195323 cttggcaggagctccttgccactggagcccaagcaacttggtt 4195365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 640 - 726
Target Start/End: Complemental strand, 13798582 - 13798496
Alignment:
Q  640 acacttgcgttaattaattagcacatgggcattttcggaatggctgtaggacgcaagtgttttgtggagggggaagagcaaaaatca 726  Q
    |||||||||||| |||| |||| ||  | |||||| |||||||||| ||| ||| |||||||||||  |||||||||||| ||||||    
T  13798582 acacttgcgttacttaactagcgcagagacattttgggaatggctgcagggcgcgagtgttttgtgctgggggaagagcagaaatca 13798496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 434 - 500
Target Start/End: Original strand, 13798516 - 13798582
Alignment:
Q  434 gcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    ||||||||||||  ||||||||||||||| | |||||| | ||||||||||||| | ||||||||||    
T  13798516 gcacaaaacactcgcgccctgcagccattcccaaaatgtctctgcgctagttaagtaacgcaagtgt 13798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21530736 - 21530694
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  21530736 cttggaaggagctccttgccactggagccgaagcaacttggtt 21530694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22993488 - 22993530
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  22993488 cttggaaggagctccttgccactggagtccaagcaacttggtt 22993530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 640 - 726
Target Start/End: Complemental strand, 31877444 - 31877359
Alignment:
Q  640 acacttgcgttaattaattagcacatgggcattttcggaatggctgtaggacgcaagtgttttgtggagggggaagagcaaaaatca 726  Q
    |||||||||||| ||||||| |||| || |||||| || || |||||||||||| |||||||||||  ||||| |||||| ||||||    
T  31877444 acacttgcgttagttaattaacacagggacatttttggcatagctgtaggacgcgagtgttttgtgctggggg-agagcagaaatca 31877359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 620
Target Start/End: Original strand, 42629201 - 42629247
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaa 620  Q
    ||||||||||||| | || ||||||||||||||||||||||||||||    
T  42629201 gcgtgagttaactcatgcagcgtgacttaagtcatgcatgtgtaaaa 42629247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 5039541 - 5039581
Alignment:
Q  3 tggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  5039541 tggaaggagctccttgccactggagcccaaacaacttggtt 5039581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8734807 - 8734851
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||    
T  8734807 cttggaaggagctccttgccactgacgcccaaacaacttggttaa 8734851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10047997 - 10048041
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||    
T  10047997 cttggaaggagctccttgccactggagttcaagcaacttggttaa 10048041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 39420826 - 39420782
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||    
T  39420826 cttgaaaggagctccttgccactagagcccaagcaacttggttaa 39420782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 11607119 - 11607080
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttg 40  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  11607119 cttggaaggagttccttgccactggagcccaagcaacttg 11607080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18785657 - 18785614
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||    
T  18785657 cttggaaggagcttcttgccactggagcccatgcaacttggtta 18785614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 584
Target Start/End: Original strand, 23284776 - 23284815
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaa 584  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  23284776 tgagttaactcacgcaggtgttaattccagcgtgagttaa 23284815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27875208 - 27875251
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||    
T  27875208 cttggaaggagctacttgccactggagcccaaacaacttggtta 27875251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45447958 - 45447915
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  45447958 cttggaaggagctccttgccactagaacccaagcaacttggtta 45447915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4228872 - 4228914
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||    
T  4228872 cttggaaggagctccttgccgctggagcccaaacaacttggtt 4228914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13095846 - 13095804
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||| ||||||||||||||||| | ||||||||||||||||||    
T  13095846 cttgaaaggagctccttgccacgggagcccaagcaacttggtt 13095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16802111 - 16802069
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||| ||||||||| |||||| |||||||||||    
T  16802111 cttggaaggagctcattgccactggagcccaggcaacttggtt 16802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22268150 - 22268192
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  22268150 cttggaatgagctccttgccactggagcccaaacaacttggtt 22268192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34127741 - 34127783
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||| ||||||||| || ||||||||||||||||||    
T  34127741 cttggaaggagttccttgccattggagcccaagcaacttggtt 34127783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 34659212 - 34659174
Alignment:
Q  3 tggaaggagctccttgccactgcagcccaagcaacttgg 41  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  34659212 tggaaggagctccttgccactggagcccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 591
Target Start/End: Original strand, 38458269 - 38458315
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgc 591  Q
    |||||||||||||||||||| |||| || ||||||||||||| ||||    
T  38458269 tgagttaactcacgcatgtgctaatgtctgcgtgagttaactcacgc 38458315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 43346901 - 43346947
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggttaatca 48  Q
    ||||||||||||||||||||||| || |||| |||||||||| ||||    
T  43346901 ttggaaggagctccttgccactggagtccaaacaacttggttgatca 43346947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42210383 - 42210428
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    ||||||| |||||||||||||||| || | ||||||||||||||||    
T  42210383 cttggaaagagctccttgccactggagtctaagcaacttggttaat 42210428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 545 - 622
Target Start/End: Complemental strand, 32879775 - 32879698
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||    
T  32879775 tgagttaactcacgcatgtgttaatttcagcgtgagttaactcacgcagcgtgacttaagtcacgcaagtgtaaaaaa 32879698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 545 - 619
Target Start/End: Original strand, 26622234 - 26622308
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaa 619  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| || ||| ||| ||||  ||||||||||    
T  26622234 tgagttaactcacgcaggtgttaatttcagcgcgagttaacttacgcagcatgatttatgtcacacatgtgtaaa 26622308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 545 - 619
Target Start/End: Original strand, 26728212 - 26728286
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaa 619  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| || ||| ||| ||||  ||||||||||    
T  26728212 tgagttaactcacgcaggtgttaatttcagcgcgagttaacttacgcagcatgatttatgtcacacatgtgtaaa 26728286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21898637 - 21898594
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  21898637 cttggaaggagctccttgccactggagcccaagcaacttggtta 21898594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2271422 - 2271464
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  2271422 cttggaaggagctccttgccactggagcccaagcaacttggtt 2271464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 21016874 - 21016916
Alignment:
Q  3 tggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  21016874 tggaaggagctccttgccactggagcccaagcaacttggttaa 21016916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13036125 - 13036164
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttg 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  13036125 cttggaaggagctccttgccactggagcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 573 - 620
Target Start/End: Complemental strand, 31778884 - 31778837
Alignment:
Q  573 agcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaa 620  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||||    
