View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20519_low_50 (Length: 243)
Name: NF20519_low_50
Description: NF20519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20519_low_50 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 30781066 - 30780841
Alignment:
| Q |
1 |
cgtcctctatcatgaaatacactttaagtgaaggtttcatctttccttgattttcgatataaacaatgaaatcaaaacaaccccagaagatataccatta |
100 |
Q |
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| T |
30781066 |
cgtcctctatcatgaaatacactttaagtgaaggtttcatctttccttgattttcgatataaacaatgaaatcaaaacaaccccagaagatataccatta |
30780967 |
T |
|
| Q |
101 |
cattctcaaaagggtatccaaaaacatcataaagttgaaaacttgcaaacctcaggagaaggaaggtaacgccaaagagcaagtttccaatcggagtttg |
200 |
Q |
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| T |
30780966 |
cattcgcaaaagggtatccaaaaacatcataaagttgaaaacttgcaaacctcaggagaaggaaggtaacgccaaagagcaagtttccaatcggagtttg |
30780867 |
T |
|
| Q |
201 |
gaatactgatatggtgcagttcatcg |
226 |
Q |
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|||||||||||||||| ||||||||| |
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| T |
30780866 |
gaatactgatatggtgaagttcatcg |
30780841 |
T |
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