View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20519_low_30 (Length: 315)
Name: NF20519_low_30
Description: NF20519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20519_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 18 - 304
Target Start/End: Complemental strand, 1908699 - 1908417
Alignment:
| Q |
18 |
caacataaacatagctgattaaatcatcatataaatgatgcattaacatgaaggaacatatcaacttattcagaaaaacatgaacacaaaagtaaatatt |
117 |
Q |
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| T |
1908699 |
caacataaacatagctgattaaatcatcatataaatgatgcattaacatgaaggaacatatcaacttattcagaaaaacatgaacacaaaagtaaatatt |
1908600 |
T |
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| Q |
118 |
aaaaactaaacacgaagctctaaagaacgaagcgtatgttaagcctattaataaatcatgaagctctaaagaatgaagcatggaaggttggaatgacaga |
217 |
Q |
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||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1908599 |
aaaaactaaacacgaagctctaaagaa----gcatatgttaagcctattgataaatcatgaagctctaaagaatgaagcatggaaggttggaatgacaga |
1908504 |
T |
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| Q |
218 |
agaagtagaaactattgaaaggaacaatacatggaaacttagggtgtataagtcgaacaaattatactattgaactatgtagtataa |
304 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1908503 |
agaagtagaaactattgaaaggaacaatacatggaaacttagggtgtataagtcgaacaaattatactattgaactatgtagtataa |
1908417 |
T |
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