T  31778884 agcgtgagttaactcatgcggcgtgacttaagtcacgcatgtgtaaaa 31778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5253344 - 5253386
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  5253344 cttggaaggagctccttgccattggagcccaagcaacttggtt 5253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5759617 - 5759575
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  5759617 cttggaaggagttccttgccactggagcccaagcaacttggtt 5759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6606218 - 6606260
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  6606218 cttggaaggagctccttgccactgtggcccaagcaacttggtt 6606260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15643949 - 15643991
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  15643949 cttggaatgagctccttgccactggagcccaagcaacttggtt 15643991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19230678 - 19230720
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  19230678 cttggaaggagctccttgccactggagcccaaacaacttggtt 19230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24671987 - 24672029
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  24671987 cttgaaaggagctccttgccactggagcccaagcaacttggtt 24672029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 14107480 - 14107521
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  14107480 ttggaaggagctccttgccactggagcccaaacaacttggtt 14107521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13468922 - 13468878
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||||||||||||   ||||||||||||||||||||    
T  13468922 cttggaaggagctccttgccaccagagcccaagcaacttggttaa 13468878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17115018 - 17115062
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||    
T  17115018 cttggaaggagcttcttgccactggagcccaagcaatttggttaa 17115062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3030739 - 3030782
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||    
T  3030739 cttggaatgagctccttgccactggagcccaaacaacttggtta 3030782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 29444887 - 29444930
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||||||||||||  |||||||| |||||||||||    
T  29444887 ttggaaggagctccttgccactagagcccaagtaacttggttaa 29444930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 574 - 620
Target Start/End: Complemental strand, 1860432 - 1860386
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaa 620  Q
    ||||||||||||||| |  ||||||||||||||| ||||||||||||    
T  1860432 gcgtgagttaacttatgttgcgtgacttaagtcacgcatgtgtaaaa 1860386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8612095 - 8612137
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| || |||| ||||||||||    
T  8612095 cttggaaggagctccttgccactggagtccaaacaacttggtt 8612137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 8938699 - 8938657
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||    
T  8938699 ttggaaggagctccttgtcactggagcccaaacaacttggtta 8938657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9179857 - 9179899
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  9179857 cttggaatgagctccttgccactggagcccaaacaacttggtt 9179899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10311590 - 10311632
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||||| |||| |||||||||||| |||||    
T  10311590 cttggaaggagctccttgctactggagcccaagcaacatggtt 10311632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 590
Target Start/End: Original strand, 2146783 - 2146827
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacg 590  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  2146783 tgagtgaactcacgcatgtgt-aatttcaacgtgagttaacttacg 2146827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 6e-24; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 545 - 622
Target Start/End: Complemental strand, 25994629 - 25994552
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    |||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  25994629 tgagttaactcacgcaggtgttaatttctgcgtgagttaactcaggcggcgtgacttaagtcacgcatgtgtaaaaaa 25994552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 545 - 629
Target Start/End: Original strand, 14410737 - 14410821
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtca 629  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||||||||  |||||||||||| |||||||    
T  14410737 tgagttaactcacgcacgtgttaatttcagcatgagttaactcacgcagcgtgacttaagtcacacatgtgtaaaaactaagtca 14410821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 545 - 630
Target Start/End: Original strand, 17854695 - 17854780
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtcaa 630  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||| | ||||| ||||||| ||||||||||||| ||| ||||    
T  17854695 tgagttaactcacacaagtgttaatttcagcgtgagttaactcacgcagtgtgacctaagtcacgcatgtgtaaaaactaactcaa 17854780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 545 - 622
Target Start/End: Original strand, 25994914 - 25994991
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    |||||||||||||||| |||||||||   ||||||||||||| | || ||||||||||||||| ||||||||||||||    
T  25994914 tgagttaactcacgcaagtgttaattctcgcgtgagttaactcatgcagcgtgacttaagtcacgcatgtgtaaaaaa 25994991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6767172 - 6767217
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  6767172 cttggaaggagctccttgccactggagcccaagcaacttggttaat 6767217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 622
Target Start/End: Complemental strand, 26092656 - 26092579
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    ||||||||||| |||| ||||||||||| ||||||||||||| | ||| | |||||||||||| ||| ||||||||||    
T  26092656 tgagttaactctcgcaggtgttaatttctgcgtgagttaactcatgcgacatgacttaagtcacgcaagtgtaaaaaa 26092579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28856963 - 28856920
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  28856963 cttggaaggagctccttgccactggagcccaagcaacttggtta 28856920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5732041 - 5732083
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  5732041 cttggaaggagctccttgccactggagcccaagcaacttggtt 5732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19572710 - 19572668
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  19572710 cttggaaggagctccttgccactggagcccaagcaacttggtt 19572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28857114 - 28857072
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  28857114 cttggaaggagctccttgccactggagcccaagcaacttggtt 28857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 574 - 623
Target Start/End: Original strand, 32804888 - 32804937
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaat 623  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  32804888 gcgtgagttaactcacgcggcgtgacttaagtcacacatgtgtaaaaaat 32804937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42086313 - 42086269
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||| | ||||||||||||||||||||    
T  42086313 cttggaaggagctccttgccaccggagcccaagcaacttggttaa 42086269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 574 - 629
Target Start/End: Complemental strand, 14410292 - 14410237
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtca 629  Q
    ||||||||||||| |||| ||||||||||||||| |||||| |||||| |||||||    
T  14410292 gcgtgagttaactcacgcagcgtgacttaagtcacgcatgtataaaaactaagtca 14410237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 18136402 - 18136445
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||    
T  18136402 ttggaaggagctccttgccactggagcccaaacaacttggttaa 18136445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 574 - 621
Target Start/End: Original strand, 25868504 - 25868551
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaa 621  Q
    ||||||||||||||| || ||||||||||||||| |||||||||||||    
T  25868504 gcgtgagttaacttatgcagcgtgacttaagtcacgcatgtgtaaaaa 25868551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7866567 - 7866525
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  7866567 cttggaaggagctccttgccactggagtccaagcaacttggtt 7866525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 591
Target Start/End: Complemental strand, 20419590 - 20419544
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgc 591  Q
    |||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  20419590 tgagttaactcacgcaagtgttaattccagcgtgagttaactcacgc 20419544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20525824 - 20525782
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  20525824 cttgaaaggagctccttgccactggagcccaagcaacttggtt 20525782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23383634 - 23383592
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  23383634 cttggaaggagctccttgccactggagcccaaacaacttggtt 23383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 500
Target Start/End: Original strand, 26092490 - 26092552
Alignment:
Q  438 aaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    ||||||||  |||||||||| ||||||||||||  || |||||||||||||| ||||||||||    
T  26092490 aaaacactcgcgccctgcaggcatttcgaaaatacccttgcgctagttaactaacgcaagtgt 26092552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41163580 - 41163622
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  41163580 cttggaaggagctccttgccactggagcccaaacaacttggtt 41163622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 628
Target Start/End: Complemental strand, 25868189 - 25868108
Alignment:
Q  547 agttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtc 628  Q
    |||||||||||||| |||||||     ||||||||||||| | || |||||||||||||||  |||||||||||| ||||||    
T  25868189 agttaactcacgcacgtgttaacacatgcgtgagttaactcatgcagcgtgacttaagtcacacatgtgtaaaaactaagtc 25868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 26093012 - 26093085
Alignment:
Q  549 ttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    |||||||||||| ||||||||| | |||| |||||| | |  |||||||||||||||||  |||||||||||||    
T  26093012 ttaactcacgcacgtgttaattcctgcgtaagttaattcatacggcgtgacttaagtcacacatgtgtaaaaaa 26093085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 37263223 - 37263182
Alignment:
Q  5 gaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  37263223 gaaggaactccttgccactggagcccaagcaacttggttaat 37263182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 1538414 - 1538374
Alignment:
Q  4 ggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  1538414 ggaaggagctccttgccactggagcccaaacaacttggtta 1538374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35403633 - 35403677
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||    
T  35403633 cttggaaggagctccttgccactggagcccaaacaagttggttaa 35403677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 35561940 - 35561984
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||    
T  35561940 ttggaaggagctctttgccactggagtccaagcaacttggttaat 35561984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8513505 - 8513463
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||  || |||||||||||||||    
T  8513505 cttggaaggagctccttgccacttgagtccaagcaacttggtt 8513463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9812858 - 9812816
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| || |||| ||||||||||    
T  9812858 cttggaaggagctccttgccactggagtccaaacaacttggtt 9812816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12705000 - 12704958
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| || |||| ||||||||||    
T  12705000 cttggaaggagctccttgccactggagtccaaacaacttggtt 12704958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 16755046 - 16755004
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||| |||||||||||||||| |||||||| ||||||||||    
T  16755046 ttggaaagagctccttgccactgaagcccaaggaacttggtta 16755004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30349565 - 30349523
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||    
T  30349565 cttggaaggaactccttgccactggagcccaaacaacttggtt 30349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39728373 - 39728331
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  39728373 cttggaaagagctccttgccactggagcccaaacaacttggtt 39728331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 620
Target Start/End: Original strand, 7732848 - 7732893
Alignment:
Q  575 cgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaa 620  Q
    |||||||||||| | | |||||||||||||||| ||||||||||||    
T  7732848 cgtgagttaactcatgtggcgtgacttaagtcacgcatgtgtaaaa 7732893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25417304 - 25417348
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||    
T  25417304 cttggaaggagctccttgccactggagcccaa-aaacttggttaat 25417348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 586
Target Start/End: Original strand, 32303662 - 32303702
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaact 586  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  32303662 tgagttaactcacgcatgtg-tattttcagcgtgagttaact 32303702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 4e-22; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 545 - 623
Target Start/End: Original strand, 32304747 - 32304825
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaat 623  Q
    ||||||||||||| |||||||||||||||||||||||||||| || | || |||||||||||| |||||||||||||||    
T  32304747 tgagttaactcacacatgtgttaatttcagcgtgagttaactcacccagcatgacttaagtcacgcatgtgtaaaaaat 32304825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 545 - 725
Target Start/End: Original strand, 36153939 - 36154117
Alignment:
Q  545 tgagttaactcacgcatgtgttaattt-cagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtcaaannnnnnnnacac 643  Q
    |||||||||||||||| |||||||||| | |||||| |||||| ||||||||| |||||||||| ||||||||||||  |||||            ||||    
T  36153939 tgagttaactcacgcaggtgttaattttcggcgtgacttaactcacgcggcgtaacttaagtcacgcatgtgtaaaatctaagt--ttcgttttttacac 36154036  T
Q  644 ttgcgttaattaattagcacatgggcattttcggaatggctgtaggacgcaagtgttttgtggagggggaagagcaaaaatc 725  Q
    ||||||||| ||| |||| ||||||||||||||||||||||| |||  |||||||||||||  | ||||||||||| |||||    
T  36154037 ttgcgttaaataactagcgcatgggcattttcggaatggctgcagggtgcaagtgttttgtata-ggggaagagcagaaatc 36154117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 545 - 621
Target Start/End: Original strand, 53260184 - 53260260
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaa 621  Q
    |||||| ||||||||||||||||||||| ||||| ||||||| |||| ||||||||||||||| | |||||||||||    
T  53260184 tgagttgactcacgcatgtgttaatttcggcgtgggttaactcacgcagcgtgacttaagtcacgtatgtgtaaaaa 53260260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 545 - 622
Target Start/End: Complemental strand, 32303991 - 32303914
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    ||||||||||||| |||||||||||| | ||||||||||||| | ||| |||||||||||||| | ||||||||||||    
T  32303991 tgagttaactcacacatgtgttaattcctgcgtgagttaactcatgcgacgtgacttaagtcacgtatgtgtaaaaaa 32303914  T

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Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 545 - 629
Target Start/End: Complemental strand, 19487602 - 19487518
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtca 629  Q
    ||||||||||||||||  |||| |||| ||| |||||||||| |||| |||||| |||||||| ||||||||||||| |||||||    
T  19487602 tgagttaactcacgcagatgtttattttagcatgagttaactcacgcagcgtgagttaagtcacgcatgtgtaaaaactaagtca 19487518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 623
Target Start/End: Original strand, 11660950 - 11661011
Alignment:
Q  562 gtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaat 623  Q
    ||||||||||||||||||||||||| || | ||||||||||||||| ||| |||||||||||    
T  11660950 gtgttaatttcagcgtgagttaactcacacagcgtgacttaagtcacgcaagtgtaaaaaat 11661011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29895777 - 29895732
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  29895777 cttggaaggagctccttgccactggagcccaagcaacttggttaat 29895732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1446816 - 1446773
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  1446816 cttggaaggagctccttgccactggagcccaagcaacttggtta 1446773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 573 - 628
Target Start/End: Original strand, 40361676 - 40361731
Alignment:
Q  573 agcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtc 628  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||||| ||||||    
T  40361676 agcgtgagttaactcacgtggcgtgacttaagtcacgcatgtgtaaaaattaagtc 40361731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3574567 - 3574609
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  3574567 cttggaaggagctccttgccactggagcccaagcaacttggtt 3574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 500
Target Start/End: Complemental strand, 36154119 - 36154033
Alignment:
Q  414 aagatttatgctcttcccttgcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    ||||||| |||||||||| |  ||||||||||| | ||||||||||||| |||||||| || |||||||||||  | ||||||||||    
T  36154119 aagatttctgctcttcccctatacaaaacacttgcaccctgcagccattccgaaaatgcccatgcgctagttatttaacgcaagtgt 36154033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 55921024 - 55920982
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  55921024 cttggaaggagctccttgccactggagcccaagcaacttggtt 55920982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 628
Target Start/End: Complemental strand, 36153537 - 36153453
Alignment:
Q  545 tgagttaactcacgcatgtgttaattt-cagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtc 628  Q
    |||||||||||| |||||||||||||| | |  |||||||||| | | | ||| |||||||||||||||||||||||| ||||||    
T  36153537 tgagttaactcatgcatgtgttaattttcggtatgagttaactcatgtgacgtaacttaagtcatgcatgtgtaaaaattaagtc 36153453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41163003 - 41163047
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||    
T  41163003 cttggaaggagctccttgtcactggagcccaagcaacttggttaa 41163047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6032761 - 6032800
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttg 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  6032761 cttggaaggagctccttgccactggagcccaagcaacttg 6032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24166440 - 24166397
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  24166440 cttggaaggagctccttgccactggagcccaatcaacttggtta 24166397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27248418 - 27248375
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||| ||||||||| |||||||||||||||||||    
T  27248418 cttggaaggagctcgttgccactggagcccaagcaacttggtta 27248375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14567241 - 14567199
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  14567241 cttggaatgagctccttgccactggagcccaagcaacttggtt 14567199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27531778 - 27531820
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  27531778 cttggaaggagctccttgccactggagtccaagcaacttggtt 27531820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 628
Target Start/End: Original strand, 40277091 - 40277145
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtc 628  Q
    |||||| |||||| ||||||||||||||||| ||| |||||||||||| ||||||    
T  40277091 gcgtgacttaactcacgcggcgtgacttaaggcattcatgtgtaaaaactaagtc 40277145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47078448 - 47078406
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  47078448 cttggaaggagctccttgccactggaacccaagcaacttggtt 47078406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7000514 - 7000470
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  7000514 cttggaaggagcttcttgccactgtagcccaaacaacttggttaa 7000470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 448 - 500
Target Start/End: Complemental strand, 14331730 - 14331678
Alignment:
Q  448 cgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    |||||||||  ||||||||||||| |||||||||||||||||  |||||||||    
T  14331730 cgccctgcaagcatttcgaaaatgcccctgcgctagttaactagcgcaagtgt 14331678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19651566 - 19651610
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||    
T  19651566 cttggaaggagctcattgccactggagcccaaacaacttggttaa 19651610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26480070 - 26480114
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||    
T  26480070 cttggaaggagctccttgccagtggagcccaaacaacttggttaa 26480114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41339516 - 41339560
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||    
T  41339516 cttggaaggagctccttgccactagagcccaaacaacttggttaa 41339560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52950072 - 52950028
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||    
T  52950072 cttggaaggagctccttgccactagagcccaaacaacttggttaa 52950028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 679 - 722
Target Start/End: Complemental strand, 18886635 - 18886592
Alignment:
Q  679 atggctgtaggacgcaagtgttttgtggagggggaagagcaaaa 722  Q
    |||||||||||| || ||||||||||| ||||||||||||||||    
T  18886635 atggctgtaggatgcgagtgttttgtgcagggggaagagcaaaa 18886592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 719
Target Start/End: Original strand, 20779920 - 20779999
Alignment:
Q  640 acacttgcgttaattaattagcacatgggcattttcggaatggctgtaggacgcaagtgttttgtggagggggaagagca 719  Q
    ||||||||| || |||| |||| ||||||||||||| ||||| ||| ||| ||| |||||||||||  ||| ||||||||    
T  20779920 acacttgcgctagttaactagcgcatgggcattttcagaatgtctgcagggcgcgagtgttttgtgctgggtgaagagca 20779999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 500
Target Start/End: Original strand, 42040390 - 42040476
Alignment:
Q  414 aagatttatgctcttccct-tgcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    ||||||||||||||||||| |||||||||||||  |||||||||| |||  | |||||  ||||||| ||||||||| ||||| ||||    
T  42040390 aagatttatgctcttccctctgcacaaaacactcgcgccctgcag-catgcctaaaatacccctgcgttagttaactaacgcacgtgt 42040476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43458603 - 43458560
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||    
T  43458603 cttggaatgagcttcttgccactggagcccaagcaacttggtta 43458560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 584
Target Start/End: Original strand, 46844626 - 46844665
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaa 584  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  46844626 tgagttaactcacgcaagtgttaatttcaacgtgagttaa 46844665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 53599050 - 53599007
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||||||||||||||| || ||||||| |||||||||||    
T  53599050 cttggaaggagctccttgccaatggagcccaaacaacttggtta 53599007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1940895 - 1940937
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||  ||||||| ||||||||||    
T  1940895 cttggaaggagctccttgccactagagcccaaacaacttggtt 1940937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2559297 - 2559255
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  2559297 cttggaaggagctcgttgccactggagcccaaacaacttggtt 2559255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 591
Target Start/End: Complemental strand, 5314437 - 5314391
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgc 591  Q
    |||||||||||||||| ||||||||| |||||||| |||||| ||||    
T  5314437 tgagttaactcacgcaagtgttaattccagcgtgaattaactcacgc 5314391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6779201 - 6779159
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||    
T  6779201 cttggaagaagctccttgccactggagcccaaacaacttggtt 6779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 547 - 621
Target Start/End: Complemental strand, 11661089 - 11661015
Alignment:
Q  547 agttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaa 621  Q
    |||||||| ||||| |||| || ||  |||| | |||||| |||| ||||||||||||||||||| |||||||||    
T  11661089 agttaactaacgcaagtgtaaaattatgcgttacttaactaacgcagcgtgacttaagtcatgcacgtgtaaaaa 11661015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 12703670 - 12703708
Alignment:
Q  5 gaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  12703670 gaaggatctccttgccactggagcccaagcaacttggtt 12703708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 434 - 500
Target Start/End: Complemental strand, 20779986 - 20779920
Alignment:
Q  434 gcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    ||||||||||||  |||||||||| ||||  ||||||| || ||||||||||||||  |||||||||    
T  20779986 gcacaaaacactcgcgccctgcagacattctgaaaatgcccatgcgctagttaactagcgcaagtgt 20779920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 591
Target Start/End: Complemental strand, 21283924 - 21283878
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgc 591  Q
    |||||||||||||||||||| ||||  | ||||||||||||||||||    
T  21283924 tgagttaactcacgcatgtgctaatggctgcgtgagttaacttacgc 21283878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 591
Target Start/End: Complemental strand, 23811389 - 23811343
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgc 591  Q
    |||| ||||||||||| ||||||||| ||||||||||||||| ||||    
T  23811389 tgagataactcacgcaagtgttaattccagcgtgagttaactcacgc 23811343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33647711 - 33647669
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||| ||||||||||||||||||  ||||||||||||||||||    
T  33647711 cttgaaaggagctccttgccactagagcccaagcaacttggtt 33647669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34667723 - 34667765
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||  ||||||| ||||||||||    
T  34667723 cttggaaggagctccttgccactagagcccaaacaacttggtt 34667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38166017 - 38165975
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||||||| || ||||||| ||||||||||    
T  38166017 cttggaaggagctccttgccagtggagcccaaacaacttggtt 38165975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 579
Target Start/End: Original strand, 10011626 - 10011663
Alignment:
Q  542 gcatgagttaactcacgcatgtgttaatttcagcgtga 579  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10011626 gcatgagttaactcacgcaagtgttgatttcagcgtga 10011663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 579
Target Start/End: Original strand, 10018767 - 10018804
Alignment:
Q  542 gcatgagttaactcacgcatgtgttaatttcagcgtga 579  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10018767 gcatgagttaactcacgcaagtgttgatttcagcgtga 10018804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 541
Target Start/End: Original strand, 19487518 - 19487547
Alignment:
Q  512 tgacttagtttttacacatgcgtgacttaa 541  Q
    ||||||||||||||||||||||||||||||    
T  19487518 tgacttagtttttacacatgcgtgacttaa 19487547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 32303821 - 32303886
Alignment:
Q  435 cacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    |||||||||||  |||||||||| |||| |||||||  |  |||||||||||||| ||||||||||    
T  32303821 cacaaaacactcgcgccctgcaggcattccgaaaataccattgcgctagttaactaacgcaagtgt 32303886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 36153358 - 36153443
Alignment:
Q  416 gatttatgctcttcc-cttgcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    ||||| ||||||||| | ||||||||| |||  |||||| || |||||| ||||||| | ||||||||||||| | ||||||||||    
T  36153358 gatttctgctcttcctcctgcacaaaatactcacgccctacatccattttgaaaatgtctctgcgctagttaagtaacgcaagtgt 36153443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 48317397 - 48317438
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||| |||||| ||||||||| ||||||||||||||||||    
T  48317397 ttggaatgagctctttgccactggagcccaagcaacttggtt 48317438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 6e-21; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 545 - 621
Target Start/End: Original strand, 16280916 - 16280992
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaa 621  Q
    ||||||||||||| || ||||||||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||    
T  16280916 tgagttaactcacccaagtgttaatttcggcgtgagttaactcacgcggcgtgacttaagtcacgcaagtgtaaaaa 16280992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26207923 - 26207969
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaatc 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  26207923 cttggaaggagctccttgccactggagcccaagcaacttggttaatc 26207969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25294945 - 25294900
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  25294945 cttggaaggagctccttgccactggagcccaagcaacttggttaat 25294900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29762277 - 29762319
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  29762277 cttggaaggagctccttgccactggagcccaagcaacttggtt 29762319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 10040538 - 10040497
Alignment:
Q  5 gaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  10040538 gaaggagctccttgccactggagcccaagcaacttggttaat 10040497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10855369 - 10855325
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  10855369 cttggaaggagctccttgccactggagcccaaacaacttggttaa 10855325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48342005 - 48341961
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  48342005 cttggaaggagctccttgccactggagcccaaacaacttggttaa 48341961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13893911 - 13893868
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  13893911 cttggaaggagctccttgccactggagcccaaacaacttggtta 13893868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 431 - 489
Target Start/End: Original strand, 7953376 - 7953434
Alignment:
Q  431 cttgcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaact 489  Q
    |||||||||||||||  |||| |||||||||| |||||||| || ||||||||||||||    
T  7953376 cttgcacaaaacactcgcgccgtgcagccattccgaaaatgcccatgcgctagttaact 7953434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37092627 - 37092669
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  37092627 cttggaagaagctccttgccactggagcccaagcaacttggtt 37092669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39849057 - 39849015
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  39849057 cttggaaggagctccttgccactggagcccaagcgacttggtt 39849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42412896 - 42412938
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  42412896 cttggaaggagctccttgccattggagcccaagcaacttggtt 42412938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 54261211 - 54261169
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  54261211 cttggaaggagctccttgccactggagcccaaacaacttggtt 54261169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30767369 - 30767414
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||    
T  30767369 cttggaaggaactccttgccactggagcccaagcaacttagttaat 30767414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11687231 - 11687275
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  11687231 cttggaaggagcttcttgccactggagcccaaacaacttggttaa 11687275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6462397 - 6462358
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttg 40  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  6462397 cttggaaggagctccttgccactagagcccaagcaacttg 6462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 584
Target Start/End: Complemental strand, 22754805 - 22754766
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaa 584  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  22754805 tgagttaactcacgcaagtgttaattccagcgtgagttaa 22754766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29127904 - 29127861
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||    
T  29127904 cttggaaggatctccttgccactggagcccaaacaacttggtta 29127861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35315941 - 35315898
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||    
T  35315941 cttggaaggagctctttgccactggagcccaaacaacttggtta 35315898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40944868 - 40944825
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||||||| |||||||| | |||||||||||||||||||    
T  40944868 cttggaaggagcttcttgccaccggagcccaagcaacttggtta 40944825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45877439 - 45877396
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||    
T  45877439 cttggaaggggctccttgccactggagcccaaacaacttggtta 45877396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 488
Target Start/End: Complemental strand, 49304157 - 49304090
Alignment:
Q  422 tgctcttc-ccttgcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaac 488  Q
    |||||||| ||| ||||||||||||| | |||||||||||| || |||||| || |||||||||||||    
T  49304157 tgctcttcacctagcacaaaacacttgcaccctgcagccatatccaaaatgcccatgcgctagttaac 49304090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 584
Target Start/End: Complemental strand, 51171127 - 51171088
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaa 584  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  51171127 tgagttaactcacgcacgtgttaatttcagcgtgacttaa 51171088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 51683077 - 51683120
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||    
T  51683077 ttggaaggagctcctcgccactggagcccaaacaacttggttaa 51683120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15320171 - 15320129
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| || |||| ||||||||||    
T  15320171 cttggaaggagctccttgccactggagtccaaacaacttggtt 15320129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29135898 - 29135856
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||    
T  29135898 cttggaagaagctccttgccactggagcccaagcaatttggtt 29135856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32873670 - 32873712
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  32873670 cttggaatgagctccttgccactggagcccaaacaacttggtt 32873712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46529992 - 46530034
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||    
T  46529992 cttgaaaggagctccttgccactggagcccaaacaacttggtt 46530034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47471817 - 47471775
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||| ||||||||  ||||||||||||||||||    
T  47471817 cttggaaggagctctttgccactagagcccaagcaacttggtt 47471775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7310825 - 7310870
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||| ||||||| | ||||||| |||||||||||||    
T  7310825 cttggaaggagctcattgccaccggagcccaatcaacttggttaat 7310870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 590
Target Start/End: Complemental strand, 18360153 - 18360109
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacg 590  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||    
T  18360153 tgagttaactcacgcaggtgt-attttcagcgtgagttaacttacg 18360109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33560845 - 33560808
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaact 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  33560845 cttggaaggagctccttgccactgaagcccaaacaact 33560808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 41630636 - 41630677
Alignment:
Q  3 tggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||| ||||| ||||||| |||||||||||    
T  41630636 tggaaggagctccttgtcactggagcccaaacaacttggtta 41630677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 541 - 622
Target Start/End: Original strand, 36150 - 36231
Alignment:
Q  541 agcatgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    |||||||||||||||||||| ||||||||| |||||||||||| || |||| ||||||||||||||| | | ||||||||||    
T  36150 agcatgagttaactcacgcacgtgttaattccagcgtgagttagctcacgcagcgtgacttaagtcacgtaagtgtaaaaaa 36231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 6e-18; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 562 - 621
Target Start/End: Complemental strand, 33710960 - 33710901
Alignment:
Q  562 gtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaa 621  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  33710960 gtgttaatttcagcgtgagttaactcacgcagcgtgacttaagtcacgcatgtgtaaaaa 33710901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 545 - 630
Target Start/End: Original strand, 3816281 - 3816366
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtcaa 630  Q
    |||||||||| ||||| ||||||||| || |||||||||||| |||| |||||||||||||||  ||| |||||||| ||||||||    
T  3816281 tgagttaacttacgcaggtgttaattacaacgtgagttaactcacgcagcgtgacttaagtcacacatatgtaaaaattaagtcaa 3816366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 573 - 622
Target Start/End: Complemental strand, 26129483 - 26129434
Alignment:
Q  573 agcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  26129483 agcgcgagttaacttatgcggcgtgacttaagtcatgcatgtgtaaaaaa 26129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7747259 - 7747215
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  7747259 cttggaaggagctccttgccactggagcccaagcaacttggttaa 7747215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8410116 - 8410073
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8410116 cttggaaggagctccttgccactggagcccaagcaacttggtta 8410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20612657 - 20612700
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  20612657 cttggaaggagctccttgccactggagcccaagcaacttggtta 20612700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18902651 - 18902693
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  18902651 cttggaaggagctccttgccactggagcccaagcaacttggtt 18902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21180435 - 21180480
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  21180435 cttggaaggagctccttgccactggagcccaaacaacttggttaat 21180480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2550853 - 2550810
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  2550853 cttgtaaggagctccttgccactggagcccaagcaacttggtta 2550810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10026737 - 10026780
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  10026737 cttggaaggagctccttgccattggagcccaagcaacttggtta 10026780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10046597 - 10046640
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  10046597 cttggaaggagctccttgccattggagcccaagcaacttggtta 10046640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22593120 - 22593077
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  22593120 cttggaaggagctccttgccactggagcacaagcaacttggtta 22593077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38005387 - 38005344
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  38005387 cttggaaggagctccttgccactggagcccaaacaacttggtta 38005344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42770772 - 42770815
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||| ||||||||| |||||||||||||||||||    
T  42770772 cttggaaggagctctttgccactggagcccaagcaacttggtta 42770815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44945579 - 44945536
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  44945579 cttggaaggagctccttgccacttgagcccaagcaacttggtta 44945536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 620
Target Start/End: Complemental strand, 19004862 - 19004816
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaa 620  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||    
T  19004862 gcgtgagttaactcatgcggcgtgacttaagtcacgcatgtgtaaaa 19004816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41032026 - 41032068
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  41032026 cttggaaggagctccttgccactggagcccaagcaatttggtt 41032068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 574 - 622
Target Start/End: Complemental strand, 42807521 - 42807473
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    ||||||||||||| | |||||||||||||||||| | ||||||||||||    
T  42807521 gcgtgagttaactcatgcggcgtgacttaagtcacgtatgtgtaaaaaa 42807473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 331486 - 331443
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||    
T  331486 cttggaaagagctcattgccactggagcccaagcaacttggtta 331443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 584
Target Start/End: Complemental strand, 11805064 - 11805021
Alignment:
Q  541 agcatgagttaactcacgcatgtgttaatttcagcgtgagttaa 584  Q
    |||||||||||||||||||||||||||||  ||| |||||||||    
T  11805064 agcatgagttaactcacgcatgtgttaatcccagtgtgagttaa 11805021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 23500803 - 23500846
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||    
T  23500803 ttggaaggagctccttgccaccggagcccaaacaacttggttaa 23500846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 584
Target Start/End: Original strand, 24582538 - 24582577
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaa 584  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  24582538 tgagttaactcacgcaagtgttaattacagcgtgagttaa 24582577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 731
Target Start/End: Original strand, 37058121 - 37058212
Alignment:
Q  640 acacttgcgttaattaattagcacatgggcattttcggaatggctgtaggacgcaagtgttttgtggagggggaagagcaaaaatcatgaaa 731  Q
    ||||||||| || ||||||||| || ||||||||| || ||||||| |||  || |||||||||||  ||| ||||||||||| ||| ||||    
T  37058121 acacttgcgctagttaattagcgcaggggcattttgggcatggctgcagggtgcgagtgttttgtgctgggtgaagagcaaaattcaagaaa 37058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 542
Target Start/End: Original strand, 42882548 - 42882579
Alignment:
Q  511 ttgacttagtttttacacatgcgtgacttaag 542  Q
    ||||||||||||||||||||||||||||||||    
T  42882548 ttgacttagtttttacacatgcgtgacttaag 42882579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3644008 - 3644050
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||    
T  3644008 cttggaatgagctcctttccactggagcccaagcaacttggtt 3644050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37805012 - 37805054
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||    
T  37805012 cttgggaggagttccttgccactgtagcccaagcaacttggtt 37805054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39201629 - 39201671
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||  ||||||| ||||||||||    
T  39201629 cttggaaggagctccttgccactatagcccaatcaacttggtt 39201671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 12864208 - 12864167
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||    
T  12864208 ttggaaggagctccttgtcactggagcccaaacaacttggtt 12864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14853488 - 14853533
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||| |||||| |||||||||||| ||||||| |||||||||||||    
T  14853488 cttgaaaggagttccttgccactggagcccaaacaacttggttaat 14853533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 586
Target Start/End: Original strand, 24582477 - 24582514
Alignment:
Q  549 ttaactcacgcatgtgttaatttcagcgtgagttaact 586  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  24582477 ttaactcacgcaagtgttaattccagcgtgagttaact 24582514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 448 - 489
Target Start/End: Original strand, 29110347 - 29110388
Alignment:
Q  448 cgccctgcagccatttcgaaaatggccctgcgctagttaact 489  Q
    |||||||||| |||||||||||||  ||||||||||||||||    
T  29110347 cgccctgcaggcatttcgaaaatgcacctgcgctagttaact 29110388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 593 - 630
Target Start/End: Complemental strand, 42882585 - 42882548
Alignment:
Q  593 gcgtgacttaagtcatgcatgtgtaaaaaataagtcaa 630  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  42882585 gcgtgacttaagtcacgcatgtgtaaaaactaagtcaa 42882548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 9e-17; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 545 - 630
Target Start/End: Complemental strand, 7130215 - 7130130
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtcaa 630  Q
    ||||| |||||| ||| ||||| ||| ||||||||||||||| |||| ||||||||||||||| |||||| |||||| ||||||||    
T  7130215 tgagtaaactcatgcaagtgttcattccagcgtgagttaactcacgcagcgtgacttaagtcacgcatgtataaaaactaagtcaa 7130130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 542 - 628
Target Start/End: Original strand, 39872150 - 39872236
Alignment:
Q  542 gcatgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtc 628  Q
    ||||||||||||||||| |  |||||||||| | ||||||||||| | || |||||||||||||||  |||||||||||| ||||||    
T  39872150 gcatgagttaactcacgtaaatgttaatttctgtgtgagttaactcatgcagcgtgacttaagtcacacatgtgtaaaaattaagtc 39872236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 513 - 586
Target Start/End: Original strand, 13461190 - 13461271
Alignment:
Q  513 gacttagtttttacacatgcgtgacttaag--------catgagttaactcacgcatgtgttaatttcagcgtgagttaact 586  Q
    ||||||||||||||||||||||||||||||        |  ||||||||||||||| |||||||||||||||||||||||||    
T  13461190 gacttagtttttacacatgcgtgacttaagtcacgccacgcgagttaactcacgcacgtgttaatttcagcgtgagttaact 13461271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 45156344 - 45156416
Alignment:
Q  549 ttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaa 621  Q
    ||||||||  |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||    
T  45156344 ttaactcattcatgtgttaattccagcgtgagataactcaagcagcgtgacttaagtcacgcatgtgtaaaaa 45156416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 558 - 621
Target Start/End: Complemental strand, 1797811 - 1797748
Alignment:
Q  558 gcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaa 621  Q
    |||||||||||||  || |||||||||||||||| |||||||||||||||  ||||||||||||    
T  1797811 gcatgtgttaattctagggtgagttaacttacgcagcgtgacttaagtcacacatgtgtaaaaa 1797748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2467239 - 2467281
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  2467239 cttggaaggagctccttgccactggagcccaagcaacttggtt 2467281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24837231 - 24837189
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  24837231 cttggaaggagctccttgccactggagcccaagcaacttggtt 24837189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38922535 - 38922577
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  38922535 cttggaaggagctccttgccactggagcccaagcaacttggtt 38922577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14666192 - 14666237
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  14666192 cttggaatgagctccttgccactggagcccaagcaacttggttaat 14666237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44893399 - 44893442
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  44893399 cttggaaggagctccttgccactggagcccaaacaacttggtta 44893442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 628
Target Start/End: Complemental strand, 13461244 - 13461190
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtc 628  Q
    |||||||||||||  || |||||||||||||||| ||||||||||||| ||||||    
T  13461244 gcgtgagttaactcgcgtggcgtgacttaagtcacgcatgtgtaaaaactaagtc 13461190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17981430 - 17981392
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaactt 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17981430 cttggaaggagctccttgccactggagcccaagcaactt 17981392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1013098 - 1013143
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||    
T  1013098 cttggaaaaagctccttgccactggagcccaagcaacttggttaat 1013143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8141091 - 8141046
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||    
T  8141091 cttggaagcagctccttgccactggagcccaaacaacttggttaat 8141046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 13359010 - 13358969
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  13359010 ttggaaggagctccttaccactgaagcccaagcaacttggtt 13358969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 15892151 - 15892216
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgc 610  Q
    ||||||||||||||   |||||||| || ||||||||||||| |||| ||||||||||| ||||||    
T  15892151 tgagttaactcacgttagtgttaatctctgcgtgagttaactaacgcagcgtgacttaactcatgc 15892216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10927595 - 10927551
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||    
T  10927595 cttgaaagaagctccttgccactgaagcccaagcaacttggttaa 10927551  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22810069 - 22810025
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||    
T  22810069 cttggaaggagctccttgccactagagcccaaacaacttggttaa 22810025  T

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Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34846803 - 34846759
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaa 45  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||    
T  34846803 cttggaatgagctccttgccactggagcccaaacaacttggttaa 34846759  T

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Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 45156074 - 45156018
Alignment:
Q  571 tcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagt 627  Q
    |||||||||||||||| | || |||||| |||||||| ||||||||||||| |||||    
T  45156074 tcagcgtgagttaactcatgcagcgtgatttaagtcacgcatgtgtaaaaattaagt 45156018  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6100461 - 6100418
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||    
T  6100461 cttgaaaggagctccttgccactgaagcccaaacaacttggtta 6100418  T

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Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7673775 - 7673817
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  7673775 cttggaaggagctccttgccactggag-ccaagcaacttggtta 7673817  T

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Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24938683 - 24938726
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||    
T  24938683 cttggagggagctccttgccactggagcccaaacaacttggtta 24938726  T

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Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 628
Target Start/End: Original strand, 42432014 - 42432097
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtc 628  Q
    |||||||| |||||||||||||||   | ||||||||||||| | |  ||||||||||| ||| |||| |||||||| ||||||    
T  42432014 tgagttaattcacgcatgtgttaacacctgcgtgagttaactcatgtagcgtgacttaaatcacgcatatgtaaaaattaagtc 42432097  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 574 - 628
Target Start/End: Original strand, 7130616 - 7130670
Alignment:
Q  574 gcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtc 628  Q
    ||||||||||||| | || ||||||||||||||| ||||| ||||||| ||||||    
T  7130616 gcgtgagttaactcatgcagcgtgacttaagtcacgcatgcgtaaaaactaagtc 7130670  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10535524 - 10535566
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| || |||| ||||||||||    
T  10535524 cttggaaggagctccttgccactggagtccaaacaacttggtt 10535566  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15884676 - 15884718
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||    
T  15884676 cttggaaggagctccttaccactggagcccaatcaacttggtt 15884718  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17845722 - 17845680
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  17845722 cttggaaggagctcattgccactggagcccaaacaacttggtt 17845680  T

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Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 780 - 842
Target Start/End: Original strand, 28812776 - 28812838
Alignment:
Q  780 tggtatgtgcaaataaatgtagttatttgcagcagttgaattgtgattttctgcacctttgct 842  Q
    ||||| ||||| ||| |||||||| ||||| | ||||| |||||||||||| |||||||||||    
T  28812776 tggtaagtgcatatatatgtagttctttgctgtagttggattgtgattttccgcacctttgct 28812838  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 434 - 500
Target Start/End: Complemental strand, 42183636 - 42183570
Alignment:
Q  434 gcacaaaacactttcgccctgcagccatttcgaaaatggccctgcgctagttaacttacgcaagtgt 500  Q
    ||||||||||||  | |||||||||||| || |||||| || ||||||||||||||  |||||||||    
T  42183636 gcacaaaacactcgcaccctgcagccatgtccaaaatgtccatgcgctagttaactagcgcaagtgt 42183570  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45521158 - 45521116
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||| || ||||||||||||| ||||||||||||||||||    
T  45521158 cttggaatgaactccttgccactggagcccaagcaacttggtt 45521116  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 16893925 - 16893884
Alignment:
Q  2 ttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||| |||||||||||  ||||||||||||||||||    
T  16893925 ttggaaggagttccttgccactatagcccaagcaacttggtt 16893884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 568
Target Start/End: Original strand, 32077009 - 32077038
Alignment:
Q  539 taagcatgagttaactcacgcatgtgttaa 568  Q
    ||||||||||||||||||||||||||||||    
T  32077009 taagcatgagttaactcacgcatgtgttaa 32077038  T

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Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 553 - 622
Target Start/End: Complemental strand, 49295 - 49226
Alignment:
Q  553 ctcacgcatgtgttaatttcagcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaa 622  Q
    |||||||| ||||||||| | | ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  49295 ctcacgcaagtgttaattcctgtgtgagttaactcatgcggcgtgatttaagtcatgcatgtgtaaaaaa 49226  T

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Target: scaffold0027; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 640 - 719
Target Start/End: Complemental strand, 49200 - 49121
Alignment:
Q  640 acacttgcgttaattaattagcacatgggcattttcggaatggctgtaggacgcaagtgttttgtggagggggaagagca 719  Q
    ||||||||||||||||| ||| |||| || ||||| |||||| ||| ||| ||| |||||||||||  ||||||||||||    
T  49200 acacttgcgttaattaactaggacataggtatttttggaatgcctgcagggcgcgagtgttttgtgccgggggaagagca 49121  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8831 - 8873
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  8831 cttggaaggagctccttgccactggagcccaaacaacttggtt 8873  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 250134 - 250176
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  250134 cttggaatgagctccttgccactggagcccaagcaacttggtt 250176  T

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Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 271195 - 271237
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    ||||||||||||||||||||||   ||||||||||||||||||    
T  271195 cttggaaggagctccttgccaccagagcccaagcaacttggtt 271237  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 558 - 516
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  558 cttggaaggagctccttgccactagagcccaagcaacttggtt 516  T

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Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 412147 - 412190
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtta 44  Q
    |||||||||||||| | ||||||| |||||||||||||||||||    
T  412147 cttggaaggagctcatcgccactgaagcccaagcaacttggtta 412190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1107 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1107
Description:

Target: scaffold1107; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 573 - 629
Target Start/End: Original strand, 1920 - 1976
Alignment:
Q  573 agcgtgagttaacttacgcggcgtgacttaagtcatgcatgtgtaaaaaataagtca 629  Q
    |||||||||||||| ||||  |||||||||||||| |||| |||||||| |||||||    
T  1920 agcgtgagttaactcacgcaacgtgacttaagtcacgcatctgtaaaaactaagtca 1976  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 41030 - 40990
Alignment:
Q  3 tggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  41030 tggaaggagctccttgccactggagcccaaacaacttggtt 40990  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 68505 - 68463
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggtt 43  Q
    |||||||||||||||||||||||  ||||||| ||||||||||    
T  68505 cttggaaggagctccttgccactagagcccaaacaacttggtt 68463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5961 - 5916
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||| ||||||||||||||||||  | |||||||||||||||||||    
T  5961 cttgaaaggagctccttgccactagaacccaagcaacttggttaat 5916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 590
Target Start/End: Original strand, 23244 - 23288
Alignment:
Q  545 tgagttaactcacgcatgtgttaatttcagcgtgagttaacttacg 590  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  23244 tgagtgaactcacgcatgtgt-aatttcaacgtgagttaacttacg 23288  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25905 - 25950
Alignment:
Q  1 cttggaaggagctccttgccactgcagcccaagcaacttggttaat 46  Q
    |||||||||||||| |||| |||| ||||||| |||||||||||||    
T  25905 cttggaaggagctctttgctactggagcccaaacaacttggttaat 25950  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 612
Target Start/End: Original strand, 232390 - 232427
Alignment:
Q  575 cgtgagttaacttacgcggcgtgacttaagtcatgcat 612  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  232390 cgtgagttaactcacgcggcgtgacttaagtcacgcat 232427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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